Jatropha Genome Database

JcCA0155101.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155101.10 + phase: 0 
         (113 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68500.1 | Symbols:  | unknown protein | chr1:25702041-257023...    59   6e-10
AT1G25422.1 | Symbols:  | unknown protein | chr1:8919087-8919410...    53   3e-08

>AT1G68500.1 | Symbols:  | unknown protein | chr1:25702041-25702322
           FORWARD
          Length = 93

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 35/47 (74%)

Query: 63  GVVDEQMSWGSIWLPFWDVEYMGEACSEMFSDVVWDYDIWNLKSIQQ 109
           G V E+++W S+WLPFWDVE++G     +F+DVVWD DIWN+ ++  
Sbjct: 45  GGVVEEITWSSVWLPFWDVEFVGRNYGVLFNDVVWDDDIWNIHNLTH 91


>AT1G25422.1 | Symbols:  | unknown protein | chr1:8919087-8919410
           FORWARD
          Length = 107

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 1/48 (2%)

Query: 63  GVVDEQMSWGSIWLPF-WDVEYMGEACSEMFSDVVWDYDIWNLKSIQQ 109
           GVVDE M+W ++WLP  WDVE++ +    +++DVVWD D+WNL +  Q
Sbjct: 54  GVVDELMTWNTVWLPSCWDVEFVEKNYGVLYNDVVWDDDLWNLNTSTQ 101