Jatropha Genome Database

JcCA0155091.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155091.20 - phase: 0 
         (252 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60910.1 | Symbols:  | catalytic/ methyltransferase | chr3:22...   362   e-100
AT3G17365.1 | Symbols:  | catalytic/ methyltransferase | chr3:59...   202   2e-52
AT4G34360.1 | Symbols:  | protease-related | chr4:16432011-16433...    97   9e-21
AT2G31740.1 | Symbols:  | methyltransferase | chr2:13491053-1349...    86   2e-17
AT1G66680.1 | Symbols: AR401 | AR401 | chr1:24866352-24868888 RE...    61   7e-10

>AT3G60910.1 | Symbols:  | catalytic/ methyltransferase |
           chr3:22501727-22503182 FORWARD
          Length = 252

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/252 (69%), Positives = 205/252 (81%), Gaps = 2/252 (0%)

Query: 1   MYRDVSSCNTYNYGDSLYWDARYVQEAGSFDWYQRYSSLRPFVRRYIPTSSRVLMVGCGN 60
           M RDVSSCNTYNYGD+LYWDARYVQ+A SFDWYQ YSSLRPFVR ++ TSSRVLMVGCGN
Sbjct: 1   MQRDVSSCNTYNYGDALYWDARYVQDALSFDWYQCYSSLRPFVRSFVSTSSRVLMVGCGN 60

Query: 61  ALMSEDMVKDGYEDITNIDISSVAIDMMRKKYEHIPQLKYMRMDVRDMXXXXXXXXXXVI 120
           +LMSEDMVKDGYEDI N+DISSVAI+MM+ KY  +PQLKYM+MDVRDM          +I
Sbjct: 61  SLMSEDMVKDGYEDIMNVDISSVAIEMMQTKYASVPQLKYMQMDVRDMSYFEDDSFDTII 120

Query: 121 DKGTLDSLMCGNDAPISAAQMLGEVSRLLKPGGIHMLITYGDPTVRMLHLSQPVYNWKIV 180
           DKGTLDSLMCG+DA +SA++MLGEVSRL+KPGG + LITYGDP VRM HL++  YNWKI 
Sbjct: 121 DKGTLDSLMCGSDALLSASRMLGEVSRLIKPGGTYFLITYGDPKVRMPHLTRSAYNWKIS 180

Query: 181 LYIIPRPGFERPAGGSSS-RSFLEPVPITENGLLRADFILEDPDSHFIYVCKKMDETTDL 239
           LYIIPRPGF+RP   SSS +S +E +PIT  G+L  D++LEDPDSHFIY+CKK DE  + 
Sbjct: 181 LYIIPRPGFKRPESCSSSAKSCMEAIPITSEGMLPHDYVLEDPDSHFIYICKKKDEDEEA 240

Query: 240 HSITHCPLTADV 251
              ++ PL  DV
Sbjct: 241 QLPSY-PLMEDV 251


>AT3G17365.1 | Symbols:  | catalytic/ methyltransferase |
           chr3:5947144-5948766 REVERSE
          Length = 239

 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 105/233 (45%), Positives = 148/233 (63%), Gaps = 4/233 (1%)

Query: 10  TYNYGDSLYWDARYVQEAGSFDWYQRYSSLRPFVRRYIPT-SSRVLMVGCGNALMSEDMV 68
           T +Y +  YWD RY  E+  FDWYQ+YS L P +  Y+P  + RVL++GCGN+  SE MV
Sbjct: 7   TQSYSEQWYWDDRYKNESEPFDWYQKYSPLAPLINLYVPQRNQRVLVIGCGNSAFSEGMV 66

Query: 69  KDGYEDITNIDISSVAIDMMRKKYEHIPQLKYMRMDVRDMXXXXXXXXXXVIDKGTLDSL 128
            DGYED+ +IDISSV ID M KKY   PQLKY++MDVRDM          VIDKGTLDS+
Sbjct: 67  DDGYEDVVSIDISSVVIDTMIKKYSDRPQLKYLKMDVRDMKAFEDASFDAVIDKGTLDSI 126

Query: 129 MCGNDAPISAAQMLGEVSRLLKPGGIHMLITYGDPTVRMLHLSQPVYNWKIVLYIIPRPG 188
           +CG+++   + QML EV R+LK  G+++LITYG P  R L L +   +W   L++I +  
Sbjct: 127 LCGSNSRQYSTQMLEEVWRVLKDKGVYILITYGAPIYR-LRLFKESCSWTTKLHVIDKSL 185

Query: 189 FERPAGGSSSRSFLEPVPITENGLLRADFILEDPDSHFIYVCKKMDETTDLHS 241
            ++P   +      +P+P+  +G      I ++PD H+IYVC K DE++ + +
Sbjct: 186 TDQPL-DTPKWELTKPLPLDADGSSVESAIGKNPDVHYIYVCIK-DESSKMEA 236


>AT4G34360.1 | Symbols:  | protease-related | chr4:16432011-16433752
           FORWARD
          Length = 248

 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 12/177 (6%)

Query: 13  YGDSLYWDARYVQEAGSFDWYQRYSSLRPFVRRYIPTSSRVLMVGCGNALMSEDMVKDGY 72
           Y D  YWD R+  E   ++W++ YS  +  +   I  SS VL +GCGN+ + E++ KDG 
Sbjct: 15  YLDPHYWDERFSSEE-HYEWFKDYSHFQHLIISNIKPSSSVLELGCGNSQLCEELYKDGI 73

Query: 73  EDITNIDISSVAIDMMRKKY--EHIPQLKYMRMDVRDMXXXXXXXXXXVIDKGTLDSLMC 130
            DIT ID+SSVA++ M+ +   +   ++K ++ D+ D+          VI+KGT+D L  
Sbjct: 74  VDITCIDLSSVAVEKMQSRLLPKGYKEIKVVQADMLDL-PFDSESFDVVIEKGTMDVLFV 132

Query: 131 G-----NDAPISAAQMLGE---VSRLLKPGGIHMLITYGDPTVRMLHLSQPVYNWKI 179
                 N  P + ++++     V R+LKP GI + IT+G P  R      P + W +
Sbjct: 133 DAGDPWNPRPETVSKVMATLDGVHRVLKPDGIFISITFGQPHFRRPLFKDPKFTWSM 189


>AT2G31740.1 | Symbols:  | methyltransferase |
           chr2:13491053-13495009 REVERSE
          Length = 760

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 11/178 (6%)

Query: 19  WDARYVQEAG--SFDWYQRYSSLR-------PFVRRYIPTSSRVLMVGCGNALMSEDMVK 69
           WD  +       SF+WY  +  L                 S ++L+ GCGN+ ++E +  
Sbjct: 29  WDKFFTLRGNDDSFEWYAEWPQLHDSLLPLLQDSSSSSSDSLQILVPGCGNSRLTEHLYD 88

Query: 70  DGYEDITNIDISSVAI-DMMRKKYEHIPQLKYMRMDVRDMXXXXXXXXXXVIDKGTLDSL 128
            G+ DITN+D S V I DM+R+     P+L++  MD+  M          V+DKG LD+L
Sbjct: 89  AGFRDITNVDFSKVVISDMLRRNIRTRPELRWRVMDITKM-QLADESFDTVLDKGALDAL 147

Query: 129 MCGNDAPISAAQMLGEVSRLLKPGGIHMLITYGDPTVRMLHLSQPVYNWKIVLYIIPR 186
           M          Q L E  R+LKPGG  + +T  +  V  L  S+  + WK+ ++ I +
Sbjct: 148 MEPEVGTKLGNQYLSEAKRVLKPGGKFICLTLAESHVLALLFSRFRFGWKMNVHSIAQ 205


>AT1G66680.1 | Symbols: AR401 | AR401 | chr1:24866352-24868888
           REVERSE
          Length = 358

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)

Query: 49  TSSRVLMVGCGNALMSEDMVKDGYEDITNIDISSVAIDMMR--KKYEHIPQLKYMRMDVR 106
           +S  VL +G GN L+   + K+G+ D+T  D S  A+++ +   + +  P +++M  D+ 
Sbjct: 169 SSWNVLDLGTGNGLLLHQLAKEGFSDLTGTDYSDGAVELAQHLSQRDGFPNIRFMVDDIL 228

Query: 107 DMXXXXXXXXXXVIDKGTLDSLMCGNDAPISAAQMLGEVSRLLKPGGIHMLITYGDPTVR 166
           D           V+DKGTLD++    D P+        VS+L+ PGGI ++IT  + T  
Sbjct: 229 DTKLEQQFKL--VMDKGTLDAIGLHPDGPVKRVMYWDSVSKLVAPGGI-LVITSCNHTKD 285

Query: 167 MLHLSQPVYNWKI 179
              L + V N+ I
Sbjct: 286 --ELVEEVENFNI 296