Jatropha Genome Database

JcCA0155011.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155011.40 + phase: 0 
         (133 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01910.1 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);...   225   5e-60
AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE...    75   1e-14
AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |...    75   1e-14
AT3G01910.2 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);...    61   2e-10

>AT3G01910.1 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);
           sulfite oxidase | chr3:314919-317274 REVERSE
          Length = 393

 Score =  225 bits (574), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 104/127 (81%), Positives = 117/127 (92%)

Query: 1   MPGIEGPSDYAQEPPRHPSLKINSKQPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVD 60
           MPGI GPS+Y+QEPPRHPSLK+N+K+PFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVD
Sbjct: 1   MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVD 60

Query: 61  DIERYSVTISGLIDRPRELFMKDIWKLPKYNVTATLQCAGNRRTAMSNVRKVRGVGWDVS 120
            ++ YSVT++GLI  PR+LF+KDI  LPKYNVTATLQCAGNRRTAMS VR VRGVGWDVS
Sbjct: 61  HLQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVS 120

Query: 121 AIGNGLF 127
           AIGN ++
Sbjct: 121 AIGNAVW 127


>AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE
           1); nitrate reductase | chr1:29236005-29239367 REVERSE
          Length = 917

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)

Query: 20  LKINSKQPFNAEPPRSALVS-SYVTPVDLFYKRNHGPIPIVDDIERYSVTISGLIDRPRE 78
           L++  K PFNAE P   L+   ++TPV L Y RNHG +P  +    +S+ I+GL+ RP +
Sbjct: 118 LRLTGKHPFNAEAPLPRLMHHGFITPVPLHYVRNHGAVPKAN-WSDWSIEITGLVKRPAK 176

Query: 79  LFMKD-IWKLPKYNVTATLQCAGNRRTAMSNVRKVRGVGWDVSAIGNGLFLPI 130
             M++ I + P      TL CAGNRR   + V++  G  W  + +   L+  I
Sbjct: 177 FTMEELISEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGSAGVSTSLWKGI 229


>AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |
           NIA2 (NITRATE REDUCTASE 2); nitrate reductase (NADH)/
           nitrate reductase | chr1:14158617-14161652 FORWARD
          Length = 917

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 6/123 (4%)

Query: 16  RHPSL-KINSKQPFNAEPPRSALVS-SYVTPVDLFYKRNHGPIPIVDDIERYSVTISGLI 73
           R+PS+ ++  K PFN+E P + L+   ++TPV L Y RNHG +P     E ++V ++G +
Sbjct: 107 RNPSMVRLTGKHPFNSEAPLNRLMHHGFITPVPLHYVRNHGHVPKAQWAE-WTVEVTGFV 165

Query: 74  DRPRELFMKDIWKLPKY-NVTATLQCAGNRRTAMSNVRKVRGVGWDVSAIGNGLF--LPI 130
            RP +  M  +     Y    ATL CAGNRR   + V+K +G  W  + +   ++  +P+
Sbjct: 166 KRPMKFTMDQLVSEFAYREFAATLVCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPL 225

Query: 131 LDL 133
            D+
Sbjct: 226 CDV 228


>AT3G01910.2 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);
           sulfite oxidase | chr3:314919-316641 REVERSE
          Length = 298

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 29/32 (90%)

Query: 96  LQCAGNRRTAMSNVRKVRGVGWDVSAIGNGLF 127
           +QCAGNRRTAMS VR VRGVGWDVSAIGN ++
Sbjct: 1   MQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVW 32