Jatropha Genome Database
- JcCA0155011.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0155011.30 - phase: 0
(382 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G14150.1 | Symbols: | unknown protein | chr5:4565246-4566653... 386 e-107
AT5G11420.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 162 2e-40
AT4G32460.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 162 3e-40
AT4G32460.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 162 3e-40
AT5G25460.1 | Symbols: | unknown protein | chr5:8863430-8865394... 158 5e-39
AT2G34510.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 154 6e-38
AT1G80240.1 | Symbols: | unknown protein | chr1:30171520-301727... 149 2e-36
AT2G41800.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 146 3e-35
AT2G41810.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 145 3e-35
AT1G29980.1 | Symbols: | INVOLVED IN: biological_process unknow... 144 1e-34
AT1G29980.2 | Symbols: | INVOLVED IN: biological_process unknow... 143 2e-34
AT3G08030.1 | Symbols: | unknown protein | chr3:2564191-2565819... 139 3e-33
AT3G08030.2 | Symbols: | unknown protein | chr3:2564517-2565819... 134 7e-32
>AT5G14150.1 | Symbols: | unknown protein | chr5:4565246-4566653
REVERSE
Length = 383
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/378 (54%), Positives = 267/378 (70%), Gaps = 14/378 (3%)
Query: 10 LLFIGAVFADLLQNSDFETPPLNIPKNSSIPFQLLNQNTTIPGWSFEGTVLYVTATDTIA 69
LL +D L+N DFE+PPLN+P NS+ L+QN+T+PGW+F+GTVLYV
Sbjct: 12 LLVSCCASSDFLENPDFESPPLNLPTNSNASSVSLDQNSTLPGWTFQGTVLYV------E 65
Query: 70 LPGNGHAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSNASVGVSASDRPSVF 129
LP GHA+QLG+DGKINQTF D ++Y+LTF+L G NC+S+A + VS D +VF
Sbjct: 66 LPDTGHAVQLGEDGKINQTFIAKGDELNYILTFAL-IHAGQNCTSSAGLSVSGPDSNAVF 124
Query: 130 FFKQNYGKEKWESYGVYLGSWELEEKINLVIESEA--TESDGNETCWPLIDKLLLKSIE- 186
++QNY K W+SY LGSW E INLV+ES+A ++SD N TCWP+ID LL+K++
Sbjct: 125 SYRQNYSKVSWQSYSHNLGSWGNGEPINLVLESQAIDSDSDTNSTCWPIIDTLLIKTVGV 184
Query: 187 TLVPSNDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWSITGTVKYIDSKNYF 246
TLV + NLL+NGGFE GP F NS++G+L+D VP+ + SPLR WS+ GTV+YIDS+++
Sbjct: 185 TLVQDSGNLLINGGFESGPGFLPNSTDGVLIDAVPSLIQSPLRQWSVIGTVRYIDSEHFH 244
Query: 247 VPEGNAAVEIVSGVS-AGIQAATTLT-EGSTYNLEFTLGDANDSCEGNFVVGAQAGFAAQ 304
VPEG AA+EI+S + +GIQ AT T EGS YNL FTLGDAND+C G+FVVGAQAG Q
Sbjct: 245 VPEGKAAIEILSNTAPSGIQTATKGTSEGSRYNLTFTLGDANDACRGHFVVGAQAGSVTQ 304
Query: 305 NFTLLSNGTGSATKKSLEFKADSSIALISFTAYTTTQTKDGVFCGPVVDNIVLRASNGMK 364
NFTL SNGTGS K L F+AD A ISFT+Y+ T TK+ V CGPV+D +++ G
Sbjct: 305 NFTLESNGTGSGEKFGLVFEADKDAAQISFTSYSVTMTKENVVCGPVIDEVMVHPLGGTA 364
Query: 365 SAM-KWGILI-SLLFLAV 380
S W +LI +LL++AV
Sbjct: 365 SVKPTWLLLIFALLYVAV 382
>AT5G11420.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cell wall, plant-type cell wall; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF642
(InterPro:IPR006946), Galactose-binding like
(InterPro:IPR008979); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G25460.1); Has 185
Blast hits to 157 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 185;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:3644655-3646991 FORWARD
Length = 366
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 170/354 (48%), Gaps = 29/354 (8%)
Query: 17 FAD-LLQNSDFETPPLNIPKNSSIPFQLLNQNTTIPGWSFEGTVLYVTATDT-----IAL 70
F+D +L N DFE P K S + + IP W G V Y+ + + +
Sbjct: 23 FSDGMLPNGDFELGP----KPSDMKGTQVINKKAIPSWELSGFVEYIKSGQKQGDMLLVV 78
Query: 71 PGNGHAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSNASVGVSASDRPSVFF 130
P AI+LG + I Q + + ++Y LTFS A + C+ + + +S + V
Sbjct: 79 PAGKFAIRLGNEASIKQRLNVTKG-MYYSLTFSAART----CAQDERLNISVAPDSGVIP 133
Query: 131 FKQNYGKEKWESYGVYLGSWELEEKIN---LVIESEATESDGNETCWPLIDKLLLKSIET 187
+ Y W+ Y +W + + N +VI + E D C PLID + +K++
Sbjct: 134 IQTVYSSSGWDLY-----AWAFQAESNVAEIVIHNPGEEED--PACGPLIDGVAIKALYP 186
Query: 188 LVPSNDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWSITG--TVKYIDSKNY 245
P+N N+L NGGFE GP N++ G+L+ P SPL W + +KY+D +++
Sbjct: 187 PRPTNKNILKNGGFEEGPYVLPNATTGVLVPPFIEDDHSPLPAWMVESLKAIKYVDVEHF 246
Query: 246 FVPEGNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGDANDSCEGNFVVGAQAGFAAQN 305
VP+G AVE+V+G + I G TY L F +GDAN++C+G+ VV A AG
Sbjct: 247 SVPQGRRAVELVAGKESAIAQVARTVVGKTYVLSFAVGDANNACQGSMVVEAFAGKDTLK 306
Query: 306 FTLLSNGTGSATKKSLEFKADSSIALISF--TAYTTTQTKDGVFCGPVVDNIVL 357
S G G + SL F A S+ + F T Y+ CGPV+D++ L
Sbjct: 307 VPYESRGKGGFKRASLRFVAVSTRTRVMFYSTFYSMRSDDFSSLCGPVIDDVKL 360
>AT4G32460.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF642
(InterPro:IPR006946), Galactose-binding like
(InterPro:IPR008979); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G11420.1); Has 182
Blast hits to 158 proteins in 12 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 180;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:15663036-15664859 REVERSE
Length = 365
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 177/375 (47%), Gaps = 34/375 (9%)
Query: 1 MHKATVVVPLL-----FIGAVFAD-LLQNSDFETPPLNIPKNSSIPFQLLNQNTTIPGWS 54
M + V+V LL ++ F D LL N DFE P ++S + + T IP W
Sbjct: 1 MKEMGVIVLLLLHSFFYVAFCFNDGLLPNGDFELGP----RHSDMKGTQVINITAIPNWE 56
Query: 55 FEGTVLYVTATDT-----IALPGNGHAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGG 109
G V Y+ + + +P A++LG + I Q S +Y +TFS A +
Sbjct: 57 LSGFVEYIPSGHKQGDMILVVPKGAFAVRLGNEASIKQKISVKKGS-YYSITFSAART-- 113
Query: 110 SNCSSNASVGVSASDRPSVFFFKQNYGKEKWESYGVYLGSWELEEK---INLVIESEATE 166
C+ + + VS + +V + Y W+ Y SW + + ++VI + E
Sbjct: 114 --CAQDERLNVSVAPHHAVMPIQTVYSSSGWDLY-----SWAFKAQSDYADIVIHNPGVE 166
Query: 167 SDGNETCWPLIDKLLLKSIETLVPSNDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLS 226
D C PLID + ++++ P+N N+L NGGFE GP N S G+L+ P S
Sbjct: 167 ED--PACGPLIDGVAMRALFPPRPTNKNILKNGGFEEGPWVLPNISSGVLIPPNSIDDHS 224
Query: 227 PLRHWSITG--TVKYIDSKNYFVPEGNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGD 284
PL W + VKYIDS ++ VP+G AVE+V+G + + G TY L F++GD
Sbjct: 225 PLPGWMVESLKAVKYIDSDHFSVPQGRRAVELVAGKESAVAQVVRTIPGKTYVLSFSVGD 284
Query: 285 ANDSCEGNFVVGAQAGFAAQNFTLLSNGTGSATKKSLEFKADSSIALISF--TAYTTTQT 342
A+++C G+ +V A AG S G G + SL F A SS + F T Y
Sbjct: 285 ASNACAGSMIVEAFAGKDTIKVPYESKGKGGFKRSSLRFVAVSSRTRVMFYSTFYAMRND 344
Query: 343 KDGVFCGPVVDNIVL 357
CGPV+D++ L
Sbjct: 345 DFSSLCGPVIDDVKL 359
>AT4G32460.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF642
(InterPro:IPR006946), Galactose-binding like
(InterPro:IPR008979); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G11420.1); Has 182
Blast hits to 158 proteins in 12 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 180;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:15663036-15664859 REVERSE
Length = 365
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 177/375 (47%), Gaps = 34/375 (9%)
Query: 1 MHKATVVVPLL-----FIGAVFAD-LLQNSDFETPPLNIPKNSSIPFQLLNQNTTIPGWS 54
M + V+V LL ++ F D LL N DFE P ++S + + T IP W
Sbjct: 1 MKEMGVIVLLLLHSFFYVAFCFNDGLLPNGDFELGP----RHSDMKGTQVINITAIPNWE 56
Query: 55 FEGTVLYVTATDT-----IALPGNGHAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGG 109
G V Y+ + + +P A++LG + I Q S +Y +TFS A +
Sbjct: 57 LSGFVEYIPSGHKQGDMILVVPKGAFAVRLGNEASIKQKISVKKGS-YYSITFSAART-- 113
Query: 110 SNCSSNASVGVSASDRPSVFFFKQNYGKEKWESYGVYLGSWELEEK---INLVIESEATE 166
C+ + + VS + +V + Y W+ Y SW + + ++VI + E
Sbjct: 114 --CAQDERLNVSVAPHHAVMPIQTVYSSSGWDLY-----SWAFKAQSDYADIVIHNPGVE 166
Query: 167 SDGNETCWPLIDKLLLKSIETLVPSNDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLS 226
D C PLID + ++++ P+N N+L NGGFE GP N S G+L+ P S
Sbjct: 167 ED--PACGPLIDGVAMRALFPPRPTNKNILKNGGFEEGPWVLPNISSGVLIPPNSIDDHS 224
Query: 227 PLRHWSITG--TVKYIDSKNYFVPEGNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGD 284
PL W + VKYIDS ++ VP+G AVE+V+G + + G TY L F++GD
Sbjct: 225 PLPGWMVESLKAVKYIDSDHFSVPQGRRAVELVAGKESAVAQVVRTIPGKTYVLSFSVGD 284
Query: 285 ANDSCEGNFVVGAQAGFAAQNFTLLSNGTGSATKKSLEFKADSSIALISF--TAYTTTQT 342
A+++C G+ +V A AG S G G + SL F A SS + F T Y
Sbjct: 285 ASNACAGSMIVEAFAGKDTIKVPYESKGKGGFKRSSLRFVAVSSRTRVMFYSTFYAMRND 344
Query: 343 KDGVFCGPVVDNIVL 357
CGPV+D++ L
Sbjct: 345 DFSSLCGPVIDDVKL 359
>AT5G25460.1 | Symbols: | unknown protein | chr5:8863430-8865394
FORWARD
Length = 369
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 170/369 (46%), Gaps = 37/369 (10%)
Query: 10 LLFIGAVFA---------DLLQNSDFETPPLNIPKNSSIPFQLLNQNTTIPGWSFEGTVL 60
LLFI A +L N DFE P K S + + IP W G V
Sbjct: 11 LLFIATAMAAKSTVSFRDGMLPNGDFELGP----KPSDMKGTEILNKLAIPNWEVTGFVE 66
Query: 61 YVTATDT-----IALPGNGHAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSN 115
Y+ + + +P A++LG + I Q ++Y LTFS A + C+ +
Sbjct: 67 YIKSGHKQGDMLLVVPAGKFAVRLGNEASIKQRLK-VVKGMYYSLTFSAART----CAQD 121
Query: 116 ASVGVSASDRPSVFFFKQNYGKEKWESYGVYLGSWELEEKINL---VIESEATESDGNET 172
+ +S + V + Y W+ Y +W + + ++ VI + E D
Sbjct: 122 ERLNISVAPDSGVIPIQTVYSSSGWDLY-----AWAFQAESDVAEVVIHNPGVEED--PA 174
Query: 173 CWPLIDKLLLKSIETLVPSNDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWS 232
C PLID + ++S+ P+N N+L NGGFE GP S+ G+L+ P SPL W
Sbjct: 175 CGPLIDGVAMRSLYPPRPTNKNILKNGGFEEGPLVLPGSTTGVLIPPFIEDDHSPLPGWM 234
Query: 233 ITG--TVKYIDSKNYFVPEGNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGDANDSCE 290
+ VKY+D +++ VP+G A+E+V+G + I G TY L F +GDAN++C+
Sbjct: 235 VESLKAVKYVDVEHFSVPQGRRAIELVAGKESAIAQVVRTVIGKTYVLSFAVGDANNACK 294
Query: 291 GNFVVGAQAGFAAQNFTLLSNGTGSATKKSLEFKADSSIALISF--TAYTTTQTKDGVFC 348
G+ VV A AG S GTG + S+ F A S+ + I F T Y C
Sbjct: 295 GSMVVEAFAGKDTLKVPYESKGTGGFKRASIRFVAVSTRSRIMFYSTFYAMRSDDFSSLC 354
Query: 349 GPVVDNIVL 357
GPV+D++ L
Sbjct: 355 GPVIDDVKL 363
>AT2G34510.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
anchored to membrane; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF642
(InterPro:IPR006946), Galactose-binding like
(InterPro:IPR008979); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G29980.1); Has 177
Blast hits to 163 proteins in 15 species: Archae - 0;
Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 167;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr2:14544114-14546732 REVERSE
Length = 401
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 183/377 (48%), Gaps = 33/377 (8%)
Query: 20 LLQNSDFETPPLN-IPKNSSIPFQLLNQNTTIPGWSFEGTVLYVTATDT-----IALPGN 73
L+ N DFETPP N P ++ ++ + IP W +GTV + + + +P
Sbjct: 40 LVVNGDFETPPSNGFPDDA-----IIEDTSEIPSWRSDGTVELIKSGQKQGGMILIVPEG 94
Query: 74 GHAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSNASVGVSASDRP---SVFF 130
HA++LG D +I+Q + I Y +TFS A + S N V V++SD P
Sbjct: 95 RHAVRLGNDAEISQELTVEKGSI-YSVTFSAARTCAQLESLN--VSVASSDEPIASQTID 151
Query: 131 FKQNYGKEKWESYGVYLGSWELE---EKINLVIESEATESDGNETCWPLIDKLLLKSIET 187
+ Y + W+ Y +W E +++ LV ++ E D TC P+ID + +K + T
Sbjct: 152 LQTVYSVQGWDPY-----AWAFEAVVDRVRLVFKNPGMEDD--PTCGPIIDDIAVKKLFT 204
Query: 188 LVPSNDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWSITG--TVKYIDSKNY 245
N ++NG FE GP N++ G+LL +S L W++ V++IDS ++
Sbjct: 205 PDKPKGNAVINGDFEEGPWMFRNTTLGVLLPTNLDEEISSLPGWTVESNRAVRFIDSDHF 264
Query: 246 FVPEGNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGDANDSCEGNFVVGAQAGFAAQN 305
VPEG A+E++SG I Y + F+LG A D C+ V A AG AQN
Sbjct: 265 SVPEGKRALELLSGKEGIISQMVETKANIPYKMSFSLGHAGDKCKEPLAVMAFAGDQAQN 324
Query: 306 FTLLSNGTGSATKKSLEFKADSSIALISF-TAYTTTQTKDGV-FCGPVVDNIVLRASNGM 363
F ++ S + L F A + I+F + Y T+T D CGPV+D++ + S
Sbjct: 325 FHYMAQANSSFERSELNFTAKAERTRIAFYSIYYNTRTDDMTSLCGPVIDDVKVWFSGSS 384
Query: 364 KSAMKWG--ILISLLFL 378
+ + IL+SL+F+
Sbjct: 385 RIGFSFPLFILLSLVFI 401
>AT1G80240.1 | Symbols: | unknown protein | chr1:30171520-30172799
REVERSE
Length = 370
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 165/357 (46%), Gaps = 28/357 (7%)
Query: 20 LLQNSDFETPPLNIPKNSSIPFQLLNQNTTIPGWSFEGTVLYVTATD-----TIALPGNG 74
LL N +FE P K S + ++ + T +P W+ G V ++ + + +P
Sbjct: 29 LLPNGNFELGP----KPSQMKGSVVKERTAVPNWNIIGFVEFIKSGQKQDDMVLVVPQGS 84
Query: 75 HAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSNASVGVSASDRPSVFFFKQN 134
A++LG + I+Q S + Y +TFS A + C+ + + +S + V +
Sbjct: 85 SAVRLGNEASISQKISVLPGRL-YSITFSAART----CAQDERLNISVTHESGVIPIQTM 139
Query: 135 YGKEKWESYGVYLGSWELEE---KINLVIESEATESDGNETCWPLIDKLLLKSIETLVPS 191
YG + W+SY SW + +I + + E + C PLID + +K++ S
Sbjct: 140 YGSDGWDSY-----SWAFKAGGPEIEIRFHNPGVEE--HPACGPLIDAVAIKALFPPRFS 192
Query: 192 NDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWSITG--TVKYIDSKNYFVPE 249
NL+ NG FE GP + G+L+ P SPL W I VKY+D ++ VPE
Sbjct: 193 GYNLIKNGNFEEGPYVFPTAKWGVLIPPFIEDDNSPLPGWMIESLKAVKYVDKAHFAVPE 252
Query: 250 GNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGDANDSCEGNFVVGAQAGFAAQNFTLL 309
G+ A+E+V G + I + Y L F +GDA D CEG +V A AG
Sbjct: 253 GHRAIELVGGKESAISQIVRTSLNKFYALTFNVGDARDGCEGPMIVEAFAGQGKVMVDYA 312
Query: 310 SNGTGSATKKSLEFKADSSIALISF--TAYTTTQTKDGVFCGPVVDNIVLRASNGMK 364
S G G + L FKA S+ ++F T Y G CGPV+D++ L A ++
Sbjct: 313 SKGKGGFRRGRLVFKAVSARTRVTFLSTFYHMKSDHSGSLCGPVIDDVRLVAVGKLR 369
>AT2G41800.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cell wall, plant-type cell wall; EXPRESSED IN: 7 plant
structures; EXPRESSED DURING: 4 anthesis, C globular
stage, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF642 (InterPro:IPR006946), Galactose-binding like
(InterPro:IPR008979); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41810.1); Has 156
Blast hits to 155 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 156;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr2:17436671-17438005 REVERSE
Length = 370
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 166/350 (47%), Gaps = 28/350 (8%)
Query: 20 LLQNSDFETPPLNIPKNSSIPFQLLNQNTTIPGWSFEGTVLYVTATDT-----IALPGNG 74
+L N +FE PL K++ Q++ N+ +P W G V V+ +P
Sbjct: 33 ILPNGNFEITPL---KSNMKGRQIIGANS-LPHWEIAGHVELVSGGPQPGGFYFPVPRGV 88
Query: 75 HAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSNASVGVSASDRPSVFFFKQN 134
HA++LG G I+Q + L +SL C+ + ++ VS + + +
Sbjct: 89 HAVRLGNLGTISQNVRVKSG-----LVYSLTFGATRTCAQDENIKVSVPGQANELPLQTV 143
Query: 135 YGKEKWESYGVYLGSWELE---EKINLVIESEATESDGNETCWPLIDKLLLKSIETLVPS 191
+ + ++Y +W + + + + + + D TC PL+D + +K I L +
Sbjct: 144 FSSDGGDTY-----AWAFKATSDVVKVTFHNPGVQED--RTCGPLLDVVAIKEILPLRYT 196
Query: 192 NDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWSITG--TVKYIDSKNYFVPE 249
NL+ NGGFE GP +N S GIL+ +SPL W + VKYID +++ VP
Sbjct: 197 RGNLVKNGGFEIGPHVFANFSTGILIPARIQDFISPLPGWIVESLKPVKYIDRRHFKVPY 256
Query: 250 GNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGDANDSCEGNFVVGAQAGFAAQNFTLL 309
G AVE+V+G + I G Y L F +GDA + C G+ +V A AG + +
Sbjct: 257 GQGAVELVAGRESAIAQIIRTIAGKAYMLSFAVGDAQNGCHGSMMVEAFAGREPFKLSFM 316
Query: 310 SNGTGSATKKSLEFKADSSIALISF-TAYTTTQTKD-GVFCGPVVDNIVL 357
S G G+ F ADS ++F +A+ T+ D G CGPV+D++V+
Sbjct: 317 SEGKGAFKTGHFRFVADSDRTRLTFYSAFYHTKLHDFGHLCGPVLDSVVV 366
>AT2G41810.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF642
(InterPro:IPR006946), Galactose-binding like
(InterPro:IPR008979); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41800.1); Has 161
Blast hits to 157 proteins in 12 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 159;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr2:17439414-17441296 REVERSE
Length = 370
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 166/348 (47%), Gaps = 28/348 (8%)
Query: 20 LLQNSDFETPPLNIPKNSSIPFQLLNQNTTIPGWSFEGTVLYVTATDT-----IALPGNG 74
LL N +FE IP S++ + + ++P W G V V+ A+P
Sbjct: 33 LLPNGNFE----QIPNKSNMRKRQIIGKYSLPHWEISGHVELVSGGPQPGGFYFAVPRGV 88
Query: 75 HAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSNASVGVSASDRPSVFFFKQN 134
HA +LG I+Q + + Y LTF + + + + SV ++ P F N
Sbjct: 89 HAARLGNLASISQYVKVKSGLV-YSLTFGVTRTCAQDENIRISVPGQTNELPIQTLFSTN 147
Query: 135 YGKEKWESYGVYLGSWELEEKINLV---IESEATESDGNETCWPLIDKLLLKSIETLVPS 191
G ++Y +W + +LV + + D TC P++D + +K I L +
Sbjct: 148 GG----DTY-----AWAFKATSDLVKVTFYNPGVQED--PTCGPIVDAVAIKEILPLRYT 196
Query: 192 NDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWSITG--TVKYIDSKNYFVPE 249
NL+ NGGFE GP SN S GIL+ ++SPL W + VKYID++++ VP
Sbjct: 197 KGNLVKNGGFETGPHVFSNFSTGILIPAKIQDLISPLPGWIVESLKPVKYIDNRHFKVPS 256
Query: 250 GNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGDANDSCEGNFVVGAQAGFAAQNFTLL 309
G AA+E+V+G + I G Y L F +GDA++ C G+ +V A AG +A T
Sbjct: 257 GLAAIELVAGRESAIAQIIRTVSGKNYILSFVVGDAHNGCHGSMMVEAFAGISAFKVTFE 316
Query: 310 SNGTGSATKKSLEFKADSSIALISFTA--YTTTQTKDGVFCGPVVDNI 355
SN G+ F+ADS+ I+F + Y T G CGPV+DN+
Sbjct: 317 SNDKGAFKVGRFAFRADSNRTRITFYSGFYHTKLHDFGHLCGPVLDNV 364
>AT1G29980.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane, anchored to membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF642 (InterPro:IPR006946),
Galactose-binding like (InterPro:IPR008979); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G34510.1); Has 180 Blast hits to 163 proteins
in 15 species: Archae - 0; Bacteria - 10; Metazoa - 0;
Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr1:10503411-10505994 REVERSE
Length = 407
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 169/359 (47%), Gaps = 31/359 (8%)
Query: 15 AVFADLLQNSDFETPPLNIPKNSSIPFQ-LLNQNTTIPGWSFEGTVLYVTATDT-----I 68
AV L+ N DFET P +S P + + + IP W GTV + + +
Sbjct: 35 AVEDGLVINGDFETSP-----SSGFPDDGVTDGPSDIPSWKSNGTVELINSGQKQGGMIL 89
Query: 69 ALPGNGHAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSNASVGVSASDRPSV 128
+P HA++LG D +I+Q + ++ Y +TFS A + S N SV +D +
Sbjct: 90 IVPQGRHAVRLGNDAEISQDLTVEKGFV-YSVTFSAARTCAQLESINVSVASVNADADDM 148
Query: 129 FFFKQN-----YGKEKWESYGVYLGSWELE---EKINLVIESEATESDGNETCWPLIDKL 180
+ Y + W+ Y +W E + + LV ++ E D TC P+ID +
Sbjct: 149 LASRNVDLQTLYSVQGWDPY-----AWAFEAEDDHVRLVFKNPGMEDD--PTCGPIIDDI 201
Query: 181 LLKSIETLVPSNDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWSITG--TVK 238
+K + T DN ++NG FE GP N+S G+LL +S L W++ V+
Sbjct: 202 AIKKLFTPDKPKDNAVINGDFEDGPWMFRNTSLGVLLPTNLDEEISSLPGWTVESNRAVR 261
Query: 239 YIDSKNYFVPEGNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGDANDSCEGNFVVGAQ 298
++DS ++ VP+G AVE++SG I Y L F+LG A D C+ + A
Sbjct: 262 FVDSDHFSVPKGKRAVELLSGKEGIISQMVETKADKPYILSFSLGHAGDKCKEPLAIMAF 321
Query: 299 AGFAAQNFTLLSNGTGSATKKSLEFKADSSIALISF-TAYTTTQTKD-GVFCGPVVDNI 355
AG AQNF ++ S K L F A + ++F + Y T+T D CGPV+D++
Sbjct: 322 AGDQAQNFHYMAQANSSFEKAGLNFTAKADRTRVAFYSVYYNTRTDDMSSLCGPVIDDV 380
>AT1G29980.2 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane, anchored to membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF642 (InterPro:IPR006946),
Galactose-binding like (InterPro:IPR008979); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G34510.1); Has 174 Blast hits to 163 proteins
in 15 species: Archae - 0; Bacteria - 10; Metazoa - 0;
Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr1:10503411-10504617 REVERSE
Length = 371
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 167/354 (47%), Gaps = 31/354 (8%)
Query: 20 LLQNSDFETPPLNIPKNSSIPFQ-LLNQNTTIPGWSFEGTVLYVTATDT-----IALPGN 73
L+ N DFET P +S P + + + IP W GTV + + + +P
Sbjct: 4 LVINGDFETSP-----SSGFPDDGVTDGPSDIPSWKSNGTVELINSGQKQGGMILIVPQG 58
Query: 74 GHAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSNASVGVSASDRPSVFFFKQ 133
HA++LG D +I+Q + ++ Y +TFS A + S N SV +D + +
Sbjct: 59 RHAVRLGNDAEISQDLTVEKGFV-YSVTFSAARTCAQLESINVSVASVNADADDMLASRN 117
Query: 134 N-----YGKEKWESYGVYLGSWELE---EKINLVIESEATESDGNETCWPLIDKLLLKSI 185
Y + W+ Y +W E + + LV ++ E D TC P+ID + +K +
Sbjct: 118 VDLQTLYSVQGWDPY-----AWAFEAEDDHVRLVFKNPGMEDD--PTCGPIIDDIAIKKL 170
Query: 186 ETLVPSNDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWSITG--TVKYIDSK 243
T DN ++NG FE GP N+S G+LL +S L W++ V+++DS
Sbjct: 171 FTPDKPKDNAVINGDFEDGPWMFRNTSLGVLLPTNLDEEISSLPGWTVESNRAVRFVDSD 230
Query: 244 NYFVPEGNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGDANDSCEGNFVVGAQAGFAA 303
++ VP+G AVE++SG I Y L F+LG A D C+ + A AG A
Sbjct: 231 HFSVPKGKRAVELLSGKEGIISQMVETKADKPYILSFSLGHAGDKCKEPLAIMAFAGDQA 290
Query: 304 QNFTLLSNGTGSATKKSLEFKADSSIALISF-TAYTTTQTKD-GVFCGPVVDNI 355
QNF ++ S K L F A + ++F + Y T+T D CGPV+D++
Sbjct: 291 QNFHYMAQANSSFEKAGLNFTAKADRTRVAFYSVYYNTRTDDMSSLCGPVIDDV 344
>AT3G08030.1 | Symbols: | unknown protein | chr3:2564191-2565819
FORWARD
Length = 365
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 161/352 (45%), Gaps = 34/352 (9%)
Query: 21 LQNSDFETPPLNIPKNSSIPFQLLNQNTTIPGWSFEGTVLYVTATDTIALPGNG------ 74
L+N +FE P ++ LL +N +P W G V Y+ PG
Sbjct: 29 LRNGNFEESPKKTDMKKTV---LLGKNA-LPEWETTGFVEYIAGGPQ---PGGMYFPVAH 81
Query: 75 --HAIQLGQDGKINQTFSPSADYIHYLLTFSLATSGGSNCSSNASVGVSASDRPSVFFFK 132
HA++LG + I+Q + Y LTF + + + SV + D P
Sbjct: 82 GVHAVRLGNEATISQKLEVKPGSL-YALTFGASRTCAQDEVLRVSVPSQSGDLPL----- 135
Query: 133 QNYGKEKWESYGVYLGSWELEEK---INLVIESEATESDGNETCWPLIDKLLLKSIETLV 189
+ + S+G + +W K + + + + D C PL+D + +K + +
Sbjct: 136 ----QTLYNSFGGDVYAWAFVAKTSQVTVTFHNPGVQED--PACGPLLDAVAIKELVHPI 189
Query: 190 PSNDNLLLNGGFEFGPEFQSNSSEGILLDPVPTPVLSPLRHWSITG--TVKYIDSKNYFV 247
+ NL+ NGGFE GP NS++G+LL P + SPL W I VK+IDSK + V
Sbjct: 190 YTRGNLVKNGGFEEGPHRLVNSTQGVLLPPKQEDLTSPLPGWIIESLKAVKFIDSKYFNV 249
Query: 248 PEGNAAVEIVSGVSAGIQAATTLTEGSTYNLEFTLGDANDSCEGNFVVGAQAGFAAQNFT 307
P G+AA+E+V+G + I + G TY L F +GDA + C G+ +V A A
Sbjct: 250 PFGHAAIELVAGKESAIAQVIRTSPGQTYTLSFVVGDAKNDCHGSMMVEAFAARDTLKVP 309
Query: 308 LLSNGTGSATKKSLEFKADSSIALISFTA--YTTTQTKDGVFCGPVVDNIVL 357
S G G S +FKA + I+F + Y T +T CGPV+D IV+
Sbjct: 310 HTSVGGGHVKTASFKFKAVEARTRITFFSGFYHTKKTDTVSLCGPVIDEIVV 361
>AT3G08030.2 | Symbols: | unknown protein | chr3:2564517-2565819
FORWARD
Length = 323
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 151/327 (46%), Gaps = 25/327 (7%)
Query: 43 LLNQNTTIPGWSFEGTVLYVTATDT-----IALPGNGHAIQLGQDGKINQTFSPSADYIH 97
LL +N +P W G V Y+ + HA++LG + I+Q +
Sbjct: 6 LLGKNA-LPEWETTGFVEYIAGGPQPGGMYFPVAHGVHAVRLGNEATISQKLEVKPGSL- 63
Query: 98 YLLTFSLATSGGSNCSSNASVGVSASDRPSVFFFKQNYGKEKWESYGVYLGSWELEEK-- 155
Y LTF + + + SV + D P + + S+G + +W K
Sbjct: 64 YALTFGASRTCAQDEVLRVSVPSQSGDLPL---------QTLYNSFGGDVYAWAFVAKTS 114
Query: 156 -INLVIESEATESDGNETCWPLIDKLLLKSIETLVPSNDNLLLNGGFEFGPEFQSNSSEG 214
+ + + + D C PL+D + +K + + + NL+ NGGFE GP NS++G
Sbjct: 115 QVTVTFHNPGVQED--PACGPLLDAVAIKELVHPIYTRGNLVKNGGFEEGPHRLVNSTQG 172
Query: 215 ILLDPVPTPVLSPLRHWSITG--TVKYIDSKNYFVPEGNAAVEIVSGVSAGIQAATTLTE 272
+LL P + SPL W I VK+IDSK + VP G+AA+E+V+G + I +
Sbjct: 173 VLLPPKQEDLTSPLPGWIIESLKAVKFIDSKYFNVPFGHAAIELVAGKESAIAQVIRTSP 232
Query: 273 GSTYNLEFTLGDANDSCEGNFVVGAQAGFAAQNFTLLSNGTGSATKKSLEFKADSSIALI 332
G TY L F +GDA + C G+ +V A A S G G S +FKA + I
Sbjct: 233 GQTYTLSFVVGDAKNDCHGSMMVEAFAARDTLKVPHTSVGGGHVKTASFKFKAVEARTRI 292
Query: 333 SFTA--YTTTQTKDGVFCGPVVDNIVL 357
+F + Y T +T CGPV+D IV+
Sbjct: 293 TFFSGFYHTKKTDTVSLCGPVIDEIVV 319