Jatropha Genome Database

JcCA0155011.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155011.20 + phase: 0 
         (334 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27110.2 | Symbols:  | peptidase M48 family protein | chr3:99...   520   e-148
AT3G27110.1 | Symbols:  | peptidase M48 family protein | chr3:99...   520   e-148

>AT3G27110.2 | Symbols:  | peptidase M48 family protein |
           chr3:9998006-9999892 FORWARD
          Length = 344

 Score =  520 bits (1338), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/340 (76%), Positives = 287/340 (84%), Gaps = 9/340 (2%)

Query: 3   SVPLSSLCLPQRKLSSLSFSF------GISDNLRSGLASVGFNSGKKNS-GVRFSICRAA 55
           S P+ SLC  Q    S S  +      G S   RS ++ +GF + K     VR  ICRA 
Sbjct: 6   SAPVLSLCYNQSGELSRSLGYRLPKKVGFSSGRRS-VSYIGFGAEKVGRFRVRVPICRAV 64

Query: 56  A-VVFRDLDADDFRHPLDKQNTLLLRAIPGLNELGKALLGSMTEQIMLLENIGTSVLVSK 114
             ++F+DLDADDFRHP DKQNTLLLRAIPGLNE GKALLGSMTEQIMLLENIGTSVLVSK
Sbjct: 65  PPLLFKDLDADDFRHPFDKQNTLLLRAIPGLNEFGKALLGSMTEQIMLLENIGTSVLVSK 124

Query: 115 NQLYELHQLMTEAAEILNLEPPDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELLTRKE 174
           NQL +LH L+ EAAEILN+E PDLYVRQSPVPNAYTLAISGKKPF+VVHTSL+ELLT  E
Sbjct: 125 NQLSDLHGLLVEAAEILNIEAPDLYVRQSPVPNAYTLAISGKKPFIVVHTSLIELLTSAE 184

Query: 175 LQAVLAHELGHLKCDHGVWLTFANILTLGAYTLPGLGQLIAQSLEEQLFRWLRAAELTCD 234
           LQAVLAHELGHLKCDHGVWLTFANILTLGAYT+P  GQ+IA++LEEQL RWLR+AELTCD
Sbjct: 185 LQAVLAHELGHLKCDHGVWLTFANILTLGAYTVPAFGQMIARTLEEQLLRWLRSAELTCD 244

Query: 235 RAALLVAQDPKVVISVLMKLAGGSPSVADQLNVDAFLEQARSYDKASSSPMGWYIRNAQT 294
           RAALLVAQDPKVV+SVLMKLAGG PS+ADQLNVDAFLEQARSYDKASSSP+GWYIRNAQT
Sbjct: 245 RAALLVAQDPKVVVSVLMKLAGGCPSIADQLNVDAFLEQARSYDKASSSPLGWYIRNAQT 304

Query: 295 RQLSHPLPVLRAREIDEWSRSREYRTLLKRALERNAVQNV 334
            QLSHPLPVLRAREIDEWSRS EY++LLKRA  ++ VQ V
Sbjct: 305 SQLSHPLPVLRAREIDEWSRSLEYKSLLKRANRKSTVQKV 344


>AT3G27110.1 | Symbols:  | peptidase M48 family protein |
           chr3:9998006-9999892 FORWARD
          Length = 344

 Score =  520 bits (1338), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/340 (76%), Positives = 287/340 (84%), Gaps = 9/340 (2%)

Query: 3   SVPLSSLCLPQRKLSSLSFSF------GISDNLRSGLASVGFNSGKKNS-GVRFSICRAA 55
           S P+ SLC  Q    S S  +      G S   RS ++ +GF + K     VR  ICRA 
Sbjct: 6   SAPVLSLCYNQSGELSRSLGYRLPKKVGFSSGRRS-VSYIGFGAEKVGRFRVRVPICRAV 64

Query: 56  A-VVFRDLDADDFRHPLDKQNTLLLRAIPGLNELGKALLGSMTEQIMLLENIGTSVLVSK 114
             ++F+DLDADDFRHP DKQNTLLLRAIPGLNE GKALLGSMTEQIMLLENIGTSVLVSK
Sbjct: 65  PPLLFKDLDADDFRHPFDKQNTLLLRAIPGLNEFGKALLGSMTEQIMLLENIGTSVLVSK 124

Query: 115 NQLYELHQLMTEAAEILNLEPPDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELLTRKE 174
           NQL +LH L+ EAAEILN+E PDLYVRQSPVPNAYTLAISGKKPF+VVHTSL+ELLT  E
Sbjct: 125 NQLSDLHGLLVEAAEILNIEAPDLYVRQSPVPNAYTLAISGKKPFIVVHTSLIELLTSAE 184

Query: 175 LQAVLAHELGHLKCDHGVWLTFANILTLGAYTLPGLGQLIAQSLEEQLFRWLRAAELTCD 234
           LQAVLAHELGHLKCDHGVWLTFANILTLGAYT+P  GQ+IA++LEEQL RWLR+AELTCD
Sbjct: 185 LQAVLAHELGHLKCDHGVWLTFANILTLGAYTVPAFGQMIARTLEEQLLRWLRSAELTCD 244

Query: 235 RAALLVAQDPKVVISVLMKLAGGSPSVADQLNVDAFLEQARSYDKASSSPMGWYIRNAQT 294
           RAALLVAQDPKVV+SVLMKLAGG PS+ADQLNVDAFLEQARSYDKASSSP+GWYIRNAQT
Sbjct: 245 RAALLVAQDPKVVVSVLMKLAGGCPSIADQLNVDAFLEQARSYDKASSSPLGWYIRNAQT 304

Query: 295 RQLSHPLPVLRAREIDEWSRSREYRTLLKRALERNAVQNV 334
            QLSHPLPVLRAREIDEWSRS EY++LLKRA  ++ VQ V
Sbjct: 305 SQLSHPLPVLRAREIDEWSRSLEYKSLLKRANRKSTVQKV 344