Jatropha Genome Database

JcCA0154801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154801.10 + phase: 0 
         (198 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08520.1 | Symbols:  | myb family transcription factor | chr5...   159   7e-40
AT1G49010.1 | Symbols:  | myb family transcription factor | chr1...   122   1e-28
AT5G04760.1 | Symbols:  | myb family transcription factor | chr5...   105   2e-23
AT5G58900.1 | Symbols:  | myb family transcription factor | chr5...   105   3e-23
AT2G38090.1 | Symbols:  | myb family transcription factor | chr2...   101   4e-22
AT5G23650.1 | Symbols:  | myb family transcription factor | chr5...   100   6e-22
AT5G01200.1 | Symbols:  | myb family transcription factor | chr5...    96   2e-20
AT5G05790.1 | Symbols:  | myb family transcription factor | chr5...    93   9e-20
AT3G11280.2 | Symbols:  | myb family transcription factor | chr3...    92   2e-19
AT3G11280.1 | Symbols:  | myb family transcription factor | chr3...    92   2e-19
AT5G47390.1 | Symbols:  | myb family transcription factor | chr5...    91   3e-19
AT5G61620.1 | Symbols:  | myb family transcription factor | chr5...    88   4e-18
AT5G56840.1 | Symbols:  | DNA-binding family protein | chr5:2298...    87   5e-18
AT3G10580.2 | Symbols:  | myb family transcription factor | chr3...    79   1e-15
AT3G10580.1 | Symbols:  | myb family transcription factor | chr3...    79   1e-15
AT1G70000.1 | Symbols:  | DNA-binding family protein | chr1:2636...    77   5e-15
AT4G09450.1 | Symbols:  | myb family transcription factor | chr4...    75   3e-14
AT3G16350.1 | Symbols:  | myb family transcription factor | chr3...    74   4e-14
AT1G19000.2 | Symbols:  | myb family transcription factor | chr1...    72   3e-13
AT1G19000.1 | Symbols:  | myb family transcription factor | chr1...    72   3e-13
AT1G74840.1 | Symbols:  | myb family transcription factor | chr1...    69   1e-12
AT3G10590.1 | Symbols:  | myb family transcription factor | chr3...    62   2e-10
AT3G10585.1 | Symbols:  | myb family transcription factor / I-bo...    54   5e-08

>AT5G08520.1 | Symbols:  | myb family transcription factor |
           chr5:2755470-2757741 REVERSE
          Length = 298

 Score =  159 bits (403), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 87/138 (63%), Positives = 88/138 (63%), Gaps = 3/138 (2%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
           LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG
Sbjct: 127 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 186

Query: 87  NGDISAPQGPITGQTNXXXXXXXXXXXXXQPPQHXXXXXXXXXXXXXXXXXXXXXXLV-- 144
           N D+S PQGPITGQ N                                            
Sbjct: 187 NADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPGPPMYGTPAIG 246

Query: 145 -SAVGTPVNLPAPAHMAY 161
             AVGTPVNLPAP HMAY
Sbjct: 247 QPAVGTPVNLPAPPHMAY 264


>AT1G49010.1 | Symbols:  | myb family transcription factor |
           chr1:18132714-18133778 FORWARD
          Length = 314

 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 55/70 (78%), Positives = 64/70 (91%)

Query: 18  LKFDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 77
           + + + +  LFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNSMN+DRRRS
Sbjct: 134 IPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRS 193

Query: 78  SIHDITSVGN 87
           SIHDIT+V N
Sbjct: 194 SIHDITTVNN 203


>AT5G04760.1 | Symbols:  | myb family transcription factor |
           chr5:1373752-1374529 REVERSE
          Length = 215

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 55/59 (93%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 85
           LFL+GL +YGKGDWRSISRN VVTRTPTQVASHAQKYF+R NS+ K+R+RSSIHDIT+V
Sbjct: 108 LFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTV 166


>AT5G58900.1 | Symbols:  | myb family transcription factor |
           chr5:23783275-23784667 REVERSE
          Length = 288

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 54/59 (91%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 85
           LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  KD+RR+SIHDIT+V
Sbjct: 150 LFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTV 208


>AT2G38090.1 | Symbols:  | myb family transcription factor |
           chr2:15945278-15946775 FORWARD
          Length = 298

 Score =  101 bits (251), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/58 (79%), Positives = 52/58 (89%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 85
           FL+GL KYGKGDWR+I+RNFV TRTPTQVASHAQKYFIR  +  KD+RRSSIHDIT+V
Sbjct: 151 FLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRSSIHDITTV 208


>AT5G23650.1 | Symbols:  | myb family transcription factor |
           chr5:7969812-7971019 FORWARD
          Length = 337

 Score =  100 bits (249), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 51/73 (69%), Positives = 55/73 (75%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGN 87
           FL GL KYGKGDWRSISR+ VVTRT TQVASHAQKYF  +NS +K R+R SIHDIT   N
Sbjct: 130 FLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPSIHDITIAEN 189

Query: 88  GDISAPQGPITGQ 100
             IS  Q PIT Q
Sbjct: 190 KSISTKQRPITWQ 202


>AT5G01200.1 | Symbols:  | myb family transcription factor |
           chr5:77116-78294 FORWARD
          Length = 267

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 43/58 (74%), Positives = 52/58 (89%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 85
           FL+GL KYGKGDWR+I+++FV TRTPTQVASHAQKYF+R  +  KD+RRSSIHDIT+V
Sbjct: 156 FLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGKDKRRSSIHDITTV 213


>AT5G05790.1 | Symbols:  | myb family transcription factor |
           chr5:1740724-1741671 REVERSE
          Length = 277

 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 55/68 (80%), Gaps = 2/68 (2%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG- 86
           FLLGL KYGKGDWR+ISRNFV ++TPTQVASHAQKY+ R  S  KD+RR SIHDIT+V  
Sbjct: 141 FLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNL 200

Query: 87  -NGDISAP 93
            N ++S P
Sbjct: 201 LNANLSRP 208


>AT3G11280.2 | Symbols:  | myb family transcription factor |
           chr3:3533477-3534393 REVERSE
          Length = 263

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 84
           FLLGL KYGKGDWR+ISRNFVV++TPTQVASHAQKY+ R  S  KD+RR SIHDIT+
Sbjct: 137 FLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT 193


>AT3G11280.1 | Symbols:  | myb family transcription factor |
           chr3:3533477-3534393 REVERSE
          Length = 263

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 84
           FLLGL KYGKGDWR+ISRNFVV++TPTQVASHAQKY+ R  S  KD+RR SIHDIT+
Sbjct: 137 FLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT 193


>AT5G47390.1 | Symbols:  | myb family transcription factor |
           chr5:19227001-19228546 FORWARD
          Length = 365

 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
           +FLLGL K GKGDWR ISRN+V TRTPTQVASHAQKYFIR +++++ +RRSS+ D+    
Sbjct: 105 MFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPDE 164

Query: 87  NGDI 90
            GDI
Sbjct: 165 VGDI 168


>AT5G61620.1 | Symbols:  | myb family transcription factor |
           chr5:24772383-24773507 FORWARD
          Length = 317

 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 10/82 (12%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDIT---- 83
           FL+GL+K GKGDWR I+++FV TRTPTQVASHAQKYFIRLN  +K +RR+S+ DI+    
Sbjct: 118 FLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVNDKRKRRASLFDISLEDQ 177

Query: 84  ------SVGNGDISAPQGPITG 99
                 S      + P+ PITG
Sbjct: 178 KEKERNSQDASTKTPPKQPITG 199


>AT5G56840.1 | Symbols:  | DNA-binding family protein |
           chr5:22980789-22982152 FORWARD
          Length = 233

 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 51/61 (83%), Gaps = 1/61 (1%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIR-LNSMNKDRRRSSIHDITSVG 86
           FL+GL+K GKGDWR ISRNFVVT++PTQVASHAQKYF+R   +++  RRR+S+ D+ S G
Sbjct: 101 FLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHHKRRRTSLFDMVSAG 160

Query: 87  N 87
           N
Sbjct: 161 N 161


>AT3G10580.2 | Symbols:  | myb family transcription factor |
           chr3:3307083-3308230 REVERSE
          Length = 256

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 2/67 (2%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
           LFL GL+KYGKGDW+SISR  V +R+P QVASHAQKYF+R    NK  +R SIHD+T   
Sbjct: 104 LFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLR--QKNKKGKRFSIHDMTLGD 161

Query: 87  NGDISAP 93
             +++ P
Sbjct: 162 AENVTVP 168


>AT3G10580.1 | Symbols:  | myb family transcription factor |
           chr3:3307083-3308230 REVERSE
          Length = 287

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 2/67 (2%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
           LFL GL+KYGKGDW+SISR  V +R+P QVASHAQKYF+R    NK  +R SIHD+T   
Sbjct: 104 LFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLR--QKNKKGKRFSIHDMTLGD 161

Query: 87  NGDISAP 93
             +++ P
Sbjct: 162 AENVTVP 168


>AT1G70000.1 | Symbols:  | DNA-binding family protein |
           chr1:26363674-26364635 REVERSE
          Length = 261

 Score = 77.4 bits (189), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 47/57 (82%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDIT 83
           LFL GL K GKGDWR ISRNFV TRTPTQVASHAQKYF+R  + N+ RRRSS+ DIT
Sbjct: 107 LFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDIT 163


>AT4G09450.1 | Symbols:  | myb family transcription factor |
           chr4:5983277-5984500 FORWARD
          Length = 200

 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 44/57 (77%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDIT 83
           LFL GL+K+GKGDW++ISR  V +RT TQVASHAQKYF R    + + +R SIHD+T
Sbjct: 100 LFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQESTNTKRPSIHDMT 156


>AT3G16350.1 | Symbols:  | myb family transcription factor |
           chr3:5547828-5549397 FORWARD
          Length = 387

 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 35/39 (89%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 65
           LFL+GL K GKGDWR ISRN+V +RTPTQVASHAQKYFI
Sbjct: 146 LFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFI 184


>AT1G19000.2 | Symbols:  | myb family transcription factor |
           chr1:6561335-6562684 REVERSE
          Length = 285

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 54/69 (78%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGN 87
           FL+GL K GKGDW+ ISRNFV +RTPTQVASHAQKYF+R  ++N+ RRRSS+ DIT+   
Sbjct: 112 FLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTETV 171

Query: 88  GDISAPQGP 96
            +++  Q P
Sbjct: 172 TEMAMEQDP 180


>AT1G19000.1 | Symbols:  | myb family transcription factor |
           chr1:6561335-6562684 REVERSE
          Length = 285

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 54/69 (78%)

Query: 28  FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGN 87
           FL+GL K GKGDW+ ISRNFV +RTPTQVASHAQKYF+R  ++N+ RRRSS+ DIT+   
Sbjct: 112 FLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTETV 171

Query: 88  GDISAPQGP 96
            +++  Q P
Sbjct: 172 TEMAMEQDP 180


>AT1G74840.1 | Symbols:  | myb family transcription factor |
           chr1:28116201-28117317 REVERSE
          Length = 265

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/38 (81%), Positives = 33/38 (86%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF 64
           LFLLGL + GKGDW+ ISRNFV TRT TQVASHAQKYF
Sbjct: 105 LFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYF 142


>AT3G10590.1 | Symbols:  | myb family transcription factor |
           chr3:3310424-3311311 REVERSE
          Length = 206

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 27  LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDIT--- 83
           LFL GL KYG+G     S NFV T+TP QV+SHAQ Y+ R  S NK  +R SI DIT   
Sbjct: 120 LFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQ-YYKRQKSDNKKEKRRSIFDITLES 178

Query: 84  SVGNGDISAPQGP 96
           + GN D S  Q P
Sbjct: 179 TEGNPD-SGNQNP 190


>AT3G10585.1 | Symbols:  | myb family transcription factor / I-box
           binding factor-related protein | chr3:3308697-3309429
           REVERSE
          Length = 172

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 5/60 (8%)

Query: 26  TLFLLGLD--KYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDIT 83
            L L G+D  +YGKG W  ISR FV   T TQVASHAQKY  R    +K R+R S+ DIT
Sbjct: 104 VLNLAGVDALRYGKGAWSMISREFV---TSTQVASHAQKYDKRQKLDSKKRKRWSVLDIT 160