Jatropha Genome Database
- JcCA0154651.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0154651.10 + phase: 1 /partial
(181 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G58350.2 | Symbols: ZW18 | ZW18 | chr1:21663131-21666827 REVERSE 302 6e-83
AT1G58350.1 | Symbols: ZW18 | ZW18 | chr1:21663131-21666827 REVERSE 302 6e-83
AT1G09980.2 | Symbols: | INVOLVED IN: biological_process unknow... 295 9e-81
AT1G09980.1 | Symbols: | INVOLVED IN: biological_process unknow... 295 9e-81
>AT1G58350.2 | Symbols: ZW18 | ZW18 | chr1:21663131-21666827 REVERSE
Length = 794
Score = 302 bits (774), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 137/185 (74%), Positives = 161/185 (87%), Gaps = 4/185 (2%)
Query: 1 SIMEPFRRHLYTYISLSGPQLGYLYSSNSLFNSGMWFMKKFRGTQCIHQLTFTDDPNLKN 60
S+MEP+R++L+TY+SLSGP LGYLYS+NSLFNSG+W +KK + TQ IHQLT TDDP+L++
Sbjct: 610 SLMEPYRKYLHTYLSLSGPHLGYLYSTNSLFNSGLWLLKKLKSTQVIHQLTLTDDPDLRH 669
Query: 61 TFFYRLCEQKTLENFRHIILISSPQDGYVPYHSARIELCRAASLDYSRKGRIFLEMLNNC 120
TFFY+LC+QKTLENF++IIL+SSPQDGYVPYHSARIE C+ AS D S++G FLEMLNNC
Sbjct: 670 TFFYKLCKQKTLENFKNIILLSSPQDGYVPYHSARIESCQPASFDSSKRGVAFLEMLNNC 729
Query: 121 LDQIRAPTS----QPRVFMRCDVNFDTSNHGRNFNSFIGRTAHIEFLESDIFARFIMWSF 176
LDQIR P Q RVFMRCDVNFD + +GRN NSFIGR AHIEFLESDIFARFIMWSF
Sbjct: 730 LDQIRGPVPEAPHQQRVFMRCDVNFDMTVYGRNLNSFIGRAAHIEFLESDIFARFIMWSF 789
Query: 177 QELFR 181
Q+LFR
Sbjct: 790 QDLFR 794
>AT1G58350.1 | Symbols: ZW18 | ZW18 | chr1:21663131-21666827 REVERSE
Length = 794
Score = 302 bits (774), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 137/185 (74%), Positives = 161/185 (87%), Gaps = 4/185 (2%)
Query: 1 SIMEPFRRHLYTYISLSGPQLGYLYSSNSLFNSGMWFMKKFRGTQCIHQLTFTDDPNLKN 60
S+MEP+R++L+TY+SLSGP LGYLYS+NSLFNSG+W +KK + TQ IHQLT TDDP+L++
Sbjct: 610 SLMEPYRKYLHTYLSLSGPHLGYLYSTNSLFNSGLWLLKKLKSTQVIHQLTLTDDPDLRH 669
Query: 61 TFFYRLCEQKTLENFRHIILISSPQDGYVPYHSARIELCRAASLDYSRKGRIFLEMLNNC 120
TFFY+LC+QKTLENF++IIL+SSPQDGYVPYHSARIE C+ AS D S++G FLEMLNNC
Sbjct: 670 TFFYKLCKQKTLENFKNIILLSSPQDGYVPYHSARIESCQPASFDSSKRGVAFLEMLNNC 729
Query: 121 LDQIRAPTS----QPRVFMRCDVNFDTSNHGRNFNSFIGRTAHIEFLESDIFARFIMWSF 176
LDQIR P Q RVFMRCDVNFD + +GRN NSFIGR AHIEFLESDIFARFIMWSF
Sbjct: 730 LDQIRGPVPEAPHQQRVFMRCDVNFDMTVYGRNLNSFIGRAAHIEFLESDIFARFIMWSF 789
Query: 177 QELFR 181
Q+LFR
Sbjct: 790 QDLFR 794
>AT1G09980.2 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF676,
hydrolase-like (InterPro:IPR007751); BEST Arabidopsis
thaliana protein match is: ZW18 (TAIR:AT1G58350.2); Has
342 Blast hits to 275 proteins in 70 species: Archae -
0; Bacteria - 0; Metazoa - 214; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
| chr1:3256541-3260866 REVERSE
Length = 801
Score = 295 bits (756), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 134/185 (72%), Positives = 161/185 (87%), Gaps = 4/185 (2%)
Query: 1 SIMEPFRRHLYTYISLSGPQLGYLYSSNSLFNSGMWFMKKFRGTQCIHQLTFTDDPNLKN 60
S+M+P+R++ +TYISLSGP LGYLYSSNSLFNSG+W +KK + TQ IHQLT TDDP+L+N
Sbjct: 617 SLMDPYRKYFHTYISLSGPHLGYLYSSNSLFNSGLWLLKKLKSTQVIHQLTLTDDPDLQN 676
Query: 61 TFFYRLCEQKTLENFRHIILISSPQDGYVPYHSARIELCRAASLDYSRKGRIFLEMLNNC 120
TFFY+LC+QKTL +F++IIL+SSPQDGYVPYHSARIE C+ AS D S++G FLEMLNNC
Sbjct: 677 TFFYKLCKQKTLCSFKNIILLSSPQDGYVPYHSARIESCQPASFDNSKRGVAFLEMLNNC 736
Query: 121 LDQIRAPTSQP----RVFMRCDVNFDTSNHGRNFNSFIGRTAHIEFLESDIFARFIMWSF 176
+DQIR P+ + RVFMRCDVNFDT+ +GRN NSFIGR AHIEFLESD+FARFIMWSF
Sbjct: 737 MDQIRGPSPETPHHQRVFMRCDVNFDTTLYGRNLNSFIGRAAHIEFLESDVFARFIMWSF 796
Query: 177 QELFR 181
Q+LFR
Sbjct: 797 QDLFR 801
>AT1G09980.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF676,
hydrolase-like (InterPro:IPR007751); BEST Arabidopsis
thaliana protein match is: ZW18 (TAIR:AT1G58350.2); Has
342 Blast hits to 275 proteins in 70 species: Archae -
0; Bacteria - 0; Metazoa - 214; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
| chr1:3256541-3260866 REVERSE
Length = 802
Score = 295 bits (756), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 134/185 (72%), Positives = 161/185 (87%), Gaps = 4/185 (2%)
Query: 1 SIMEPFRRHLYTYISLSGPQLGYLYSSNSLFNSGMWFMKKFRGTQCIHQLTFTDDPNLKN 60
S+M+P+R++ +TYISLSGP LGYLYSSNSLFNSG+W +KK + TQ IHQLT TDDP+L+N
Sbjct: 618 SLMDPYRKYFHTYISLSGPHLGYLYSSNSLFNSGLWLLKKLKSTQVIHQLTLTDDPDLQN 677
Query: 61 TFFYRLCEQKTLENFRHIILISSPQDGYVPYHSARIELCRAASLDYSRKGRIFLEMLNNC 120
TFFY+LC+QKTL +F++IIL+SSPQDGYVPYHSARIE C+ AS D S++G FLEMLNNC
Sbjct: 678 TFFYKLCKQKTLCSFKNIILLSSPQDGYVPYHSARIESCQPASFDNSKRGVAFLEMLNNC 737
Query: 121 LDQIRAPTSQP----RVFMRCDVNFDTSNHGRNFNSFIGRTAHIEFLESDIFARFIMWSF 176
+DQIR P+ + RVFMRCDVNFDT+ +GRN NSFIGR AHIEFLESD+FARFIMWSF
Sbjct: 738 MDQIRGPSPETPHHQRVFMRCDVNFDTTLYGRNLNSFIGRAAHIEFLESDVFARFIMWSF 797
Query: 177 QELFR 181
Q+LFR
Sbjct: 798 QDLFR 802