Jatropha Genome Database

JcCA0154641.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154641.20 - phase: 0 
         (398 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48220.1 | Symbols:  | indole-3-glycerol phosphate synthase, ...   513   e-146
AT2G04400.1 | Symbols:  | indole-3-glycerol phosphate synthase (...   495   e-140
AT5G48220.2 | Symbols:  | indole-3-glycerol phosphate synthase, ...   495   e-140

>AT5G48220.1 | Symbols:  | indole-3-glycerol phosphate synthase,
           putative | chr5:19549930-19552046 FORWARD
          Length = 379

 Score =  513 bits (1322), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 256/373 (68%), Positives = 297/373 (79%), Gaps = 19/373 (5%)

Query: 29  MNLHTGVNR-FSVASIKAQQAETKEGSATVSAAVKEEVPAATVENALEVK--EWEVGMLQ 85
            NLH  + R  S A ++AQ++   EGS                ++ALE K  E EVGM Q
Sbjct: 23  FNLHNTLTRPSSYAPLRAQKSGITEGS----------------DSALEAKVSEQEVGMYQ 66

Query: 86  NEVAASQXXXXXXXXXXXXXLHYVGPFEFRIQNEGNTPRNILEEIVWNKDIEVSQLKERK 145
           NEV  SQ             LHYVGPFEFR+QNEGNTPRNILEEIVW+KD EV+Q+KERK
Sbjct: 67  NEVVESQGIRIRRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWHKDKEVAQMKERK 126

Query: 146 PLSSLKKSLDNAPPARDFIGALKEANIRTGFPGLIAEVKKASPSRGIIREDFDPVEIAQA 205
           PL SLKK+LDN PPA+DFIGAL+ A+ RTG PGLIAEVKKASPSRGI+REDF+PVEIAQA
Sbjct: 127 PLYSLKKALDNVPPAKDFIGALRSAHQRTGLPGLIAEVKKASPSRGILREDFNPVEIAQA 186

Query: 206 YEKGGAACLSVLTDEKYFKGSFENLEAIRNAGVKCPLLCKEFVIDAWQIYYARTKGADAI 265
           YEKGGAACLSVLTD+KYFKGS+ENL+AI  AGVKCPLL KEF+++AWQIYY R+KGADA+
Sbjct: 187 YEKGGAACLSVLTDDKYFKGSYENLQAIMEAGVKCPLLLKEFIVEAWQIYYGRSKGADAV 246

Query: 266 LLIAAVLPDLDIRYMTKICKMLGLAALVEVHDEREMDRVXXXXXXXXXXXNNRDLETFKV 325
           LLIA+VLPDLDI+YM KICK+LG+A LVEVHDEREMDRV           NNR+LETF+V
Sbjct: 247 LLIASVLPDLDIKYMIKICKILGMATLVEVHDEREMDRVLAIEGVELIGINNRNLETFEV 306

Query: 326 DISNTKKLLQGERGEQIRQKGIIVVGESGLFTPEDIAYVQEAGVKAVLVGESIVKQSDPG 385
           D+  TKKLL+GERGE IRQK I+VVGESGLFTPEDIA+VQEAGVKAVLVGES++KQSDPG
Sbjct: 307 DLGITKKLLEGERGELIRQKDILVVGESGLFTPEDIAFVQEAGVKAVLVGESLIKQSDPG 366

Query: 386 KGIAGLFGKDISQ 398
           K I+ LFG+D+S+
Sbjct: 367 KAISTLFGRDVSE 379


>AT2G04400.1 | Symbols:  | indole-3-glycerol phosphate synthase
           (IGPS) | chr2:1531208-1533578 FORWARD
          Length = 402

 Score =  495 bits (1274), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 259/407 (63%), Positives = 309/407 (75%), Gaps = 15/407 (3%)

Query: 1   MEGLVS-PRVSIKI-TPALYH-RPKFSIKRS-----MNLHTGVNRFSVASIKAQQAETKE 52
           MEGLV   R+ IK+ +P+LY      SI+RS     M+        S  SI+AQQ++ KE
Sbjct: 1   MEGLVPVQRLPIKVASPSLYRCNNSVSIRRSISGFAMDRKINFRAPSQFSIRAQQSDLKE 60

Query: 53  GSATVSAAVKEEVPAATVENALEVKEWEVGMLQNEVAASQXXXXXXXXXXXXXLHYVGPF 112
             A  S++V+++       N L +KEWEV M Q E+A SQ             L Y GPF
Sbjct: 61  SLAVSSSSVEDK------GNVLRIKEWEVEMYQEELAISQGIRIRRKPPSKAPLGYSGPF 114

Query: 113 EFRIQN-EGNTPRNILEEIVWNKDIEVSQLKERKPLSSLKKSLDNAPPARDFIGALKEAN 171
           E R+ N + ++PRNILEEI W KD+EVS++KE  PL  LKK++++APP RDF+GAL+ A+
Sbjct: 115 ELRLHNNDADSPRNILEEITWYKDVEVSRMKELNPLDVLKKAVEDAPPTRDFVGALRMAH 174

Query: 172 IRTGFPGLIAEVKKASPSRGIIREDFDPVEIAQAYEKGGAACLSVLTDEKYFKGSFENLE 231
            RTGFPGLIAEVKKASPSRGI++E+FDPVEIAQAYEKGGAACLSVLTD+KYF+G FENLE
Sbjct: 175 KRTGFPGLIAEVKKASPSRGILKENFDPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLE 234

Query: 232 AIRNAGVKCPLLCKEFVIDAWQIYYARTKGADAILLIAAVLPDLDIRYMTKICKMLGLAA 291
           AIR+AGVKCPLLCKEFV+D WQIYYARTKGADA+LLIAAVL DL+I ++ KICK L LAA
Sbjct: 235 AIRSAGVKCPLLCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAA 294

Query: 292 LVEVHDEREMDRVXXXXXXXXXXXNNRDLETFKVDISNTKKLLQGERGEQIRQKGIIVVG 351
           LVEVHDEREM RV           NNR LETF+VDISNTKKLL+GE G QIR++ +IVVG
Sbjct: 295 LVEVHDEREMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVG 354

Query: 352 ESGLFTPEDIAYVQEAGVKAVLVGESIVKQSDPGKGIAGLFGKDISQ 398
           ESGLFTP+DIAYVQ AGVKAVLVGESIVKQ+DP KGIAGLFG++IS 
Sbjct: 355 ESGLFTPDDIAYVQAAGVKAVLVGESIVKQNDPEKGIAGLFGRNISH 401


>AT5G48220.2 | Symbols:  | indole-3-glycerol phosphate synthase,
           putative | chr5:19550439-19552046 FORWARD
          Length = 316

 Score =  495 bits (1274), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 237/316 (75%), Positives = 271/316 (85%)

Query: 83  MLQNEVAASQXXXXXXXXXXXXXLHYVGPFEFRIQNEGNTPRNILEEIVWNKDIEVSQLK 142
           M QNEV  SQ             LHYVGPFEFR+QNEGNTPRNILEEIVW+KD EV+Q+K
Sbjct: 1   MYQNEVVESQGIRIRRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWHKDKEVAQMK 60

Query: 143 ERKPLSSLKKSLDNAPPARDFIGALKEANIRTGFPGLIAEVKKASPSRGIIREDFDPVEI 202
           ERKPL SLKK+LDN PPA+DFIGAL+ A+ RTG PGLIAEVKKASPSRGI+REDF+PVEI
Sbjct: 61  ERKPLYSLKKALDNVPPAKDFIGALRSAHQRTGLPGLIAEVKKASPSRGILREDFNPVEI 120

Query: 203 AQAYEKGGAACLSVLTDEKYFKGSFENLEAIRNAGVKCPLLCKEFVIDAWQIYYARTKGA 262
           AQAYEKGGAACLSVLTD+KYFKGS+ENL+AI  AGVKCPLL KEF+++AWQIYY R+KGA
Sbjct: 121 AQAYEKGGAACLSVLTDDKYFKGSYENLQAIMEAGVKCPLLLKEFIVEAWQIYYGRSKGA 180

Query: 263 DAILLIAAVLPDLDIRYMTKICKMLGLAALVEVHDEREMDRVXXXXXXXXXXXNNRDLET 322
           DA+LLIA+VLPDLDI+YM KICK+LG+A LVEVHDEREMDRV           NNR+LET
Sbjct: 181 DAVLLIASVLPDLDIKYMIKICKILGMATLVEVHDEREMDRVLAIEGVELIGINNRNLET 240

Query: 323 FKVDISNTKKLLQGERGEQIRQKGIIVVGESGLFTPEDIAYVQEAGVKAVLVGESIVKQS 382
           F+VD+  TKKLL+GERGE IRQK I+VVGESGLFTPEDIA+VQEAGVKAVLVGES++KQS
Sbjct: 241 FEVDLGITKKLLEGERGELIRQKDILVVGESGLFTPEDIAFVQEAGVKAVLVGESLIKQS 300

Query: 383 DPGKGIAGLFGKDISQ 398
           DPGK I+ LFG+D+S+
Sbjct: 301 DPGKAISTLFGRDVSE 316