Jatropha Genome Database

JcCA0154411.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154411.30 + phase: 0 /partial/short
         (48 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G62040.1 | Symbols: ATG8C | ATG8C (autophagy 8c); microtubule...    91   1e-19
AT2G05630.1 | Symbols: ATG8D | autophagy 8d (APG8d) | chr2:20832...    86   5e-18
AT4G16520.2 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule...    82   1e-16
AT4G16520.1 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule...    82   1e-16
AT4G21980.2 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8...    80   2e-16
AT4G21980.1 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8...    80   2e-16
AT4G04620.2 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule...    74   1e-14
AT4G04620.1 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule...    74   1e-14
AT2G45170.2 | Symbols: ATATG8E | AtATG8e; microtubule binding | ...    69   7e-13
AT2G45170.1 | Symbols: ATATG8E, ATG8E | AtATG8e; microtubule bin...    69   7e-13
AT3G60640.1 | Symbols: ATG8G | ATG8G (AUTOPHAGY 8G); microtubule...    68   9e-13
AT2G05630.2 | Symbols: ATG8D | autophagy 8d (APG8d) | chr2:20832...    68   1e-12
AT3G15580.1 | Symbols: ATG8I, APG8H | APG8H (AUTOPHAGY 8H); APG8...    47   2e-06
AT3G06420.1 | Symbols: ATG8H | ATG8H (autophagy 8h); microtubule...    45   7e-06

>AT1G62040.1 | Symbols: ATG8C | ATG8C (autophagy 8c); microtubule
          binding | chr1:22933216-22934253 FORWARD
          Length = 119

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/48 (89%), Positives = 46/48 (95%)

Query: 1  MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          MA SSFKLEHPLERRQ ES+RIREKYPDRIPVIVERAERSD+P+IDKK
Sbjct: 1  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKK 48


>AT2G05630.1 | Symbols: ATG8D | autophagy 8d (APG8d) |
          chr2:2083211-2084775 REVERSE
          Length = 120

 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 46/48 (95%)

Query: 1  MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          MA SSFK EHPLE+RQAE+ARIREKYPDRIPVIVERAE+SD+PDID+K
Sbjct: 1  MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRK 48


>AT4G16520.2 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule
          binding | chr4:9306882-9308113 REVERSE
          Length = 121

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/48 (83%), Positives = 45/48 (93%)

Query: 1  MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          MAKSSFK EH LE+R+AE+ARIREKYPDRIPVIVE+AE+SDIP IDKK
Sbjct: 1  MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKK 48


>AT4G16520.1 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule
          binding | chr4:9306882-9308113 REVERSE
          Length = 121

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/48 (83%), Positives = 45/48 (93%)

Query: 1  MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          MAKSSFK EH LE+R+AE+ARIREKYPDRIPVIVE+AE+SDIP IDKK
Sbjct: 1  MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKK 48


>AT4G21980.2 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8
          activating enzyme/ APG8-specific protease/ Atg8 ligase
          | chr4:11655868-11656809 FORWARD
          Length = 137

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/48 (77%), Positives = 44/48 (91%)

Query: 1  MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          MAKSSFK+ +PLE R +ES+RIREKYPDRIPVIVE+A +SD+PDIDKK
Sbjct: 16 MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKK 63


>AT4G21980.1 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8
          activating enzyme/ APG8-specific protease/ Atg8 ligase
          | chr4:11655913-11656809 FORWARD
          Length = 122

 Score = 80.1 bits (196), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/48 (77%), Positives = 44/48 (91%)

Query: 1  MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          MAKSSFK+ +PLE R +ES+RIREKYPDRIPVIVE+A +SD+PDIDKK
Sbjct: 1  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKK 48


>AT4G04620.2 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule
          binding | chr4:2328663-2329926 REVERSE
          Length = 122

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 41/48 (85%)

Query: 1  MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          M K+SFKL +PLE R AES RIR KYP+R+PVIVE+A +SD+PDIDKK
Sbjct: 1  MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKK 48


>AT4G04620.1 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule
          binding | chr4:2328663-2329926 REVERSE
          Length = 122

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 41/48 (85%)

Query: 1  MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          M K+SFKL +PLE R AES RIR KYP+R+PVIVE+A +SD+PDIDKK
Sbjct: 1  MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKK 48


>AT2G45170.2 | Symbols: ATATG8E | AtATG8e; microtubule binding |
          chr2:18624545-18625526 FORWARD
          Length = 122

 Score = 68.6 bits (166), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 43/49 (87%), Gaps = 1/49 (2%)

Query: 1  MAKSS-FKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          M K S FK+++  E+R+AE+ RIREKYPDRIPVIVE+AE+S++P+IDKK
Sbjct: 1  MNKGSIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKK 49


>AT2G45170.1 | Symbols: ATATG8E, ATG8E | AtATG8e; microtubule
          binding | chr2:18624545-18625526 FORWARD
          Length = 122

 Score = 68.6 bits (166), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 43/49 (87%), Gaps = 1/49 (2%)

Query: 1  MAKSS-FKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          M K S FK+++  E+R+AE+ RIREKYPDRIPVIVE+AE+S++P+IDKK
Sbjct: 1  MNKGSIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKK 49


>AT3G60640.1 | Symbols: ATG8G | ATG8G (AUTOPHAGY 8G); microtubule
          binding | chr3:22416118-22416971 FORWARD
          Length = 121

 Score = 68.2 bits (165), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 41/48 (85%)

Query: 1  MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          M+  SF+ +H  E+R+AE+ RIREKY DR+PVIVE++E+SDIP+IDKK
Sbjct: 1  MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKK 48


>AT2G05630.2 | Symbols: ATG8D | autophagy 8d (APG8d) |
          chr2:2083211-2084775 REVERSE
          Length = 164

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 37/37 (100%)

Query: 12 LERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          L++RQAE+ARIREKYPDRIPVIVERAE+SD+PDID+K
Sbjct: 56 LKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRK 92


>AT3G15580.1 | Symbols: ATG8I, APG8H | APG8H (AUTOPHAGY 8H); APG8
          activating enzyme/ APG8-specific protease/ Atg8 ligase/
          microtubule binding | chr3:5274075-5275000 REVERSE
          Length = 115

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 31/44 (70%)

Query: 5  SFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          SFK ++ L+ R AES  I  KYP RIPVI E+  ++D+P I+KK
Sbjct: 3  SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKK 46


>AT3G06420.1 | Symbols: ATG8H | ATG8H (autophagy 8h); microtubule
          binding | chr3:1955219-1956274 REVERSE
          Length = 119

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 29/44 (65%)

Query: 5  SFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKK 48
          SFK +   + R  ES  I  KYPDRIPVI+E+   +D+PD++K 
Sbjct: 7  SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKN 50