Jatropha Genome Database

JcCA0154191.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154191.30 - phase: 1 /partial
         (57 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37700.1 | Symbols:  | catalytic/ iron ion binding / oxidored...    68   1e-12
AT1G02205.1 | Symbols: CER1 | CER1 (ECERIFERUM 1); octadecanal d...    63   5e-11
AT1G02205.2 | Symbols: CER1 | CER1 (ECERIFERUM 1); octadecanal d...    62   1e-10
AT1G02190.2 | Symbols:  | CER1 protein, putative | chr1:415154-4...    61   1e-10
AT1G02190.1 | Symbols:  | CER1 protein, putative | chr1:415154-4...    61   1e-10

>AT2G37700.1 | Symbols:  | catalytic/ iron ion binding /
           oxidoreductase | chr2:15810581-15814176 REVERSE
          Length = 613

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 3/53 (5%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGY---SMYHIDKVWQAALRHGFKPLSIVS 50
           RRVMSAWRV GIVHALE WK  ECG    S+ +  +VW+AALR+GF+PL + S
Sbjct: 558 RRVMSAWRVGGIVHALEGWKEHECGLDDNSIINPPRVWEAALRNGFQPLLLPS 610


>AT1G02205.1 | Symbols: CER1 | CER1 (ECERIFERUM 1); octadecanal
           decarbonylase | chr1:419650-422154 FORWARD
          Length = 461

 Score = 62.8 bits (151), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/48 (58%), Positives = 37/48 (77%), Gaps = 2/48 (4%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGYSMY--HIDKVWQAALRHGFKPL 46
           R+ MSA RVAGI+HALE W++ ECG S+    +D+VW+A L HGF+PL
Sbjct: 409 RKAMSATRVAGILHALEGWEMHECGTSLLLSDLDQVWEACLSHGFQPL 456


>AT1G02205.2 | Symbols: CER1 | CER1 (ECERIFERUM 1); octadecanal
           decarbonylase | chr1:418818-422154 FORWARD
          Length = 625

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/48 (58%), Positives = 37/48 (77%), Gaps = 2/48 (4%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGYSMY--HIDKVWQAALRHGFKPL 46
           R+ MSA RVAGI+HALE W++ ECG S+    +D+VW+A L HGF+PL
Sbjct: 573 RKAMSATRVAGILHALEGWEMHECGTSLLLSDLDQVWEACLSHGFQPL 620


>AT1G02190.2 | Symbols:  | CER1 protein, putative |
           chr1:415154-417796 FORWARD
          Length = 623

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 2/48 (4%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGYS--MYHIDKVWQAALRHGFKPL 46
           RRVMSAW++ GIVHALE W+  +CG +  +  +  +W+AALRH F+PL
Sbjct: 571 RRVMSAWKIGGIVHALEGWEEHDCGNTCNVLRLHAIWEAALRHDFQPL 618


>AT1G02190.1 | Symbols:  | CER1 protein, putative |
           chr1:415154-417796 FORWARD
          Length = 627

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 2/48 (4%)

Query: 1   RRVMSAWRVAGIVHALEEWKVDECGYS--MYHIDKVWQAALRHGFKPL 46
           RRVMSAW++ GIVHALE W+  +CG +  +  +  +W+AALRH F+PL
Sbjct: 575 RRVMSAWKIGGIVHALEGWEEHDCGNTCNVLRLHAIWEAALRHDFQPL 622