Jatropha Genome Database

JcCA0154191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154191.10 + phase: 0 /partial
         (169 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G26667.1 | Symbols: PYR6 | PYR6; cytidylate kinase/ uridylate...   224   2e-59
AT5G26667.3 | Symbols: PYR6 | PYR6; cytidylate kinase/ uridylate...   215   1e-56
AT5G26667.2 | Symbols: PYR6 | PYR6; cytidylate kinase/ uridylate...   215   1e-56
AT3G60180.1 | Symbols:  | uridylate kinase, putative / uridine m...   193   4e-50
AT3G60180.2 | Symbols:  | uridylate kinase, putative / uridine m...   193   4e-50
AT3G60961.1 | Symbols:  | ATP binding / nucleobase, nucleoside, ...   179   6e-46
AT4G25280.1 | Symbols:  | adenylate kinase family protein | chr4...   144   3e-35

>AT5G26667.1 | Symbols: PYR6 | PYR6; cytidylate kinase/ uridylate
           kinase | chr5:9276659-9277788 FORWARD
          Length = 208

 Score =  224 bits (572), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 110/148 (74%), Positives = 126/148 (85%)

Query: 22  TMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPEFV 81
           TMIQNMIKEGKIVPSEVTIKLLQKA++E+GNDKFLIDGFPRNEENRAAFE VT+IEP+FV
Sbjct: 61  TMIQNMIKEGKIVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEPKFV 120

Query: 82  LFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDAGK 141
           LFFDC            NQGREDDNIETIRKRF+VFLESS+PV+ YYE+KG+VRKI+A K
Sbjct: 121 LFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAK 180

Query: 142 SVEEVFEAVKSIFTQKDEKVKGHRCAIL 169
            +E VFE VK+IF+ + EKVK + CAIL
Sbjct: 181 PIEAVFEEVKAIFSPEAEKVKLNSCAIL 208


>AT5G26667.3 | Symbols: PYR6 | PYR6; cytidylate kinase/ uridylate
           kinase | chr5:9276659-9278091 FORWARD
          Length = 202

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/140 (75%), Positives = 120/140 (85%)

Query: 22  TMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPEFV 81
           TMIQNMIKEGKIVPSEVTIKLLQKA++E+GNDKFLIDGFPRNEENRAAFE VT+IEP+FV
Sbjct: 61  TMIQNMIKEGKIVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEPKFV 120

Query: 82  LFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDAGK 141
           LFFDC            NQGREDDNIETIRKRF+VFLESS+PV+ YYE+KG+VRKI+A K
Sbjct: 121 LFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAK 180

Query: 142 SVEEVFEAVKSIFTQKDEKV 161
            +E VFE VK+IF+ + EKV
Sbjct: 181 PIEAVFEEVKAIFSPEAEKV 200


>AT5G26667.2 | Symbols: PYR6 | PYR6; cytidylate kinase/ uridylate
           kinase | chr5:9276659-9278091 FORWARD
          Length = 202

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/140 (75%), Positives = 120/140 (85%)

Query: 22  TMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPEFV 81
           TMIQNMIKEGKIVPSEVTIKLLQKA++E+GNDKFLIDGFPRNEENRAAFE VT+IEP+FV
Sbjct: 61  TMIQNMIKEGKIVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEPKFV 120

Query: 82  LFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDAGK 141
           LFFDC            NQGREDDNIETIRKRF+VFLESS+PV+ YYE+KG+VRKI+A K
Sbjct: 121 LFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAK 180

Query: 142 SVEEVFEAVKSIFTQKDEKV 161
            +E VFE VK+IF+ + EKV
Sbjct: 181 PIEAVFEEVKAIFSPEAEKV 200


>AT3G60180.1 | Symbols:  | uridylate kinase, putative / uridine
           monophosphate kinase, putative / UMP kinase, putative |
           chr3:22242781-22244015 REVERSE
          Length = 204

 Score =  193 bits (491), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 91/138 (65%), Positives = 111/138 (80%)

Query: 20  YRTMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPE 79
           +  MIQ+MI EG+IVPSE+T+KLL KAM ESGNDKFLIDGFPRNEENR  FE+V +IEP 
Sbjct: 66  FGAMIQSMIAEGRIVPSEITVKLLCKAMEESGNDKFLIDGFPRNEENRNVFENVARIEPA 125

Query: 80  FVLFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDA 139
           FVLFFDC            NQGREDDNIETI+KRF+VF+ES++P++ YYESKG++RKI+A
Sbjct: 126 FVLFFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVESTLPIISYYESKGKLRKINA 185

Query: 140 GKSVEEVFEAVKSIFTQK 157
            KS EEVFEAV+ +F  +
Sbjct: 186 AKSSEEVFEAVRVLFASE 203


>AT3G60180.2 | Symbols:  | uridylate kinase, putative / uridine
           monophosphate kinase, putative / UMP kinase, putative |
           chr3:22242781-22244015 REVERSE
          Length = 204

 Score =  193 bits (491), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 91/138 (65%), Positives = 111/138 (80%)

Query: 20  YRTMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPE 79
           +  MIQ+MI EG+IVPSE+T+KLL KAM ESGNDKFLIDGFPRNEENR  FE+V +IEP 
Sbjct: 66  FGAMIQSMIAEGRIVPSEITVKLLCKAMEESGNDKFLIDGFPRNEENRNVFENVARIEPA 125

Query: 80  FVLFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDA 139
           FVLFFDC            NQGREDDNIETI+KRF+VF+ES++P++ YYESKG++RKI+A
Sbjct: 126 FVLFFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVESTLPIISYYESKGKLRKINA 185

Query: 140 GKSVEEVFEAVKSIFTQK 157
            KS EEVFEAV+ +F  +
Sbjct: 186 AKSSEEVFEAVRVLFASE 203


>AT3G60961.1 | Symbols:  | ATP binding / nucleobase, nucleoside,
           nucleotide kinase | chr3:22541319-22552253 FORWARD
          Length = 136

 Score =  179 bits (455), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 106/135 (78%), Gaps = 4/135 (2%)

Query: 27  MIKEGKIVPSEVTIKLLQKAMRES----GNDKFLIDGFPRNEENRAAFESVTKIEPEFVL 82
           MI EG+IVPSE+T+KLL KAM ES    GNDKFLIDGFPRNEENR  FE+V +IEP FVL
Sbjct: 1   MIAEGRIVPSEITVKLLCKAMEESFQVSGNDKFLIDGFPRNEENRIVFENVARIEPAFVL 60

Query: 83  FFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDAGKS 142
           FFDC            NQGREDDNIETI+KRF+VF+ES++P++ YY+SKG++RKI+A KS
Sbjct: 61  FFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVESTLPIISYYQSKGKLRKINAAKS 120

Query: 143 VEEVFEAVKSIFTQK 157
            EEVFEAV+ +F  +
Sbjct: 121 SEEVFEAVRVLFASE 135


>AT4G25280.1 | Symbols:  | adenylate kinase family protein |
           chr4:12939068-12940723 REVERSE
          Length = 249

 Score =  144 bits (363), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/133 (51%), Positives = 94/133 (70%)

Query: 22  TMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPEFV 81
            MI N+IK+GKIVPSEVT+KL+QK +  S N KFLIDGFPR EENR AFE + + +P+ V
Sbjct: 90  AMILNLIKDGKIVPSEVTVKLIQKELESSDNRKFLIDGFPRTEENRVAFERIIRADPDVV 149

Query: 82  LFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDAGK 141
           LFFDC            NQGR DDNI T++KR ++F   + PV++YY++KG++  I+A  
Sbjct: 150 LFFDCPEEEMVKRVLNRNQGRIDDNITTMKKRLKIFNALNRPVIDYYKNKGKLYTINAVG 209

Query: 142 SVEEVFEAVKSIF 154
           +V+++F+ V  IF
Sbjct: 210 TVDDIFQHVLPIF 222