Jatropha Genome Database

JcCA0154181.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154181.30 + phase: 0 
         (161 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58770.1 | Symbols:  | dehydrodolichyl diphosphate synthase, ...   125   8e-30
AT5G58782.1 | Symbols:  | dehydrodolichyl diphosphate synthase, ...   112   1e-25
AT5G58780.1 | Symbols:  | dehydrodolichyl diphosphate synthase, ...   110   4e-25
AT2G23400.1 | Symbols:  | dehydrodolichyl diphosphate synthase, ...   102   7e-23
AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis cis-prenyltransf...   100   4e-22
AT5G58784.1 | Symbols:  | dehydrodolichyl diphosphate synthase |...    97   5e-21
AT2G17570.1 | Symbols:  | undecaprenyl pyrophosphate synthetase ...    77   5e-15
AT5G60510.1 | Symbols:  | undecaprenyl pyrophosphate synthetase ...    54   5e-08
AT5G60500.1 | Symbols:  | undecaprenyl pyrophosphate synthetase ...    50   5e-07

>AT5G58770.1 | Symbols:  | dehydrodolichyl diphosphate synthase,
           putative / DEDOL-PP synthase, putative |
           chr5:23734396-23735495 FORWARD
          Length = 310

 Score =  125 bits (315), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 56/88 (63%), Positives = 69/88 (78%)

Query: 74  ELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDN 133
           ELMP+HVAIIMDGNGRWA+ +G     GH AG   L +IV+LC +WGI+VLTVFAFS DN
Sbjct: 75  ELMPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDN 134

Query: 134 WTRPQVEVDFLMSLFEKSLKSEINNFVR 161
           W RP++E+DFL SLFE+SLK+E  N  +
Sbjct: 135 WIRPRIEIDFLFSLFERSLKTEFQNLAK 162


>AT5G58782.1 | Symbols:  | dehydrodolichyl diphosphate synthase,
           putative / DEDOL-PP synthase, putative |
           chr5:23738306-23739430 REVERSE
          Length = 289

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 72/107 (67%)

Query: 53  KQEDKSVIEDEIEPLPEDLRPELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDI 112
           K+ DK       E  P++L+ ELMPRHVA+IMDGN RWA+Q G L S G+EAG + L + 
Sbjct: 34  KKIDKGTYVVGEEETPKELQRELMPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEF 93

Query: 113 VKLCWQWGIKVLTVFAFSCDNWTRPQVEVDFLMSLFEKSLKSEINNF 159
             LC++ GI  ++ FAFS +NW R ++EV  LM LF++ LKS+I  F
Sbjct: 94  ADLCFKLGINTVSAFAFSTENWGRHKIEVKCLMYLFQRYLKSKIQFF 140


>AT5G58780.1 | Symbols:  | dehydrodolichyl diphosphate synthase,
           putative / DEDOL-PP synthase, putative |
           chr5:23735755-23737284 REVERSE
          Length = 302

 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 4/122 (3%)

Query: 40  FPQLLATKTDLAVKQEDKSVIEDEIEPLPEDLRPELMPRHVAIIMDGNGRWARQKGGLAS 99
           F ++ +++ D   +Q D+      +E    +L+ ELMPRHVA+IMDGN RWA++ G L S
Sbjct: 38  FIKITSSRDDYDNEQRDEGTYVVGVE----ELQRELMPRHVAVIMDGNRRWAKRAGLLTS 93

Query: 100 MGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWTRPQVEVDFLMSLFEKSLKSEINNF 159
            GHEAG + L +  +LC++ GI  ++ FAFS +NW R ++EV  LMSL +  LKS+I  F
Sbjct: 94  QGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWGRHKIEVKCLMSLIQHYLKSKIQYF 153

Query: 160 VR 161
            R
Sbjct: 154 QR 155


>AT2G23400.1 | Symbols:  | dehydrodolichyl diphosphate synthase,
           putative / DEDOL-PP synthase, putative |
           chr2:9963978-9965229 REVERSE
          Length = 253

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 64/93 (68%)

Query: 69  EDLRPELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFA 128
           E+L+ ELMPRHV+ I+DGN RWA++ G   + GHEAG + + +I ++C++ GI  ++ FA
Sbjct: 29  EELQRELMPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFA 88

Query: 129 FSCDNWTRPQVEVDFLMSLFEKSLKSEINNFVR 161
           FS +NW R + EV  LMSLF   LKS I  F R
Sbjct: 89  FSTENWGRDKFEVKCLMSLFNHYLKSNIQYFQR 121


>AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis
           cis-prenyltransferase); dehydrodolichyl diphosphate
           synthase | chr2:9966247-9967741 REVERSE
          Length = 303

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 1/94 (1%)

Query: 69  EDLRPELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFA 128
           + L+ ELMPRHVA I+DGN RWA++ G   S GHEAG + L DI +LC++ G+  ++ FA
Sbjct: 63  DGLQRELMPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFA 122

Query: 129 FSCDNWTRPQVEVDFLMSLFEKSL-KSEINNFVR 161
           FS +NW R ++E+D LMSL +    KS I  F R
Sbjct: 123 FSTENWGRDKIEIDNLMSLIQHYRNKSNIKFFHR 156


>AT5G58784.1 | Symbols:  | dehydrodolichyl diphosphate synthase |
           chr5:23739950-23741267 REVERSE
          Length = 302

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 4/118 (3%)

Query: 39  RFPQLLATKTDLAVKQEDKSVIEDEIEPLPEDLRPELMPRHVAIIMDGNGRWARQKGGLA 98
           RF +++A+K D   ++ +K     E +    ++    MP+HVA+I+DGN RWA ++G   
Sbjct: 37  RFIKIIASKYDDEEERNEKRGTMGEKQKRGRNI----MPKHVAVILDGNRRWAEKRGLGT 92

Query: 99  SMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWTRPQVEVDFLMSLFEKSLKSEI 156
           S GHEAG R L +  K C+  G   +++FAFS +NW RP+ EV  LM+LFEK L S++
Sbjct: 93  SEGHEAGARRLMENAKDCFAMGTNTISLFAFSTENWERPEDEVKCLMALFEKYLASDM 150


>AT2G17570.1 | Symbols:  | undecaprenyl pyrophosphate synthetase
           family protein / UPP synthetase family protein |
           chr2:7645086-7645973 FORWARD
          Length = 295

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 53/79 (67%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWT 135
           +P H+A IMDGN R+A++ G L   GH+AG   L  +++ C++ GIK +T++AFS DN+ 
Sbjct: 39  IPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYCYELGIKYVTIYAFSIDNFR 98

Query: 136 RPQVEVDFLMSLFEKSLKS 154
           R   EV+ +M L  + +KS
Sbjct: 99  RKPEEVESVMDLMLEKIKS 117


>AT5G60510.1 | Symbols:  | undecaprenyl pyrophosphate synthetase
           family protein / UPP synthetase family protein |
           chr5:24330721-24331539 FORWARD
          Length = 272

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 3/92 (3%)

Query: 71  LRPELMPRHVAIIMDGNGRWARQKG--GLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFA 128
           LR   +P +++ IMDGN R+A+++   GL + GH AG  ++  I++ C + G+  +T++A
Sbjct: 30  LRVGPIPTNISFIMDGNRRFAKKRNLEGLDA-GHRAGFISVKYILQYCKEIGVPYVTLYA 88

Query: 129 FSCDNWTRPQVEVDFLMSLFEKSLKSEINNFV 160
           F  DN+ R   EV  +M L  + ++  I+  V
Sbjct: 89  FGMDNFKRGPEEVKCVMDLMLEKVELTIDQAV 120


>AT5G60500.1 | Symbols:  | undecaprenyl pyrophosphate synthetase
           family protein / UPP synthetase family protein |
           chr5:24328815-24329630 FORWARD
          Length = 271

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLA-SMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNW 134
           +P +++ IMDGN R+A++   +    GH AG  ++  I++ C + G+  +T+ AF  DN+
Sbjct: 34  IPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCKEIGVPYVTLHAFGMDNF 93

Query: 135 TRPQVEVDFLMSLFEKSLKSEINNFV 160
            R   EV  +M L  + ++  I+  V
Sbjct: 94  KRGPEEVKCVMDLMLEKVELAIDQAV 119