Jatropha Genome Database

JcCA0154091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154091.10 + phase: 2 /partial
         (138 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05270.2 | Symbols:  | chalcone-flavanone isomerase family pr...   160   2e-40
AT5G05270.1 | Symbols:  | chalcone-flavanone isomerase family pr...   160   2e-40

>AT5G05270.2 | Symbols:  | chalcone-flavanone isomerase family
           protein | chr5:1563543-1564827 FORWARD
          Length = 209

 Score =  160 bits (406), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/137 (57%), Positives = 98/137 (71%)

Query: 1   DDFFEALIAAPVEKFLRVVVIKEIKGSQYGVQLESAVRDRXXXXXXXXXXXXXXXXXXXX 60
           DDFF+AL +A +EK +RVVVIKEIKG+QYGVQLE+ VRDR                    
Sbjct: 73  DDFFDALASAEMEKVIRVVVIKEIKGAQYGVQLENTVRDRLAEEDKYEEEEETELEKVVG 132

Query: 61  FFQSKYFKKDSIITFHFPATSPTAEIAFSTEGKEESKLKVENANVVEMIKKWYLGGTRGV 120
           FFQSKYFK +S+IT+HF A     EI F TEGKEE KLKVENANVV M+++WYL G+RGV
Sbjct: 133 FFQSKYFKANSVITYHFSAKDGICEIGFETEGKEEEKLKVENANVVGMMQRWYLSGSRGV 192

Query: 121 SATTITSLANTLSAELS 137
           S +TI S+A+++SA L+
Sbjct: 193 SPSTIVSIADSISAVLT 209


>AT5G05270.1 | Symbols:  | chalcone-flavanone isomerase family
           protein | chr5:1563492-1564827 FORWARD
          Length = 209

 Score =  160 bits (406), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/137 (57%), Positives = 98/137 (71%)

Query: 1   DDFFEALIAAPVEKFLRVVVIKEIKGSQYGVQLESAVRDRXXXXXXXXXXXXXXXXXXXX 60
           DDFF+AL +A +EK +RVVVIKEIKG+QYGVQLE+ VRDR                    
Sbjct: 73  DDFFDALASAEMEKVIRVVVIKEIKGAQYGVQLENTVRDRLAEEDKYEEEEETELEKVVG 132

Query: 61  FFQSKYFKKDSIITFHFPATSPTAEIAFSTEGKEESKLKVENANVVEMIKKWYLGGTRGV 120
           FFQSKYFK +S+IT+HF A     EI F TEGKEE KLKVENANVV M+++WYL G+RGV
Sbjct: 133 FFQSKYFKANSVITYHFSAKDGICEIGFETEGKEEEKLKVENANVVGMMQRWYLSGSRGV 192

Query: 121 SATTITSLANTLSAELS 137
           S +TI S+A+++SA L+
Sbjct: 193 SPSTIVSIADSISAVLT 209