Jatropha Genome Database

JcCA0153671.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153671.20 - phase: 0 
         (279 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17770.1 | Symbols: ATCBR, CBR1 | ATCBR (ARABIDOPSIS THALIANA...   437   e-123
AT5G20080.1 | Symbols:  | NADH-cytochrome b5 reductase, putative...   218   4e-57
AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |...   178   3e-45
AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE...   168   3e-42

>AT5G17770.1 | Symbols: ATCBR, CBR1 | ATCBR (ARABIDOPSIS THALIANA
           NADH:CYTOCHROME B5 REDUCTASE 1); cytochrome-b5 reductase
           | chr5:5864543-5866495 REVERSE
          Length = 281

 Score =  437 bits (1124), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 202/252 (80%), Positives = 223/252 (88%)

Query: 28  YLYITSKKPKGCLDPQNFKEFKLVKRTQLSHNVAKFKFALPTPTSVLGLPIGQHMSCRGK 87
           Y   +SKK + CLDP+NFKEFKLVKR QLSHNVAKF F LPT TSVLGLPIGQH+SCRGK
Sbjct: 30  YFLTSSKKRRVCLDPENFKEFKLVKRHQLSHNVAKFVFELPTSTSVLGLPIGQHISCRGK 89

Query: 88  DSLGEEVAKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYQ 147
           D  GE+V KPYTPTTLDSD+G FELVIKMYPQGRMSHHFREMR GD+LAVKGPKGRFKYQ
Sbjct: 90  DGQGEDVIKPYTPTTLDSDVGRFELVIKMYPQGRMSHHFREMRVGDHLAVKGPKGRFKYQ 149

Query: 148 PNQVRVFGMLAGGTGITPMFQVTRAILENPNDKTNIHLIYANVTYEDILLKEELDNLANN 207
           P Q R FGMLAGG+GITPMFQV RAILENP DKT +HLIYANVTY+DILLKEEL+ L  N
Sbjct: 150 PGQFRAFGMLAGGSGITPMFQVARAILENPTDKTKVHLIYANVTYDDILLKEELEGLTTN 209

Query: 208 FPNRFSVYYVLNQPPEGWDGGIGFVSKEMIEKHCPAPAPDVQILRCGPPPMNKAMAAHLE 267
           +P +F ++YVLNQPPE WDGG+GFVSKEMI+ HCPAPA D+QILRCGPPPMNKAMAA+LE
Sbjct: 210 YPEQFKIFYVLNQPPEVWDGGVGFVSKEMIQTHCPAPASDIQILRCGPPPMNKAMAANLE 269

Query: 268 ALGYTSQMQFQF 279
           ALGY+ +MQFQF
Sbjct: 270 ALGYSPEMQFQF 281


>AT5G20080.1 | Symbols:  | NADH-cytochrome b5 reductase, putative |
           chr5:6782708-6786360 FORWARD
          Length = 328

 Score =  218 bits (554), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/294 (41%), Positives = 172/294 (58%), Gaps = 34/294 (11%)

Query: 17  ALFAIGAGTAYYLYITSKK-------------PKGCLDPQNFKEFKLVKRTQLSHNVAKF 63
           A+ A+  G +YY Y+TS               PK  L+P  + EFKL    ++SHN   F
Sbjct: 38  AIAALSGGFSYY-YLTSGNNLVYLDQAKEETGPKTALNPDKWLEFKLQDTARVSHNTQLF 96

Query: 64  KFALPTPTSVLGLPIGQHMSCR---GKDSLGEE--VAKPYTPTTLDSDLGYFELVIKMYP 118
           +F+   P++ LGL +   +  R   G ++ G+   V +PYTP +     GYF+L+IK+YP
Sbjct: 97  RFSF-DPSAELGLHVASCLLTRAPLGYNAEGKTKYVIRPYTPISDPEAKGYFDLLIKVYP 155

Query: 119 QGRMSHHFREMREGDYLAVKGPKGRFKYQPNQVRVFGMLAGGTGITPMFQVTRAILENPN 178
            G+MS HF  ++ GD L VKGP  +FKY PN  +  GM+AGG+GITPM QV  AI++NP 
Sbjct: 156 DGKMSQHFASLKPGDVLEVKGPVEKFKYSPNMKKHIGMIAGGSGITPMLQVIDAIVKNPE 215

Query: 179 DKTNIHLIYANVTYEDILLKEELDNLANNFPNRFSVYYVLNQPPEGWDGGIGFVSKEMIE 238
           D T I L+YANV+ +DILLK++LD L  N PN   ++Y ++ P + W GG+G++SK+M  
Sbjct: 216 DNTQISLLYANVSPDDILLKQKLDVLQANHPN-LKIFYTVDNPTKNWKGGVGYISKDMAL 274

Query: 239 KHCPAPAPDVQILRCGPPPMNKAMAAH-------------LEALGYTSQMQFQF 279
           K  P P  D  IL CGPP M + ++               L+ LGYT +M F+F
Sbjct: 275 KGLPLPTDDTLILVCGPPGMMEHISGGKAPDWSQGEVKGILKELGYTEEMVFKF 328


>AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |
           NIA2 (NITRATE REDUCTASE 2); nitrate reductase (NADH)/
           nitrate reductase | chr1:14158617-14161652 FORWARD
          Length = 917

 Score =  178 bits (452), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 152/261 (58%), Gaps = 26/261 (9%)

Query: 40  LDPQNFKEFKLVKRTQLSHNVAKFKFALPTPTSVLGLPIGQH--MSCRGKDSLGEEVAKP 97
           ++P+     +LV++T +SH+V KF+FALP    VLGLP+G+H  +     D L     + 
Sbjct: 657 VNPRAKVPVQLVEKTSISHDVRKFRFALPVEDMVLGLPVGKHIFLCATINDKL---CLRA 713

Query: 98  YTPTTLDSDLGYFELVIKMY-----PQ----GRMSHHFREMREGDYLAVKGPKGRFKY-- 146
           YTP++    +GYFELV+K+Y     P+    G MS +   +  G  L +KGP G  +Y  
Sbjct: 714 YTPSSTVDVVGYFELVVKIYFGGVHPRFPNGGLMSQYLDSLPIGSTLEIKGPLGHVEYLG 773

Query: 147 --------QPNQVRVFGMLAGGTGITPMFQVTRAILENPNDKTNIHLIYANVTYEDILLK 198
                   +P       MLAGGTGITP++Q+ +AIL++P D+T +++IYAN T EDILL+
Sbjct: 774 KGSFTVHGKPKFADKLAMLAGGTGITPVYQIIQAILKDPEDETEMYVIYANRTEEDILLR 833

Query: 199 EELDNLANNFPNRFSVYYVLNQPPEGWDGGIGFVSKEMIEKHCPAPAPDVQI-LRCGPPP 257
           EELD  A  +P+R  V+YV+    EGW    GF+S+ ++ +H P       + + CGPPP
Sbjct: 834 EELDGWAEQYPDRLKVWYVVESAKEGWAYSTGFISEAIMREHIPDGLDGSALAMACGPPP 893

Query: 258 MNK-AMAAHLEALGYTSQMQF 277
           M + A+  +LE + Y  +  F
Sbjct: 894 MIQFAVQPNLEKMQYNIKEDF 914


>AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | NIA1 (NITRATE REDUCTASE
           1); nitrate reductase | chr1:29236005-29239367 REVERSE
          Length = 917

 Score =  168 bits (426), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 153/264 (57%), Gaps = 26/264 (9%)

Query: 31  ITSKKPKGCLDPQNFKEFKLVKRTQLSHNVAKFKFALPTPTSVLGLPIGQHM-SCRG-KD 88
           +T +K    ++P+     +L+++T +SH+V KF+FALP+    LGLP+G+H+  C    D
Sbjct: 648 LTPQKNIALVNPREKIPVRLIEKTSISHDVRKFRFALPSEDQQLGLPVGKHVFVCANIND 707

Query: 89  SLGEEVAKPYTPTTLDSDLGYFELVIKMY-----PQ----GRMSHHFREMREGDYLAVKG 139
            L     + YTPT+    +G+ +LV+K+Y     P+    G MS H   +  G  + +KG
Sbjct: 708 KL---CLRAYTPTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSMIDIKG 764

Query: 140 PKGRFKYQ----------PNQVRVFGMLAGGTGITPMFQVTRAILENPNDKTNIHLIYAN 189
           P G  +Y+          P   +   MLAGGTGITP++Q+ ++IL +P D+T ++++YAN
Sbjct: 765 PLGHIEYKGKGNFLVSGKPKFAKKLAMLAGGTGITPIYQIIQSILSDPEDETEMYVVYAN 824

Query: 190 VTYEDILLKEELDNLANNFPNRFSVYYVLNQPPEGWDGGIGFVSKEMIEKHCPAPAPDVQ 249
            T +DIL++EEL+  A+    R  ++YV+    EGW    GF+++ ++ +H P       
Sbjct: 825 RTEDDILVREELEGWASKHKERLKIWYVVEIAKEGWSYSTGFITEAVLREHIPEGLEGES 884

Query: 250 I-LRCGPPPMNK-AMAAHLEALGY 271
           + L CGPPPM + A+  +LE +GY
Sbjct: 885 LALACGPPPMIQFALQPNLEKMGY 908