Jatropha Genome Database
- JcCA0153601.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0153601.10 - phase: 0
(280 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17570.1 | Symbols: | undecaprenyl pyrophosphate synthetase ... 357 3e-99
AT5G60510.1 | Symbols: | undecaprenyl pyrophosphate synthetase ... 274 4e-74
AT5G60500.1 | Symbols: | undecaprenyl pyrophosphate synthetase ... 269 2e-72
AT5G58770.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 133 1e-31
AT5G58780.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 129 1e-30
AT5G58784.1 | Symbols: | dehydrodolichyl diphosphate synthase |... 127 1e-29
AT5G58782.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 122 2e-28
AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis cis-prenyltransf... 122 2e-28
AT2G23400.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 112 2e-25
>AT2G17570.1 | Symbols: | undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein |
chr2:7645086-7645973 FORWARD
Length = 295
Score = 357 bits (917), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 170/270 (62%), Positives = 218/270 (80%), Gaps = 6/270 (2%)
Query: 16 FIRSCLFHVLSVGPIPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKYCYELGV 75
F R LF V+S+GPIP H+AFIMDGNRR+AKK L G+GHKAGFSALM +L+YCYELG+
Sbjct: 25 FSRRSLFRVISMGPIPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYCYELGI 84
Query: 76 KYVTVYAFSIDNFRRRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNLNLLTEP 135
KYVT+YAFSIDNFRR+PEEV+ VMDLMLEKI+ +L++ES+V+QYGIRVYF+GNL LL +
Sbjct: 85 KYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVYFIGNLALLNDQ 144
Query: 136 VRVAAQKVMKATASNTKCLLFICVAYTSLDEIIHAVHESC--KDKLIKNTIFPDKPCTDA 193
VR AA+KVMKATA N++ +L IC+AY S DEI+ AV +SC K I+ + + +
Sbjct: 145 VRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHEDSDSD 204
Query: 194 IEGEEKDS----IKLVDLEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDA 249
IEG + ++ I+LVD+E++M M++ P PD+LIR+SGE+RLSNFLLWQT + L SP A
Sbjct: 205 IEGTDMENQEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAA 264
Query: 250 LWPEIGLWNLVWAVLNFQRNHSYLEKKKKR 279
LWPEIGL +L+WA+LNFQRNHSYLEK+KK+
Sbjct: 265 LWPEIGLRHLLWAILNFQRNHSYLEKRKKQ 294
>AT5G60510.1 | Symbols: | undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein |
chr5:24330721-24331539 FORWARD
Length = 272
Score = 274 bits (701), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 133/267 (49%), Positives = 182/267 (68%), Gaps = 15/267 (5%)
Query: 13 LASFIRSCLFHVLSVGPIPSHLAFIMDGNRRFAKKEKL-GPGAGHKAGFSALMLILKYCY 71
L S +R +F VL VGPIP++++FIMDGNRRFAKK L G AGH+AGF ++ IL+YC
Sbjct: 18 LMSLMRKFIFKVLRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCK 77
Query: 72 ELGVKYVTVYAFSIDNFRRRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNLNL 131
E+GV YVT+YAF +DNF+R PEEVK VMDLMLEK+E + + N G+R+ F G+LN
Sbjct: 78 EIGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNS 137
Query: 132 LTEPVRVAAQKVMKATASNTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDKPCT 191
L E R A +K+M+ T N ++ +CVAY++ EI+HAV +SC K
Sbjct: 138 LNERFRAATKKLMELTEENRDLIVVVCVAYSTSVEIVHAVRDSCVRK------------- 184
Query: 192 DAIEGEEKDSIKLVDLEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALW 251
+ G+ +++L D+E+ MY ++ P PD+++RT G RLSNF+ WQTS L+ +ALW
Sbjct: 185 -SKTGDGSSALELSDIEECMYTSVVPVPDLVVRTGGGDRLSNFMTWQTSRALLHRTEALW 243
Query: 252 PEIGLWNLVWAVLNFQRNHSYLEKKKK 278
PE+GLW+LVWA+L FQR YL+KKKK
Sbjct: 244 PELGLWHLVWAILKFQRMQDYLQKKKK 270
>AT5G60500.1 | Symbols: | undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein |
chr5:24328815-24329630 FORWARD
Length = 271
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/267 (50%), Positives = 183/267 (68%), Gaps = 15/267 (5%)
Query: 13 LASFIRSCLFHVLSVGPIPSHLAFIMDGNRRFAKKEKL-GPGAGHKAGFSALMLILKYCY 71
L S +R LF VL VGPIP++++FIMDGNRRFAKK L G AGH+AGF ++ IL+YC
Sbjct: 17 LMSLMRKFLFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCK 76
Query: 72 ELGVKYVTVYAFSIDNFRRRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNLNL 131
E+GV YVT++AF +DNF+R PEEVK VMDLMLEK+E + + N G+R+ F G+L+
Sbjct: 77 EIGVPYVTLHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAGDLDS 136
Query: 132 LTEPVRVAAQKVMKATASNTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDKPCT 191
L E R A +K+M+ T N ++ +CVAY++ EI+HAV +SC K CT
Sbjct: 137 LNEHFRAATKKLMELTEENRDLIVVVCVAYSTSLEIVHAVRKSCVRK-----------CT 185
Query: 192 DAIEGEEKDSIKLVDLEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALW 251
+ G++ ++L D+E+ MY ++ P PD++IRT G RLSNF+ WQTS L+ +ALW
Sbjct: 186 N---GDDLVLLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALW 242
Query: 252 PEIGLWNLVWAVLNFQRNHSYLEKKKK 278
PE+GLW+LVWA+L FQR YL KKKK
Sbjct: 243 PELGLWHLVWAILKFQRMQDYLTKKKK 269
>AT5G58770.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr5:23734396-23735495 FORWARD
Length = 310
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 132/252 (52%), Gaps = 23/252 (9%)
Query: 30 IPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKYCYELGVKYVTVYAFSIDNFR 89
+P H+A IMDGN R+AK L P GH+AG AL I++ C + G++ +TV+AFS DN+
Sbjct: 77 MPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWI 136
Query: 90 RRPEEVKIVMDLMLEKIEGILKEE-SVVNQYGIRVYFLGNLNLLTEPVRVAAQKVMKATA 148
R +I +D + E LK E + + +R+ +G+ + L + + +V + T
Sbjct: 137 R----PRIEIDFLFSLFERSLKTEFQNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTK 192
Query: 149 SNTKCLLFICVAYTSLDEIIHA---VHESCKDKLIKNTIFPDKPCTDAIEGEEKDSIKLV 205
+NT+ L + V Y+ +++ A + KD IE EE D +L+
Sbjct: 193 NNTRLQLIVAVGYSGKYDVLQACRGIARRVKD--------------GEIEVEEIDE-RLI 237
Query: 206 DLEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLN 265
+ E P PD+LIRTSGE R+SNFLLWQ ++ L+ LWP+ G + A+++
Sbjct: 238 EEELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALMS 297
Query: 266 FQRNHSYLEKKK 277
FQ+ +K
Sbjct: 298 FQQRQRRFGGRK 309
>AT5G58780.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr5:23735755-23737284 REVERSE
Length = 302
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 128/244 (52%), Gaps = 23/244 (9%)
Query: 30 IPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKYCYELGVKYVTVYAFSIDNFR 89
+P H+A IMDGNRR+AK+ L GH+AG L+ + C++LG+ V+ +AFS +N+
Sbjct: 70 MPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWG 129
Query: 90 RRPEEVKIVMDL----MLEKIEGILKEESVVNQYGIRVYFLGNLNLLTEPVRVAAQKVMK 145
R EVK +M L + KI+ +EE+ RV +GNL + E + Q++ +
Sbjct: 130 RHKIEVKCLMSLIQHYLKSKIQYFQREET-------RVSVIGNLTKIPESLLRTVQEIEE 182
Query: 146 ATASNTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDKPCTDAIEGEEKDSIKLV 205
AT S K L + + Y+ +I+ A CK + K + EE L+
Sbjct: 183 ATRSYKKKHLILAIDYSGRLDILRA----CKSIV--------KKSEKGLIREEDVDEALI 230
Query: 206 DLEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLN 265
+ E P PD+LIRTSGE R+SNF LWQ ++ L+ LWP+ L+ A+++
Sbjct: 231 ERELLTNCTEFPSPDLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLEALVS 290
Query: 266 FQRN 269
+QR
Sbjct: 291 YQRR 294
>AT5G58784.1 | Symbols: | dehydrodolichyl diphosphate synthase |
chr5:23739950-23741267 REVERSE
Length = 302
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 25/231 (10%)
Query: 30 IPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKYCYELGVKYVTVYAFSIDNFR 89
+P H+A I+DGNRR+A+K LG GH+AG LM K C+ +G ++++AFS +N+
Sbjct: 70 MPKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTENWE 129
Query: 90 RRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNLNLLTEPVRVAAQKVMKATAS 149
R +EVK +M L EK + + + I++ +GN L E + ++V +AT S
Sbjct: 130 RPEDEVKCLMAL-FEKY--LASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKS 186
Query: 150 NTKCLLFICVAYTSLDEIIHA---VHESCKDKLIKNTIFPDKPCTDAIEGEEKDSIKLVD 206
L I + Y+ +I+ A + KD LI+ +K
Sbjct: 187 YEGKNLIIAIDYSGRYDILQACKSLANKVKDGLIQVEDINEKA----------------- 229
Query: 207 LEKHMYMALG--PEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIG 255
+EK + P PD+LIRTSGE R+SNF LWQ+++ LY P LWP+ G
Sbjct: 230 MEKELLTKCSEFPNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLWPDFG 280
>AT5G58782.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr5:23738306-23739430 REVERSE
Length = 289
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 15/240 (6%)
Query: 30 IPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKYCYELGVKYVTVYAFSIDNFR 89
+P H+A IMDGNRR+AK+ L G++AG L+ C++LG+ V+ +AFS +N+
Sbjct: 57 MPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWG 116
Query: 90 RRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNLNLLTEPVRVAAQKVMKATAS 149
R EVK +M L ++ ++ IRV +GNL + E + ++ +AT S
Sbjct: 117 RHKIEVKCLMYLFQRYLKSKIQ---FFQSKEIRVSVIGNLAKIPESLLRTVHELEEATKS 173
Query: 150 NTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDKPCTDAIEGEEKDSIKLVDLEK 209
K L + + Y+ +I+ A CK+ + K + EE L + E
Sbjct: 174 YKKKHLILAIDYSGRFDILGA----CKNIV--------KKSEQGLIREEDVDETLFEREL 221
Query: 210 HMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLNFQRN 269
P PD+LIRTSGE R+SNF LWQ ++ + LWP+ + A++++QR
Sbjct: 222 QTRCTEFPSPDLLIRTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRR 281
>AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis
cis-prenyltransferase); dehydrodolichyl diphosphate
synthase | chr2:9966247-9967741 REVERSE
Length = 303
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 18/241 (7%)
Query: 30 IPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKYCYELGVKYVTVYAFSIDNFR 89
+P H+AFI+DGNRR+AK+ L GH+AG L+ I + C+ELGV V+ +AFS +N+
Sbjct: 70 MPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFSTENWG 129
Query: 90 RRPEEVKIVMDLMLEKIEGILKEESV--VNQYGIRVYFLGNLNLLTEPVRVAAQKVMKAT 147
R KI +D ++ I+ + ++ ++ +RV +GN + E + ++ +AT
Sbjct: 130 RD----KIEIDNLMSLIQHYRNKSNIKFFHRSEVRVSVIGNKTKIPESLLKEIHEIEEAT 185
Query: 148 ASNTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDKPCTDAIEGEEKDSIKLVDL 207
L + V Y+ +I+HA CK L+K K I E+ D L++
Sbjct: 186 KGYKNKHLIMAVDYSGKFDIMHA----CKS-LVK------KSEKGLIREEDVDE-ALIER 233
Query: 208 EKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLNFQ 267
E + P PD++IRTSGE R+SNF LWQ ++ L+ WP+ L+ A+ ++Q
Sbjct: 234 ELLTNCSDFPSPDLMIRTSGEQRISNFFLWQLAYSELFFSPVFWPDFDKDKLLEALASYQ 293
Query: 268 R 268
R
Sbjct: 294 R 294
>AT2G23400.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr2:9963978-9965229 REVERSE
Length = 253
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 30/238 (12%)
Query: 30 IPSHLAFIMDGNRRFAKKEKLGPGAGHKAGFSALMLILKYCYELGVKYVTVYAFSIDNFR 89
+P H++FI+DGNRR+AK++ L GH+AG ++ I + C+ELG+ V+ +AFS +N+
Sbjct: 36 MPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFSTENWG 95
Query: 90 RRPEEVKIVMDLMLEKIEGILKEESVVNQYGIRVYFLGNLNLLTEPVRVAAQKVMKATAS 149
R EVK +M L ++ ++ + +RV +GN + E + ++ +AT +
Sbjct: 96 RDKFEVKCLMSLFNHYLKSNIQ---YFQRKEVRVSVIGNKTKIPESLLKEIHEIEEATKA 152
Query: 150 NTKCLLFICVAYTSLDEIIHAVHESCKDKLIKNTIFPDKPCTDAIEGEEKDSIKLVDLEK 209
+ + S +I E + LI+ + + C+D
Sbjct: 153 TRISISSWHLVKKSEKGLIR--EEDVDEALIERELLTN--CSDF---------------- 192
Query: 210 HMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLNFQ 267
P PD++IRTSGE R+SNF LWQ ++ L+ LWP+ L+ A+ ++Q
Sbjct: 193 -------PSPDLMIRTSGEQRISNFFLWQLAYTELFYSPVLWPDFDKDKLLEALASYQ 243