Jatropha Genome Database
- JcCA0153521.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0153521.10 + phase: 0 /pseudo/partial
(171 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID INSENSI... 145 2e-35
AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1); transcript... 144 4e-35
AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor ... 141 2e-34
AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3); transcr... 139 9e-34
AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1); ... 135 8e-33
AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription f... 134 2e-32
AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21); transc... 133 6e-32
AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal transdu... 128 2e-30
AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal transdu... 128 2e-30
AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1); transcrip... 128 2e-30
AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor | chr1:... 120 4e-28
AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13); transc... 113 7e-26
AT1G55580.1 | Symbols: LAS, SCL18 | LAS (Lateral Suppressor); tr... 112 1e-25
AT2G29060.1 | Symbols: | scarecrow transcription factor family ... 111 3e-25
AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14 (SCARECROW-... 108 2e-24
AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8 ... 107 3e-24
AT5G41920.1 | Symbols: | scarecrow transcription factor family ... 105 1e-23
AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein bind... 105 1e-23
AT1G07520.1 | Symbols: | scarecrow transcription factor family ... 104 3e-23
AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11... 103 4e-23
AT3G46600.2 | Symbols: | scarecrow transcription factor family ... 99 2e-21
AT3G46600.3 | Symbols: | scarecrow transcription factor family ... 98 2e-21
AT3G46600.1 | Symbols: | scarecrow transcription factor family ... 98 2e-21
AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9 ... 97 5e-21
AT1G63100.1 | Symbols: | scarecrow transcription factor family ... 90 9e-19
AT5G66770.1 | Symbols: | scarecrow transcription factor family ... 88 3e-18
AT3G50650.1 | Symbols: | scarecrow-like transcription factor 7 ... 82 1e-16
AT4G08250.1 | Symbols: | scarecrow transcription factor family ... 75 2e-14
AT2G45160.1 | Symbols: | scarecrow transcription factor family ... 72 2e-13
AT3G49950.1 | Symbols: | scarecrow transcription factor family ... 69 2e-12
AT3G60630.1 | Symbols: | scarecrow transcription factor family ... 67 6e-12
AT4G36710.1 | Symbols: | transcription factor | chr4:17306060-1... 65 2e-11
AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROOT); protein bin... 59 2e-09
AT4G00150.1 | Symbols: | scarecrow-like transcription factor 6 ... 58 3e-09
>AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor |
chr1:5149414-5151015 FORWARD
Length = 533
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 1 ILQLHCVVKESRGALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
+ +LH ++ GA++ VL ++++ P++ +VEQ+S+HN P FL RF E+LHYYS +FD
Sbjct: 368 VFELHKLLGRP-GAIDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFD 426
Query: 61 SLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI 120
SL+ + D +++ + ++I N+V+C+G RVERHE L QWR R AGF A I
Sbjct: 427 SLEGVPSGQDKVMSEV---YLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHI 483
Query: 121 KKIA--QAKQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWKCS*N 168
A QA LA EGY V E CL+LGW ++P++A S WK S N
Sbjct: 484 GSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAWKLSTN 533
>AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1); transcription
factor | chr1:24748327-24749862 FORWARD
Length = 511
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 104/168 (61%), Gaps = 7/168 (4%)
Query: 1 ILQLHCVVKESRGALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
+ +LH ++ G+++ L + + P ++ +VEQ+++HNG FL RF E+LHYYS++FD
Sbjct: 346 VFELHRLLAHP-GSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFD 404
Query: 61 SLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI 120
SL+ P R + + F +I N+V+CEG+ RVERHE L+QWR R GF+P I
Sbjct: 405 SLEG--PPSQDR--VMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSI 460
Query: 121 KKIA--QAKQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWKCS 166
A QA LA +GY V E + CL+LGW+++P++A S W+ +
Sbjct: 461 GSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWRIN 508
>AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor |
chr1:18678177-18679625 REVERSE
Length = 482
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 13 GALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTR 72
G +S L + LSPKV+++ EQDS HNG + R +E+L+ Y+A+FD L+ +P+
Sbjct: 327 GRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQD 386
Query: 73 RAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKKIA--QAKQWL 130
R K+E+ F EEIKNI+SCEG R ERHE+L++W +R+ AGF P+ A QA++ L
Sbjct: 387 RIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLL 446
Query: 131 ANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWKC 165
+GY + EE C V+ W+ +P+ + S W+C
Sbjct: 447 QGCGF-DGYRIKEESGCAVICWQDRPLYSVSAWRC 480
>AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 523
Score = 139 bits (350), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 106/170 (62%), Gaps = 8/170 (4%)
Query: 1 ILQLHCVVKESRGALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
+ +LH V+ + G++ +L + + P +V +VEQ+++HNG FL RF EALHYYS++FD
Sbjct: 353 VFELHPVLSQP-GSIEKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFD 411
Query: 61 SLD--AMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPA 118
SL+ ++P D +++ + +I N+V+ EG R+ERHE L QWR+RM AGF P
Sbjct: 412 SLEDGVVIPSQDRVMSEV---YLGRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPV 468
Query: 119 PIKKIA--QAKQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWKCS 166
+ A QA LA + +GY V E L+L W++KP++AAS WK +
Sbjct: 469 NLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWKLA 518
>AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor |
chr2:255581-257344 REVERSE
Length = 587
Score = 135 bits (341), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 99/168 (58%), Gaps = 6/168 (3%)
Query: 1 ILQLHCVVKESRGALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
+ +LH ++ G + VL + ++ P + +VEQ+S+HNGP FL RF E+LHYYS +FD
Sbjct: 420 VFELHKLLGRP-GGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFD 478
Query: 61 SLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI 120
SL+ + D +++ + ++I N+V+CEG RVERHE L QW R +G PA +
Sbjct: 479 SLEGVPNSQDKVMSEV---YLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHL 535
Query: 121 KKIA--QAKQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWKCS 166
A QA L+ +GY V E CL+LGW ++P++ S WK S
Sbjct: 536 GSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWKLS 583
>AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 547
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 1 ILQLHCVVKESRGALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
+ +LH ++ S G++ +L + + P +V +VEQ+++HNG FL RF EALHYYS++FD
Sbjct: 382 VFELHRLLARS-GSIEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFD 440
Query: 61 SLDA--MLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPA 118
SL+ LP D +++ + +I N+V+ EG RVERHE QWR RM AGF P
Sbjct: 441 SLEDSYSLPSQDRVMSEV---YLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPI 497
Query: 119 PIKKIA--QAKQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWKCS 166
+ A QA L+ +GY V E CL++GW+++P++ S WK +
Sbjct: 498 HLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWKLA 547
>AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 413
Score = 133 bits (334), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 89/149 (59%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
+ +L+ + LSPKVV LVEQ+ + N FL RF+E L YY+A+F+S+D MLP+ R
Sbjct: 265 DRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERIN 324
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKKIAQAKQWLANAKI 135
IEQ A ++ NI++CEG R+ERHE L +W+ R S AGF+P P+ I A
Sbjct: 325 IEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDY 384
Query: 136 CEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
GY + E L LGW + +V++ WK
Sbjct: 385 SNGYAIEERDGALYLGWMDRILVSSCAWK 413
>AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor
| chr5:19522497-19524053 REVERSE
Length = 490
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 4 LHCVVKESRGALN---SVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
LH + ES N +L+ + LSPKVV LVEQ+S+ N F RFME ++YY+A+F+
Sbjct: 327 LHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFE 386
Query: 61 SLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI 120
S+D LP+ +R +EQ A ++ NI++CEG RVERHE L +WR R AGF P P+
Sbjct: 387 SIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPL 446
Query: 121 KKIAQA--KQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
+ + K L N + Y + E L LGW + +VA+ WK
Sbjct: 447 SPLVNSTIKSLLRN--YSDKYRLEERDGALYLGWMHRDLVASCAWK 490
>AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor
| chr5:19522497-19524053 REVERSE
Length = 490
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 4 LHCVVKESRGALN---SVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
LH + ES N +L+ + LSPKVV LVEQ+S+ N F RFME ++YY+A+F+
Sbjct: 327 LHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFE 386
Query: 61 SLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI 120
S+D LP+ +R +EQ A ++ NI++CEG RVERHE L +WR R AGF P P+
Sbjct: 387 SIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPL 446
Query: 121 KKIAQA--KQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
+ + K L N + Y + E L LGW + +VA+ WK
Sbjct: 447 SPLVNSTIKSLLRN--YSDKYRLEERDGALYLGWMHRDLVASCAWK 490
>AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 593
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 95/167 (56%), Gaps = 4/167 (2%)
Query: 2 LQLHCVVKESRGALNSVLQKLH---ELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAI 58
QLH + ES +N + LH L+PK+V +VEQD + N F RF+EA YYSA+
Sbjct: 427 FQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAV 486
Query: 59 FDSLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPA 118
F+SLD LP+ R +E+ A +I NIV+CEG+ R+ER+E +WR RM AGF P
Sbjct: 487 FESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPK 546
Query: 119 PIK-KIAQAKQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
P+ K+ Q L + C Y + EE L W+ K ++ AS W+
Sbjct: 547 PMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
>AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 597
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 3/166 (1%)
Query: 2 LQLHCVVKESRGALNS---VLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAI 58
L LH + ES N +L+ + LSP VV LVEQ+++ N FL RF+E +++Y A+
Sbjct: 432 LVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAV 491
Query: 59 FDSLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPA 118
F+S+D L + R +EQ A E+ N+++CEG R ERHE L +WR R AGF+P
Sbjct: 492 FESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPY 551
Query: 119 PIKKIAQAKQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
P+ A E YT+ E L LGWK++P++ + W+
Sbjct: 552 PLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCAWR 597
>AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 529
Score = 113 bits (282), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 3/168 (1%)
Query: 4 LHCVVKESRGALNSVLQKLH---ELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
LH + ES N + LH LSPK+V LVEQ+S+ N FL RF+E L YY+A+F+
Sbjct: 362 LHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFE 421
Query: 61 SLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI 120
S+DA P+ D +R EQ A +I N+++CE RVERHE L WR RM AGF P+
Sbjct: 422 SIDAARPRDDKQRISAEQHCVARDIVNMIACEESERVERHEVLGIWRVRMMMAGFTGWPV 481
Query: 121 KKIAQAKQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWKCS*N 168
A + Y + + L L WK +P+ S WK + N
Sbjct: 482 STSAAFAASEMLKAYDKNYKLGGHEGALYLFWKRRPMATCSVWKPNPN 529
>AT1G55580.1 | Symbols: LAS, SCL18 | LAS (Lateral Suppressor);
transcription factor | chr1:20764106-20765443 FORWARD
Length = 445
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 4 LHCVVKESRGALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLD 63
LH + + + L + L+ ++V + E++++H FL RF EA+ +Y AIFDSL+
Sbjct: 283 LHKIFNDDGDMIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLE 342
Query: 64 AMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKKI 123
A LP R +EQ +F +EI ++V+ E R +RH R + W M R GF PI
Sbjct: 343 ATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSF 402
Query: 124 A--QAKQWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
A QAK L EGY + + L LGW+++P+ + S WK
Sbjct: 403 ALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
>AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1336
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 88/154 (57%), Gaps = 10/154 (6%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
++VL+ + ++P V I + S N PFF+ RF EA+++YSA+FD D+ LP+ + R +
Sbjct: 1184 DAVLKLIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIR 1243
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKK------IAQAKQW 129
E+ F+ E N+++CE RVER E QW+ RM RAGF+ IK + K+W
Sbjct: 1244 FEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKW 1303
Query: 130 LANAKICEGYTVTEEKSCLVLGWKSKPIVAASCW 163
+ + + V E L+ GWK + + A+SCW
Sbjct: 1304 ----RYHKDFVVDENSKWLLQGWKGRTLYASSCW 1333
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
++VL+ + ++ P V I S+N PFF+ RF E L +YS++FD D L + D R
Sbjct: 542 DTVLKLIRKIKPDVFIPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVM 601
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKK--IAQAKQWLANA 133
E+ F+ EI N+V+CEG RVER E QW+ R RAGF+ P++K + + K + +
Sbjct: 602 FEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKELVQKLKLMVESG 661
Query: 134 KICEGYTVTEEKSCLVLGWKSKPIVAASCW 163
+ + V ++ L+ GWK + + +S W
Sbjct: 662 YKPKEFDVDQDCHWLLQGWKGRIVYGSSIW 691
>AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor |
chr1:2313828-2316137 REVERSE
Length = 769
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 88/152 (57%), Gaps = 7/152 (4%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
++VL+ + +++P V I ++N PFF+ RF EAL +YSA+FD D+ L + D R
Sbjct: 616 DAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLM 675
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKKIAQAKQWLANAKI 135
E+ F+ EI N+V+CEG RVER E QW+ R+ RAGF+ P++K L KI
Sbjct: 676 YEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKL---KI 732
Query: 136 CEGY----TVTEEKSCLVLGWKSKPIVAASCW 163
GY V + + L+ GWK + + A+S W
Sbjct: 733 ENGYDKNFDVDQNGNWLLQGWKGRIVYASSLW 764
>AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8
(SCL8) | chr5:21307196-21309118 FORWARD
Length = 640
Score = 107 bits (267), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/150 (36%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
+ +L+++ L P+VV LVEQ+ + N FLGR E+ Y A+ +S+++ +P ++ RAK
Sbjct: 493 DELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAK 552
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI-KKIAQAKQWLANAK 134
+E+ ++ N V+CEG R+ER E +WR RMS AGF+ P+ +KIA++ + N +
Sbjct: 553 VEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSRGN-R 610
Query: 135 ICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
+ G+TV E+ + GW + + AS W+
Sbjct: 611 VHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
>AT5G41920.1 | Symbols: | scarecrow transcription factor family
protein | chr5:16779982-16781199 FORWARD
Length = 405
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 7/150 (4%)
Query: 18 VLQKLHELSPKVVILVEQDSSHN-GPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKI 76
L+ L L P ++ +VEQ+ S++ G FLGRF+EALHYYSA+FD+L L + R +
Sbjct: 257 TLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTV 316
Query: 77 EQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKKIAQAKQWLANAKIC 136
EQ EI+NIV+ G R +R+ +W+ +SR GF+P ++ + L +
Sbjct: 317 EQIVLGTEIRNIVAHGGG----RRKRM-KWKEELSRVGFRPVSLRGNPATQAGLLLGMLP 371
Query: 137 -EGYTVTEEKSCLVLGWKSKPIVAASCWKC 165
GYT+ EE L LGWK ++ AS WK
Sbjct: 372 WNGYTLVEENGTLRLGWKDLSLLTASAWKS 401
>AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein binding
/ protein homodimerization/ sequence-specific DNA
binding / transcription factor | chr3:20070550-20072625
FORWARD
Length = 653
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 22 LHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKIEQFFF 81
L L+PKVV +VEQD SH G FLGRF+EA+HYYSA+FDSL A + R +EQ
Sbjct: 509 LQRLAPKVVTVVEQDLSHAG-SFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLL 567
Query: 82 AEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKKIAQAKQWLANAKI------ 135
++EI+N+++ G +R + + WR +M + GF K I+ A A +
Sbjct: 568 SKEIRNVLAVGGPSR-SGEVKFESWREKMQQCGF-----KGISLAGNAATQATLLLGMFP 621
Query: 136 CEGYTVTEEKSCLVLGWKSKPIVAASCW 163
+GYT+ ++ L LGWK ++ AS W
Sbjct: 622 SDGYTLVDDNGTLKLGWKDLSLLTASAW 649
>AT1G07520.1 | Symbols: | scarecrow transcription factor family
protein | chr1:2309718-2311805 REVERSE
Length = 695
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
+ L+ + +++P V + + S N PFF RF EAL +YSA+FD A L K + R
Sbjct: 543 DGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIH 602
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKK--IAQAKQWLANA 133
E F+ E+ N+++CEG RVER E QW+ RM RAGF+ P++ + ++ +
Sbjct: 603 FEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKW 662
Query: 134 KICEGYTVTEEKSCLVLGWKSKPIVAASCW 163
+ + + E+ + + GWK + + ++SCW
Sbjct: 663 GYHKDFVLDEDSNWFLQGWKGRILFSSSCW 692
>AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11
(SCL11) | chr5:23974808-23976640 FORWARD
Length = 610
Score = 103 bits (258), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 86/152 (56%), Gaps = 3/152 (1%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYD--TRR 73
++VL+ +++P + + E + +N PFF+ RF EAL +YS++FD D + D R
Sbjct: 447 DTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNR 506
Query: 74 AKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI-KKIAQAKQWLAN 132
+ +E+ + +++SCEG R R E QWR R+ RAGF+PA I K+I + + +
Sbjct: 507 SLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVR 566
Query: 133 AKICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
+ + + + + ++ GWK + I A SCWK
Sbjct: 567 KRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWK 598
>AT3G46600.2 | Symbols: | scarecrow transcription factor family
protein | chr3:17158379-17159799 FORWARD
Length = 453
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
++ L+ +++P + + E + ++N PFFL RF EAL + S++FD + L + D R
Sbjct: 300 DTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTL 359
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI-KKIAQAKQWLANAK 134
+E+ + ++++CEG R R E QW+ R+ RAGF+PA + K+I + + + +
Sbjct: 360 VERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKER 419
Query: 135 ICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
+ + + + + GWK + + A SCWK
Sbjct: 420 YHKDFVIDNDNHWMFQGWKGRVLYAVSCWK 449
>AT3G46600.3 | Symbols: | scarecrow transcription factor family
protein | chr3:17158052-17159799 FORWARD
Length = 551
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
++ L+ +++P + + E + ++N PFFL RF EAL + S++FD + L + D R
Sbjct: 398 DTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTL 457
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI-KKIAQAKQWLANAK 134
+E+ + ++++CEG R R E QW+ R+ RAGF+PA + K+I + + + +
Sbjct: 458 VERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKER 517
Query: 135 ICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
+ + + + + GWK + + A SCWK
Sbjct: 518 YHKDFVIDNDNHWMFQGWKGRVLYAVSCWK 547
>AT3G46600.1 | Symbols: | scarecrow transcription factor family
protein | chr3:17158048-17159799 FORWARD
Length = 583
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
++ L+ +++P + + E + ++N PFFL RF EAL + S++FD + L + D R
Sbjct: 430 DTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTL 489
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPI-KKIAQAKQWLANAK 134
+E+ + ++++CEG R R E QW+ R+ RAGF+PA + K+I + + + +
Sbjct: 490 VERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKER 549
Query: 135 ICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
+ + + + + GWK + + A SCWK
Sbjct: 550 YHKDFVIDNDNHWMFQGWKGRVLYAVSCWK 579
>AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 718
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 16 NSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAK 75
++VL + +++P + + + ++N PFF+ RF EAL ++S+IFD L+ ++P+ D R
Sbjct: 564 DTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMF 623
Query: 76 IEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIK-KIAQAKQWLANAK 134
+E F E N+++CEG RVER E QW R R+G P I + +
Sbjct: 624 LEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTF 683
Query: 135 ICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
+ + + ++ L+ GWK + ++A S WK
Sbjct: 684 YHKDFVIDQDNRWLLQGWKGRTVMALSVWK 713
>AT1G63100.1 | Symbols: | scarecrow transcription factor family
protein | chr1:23399391-23401367 REVERSE
Length = 658
Score = 89.7 bits (221), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 1 ILQLHCVVKESRGA-LNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIF 59
++Q+H + + GA + L + +P ++L EQ++ HN R +L YYSA+F
Sbjct: 476 VMQMHKTLYDGTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMF 535
Query: 60 DSLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAP 119
D++ L R K+E+ F EI+NIV+CEG R ERH WRR + + GF+
Sbjct: 536 DAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLG 595
Query: 120 I--KKIAQAKQWL-ANAKICEGYTVTEEKS-----------CLVLGWKSKPIVAASCWKC 165
+ +++ Q+K L EG+ E + L W +P+ S W
Sbjct: 596 VSEREVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAWTT 655
Query: 166 S*N 168
N
Sbjct: 656 GGN 658
>AT5G66770.1 | Symbols: | scarecrow transcription factor family
protein | chr5:26660723-26662477 FORWARD
Length = 584
Score = 87.8 bits (216), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 1 ILQLHCVVKESRGALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
+LQL+ ++ E+ +++ L+ L+P+VV L E + S N F R AL +YSA+F+
Sbjct: 417 MLQLYKLLDETPTIVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFE 476
Query: 61 SLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQA-RVERHERLDQWRRRMSRAGFQPAP 119
SL+ L + R ++E+ F I ++ E ER E +QWR M AGF+
Sbjct: 477 SLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVK 536
Query: 120 IKK--IAQAKQWLANAKICEGYTVTEEKSCLV-LGWKSKPIVAASCWK 164
+ ++QAK L N Y++ E K + L W P++ S W+
Sbjct: 537 LSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSWR 584
>AT3G50650.1 | Symbols: | scarecrow-like transcription factor 7
(SCL7) | chr3:18806472-18808100 REVERSE
Length = 542
Score = 82.4 bits (202), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 1 ILQLHCVVKESRGALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFD 60
+L+L+ ++ E+ + + L+ L+P++V L E + S N F R +L +YSA+F+
Sbjct: 371 MLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFE 430
Query: 61 SLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQ-----ARVERHERLDQWRRRMSRAGF 115
SL+ L + R ++E+ F I ++V + R E +QWR M +AGF
Sbjct: 431 SLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGF 490
Query: 116 QPAPIKK--IAQAKQWLANAKICEGYTVTE-EKSCLVLGWKSKPIVAASCWK 164
+P ++QAK L N Y++ E E + L W + P++ S W+
Sbjct: 491 EPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
>AT4G08250.1 | Symbols: | scarecrow transcription factor family
protein | chr4:5196787-5198238 FORWARD
Length = 483
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 1 ILQLHCVVKESRGALNSVLQKLHELSPKVVILVEQDSSHNG-PFFLGRFMEALHYYSAIF 59
+L L ++ ++ S L + L+PK+V LV ++ G FL RFM+ LH +SAIF
Sbjct: 313 MLHLPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIF 372
Query: 60 DSLDAMLPKYDTRRAKIEQFFFAEEIKNIVS--CEGQARVERHERLDQWRRRMSRAGFQP 117
DSL+A L + R +E+ F + N ++ A VE QW + GF+P
Sbjct: 373 DSLEAGLSIANPARGFVERVFIGPWVANWLTRITANDAEVESFASWPQW---LETNGFKP 429
Query: 118 APIKKIAQAKQWLANAKICEGYTVTE-EKSCLVLGWKSKPIVAASCW 163
+ + + L + +G+ V E ++ LVLGWKS+ +V+AS W
Sbjct: 430 LEVSFTNRCQAKLLLSLFNDGFRVEELGQNGLVLGWKSRRLVSASFW 476
>AT2G45160.1 | Symbols: | scarecrow transcription factor family
protein | chr2:18618110-18620032 REVERSE
Length = 640
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 14/159 (8%)
Query: 11 SRGALNSVLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYD 70
+ G L +L+ L +LSP +V+ ++ N F + +L Y++++ +SLDA + D
Sbjct: 492 ASGYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDANQNQDD 551
Query: 71 TRRAKIEQFFFAEEIKNIVSCEGQARVERH---ERLDQWRRRMSRAGFQPAPIKKIAQAK 127
+ IE+F+ I+ ++ ++RH ER WR ++ GF PA + ++A+A+
Sbjct: 552 S---SIERFWVQPSIEKLL-------MKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQ 601
Query: 128 -QWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWKC 165
+ L G+ V + +S LV+ W+ K +V S WKC
Sbjct: 602 AECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWKC 640
>AT3G49950.1 | Symbols: | scarecrow transcription factor family
protein | chr3:18522570-18523802 FORWARD
Length = 410
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 19 LQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKIEQ 78
L++L L+P++V L+E+D + R A +Y+ FD+ D + ++ +
Sbjct: 265 LKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM-------SEQRR 317
Query: 79 FFFAE---EIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKK--IAQAKQWLANA 133
++ AE +I+N+V+ EG RVER E +W RM A F +K+ +A K L
Sbjct: 318 WYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEH 377
Query: 134 KICEGYTVTEEKSCLVLGWKSKPIVAASCW 163
+ G ++ LVL WK +V A+ W
Sbjct: 378 AVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
>AT3G60630.1 | Symbols: | scarecrow transcription factor family
protein | chr3:22410496-22412367 REVERSE
Length = 623
Score = 67.0 bits (162), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 13 GALNSVLQKLHELSPKVVILVEQ--DSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYD 70
G L +L+ L ++SP VV+ ++ D +++ PF G + AL YY+++ +SLD+
Sbjct: 470 GYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNG-VINALQYYTSLLESLDSGNLNNA 528
Query: 71 TRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKKIAQAK-QW 129
IE+F I+ +++ R ER WR + GF P + + A+ + ++
Sbjct: 529 EAATSIERFCVQPSIQKLLT----NRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEY 584
Query: 130 LANAKICEGYTVTEEKSC---LVLGWKSKPIVAASCWKC 165
L G+ + + +S LVL W+ K +V S WKC
Sbjct: 585 LLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWKC 623
>AT4G36710.1 | Symbols: | transcription factor |
chr4:17306060-17307520 FORWARD
Length = 486
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 14 ALNSVLQKLHELSPKVVILVEQDS----SHNGPFFLGRFMEALHYYSAIFDSLDAMLPKY 69
+ + L +SPKVV+ V+ + + +G F F+ AL +Y+ + +SLDA P
Sbjct: 334 GITDFVNNLRRVSPKVVVFVDSEGWTEIAGSGSF-RREFVSALEFYTMVLESLDAAAPPG 392
Query: 70 DTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKKIA--QAK 127
D + +E F +I V A RH WR AG +P + + A QA+
Sbjct: 393 DLVKKIVEAFVLRPKISAAVET---AADRRHTGEMTWREAFCAAGMRPIQLSQFADFQAE 449
Query: 128 QWLANAKICEGYTVTEEKSCLVLGWKSKPIVAASCWK 164
L A++ G+ V + + LVL W + +VA S W+
Sbjct: 450 CLLEKAQV-RGFHVAKRQGELVLCWHGRALVATSAWR 485
>AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROOT); protein
binding / sequence-specific DNA binding / transcription
factor | chr4:17691871-17693466 FORWARD
Length = 531
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 1 ILQLHCVVK----ESRGA-LNSVLQKLHELSPKVVILVEQDSS----HNGPF---FLGRF 48
+L ++CV SRG+ ++V+ L P++V +VE+++ G F FL F
Sbjct: 352 VLAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGF 411
Query: 49 MEALHYYSAIFDSLDAMLPKYDTRRAKIEQFFFAEEIKNIVSCEGQARVERHERLDQWRR 108
E L ++ F+S + P+ R +E+ I ++V+CE ER E +W R
Sbjct: 412 GECLRWFRVCFESWEESFPRTSNERLMLERAA-GRAIVDLVACEPSDSTERRETARKWSR 470
Query: 109 RMSRAGFQPAPI-KKIAQAKQWLANAKICEG-YTVTE--EKSCLVLGWKSKPIVAASCWK 164
RM +GF ++A + L + EG +++ + + + + L W+ +P+V AS W+
Sbjct: 471 RMRNSGFGAVGYSDEVADDVRALLR-RYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWR 529
>AT4G00150.1 | Symbols: | scarecrow-like transcription factor 6
(SCL6) | chr4:57429-59105 REVERSE
Length = 558
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 18 VLQKLHELSPKVVILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKIE 77
VL+ + LSP +++ ++ F + +LH ++A+F+SLDA+ D + KIE
Sbjct: 411 VLRFVKHLSPTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQ-KIE 469
Query: 78 QFFFAEEIKNIVSCEGQARVERHERLDQWRRRMSRAGFQPAPIKKIAQAK-QWLANAKIC 136
+F EI+ +V + +ER + W+ + GF P +++ + L
Sbjct: 470 RFLIQPEIEKLV-LDRSRPIER--PMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPV 526
Query: 137 EGYTVTEEKSCLVLGWKSKPIVAASCWKC 165
G+ V ++ + L+L W+ +V S W+C
Sbjct: 527 RGFHVEKKHNSLLLCWQRTELVGVSAWRC 555