Jatropha Genome Database

JcCA0153501.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153501.20 + phase: 0 /pseudo/partial
         (196 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G27150.1 | Symbols: NHX1, ATNHX, AT-NHX1, ATNHX1 | NHX1 (NA+/...   199   1e-51
AT3G06370.1 | Symbols: NHX4, ATNHX4 | NHX4 (SODIUM HYDROGEN EXCH...   198   2e-51
AT3G05030.1 | Symbols: NHX2, ATNHX2 | NHX2 (SODIUM HYDROGEN EXCH...   193   5e-50
AT5G55470.1 | Symbols: ATNHX3, NHX3 | ATNHX3; sodium ion transme...   170   6e-43
AT1G79610.1 | Symbols: ATNHX6, NHX6 | sodium proton exchanger, p...    64   4e-11

>AT5G27150.1 | Symbols: NHX1, ATNHX, AT-NHX1, ATNHX1 | NHX1 (NA+/H+
           EXCHANGER); protein binding / sodium ion transmembrane
           transporter/ sodium:hydrogen antiporter |
           chr5:9554251-9557266 FORWARD
          Length = 538

 Score =  199 bits (506), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 105/168 (62%), Positives = 126/168 (75%)

Query: 5   LGSLVVRLGLKSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGV 64
           L SLV +L   S SD   V ++ LFV L+CACI++GHLLE+NRWMNESITAL IGL TGV
Sbjct: 2   LDSLVSKLPSLSTSDHASVVALNLFVALLCACIVLGHLLEENRWMNESITALLIGLGTGV 61

Query: 65  IILLTTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLIS 124
            ILL ++GKSSHL +F E LFFIY+LPPIIFNAGFQVKKKQFFRNF+TI+LFGAVGT+IS
Sbjct: 62  TILLISKGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFVTIMLFGAVGTIIS 121

Query: 125 FIIISVGSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
             IIS+G  + FKKL+I   D  DYL   A+    + VC+L  +   E
Sbjct: 122 CTIISLGVTQFFKKLDIGTFDLGDYLAIGAIFAATDSVCTLQVLNQDE 169


>AT3G06370.1 | Symbols: NHX4, ATNHX4 | NHX4 (SODIUM HYDROGEN
           EXCHANGER 4); sodium ion transmembrane transporter/
           sodium:hydrogen antiporter | chr3:1930899-1933515
           REVERSE
          Length = 503

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 98/156 (62%), Positives = 119/156 (76%)

Query: 17  GSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKSSH 76
            SD   V S+ LFV L+CACI++GHLLE+ RWMNESITAL IG CTG++ILL + GKSS 
Sbjct: 17  ASDHASVVSMNLFVALLCACIVLGHLLEETRWMNESITALIIGSCTGIVILLISGGKSSR 76

Query: 77  LFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLF 136
           + +F E LFFIY+LPPIIFNAGFQVKKKQFFRNFMTI+LFGA+GTLISF+IIS G+  LF
Sbjct: 77  ILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAIGTLISFVIISFGAKHLF 136

Query: 137 KKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
           +K+NI  L   DYL   A+    + VC+L  +   E
Sbjct: 137 EKMNIGDLTIADYLAIGAIFSATDSVCTLQVLNQDE 172


>AT3G05030.1 | Symbols: NHX2, ATNHX2 | NHX2 (SODIUM HYDROGEN
           EXCHANGER 2); sodium ion transmembrane transporter/
           sodium:hydrogen antiporter | chr3:1393456-1396784
           REVERSE
          Length = 546

 Score =  193 bits (491), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 99/167 (59%), Positives = 125/167 (74%)

Query: 6   GSLVVRLGLKSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVI 65
            SL  ++   S SD   V S+ LFV L+CACI+IGHLLE+NRWMNESITAL IGL TGV+
Sbjct: 5   ASLTSKMLSVSTSDHASVVSLNLFVALLCACIVIGHLLEENRWMNESITALLIGLGTGVV 64

Query: 66  ILLTTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISF 125
           ILL ++GK+SHL +F E LFFIY+LPPIIFNAGFQVKKKQFFRNF+TI+ FGA+GT++S 
Sbjct: 65  ILLISRGKNSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFVTIMAFGAIGTVVSC 124

Query: 126 IIISVGSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
            IIS+G+ + FKKL+I   D  D+L   A+    + VC+L  +   E
Sbjct: 125 TIISLGAIQFFKKLDIGTFDLGDFLAIGAIFAATDSVCTLQVLNQDE 171


>AT5G55470.1 | Symbols: ATNHX3, NHX3 | ATNHX3; sodium ion
           transmembrane transporter/ sodium:hydrogen antiporter |
           chr5:22469553-22472585 REVERSE
          Length = 529

 Score =  170 bits (430), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 85/168 (50%), Positives = 116/168 (69%), Gaps = 6/168 (3%)

Query: 15  KSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKS 74
           K  ++   V  I++F+ ++C C++IGHLLE+NRW+NESITA+ +G  +G +ILL ++GKS
Sbjct: 12  KLAAEHPQVIPISVFIAILCLCLVIGHLLEENRWVNESITAILVGAASGTVILLISKGKS 71

Query: 75  SHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAK 134
           SH+ +FDE LFFIY+LPPIIFNAGFQVKKK+FF NF+TI+ FG +G  IS +IIS G+  
Sbjct: 72  SHILVFDEELFFIYLLPPIIFNAGFQVKKKKFFHNFLTIMSFGVIGVFISTVIISFGTWW 131

Query: 135 LFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTREILHLDAAIVL 182
           LF KL    L   DYL    +    + VC+L      +ILH D   +L
Sbjct: 132 LFPKLGFKGLSARDYLAIGTIFSSTDTVCTL------QILHQDETPLL 173


>AT1G79610.1 | Symbols: ATNHX6, NHX6 | sodium proton exchanger,
           putative (NHX6) | chr1:29953089-29957070 REVERSE
          Length = 535

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 3/105 (2%)

Query: 26  ITLFVTLICACIIIGHLLEKNR--WMNESITALAIGLCTGVIILLT-TQGKSSHLFLFDE 82
           I L + ++    ++GH+L +++  ++ E+  +L IGL  G +  ++ T+      F F +
Sbjct: 28  ILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGGLANISNTETSIRTWFNFHD 87

Query: 83  HLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFII 127
             FF+++LPPIIF +GF ++ K FF NF  IV F  +GT ++ ++
Sbjct: 88  EFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFSVLGTFVASMV 132