Jatropha Genome Database
- JcCA0153071.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0153071.10 - phase: 0 /partial
(373 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 1e-61
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 2e-59
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 2e-57
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 3e-56
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 5e-56
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 8e-54
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 3e-52
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 5e-52
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 6e-52
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 1e-51
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 7e-51
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 2e-50
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 4e-50
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 192 2e-49
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 3e-48
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 1e-47
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 184 1e-46
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 1e-45
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 2e-45
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 3e-45
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 9e-45
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 3e-44
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 175 4e-44
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 6e-44
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 173 2e-43
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 173 2e-43
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 172 3e-43
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 8e-43
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 167 9e-42
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 167 1e-41
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 2e-41
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 2e-41
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 3e-41
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 165 5e-41
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 5e-41
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 6e-41
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 7e-41
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 8e-41
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 1e-40
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 163 2e-40
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 2e-40
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 4e-40
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 161 6e-40
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 7e-40
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 160 1e-39
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 1e-39
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 4e-39
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 6e-39
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 6e-39
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 2e-38
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 2e-38
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 4e-38
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 7e-38
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 1e-37
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 1e-37
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 2e-37
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 3e-37
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 4e-37
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 5e-37
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 1e-36
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 1e-36
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 1e-36
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 2e-36
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 2e-36
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 149 2e-36
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 3e-36
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 7e-36
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 9e-36
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 9e-36
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 147 1e-35
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 3e-35
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 145 4e-35
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 5e-35
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 7e-35
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 7e-35
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 144 1e-34
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 1e-34
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 1e-34
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 143 2e-34
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 3e-34
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 3e-34
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 142 5e-34
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 5e-34
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 9e-34
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 1e-33
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 1e-33
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 1e-33
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 140 2e-33
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 2e-33
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 3e-33
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 3e-33
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 139 4e-33
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 5e-33
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 5e-33
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 6e-33
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 6e-33
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 7e-33
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 1e-32
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 1e-32
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 2e-32
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 2e-32
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 3e-32
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 4e-32
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 135 5e-32
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 5e-32
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 5e-32
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 6e-32
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 134 1e-31
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 1e-31
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 3e-31
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 3e-31
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 4e-31
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 4e-31
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 9e-31
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 130 1e-30
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 1e-30
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 1e-30
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 130 2e-30
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 129 3e-30
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 4e-30
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 6e-30
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 7e-30
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 3e-29
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 3e-29
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 3e-29
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 4e-29
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 4e-29
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 6e-29
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 2e-28
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 2e-28
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 123 2e-28
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 3e-28
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 3e-28
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 4e-28
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 5e-28
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 6e-28
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 6e-28
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 7e-28
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 7e-28
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 120 1e-27
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 1e-27
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 120 2e-27
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 3e-27
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 5e-27
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 118 6e-27
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 7e-27
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 9e-27
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 2e-26
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 115 3e-26
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 8e-26
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 9e-26
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 3e-25
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 4e-25
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 112 4e-25
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 7e-25
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 8e-25
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 8e-25
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 2e-24
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 4e-24
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 2e-23
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 9e-23
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 103 1e-22
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 7e-22
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 8e-22
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 1e-21
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 4e-21
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 97 2e-20
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 96 4e-20
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 4e-20
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 4e-20
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 92 4e-19
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 7e-19
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 90 3e-18
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 90 3e-18
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 87 1e-17
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 87 2e-17
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 86 5e-17
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 86 6e-17
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 6e-17
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 7e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 80 2e-15
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 79 4e-15
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 4e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 4e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 77 2e-14
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 6e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 75 7e-14
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 72 5e-13
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 72 6e-13
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 72 8e-13
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 9e-13
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 71 1e-12
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 70 2e-12
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 70 2e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 2e-12
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 9e-12
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 9e-12
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 9e-12
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 9e-12
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 3e-11
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 65 5e-11
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 64 1e-10
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 64 2e-10
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 64 2e-10
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 63 3e-10
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 63 3e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 62 5e-10
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 59 4e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 59 5e-09
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 7e-09
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 59 7e-09
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 58 9e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 55 7e-08
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 54 1e-07
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 53 4e-07
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 6e-07
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 52 7e-07
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 9e-07
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 50 3e-06
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 7e-06
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 48 9e-06
AT1G60770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-05
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 200/350 (57%), Gaps = 15/350 (4%)
Query: 25 NTITTSRILQQHLFH---LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIAS-- 79
N I+ S L+ +L+ LQ C + L QIH +++ G Q SY + K LSF I+S
Sbjct: 2 NVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTS 61
Query: 80 -GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFL 138
L A VF P LWN MIRG + S+ P +S++L+ +M + A N T+ L
Sbjct: 62 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL 121
Query: 139 LSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGE 198
L C+ E Q+H ++ GY +V+ +LIN Y + G + A +FD + E
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTG---NFKLAHLLFDRIPE 178
Query: 199 RNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM 258
+ V WNS++ Y++ G ++ A +F KM E+N ++WTTMI+GY + ++AL LF++M
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM 238
Query: 259 RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS-LNNALIHMYA 317
+ + V+ D VSL ALSACA+LG L G+WIH+Y+ K++ + S L LI MYA
Sbjct: 239 QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL-----NKTRIRMDSVLGCVLIDMYA 293
Query: 318 SCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
CG +EEA EVF+ + K+S +WT +I +A G+ EA++ F MQ +G
Sbjct: 294 KCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 343
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 161/341 (47%), Gaps = 26/341 (7%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILA 70
YQ +L P N T LL++C L +QIH QI G+ Y +
Sbjct: 103 YQRMLCSSAPHNAYT--------FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVN 154
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
L++ Y +G+ AH +F + P WN +I+G+ ++ ++ LF +M AE
Sbjct: 155 SLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM----AEK 210
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
N ++++ ++SG ++ + +E Q+ + + P+ N ++ GA +E +
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA---LEQGK 267
Query: 191 RVFDEMGERNI----VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNG 246
+ + + I V ++ +Y +CG +E A +F + +++V WT +I+GYA +G
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
R+A+ F +M++ + + ++ A L+AC+ G + G+ I +E + K I
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPT---I 384
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICA 346
++ + G+++EA + MP + N + W ++ A
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L + L +C L L Q IH+ + S + L+ Y G + A +VFK +K
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
SV W +I G+A R+++ F +M+ +PN++T++ +L+ C+ +GL+ EG+
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 154 VHGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVY 211
+ + + P + +++L G AG ++ A+R EM + N V W ++L
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGL---LDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 212 MRCGNVEGARRI 223
N+E I
Sbjct: 427 RIHKNIELGEEI 438
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 40/241 (16%)
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINL-YGMAGADFGVE 187
E NL L C++ L+ Q+H R+L G + + T ++ +DF +
Sbjct: 11 EHNLYETMSCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDF-LP 66
Query: 188 YAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
YAQ VFD FD+ + W MI G++ + +
Sbjct: 67 YAQIVFDG----------------------------FDR---PDTFLWNLMIRGFSCSDE 95
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
++L+L+ +M + + + + L AC+ L IH I KL ++ +
Sbjct: 96 PERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT-KLGYENDVYAV- 153
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
N+LI+ YA G + A+ +F +P+ ++SW ++I + K G + AL +F M
Sbjct: 154 --NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN 211
Query: 368 A 368
A
Sbjct: 212 A 212
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 203/351 (57%), Gaps = 11/351 (3%)
Query: 21 LIPANTITTSRILQQHL-FHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIAS 79
+P+++ ++ H LL +CKTL+ L IH Q++ G +Y L+KL+ F I S
Sbjct: 19 FLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILS 78
Query: 80 GH---LLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
H L A VFK ++ P++ +WN M RGHA S P ++ L+ M + PN T+
Sbjct: 79 PHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFP 138
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
F+L CA+S +EG+Q+HG VL G ++++ T+LI++Y G +E A +VFD+
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR---LEDAHKVFDKS 195
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
R++V + +++ Y G +E A+++FD++ ++VV+W MI+GYA G ++AL LF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMY 316
M + +V D+ ++V +SACA+ G + LGR +H +I++ G + ++ NALI +Y
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV----NALIDLY 311
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ CG +E A +F +P + ISW T+I + EAL +F+ M G
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 184/335 (54%), Gaps = 16/335 (4%)
Query: 40 LLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L+SC K K QIH ++ G Y+ L+S Y+ +G L AHKVF + +
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V + +I+G+A + LF+++ + +++++ ++SG A +G +E ++
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKD----VVSWNAMISGYAETGNYKEALELFK 255
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV---FDEMG-ERNIVCWNSMLAVYM 212
++ P+ +++ +G+ +E ++V D+ G N+ N+++ +Y
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGS---IELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
+CG +E A +F+++ ++V++W T+I GY ++AL+LF +M R+ + V++++
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
L ACA LG + +GRWIH YI+++L G + + SL +LI MYA CG IE A++VF +
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNA--SSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 333 PKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+S SW MI FA G A+ + +F M+ +G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 32/238 (13%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H I HGF I+ L+ Y G L +A +F+ + V WN +I G+
Sbjct: 287 QVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMN 346
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+++++LF +M + PN +T +L CA G + G +H V++
Sbjct: 347 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH-----------VYIDK 395
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
L GV A + S++ +Y +CG++E A ++F+ ++ ++
Sbjct: 396 RLK----------GVTNASSL-----------RTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI 289
+ +W MI G+A +G+ + LF++MR+ + D ++ V LSAC+ G L LGR I
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 59 IHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVI 118
+ G + S + L+ Y G + +AH+VF + + S++ WN MI G A S
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 119 LFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY--YPNVFMKTNLINL 176
LF++MR +P+ +T+ LLS C+ SG+L G + R + Y P + +I+L
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF-RTMTQDYKMTPKLEHYGCMIDL 515
Query: 177 YGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVE 218
G +G F EM ++ W S+L GNVE
Sbjct: 516 LGHSGL-FKEAEEMINMMEMEPDGVI-WCSLLKACKMHGNVE 555
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 203/354 (57%), Gaps = 22/354 (6%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASG----HLLSAHKVFKEV 92
LF + +C+T++ LSQIH + G + + A++L F S L AHK+F ++
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 93 KNPSVTLWNQMIRGHARSESPRK--SVILFNQMRAAE-AEPNLLTYSFLLSGCARSGLLR 149
+ WN +IRG + S+ + ++ LF +M + E EPN T+ +L CA++G ++
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAG--ADFGVEYAQRVFDE----MGER---- 199
EG+Q+HG L G+ + F+ +NL+ +Y M G D V + + + ++ M +R
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 200 -NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM 258
IV WN M+ YMR G+ + AR +FDKM +R+VV+W TMI+GY+ NG + A+ +F +M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 259 RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYAS 318
++ + + V+LV+ L A + LG L LG W+H Y E+ SG + L +ALI MY+
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAED--SGIRIDDV--LGSALIDMYSK 321
Query: 319 CGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
CG+IE+A VF +P+ + I+W+ MI FA G A +A+ F M+ G +
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 167/354 (47%), Gaps = 28/354 (7%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
Y+M+ +E + N T +L+ ++ QIH + +GF ++++ L+
Sbjct: 116 YEMMSDEFVEPNRFTFPSVLKA-----CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLV 170
Query: 74 SFYIASGHLLSAHKVF--------------KEVKNPSVTLWNQMIRGHARSESPRKSVIL 119
Y+ G + A +F + ++ + LWN MI G+ R + + +L
Sbjct: 171 RMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARML 230
Query: 120 FNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGM 179
F++MR + ++++++ ++SG + +G ++ +V + PN +++
Sbjct: 231 FDKMR----QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISR 286
Query: 180 AGADFGVEYAQRVFDEMGER-NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTM 238
G+ E+ ++ G R + V ++++ +Y +CG +E A +F+++ NV+TW+ M
Sbjct: 287 LGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAM 346
Query: 239 IAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLS 298
I G+A +G+ A+ F KMR+A V V+ + L+AC+ G + GR Y + +S
Sbjct: 347 INGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR---RYFSQMVS 403
Query: 299 GKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMICAFAKQG 351
I ++ + G+++EA E MP K ++ W ++ A QG
Sbjct: 404 VDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
+ L+ Y G + A VF+ + +V W+ MI G A ++ F +MR A
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGR-VLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
P+ + Y LL+ C+ GL+ EG + + V V+G P + +++L G +G E
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSG--LLDEA 430
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
+ + + + + V W ++L GNVE +R+ + +M+
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMD 471
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 196/373 (52%), Gaps = 38/373 (10%)
Query: 28 TTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIAS----GHLL 83
T R + L Q+CK ++ L QIH +V++G ++ +L+ Y AS G L
Sbjct: 6 TNDRTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALK 63
Query: 84 SAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA 143
AHK+F E+ P V++ N ++RG A+S P K+V L+ +M P+ T++F+L C+
Sbjct: 64 YAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACS 123
Query: 144 RSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG------------------ 185
+ G HG+V+ +G+ N ++K LI + G D G
Sbjct: 124 KLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCG-DLGIASELFDDSAKAHKVAWS 182
Query: 186 -----------VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVT 234
++ A R+FDEM ++ V WN M+ ++C ++ AR +FD+ E++VVT
Sbjct: 183 SMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT 242
Query: 235 WTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIE 294
W MI+GY G ++AL +F +MR A D V++++ LSACA LGDL G+ +H YI
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYIL 302
Query: 295 EKLSGKSQSLL-ISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYA 353
E S S + + NALI MYA CG I+ A EVFR + R +W T+I A +A
Sbjct: 303 ETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HA 361
Query: 354 NEALAIFELMQSL 366
++ +FE MQ L
Sbjct: 362 EGSIEMFEEMQRL 374
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 84 SAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA 143
SA ++F V WN MI G+ P++++ +F +MR A P+++T LLS CA
Sbjct: 227 SARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA 286
Query: 144 RSGLLREGEQVHGRVL-VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIV 202
G L G+++H +L ++++ T +
Sbjct: 287 VLGDLETGKRLHIYILETASVSSSIYVGTPI----------------------------- 317
Query: 203 CWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAH 262
WN+++ +Y +CG+++ A +F + +R++ TW T+I G A + ++ +F +M+R
Sbjct: 318 -WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLK 375
Query: 263 VDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVI 322
V ++V+ + + AC+ G + GR + + + + + I ++ M G +
Sbjct: 376 VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPN---IKHYGCMVDMLGRAGQL 432
Query: 323 EEAYEVFRWMPKRSN-ISWTTMICAFAKQG------YANEAL 357
EEA+ M N I W T++ A G YANE L
Sbjct: 433 EEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKL 474
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L+ Y G + A +VF+ VK+ ++ WN +I G A + S+ +F +M+ + PN
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHA-EGSIEMFEEMQRLKVWPN 379
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY---PNVFMKTNLINLYGMAGADFGVEY 188
+T+ ++ C+ SG + EG + L+ Y PN+ ++++ G AG +E
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFS--LMRDMYNIEPNIKHYGCMVDMLGRAGQ---LEE 434
Query: 189 AQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
A + M E N + W ++L GNVE + +K++
Sbjct: 435 AFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLL 475
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 194/335 (57%), Gaps = 8/335 (2%)
Query: 31 RILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
R ++ + LQ K+ +I+ I+IHG SQ S+++ K++ F + A ++F
Sbjct: 7 REVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFN 66
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLR 149
+V NP+V L+N +IR + + + ++ Q+ R + P+ T+ F+ CA G
Sbjct: 67 QVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA 209
G+QVHG + G +V + LI++Y M D V+ A +VFDEM ER+++ WNS+L+
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMY-MKFDDL-VD-AHKVFDEMYERDVISWNSLLS 183
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
Y R G ++ A+ +F M+++ +V+WT MI+GY G +A+ F +M+ A ++ D++S
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
L++ L +CA+LG L LG+WIH Y E + K + NALI MY+ CGVI +A ++F
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC----NALIEMYSKCGVISQAIQLF 299
Query: 330 RWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
M + ISW+TMI +A G A+ A+ F MQ
Sbjct: 300 GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQ 334
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 160/332 (48%), Gaps = 22/332 (6%)
Query: 40 LLQSCKTLK--YLS-QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+ +SC +L YL Q+H + G L+ Y+ L+ AHKVF E+
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V WN ++ G+AR +K+ LF+ M + +++++ ++SG G E
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFR 230
Query: 157 RVLVNGYYPN-VFMKTNLINLYGMAGADFGVE---YAQR--VFDEMGERNIVCWNSMLAV 210
+ + G P+ + + + L + + + G YA+R + G VC N+++ +
Sbjct: 231 EMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTG----VC-NALIEM 285
Query: 211 YMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSL 270
Y +CG + A ++F +M ++V++W+TMI+GYA +G A+ FN+M+RA V + ++
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITF 345
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
+ LSAC+ +G + G + + + + I LI + A G +E A E+ +
Sbjct: 346 LGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK---IEHYGCLIDVLARAGKLERAVEITK 402
Query: 331 WMPKRSNIS-WTTMICAFAKQGYANEALAIFE 361
MP + + W +++ + G + AL +
Sbjct: 403 TMPMKPDSKIWGSLLSSCRTPGNLDVALVAMD 434
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 194/372 (52%), Gaps = 44/372 (11%)
Query: 32 ILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIA---SGHLLSAHKV 88
I H LL SCK L+ L+QIH + +G SY KL+ + A S L A ++
Sbjct: 3 IAIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRL 61
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGL 147
P ++N ++RG++ S+ P SV +F +M R P+ +++F++
Sbjct: 62 LLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRS 121
Query: 148 LREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS- 206
LR G Q+H + L +G ++F+ T LI +YG G VE+A++VFDEM + N+V WN+
Sbjct: 122 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGC---VEFARKVFDEMHQPNLVAWNAV 178
Query: 207 ------------------------------MLAVYMRCGNVEGARRIFDKMMERNVVTWT 236
MLA Y++ G +E A+RIF +M R+ V+W+
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 238
Query: 237 TMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEK 296
TMI G A NG ++ + F +++RA + ++VSL LSAC++ G G+ +H ++E+
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK- 297
Query: 297 LSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM-PKRSNISWTTMICAFAKQGYANE 355
S ++S+NNALI MY+ CG + A VF M KR +SWT+MI A G E
Sbjct: 298 ---AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEE 354
Query: 356 ALAIFELMQSLG 367
A+ +F M + G
Sbjct: 355 AVRLFNEMTAYG 366
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 140/302 (46%), Gaps = 39/302 (12%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
+L+ YI +G L SA ++F E+ + W+ MI G A + S +S + F +++ A PN
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
++ + +LS C++SG G+ +HG V GY V + LI++Y
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYS------------- 315
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME-RNVVTWTTMIAGYARNGKCRQ 250
RCGNV AR +F+ M E R +V+WT+MIAG A +G+ +
Sbjct: 316 ---------------------RCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEE 354
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
A+ LFN+M V D +S ++ L AC+ G + G Y E I
Sbjct: 355 AVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE---DYFSEMKRVYHIEPEIEHYG 411
Query: 311 ALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
++ +Y G +++AY+ MP + I W T++ A + G A + + + L N
Sbjct: 412 CMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPN 471
Query: 370 EA 371
+
Sbjct: 472 NS 473
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 188/349 (53%), Gaps = 10/349 (2%)
Query: 22 IPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGH 81
+PA + S +L + C T++ L QIH ++ G + +++L+F AS
Sbjct: 13 VPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS 72
Query: 82 LLS-AHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM--RAAEAEPNLLTYSFL 138
++ A+ VF + + + +WN +IRG +RS P ++ +F M + +P LTY +
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 139 LSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGE 198
R G R+G Q+HG V+ G + F++ ++++Y G + A R+F M
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGC---LIEAWRIFLGMIG 189
Query: 199 RNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM 258
++V WNSM+ + +CG ++ A+ +FD+M +RN V+W +MI+G+ RNG+ + AL +F +M
Sbjct: 190 FDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM 249
Query: 259 RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYAS 318
+ V D ++V+ L+ACA LG GRWIH YI + S++++ ALI MY
Sbjct: 250 QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRN-RFELNSIVVT---ALIDMYCK 305
Query: 319 CGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
CG IEE VF PK+ W +MI A G+ A+ +F ++ G
Sbjct: 306 CGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSG 354
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 166/358 (46%), Gaps = 9/358 (2%)
Query: 16 MLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSF 75
+ ++ L + ++ R+ +F + Q+H ++ G S+I +L
Sbjct: 111 IFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHM 170
Query: 76 YIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
Y+ G L+ A ++F + V WN MI G A+ ++ LF++M + N +++
Sbjct: 171 YVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEM----PQRNGVSW 226
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA-DFGVEYAQRVFD 194
+ ++SG R+G ++ + + P+ F +L+N GA + G + +
Sbjct: 227 NSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVR 286
Query: 195 EMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALIL 254
E N + +++ +Y +CG +E +F+ ++ + W +MI G A NG +A+ L
Sbjct: 287 NRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDL 346
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
F+++ R+ ++ D VS + L+ACA G++ ++EK + I +++
Sbjct: 347 FSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS---IKHYTLMVN 403
Query: 315 MYASCGVIEEAYEVFRWMP-KRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEA 371
+ G++EEA + + MP + + W++++ A K G A + ++ L +E
Sbjct: 404 VLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 182/313 (58%), Gaps = 14/313 (4%)
Query: 59 IHGFSQKS------YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+HG + KS ++ L+ Y + G L SA KVF +K V WN MI G + S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
P K++ LF +M + + + + +T +LS CA+ L G QV + N N+ +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
++++Y G+ +E A+R+FD M E++ V W +ML Y + E AR + + M ++++
Sbjct: 273 MLDMYTKCGS---IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMR-RAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
V W +I+ Y +NGK +ALI+F++++ + ++ L+Q++LV+ LSACA++G L LGRWIH+
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
YI K G + ++ +ALIHMY+ CG +E++ EVF + KR W+ MI A G
Sbjct: 390 YI--KKHGIRMNFHVT--SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 352 YANEALAIFELMQ 364
NEA+ +F MQ
Sbjct: 446 CGNEAVDMFYKMQ 458
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 42/327 (12%)
Query: 25 NTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIAS--GHL 82
N TT+ +H+ L++ C +L+ L Q H ++ G Y +KL + S L
Sbjct: 22 NQPTTNNERSRHI-SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASL 80
Query: 83 LSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILF-NQMRAAEAEPNLLTYSFLLSG 141
A KVF E+ P+ WN +IR +A P S+ F + + ++ PN T+ FL+
Sbjct: 81 EYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 142 CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI 201
A L G+ +HG + + +VF+ +LI+ Y G ++ A +VF + E+++
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG---DLDSACKVFTTIKEKDV 197
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA 261
V WNSM+ +++ G+ + +AL LF KM
Sbjct: 198 VSWNSMINGFVQKGSPD-------------------------------KALELFKKMESE 226
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV 321
V V++V LSACA++ +L GR + +YIEE ++ ++L NA++ MY CG
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE----NRVNVNLTLANAMLDMYTKCGS 282
Query: 322 IEEAYEVFRWMPKRSNISWTTMICAFA 348
IE+A +F M ++ N++WTTM+ +A
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR-AAEAEP 130
+L Y S +A +V + + WN +I + ++ P +++I+F++++ +
Sbjct: 304 MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL 363
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
N +T LS CA+ G L G +H + +G N + + LI++Y
Sbjct: 364 NQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYS------------ 411
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+CG++E +R +F+ + +R+V W+ MI G A +G +
Sbjct: 412 ----------------------KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELG 281
A+ +F KM+ A+V + V+ AC+ G
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTG 480
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 5/152 (3%)
Query: 215 GNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM-RRAHVDLDQVSLVAA 273
++E AR++FD++ + N W T+I YA ++ F M + ++ +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
+ A AE+ L LG+ +H + G + + N+LIH Y SCG ++ A +VF +
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSD----VFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQS 365
++ +SW +MI F ++G ++AL +F+ M+S
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMES 225
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH+ I HG ++ + L+ Y G L + +VF V+ V +W+ MI G A
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 446
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMKT 171
++V +F +M+ A +PN +T++ + C+ +GL+ E E + ++ N G P
Sbjct: 447 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA 506
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMME- 229
++++ G +G +E A + + M + W ++L N+ A +++E
Sbjct: 507 CIVDVLGRSGY---LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 563
Query: 230 --RNVVTWTTMIAGYARNGKCRQALILFNKMR 259
RN + YA+ GK L MR
Sbjct: 564 EPRNDGAHVLLSNIYAKLGKWENVSELRKHMR 595
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 200/348 (57%), Gaps = 12/348 (3%)
Query: 25 NTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLS 84
N ++ S L + L LK L Q H ++I G ++ + +AK + +GHL
Sbjct: 6 NALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRY 65
Query: 85 AHKVFKEVKNPSVTLWNQMIRGHARSESPRK---SVILFNQMRAAEAEPNLLTYSFLLSG 141
A+ VF P+ L N MIR + + P ++ ++ ++ A A+P+ T+ F+L
Sbjct: 66 AYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKI 125
Query: 142 CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI 201
R + G Q+HG+V+V G+ +V + T LI +Y G G+ A+++FDEM +++
Sbjct: 126 AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCG---GLGDARKMFDEMLVKDV 182
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKM--MERNVVTWTTMIAGYARNGKCRQALILFNKMR 259
WN++LA Y + G ++ AR + + M RN V+WT +I+GYA++G+ +A+ +F +M
Sbjct: 183 NVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRML 242
Query: 260 RAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASC 319
+V+ D+V+L+A LSACA+LG L LG I +Y++ + ++ +SLNNA+I MYA
Sbjct: 243 MENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRA----VSLNNAVIDMYAKS 298
Query: 320 GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
G I +A +VF + +R+ ++WTT+I A G+ EALA+F M G
Sbjct: 299 GNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 158/301 (52%), Gaps = 15/301 (4%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH Q+V+ GF +++ L+ Y + G L A K+F E+ V +WN ++ G+ +
Sbjct: 137 QIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVG 196
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++ L M N ++++ ++SG A+SG E +V R+L+ P+
Sbjct: 197 EMDEARSLLEMMPCWVR--NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLL 254
Query: 172 NLINLYGMAGADFG-VEYAQRV---FDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
+++ A AD G +E +R+ D G R + N+++ +Y + GN+ A +F+
Sbjct: 255 AVLS----ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFEC 310
Query: 227 MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
+ ERNVVTWTT+IAG A +G +AL +FN+M +A V + V+ +A LSAC+ +G + LG
Sbjct: 311 VNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLG 370
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMIC 345
+ + + K I +I + G + EA EV + MP ++N + W +++
Sbjct: 371 KRLFNSMRSKYGIHPN---IEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
Query: 346 A 346
A
Sbjct: 428 A 428
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 179/323 (55%), Gaps = 8/323 (2%)
Query: 39 HLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVT 98
+ L++C L QIHT+I+ H + ++ +L+S + G A VF ++++PS
Sbjct: 25 YFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTF 84
Query: 99 LWNQMIRGHARSESPRKSVILFNQMRAA-EAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
WN MIR + + PR++++LF M + +++ + T+ F++ C S +R G QVHG
Sbjct: 85 TWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGL 144
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
+ G++ +VF + L++LY G + ++VFD+M R+IV W +ML + +
Sbjct: 145 AIKAGFFNDVFFQNTLMDLYFKCGKP---DSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
+ A +F++M RNVV+WT MI Y +N + +A LF +M+ V ++ ++V L A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
+LG L +GRW+H Y + L L ALI MY+ CG +++A +VF M +S
Sbjct: 262 TQLGSLSMGRWVHDYAHK----NGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 338 ISWTTMICAFAKQGYANEALAIF 360
+W +MI + G EAL++F
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLF 340
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 125/256 (48%), Gaps = 17/256 (6%)
Query: 40 LLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
++++C +++ +Q+H + GF + L+ Y G S KVF ++ S
Sbjct: 125 VIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRS 184
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ W M+ G + + I+FNQM N+++++ +++ ++ E Q+
Sbjct: 185 IVSWTTMLYGLVSNSQLDSAEIVFNQMPMR----NVVSWTAMITAYVKNRRPDEAFQLFR 240
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERN---IVCW--NSMLAVY 211
R+ V+ PN F NL+ A G R + +N + C+ +++ +Y
Sbjct: 241 RMQVDDVKPNEFTIVNLLQ----ASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRR-AHVDLDQVSL 270
+CG+++ AR++FD M +++ TW +MI +G +AL LF +M A V+ D ++
Sbjct: 297 SKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITF 356
Query: 271 VAALSACAELGDLRLG 286
V LSACA G+++ G
Sbjct: 357 VGVLSACANTGNVKDG 372
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 77 IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
+++ L SA VF ++ +V W MI + ++ P ++ LF +M+ + +PN T
Sbjct: 196 VSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIV 255
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
LL + G L G VH NG+ + F+ T LI++Y G+ ++ A++VFD M
Sbjct: 256 NLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGS---LQDARKVFDVM 312
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKM-----MERNVVTWTTMIAGYARNGKCRQA 251
+++ WNSM+ G E A +F++M +E + +T+ +++ A G +
Sbjct: 313 QGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Query: 252 LILFNKM 258
L F +M
Sbjct: 373 LRYFTRM 379
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
+ +LLQ+ L LS +H +GF ++ L+ Y G L A KVF ++
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRA-AEAEPNLLTYSFLLSGCARSGLLREGE 152
S+ WN MI +++ LF +M A EP+ +T+ +LS CA +G +++G
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGL 373
Query: 153 QVHGRVL-VNGYYP 165
+ R++ V G P
Sbjct: 374 RYFTRMIQVYGISP 387
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 186/345 (53%), Gaps = 14/345 (4%)
Query: 32 ILQQHLF-HLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHK 87
+L ++ F +L +C L ++ Q+H+ I F YI + L+ Y G++ A +
Sbjct: 149 VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQR 208
Query: 88 VFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGL 147
VF E+ + +V WN +I ++ +++ +F M + EP+ +T + ++S CA
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 148 LREGEQVHGRVLVNGYYPNVFMKTN-LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS 206
++ G++VHGRV+ N N + +N +++Y ++ A+ +FD M RN++ S
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR---IKEARFIFDSMPIRNVIAETS 325
Query: 207 MLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
M++ Y + + AR +F KM ERNVV+W +IAGY +NG+ +AL LF ++R V
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEK----LSGKSQSLLISLNNALIHMYASCGVI 322
S L ACA+L +L LG H ++ + SG+ + + N+LI MY CG +
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV--GNSLIDMYVKCGCV 443
Query: 323 EEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
EE Y VFR M +R +SW MI FA+ GY NEAL +F M G
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESG 488
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 133/234 (56%), Gaps = 16/234 (6%)
Query: 135 YSFLLSGCARSGL----LREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
++ LL C +S L +R VH V+ +G+ +F++ LI+ Y G+ +E +
Sbjct: 22 FAKLLDSCIKSKLSAIYVR---YVHASVIKSGFSNEIFIQNRLIDAYSKCGS---LEDGR 75
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+VFD+M +RNI WNS++ + G ++ A +F M ER+ TW +M++G+A++ +C +
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL-ISLN 309
AL F M + L++ S + LSAC+ L D+ G +H+ I KS L + +
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI-----AKSPFLSDVYIG 190
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+AL+ MY+ CG + +A VF M R+ +SW ++I F + G A EAL +F++M
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 165/361 (45%), Gaps = 76/361 (21%)
Query: 40 LLQSCKTLK----YLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
LL SC K Y+ +H ++ GFS + +I +L+ Y G L +VF ++
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 96 SVTLWNQMIRGHAR------SES-----PRKSVILFNQMRAAEAEPN------------- 131
++ WN ++ G + ++S P + +N M + A+ +
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 132 -----LLTYSF--LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADF 184
L YSF +LS C+ + +G QVH + + + +V++ + L+++Y G
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG--- 201
Query: 185 GVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYAR 244
V AQRVFDEMG+RN+V WNS+ I + +
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSL-------------------------------ITCFEQ 230
Query: 245 NGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYI--EEKLSGKSQ 302
NG +AL +F M + V+ D+V+L + +SACA L +++G+ +H + +KL
Sbjct: 231 NGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRND-- 288
Query: 303 SLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFEL 362
I L+NA + MYA C I+EA +F MP R+ I+ T+MI +A A +F
Sbjct: 289 ---IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 363 M 363
M
Sbjct: 346 M 346
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 157/342 (45%), Gaps = 21/342 (6%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAK-L 72
+QM+LE + + +T + ++ S +K ++H ++V + + IL+
Sbjct: 241 FQMMLESRVEPDEVTLASVISA-----CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAF 295
Query: 73 LSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
+ Y + A +F + +V MI G+A + S + + ++F +M AE N+
Sbjct: 296 VDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM----AERNV 351
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN-LYGMAGADFGVEYAQR 191
++++ L++G ++G E + + P + N++ +A G++
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 192 V------FDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARN 245
V F E +I NS++ +Y++CG VE +F KMMER+ V+W MI G+A+N
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
G +AL LF +M + D ++++ LSAC G + GR Y + L
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR---HYFSSMTRDFGVAPL 528
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICA 346
++ + G +EEA + MP + + + W +++ A
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 193/360 (53%), Gaps = 21/360 (5%)
Query: 17 LLEELIPANTITTSRILQ------QHLFHLLQSCKTLKYLSQIHTQIVIHGF---SQKSY 67
LL +P N ++T+ + + L L+ +++ + QIH I+ H +
Sbjct: 6 LLATSLPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPV 65
Query: 68 ILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
+ KL Y + G + + +F + +P + L+ I + + ++ +L+ Q+ ++E
Sbjct: 66 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE 125
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVE 187
PN T+S LL C+ + G+ +H VL G + ++ T L+++Y G V
Sbjct: 126 INPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGG---DVV 178
Query: 188 YAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
AQ+VFD M ER++V +M+ Y + GNVE AR +FD M ER++V+W MI GYA++G
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 248 CRQALILFNK-MRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
AL+LF K + D++++VAALSAC+++G L GRWIH +++ L +
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKS----SRIRLNV 294
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSL 366
+ LI MY+ CG +EEA VF P++ ++W MI +A GY+ +AL +F MQ +
Sbjct: 295 KVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGI 354
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 33/190 (17%)
Query: 211 YMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSL 270
Y G + + +F + ++ ++ +T I + NG QA +L+ ++ + ++ ++ +
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 271 VAALSACAELGDLRLGRWIHTYI---------------------------EEKLSGKSQS 303
+ L +C+ + G+ IHT++ +K+ +
Sbjct: 134 SSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 304 LLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+ + A+I YA G +E A +F M +R +SW MI +A+ G+ N+AL +F+ +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 364 QSLGANEAKP 373
L + KP
Sbjct: 250 --LAEGKPKP 257
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 59 IHGFSQKSYI------LAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH F + S I L+ Y G L A VF + + WN MI G+A
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 113 PRKSVILFNQMRAAEA-EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMK 170
+ ++ LFN+M+ +P +T+ L CA +GL+ EG ++ + G P +
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNI----VCWNSMLAVYMRCGNVEGARRIFDK 226
L++L G AG +R ++ + N+ V W+S+L G+ + I +
Sbjct: 401 GCLVSLLGRAGQ------LKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEY 454
Query: 227 MMERNV 232
++ N+
Sbjct: 455 LIGLNI 460
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 193/351 (54%), Gaps = 14/351 (3%)
Query: 24 ANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL-------SFY 76
+N + + + LLQSC + L IH ++ ++ ++LL +F
Sbjct: 2 SNIVLNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFN 61
Query: 77 IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
+ L A+ +F +++NP++ ++N +IR + P K+ + QM + P+ +T+
Sbjct: 62 KPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFP 121
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
FL+ + + GEQ H +++ G+ +V+++ +L+++Y G + A R+F +M
Sbjct: 122 FLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGF---IAAAGRIFGQM 178
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
G R++V W SM+A Y +CG VE AR +FD+M RN+ TW+ MI GYA+N +A+ LF
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 238
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMY 316
M+R V ++ +V+ +S+CA LG L G + Y+ + ++ + L AL+ M+
Sbjct: 239 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVK----SHMTVNLILGTALVDMF 294
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
CG IE+A VF +P+ ++SW+++I A G+A++A+ F M SLG
Sbjct: 295 WRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLG 345
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 186/342 (54%), Gaps = 11/342 (3%)
Query: 30 SRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGH--LLSAHK 87
SRI + LL S T K + QIH ++ + G + +++ + S H L A++
Sbjct: 2 SRIGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQ 61
Query: 88 VFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAA--EAEPNLLTYSFLLSGCARS 145
+ + P++ N MIR H +S P KS + ++ ++ + +P+ T +FL+ C
Sbjct: 62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121
Query: 146 GLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWN 205
+ G QVHG + G+ + ++T LI+LY G ++ +VF+ + + VC
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGC---LDSCHKVFNSIPCPDFVCRT 178
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
+M+ RCG+V AR++F+ M ER+ + W MI+GYA+ G+ R+AL +F+ M+ V +
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
+ V++++ LSAC +LG L GRW H+YIE + + L L+ +YA CG +E+A
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIER----NKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 326 YEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
EVF M +++ +W++ + A G+ + L +F LM+ G
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDG 336
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 146/356 (41%), Gaps = 74/356 (20%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L+Q+C L+ Q+H + GF ++ L+S Y G L S HKVF + P
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 97 VTL-------------------------------WNQMIRGHARSESPRKSVILFNQMRA 125
WN MI G+A+ R+++ +F+ M+
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 126 AEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG 185
+ N + +LS C + G L +G H + N V + T L++LY
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYA------- 286
Query: 186 VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARN 245
+CG++E A +F M E+NV TW++ + G A N
Sbjct: 287 ---------------------------KCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
G + L LF+ M++ V + V+ V+ L C+ +G + G+ + + + Q
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQ--- 376
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQGYANEALAIF 360
+ L+ +YA G +E+A + + MP + + + W++++ A + Y N L +
Sbjct: 377 LEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL--HASRMYKNLELGVL 430
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 182/365 (49%), Gaps = 48/365 (13%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLS---AHKVFKEVK 93
+ + K+L + Q H ++ G ++ +KL++F + + AH + +
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+P+ N +IR +A S +P ++ +F +M P+ +++F+L CA EG Q
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
+HG + +G +VF++ L+N+YG +G E A++V D M R+ V WNS+L+ Y+
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGY---FEIARKVLDRMPVRDAVSWNSLLSAYLE 218
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR-------------R 260
G V+ AR +FD+M ERNV +W MI+GYA G ++A +F+ M
Sbjct: 219 KGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAY 278
Query: 261 AHVDL-------------------DQVSLVAALSACAELGDLRLGRWIHTYIEE---KLS 298
AHV D +LV+ LSACA LG L G W+H YI++ ++
Sbjct: 279 AHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIE 338
Query: 299 GKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALA 358
G L AL+ MY+ CG I++A EVFR KR +W ++I + G +AL
Sbjct: 339 G-------FLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALE 391
Query: 359 IFELM 363
IF M
Sbjct: 392 IFSEM 396
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 38/263 (14%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE-P 130
++S Y A+G + A +VF + V WN M+ +A + + +FN+M E P
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+ T +LS CA G L +GE VH + +G F+ T L+++Y
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYS------------ 350
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+CG ++ A +F +R+V TW ++I+ + +G +
Sbjct: 351 ----------------------KCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
AL +F++M + ++ + LSAC +G L R + E S I
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKL---FEMMSSVYRVEPTIEHYG 445
Query: 311 ALIHMYASCGVIEEAYEVFRWMP 333
++ + G IEEA E+ +P
Sbjct: 446 CMVDLLGRMGKIEEAEELVNEIP 468
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 37/228 (16%)
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
+LS R+ L E +Q H +L G + + F + L+ V YA + + +G
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 198 ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK 257
N NS+ I YA + AL +F +
Sbjct: 102 SPNGFTHNSV-------------------------------IRAYANSSTPEVALTVFRE 130
Query: 258 MRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT-YIEEKLSGKSQSLLISLNNALIHMY 316
M V D+ S L ACA GR IH +I+ L + + N L+++Y
Sbjct: 131 MLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTD-----VFVENTLVNVY 185
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
G E A +V MP R +SW +++ A+ ++G +EA A+F+ M+
Sbjct: 186 GRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 111/238 (46%), Gaps = 15/238 (6%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +L +C +L LSQ +H I HG + ++ L+ Y G + A +VF+
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS 366
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
V+ WN +I + + ++ +F++M +PN +T+ +LS C G+L + +
Sbjct: 367 KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARK 426
Query: 154 VHGRVLVNGYY---PNVFMKTNLINLYGMAGADFGVEYAQRVFDEM-GERNIVCWNSMLA 209
+ +++ Y P + +++L G G +E A+ + +E+ + + S+L
Sbjct: 427 LFE--MMSSVYRVEPTIEHYGCMVDLLGRMGK---IEEAEELVNEIPADEASILLESLLG 481
Query: 210 VYMRCGNVEGARRIFDKMME---RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
R G +E A RI ++++E R+ + M YA +G+ + + MR V+
Sbjct: 482 ACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVN 539
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 184/345 (53%), Gaps = 11/345 (3%)
Query: 32 ILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLS--AHKVF 89
+L L L C L + QIH ++ G Q YIL KL+ G + A +V
Sbjct: 47 LLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVI 106
Query: 90 KEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLR 149
+ V+ + LW +IRG+A +++ ++ MR E P T+S LL C L
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA 209
G Q H + + V++ +I++Y + ++ A++VFDEM ER+++ W ++A
Sbjct: 167 LGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCES---IDCARKVFDEMPERDVISWTELIA 223
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
Y R GN+E A +F+ + +++V WT M+ G+A+N K ++AL F++M ++ + D+V+
Sbjct: 224 AYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVT 283
Query: 270 LVAALSACAELGDLRLG-RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ +SACA+LG + R + I +K SG S S + + +ALI MY+ CG +EEA V
Sbjct: 284 VAGYISACAQLGASKYADRAVQ--IAQK-SGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
F M ++ ++++MI A G A EAL +F M + E KP
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYM--VTQTEIKP 383
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 122/297 (41%), Gaps = 71/297 (23%)
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
+L++ Y G++ A ++F+ + + W M+ G A++ P++++ F++M +
Sbjct: 219 TELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPN--VFMKTNLINLYGMAGADFGVE 187
+ +T + +S CA+ G + ++ +GY P+ V + + LI++Y G VE
Sbjct: 279 ADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCG---NVE 335
Query: 188 YAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
A VF M +N V T+++MI G A +G+
Sbjct: 336 EAVNVFMSMNNKN-------------------------------VFTYSSMILGLATHGR 364
Query: 248 CRQALILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
++AL LF+ M + + + V+ V AL AC+ G + GR
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ------------------ 406
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
V + Y+ F P R + +T M+ + G EAL + + M
Sbjct: 407 --------------VFDSMYQTFGVQPTRDH--YTCMVDLLGRTGRLQEALELIKTM 447
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 61 GFSQKSYIL--AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVI 118
G+S +++ + L+ Y G++ A VF + N +V ++ MI G A ++++
Sbjct: 311 GYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALH 370
Query: 119 LFNQM-RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINL 176
LF+ M E +PN +T+ L C+ SGL+ +G QV + G P T +++L
Sbjct: 371 LFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDL 430
Query: 177 YGMAG 181
G G
Sbjct: 431 LGRTG 435
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 185/342 (54%), Gaps = 9/342 (2%)
Query: 33 LQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV 92
+++ L LL T L +IH ++ H + +LA +S + + A++VF +
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHI 62
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
+NP+V ++N MI+ ++ P +S+ F+ M++ + TY+ LL C+ LR G+
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
VHG ++ G++ ++ ++ LY +G G AQ+VFDEM ERN+V WN M+ +
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELY-TSGGRMG--DAQKVFDEMSERNVVVWNLMIRGFC 179
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
G+VE +F +M ER++V+W +MI+ ++ G+ R+AL LF +M D D+ ++V
Sbjct: 180 DSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVT 239
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
L A LG L G+WIH+ E SG + I++ NAL+ Y G +E A +FR M
Sbjct: 240 VLPISASLGVLDTGKWIHSTAES--SGLFKD-FITVGNALVDFYCKSGDLEAATAIFRKM 296
Query: 333 PKRSNISWTTMICAFAKQGYANEALAIFELMQSLG---ANEA 371
+R+ +SW T+I A G + +F+ M G NEA
Sbjct: 297 QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 151/365 (41%), Gaps = 79/365 (21%)
Query: 40 LLQSCKTL---KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LL+SC +L ++ +H +++ GF + I ++ Y + G + A KVF E+ +
Sbjct: 108 LLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERN 167
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQM-------------------RAAEA--------- 128
V +WN MIRG S + + LF QM R EA
Sbjct: 168 VVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMID 227
Query: 129 ---EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN-LINLYGMAGADF 184
+P+ T +L A G+L G+ +H +G + + N L++ Y +G
Sbjct: 228 QGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG--- 284
Query: 185 GVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYAR 244
+E A +F +M RN+V WN T+I+G A
Sbjct: 285 DLEAATAIFRKMQRRNVVSWN-------------------------------TLISGSAV 313
Query: 245 NGKCRQALILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEE--KLSGKS 301
NGK + LF+ M V ++ + + L+ C+ G + G + + E KL ++
Sbjct: 314 NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEART 373
Query: 302 QSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQGYANEA-LAI 359
+ A++ + + G I EA++ + MP +N + W +++ A G A +A
Sbjct: 374 EHY-----GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAA 428
Query: 360 FELMQ 364
EL++
Sbjct: 429 MELVK 433
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 182/332 (54%), Gaps = 12/332 (3%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQK----SYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
L + C L+ LS + I+ H + S++ + + + G + +A KVF E
Sbjct: 162 LFKVCADLR-LSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR 220
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+ WN +I G+ + K++ ++ M + +P+ +T L+S C+ G L G++ +
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
V NG + + L++++ G + A+R+FD + +R IV W +M++ Y RCG
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCG---DIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
++ +R++FD M E++VV W MI G + + + AL LF +M+ ++ D+++++ LS
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
AC++LG L +G WIH YIE+ S SL ++L +L+ MYA CG I EA VF + R
Sbjct: 398 ACSQLGALDVGIWIHRYIEK----YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR 453
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+++++T +I A G A+ A++ F M G
Sbjct: 454 NSLTYTAIIGGLALHGDASTAISYFNEMIDAG 485
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 169/342 (49%), Gaps = 43/342 (12%)
Query: 28 TTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYI--ASGHLLSA 85
T S +L L LL+ CK L +L QI Q++I+G + ++L++F S +L +
Sbjct: 47 THSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYS 106
Query: 86 HKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM---RAAEAEPNLLTYSFLLSGC 142
K+ K ++NP++ WN IRG + SE+P++S +L+ QM E+ P+ TY L C
Sbjct: 107 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 166
Query: 143 ARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIV 202
A L G + G VL + I+++ G +E A++VFDE R++V
Sbjct: 167 ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCG---DMENARKVFDESPVRDLV 223
Query: 203 CWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAH 262
WN + I GY + G+ +A+ ++ M
Sbjct: 224 SWNCL-------------------------------INGYKKIGEAEKAIYVYKLMESEG 252
Query: 263 VDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVI 322
V D V+++ +S+C+ LGDL G+ + Y++E + I L NAL+ M++ CG I
Sbjct: 253 VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE----NGLRMTIPLVNALMDMFSKCGDI 308
Query: 323 EEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
EA +F + KR+ +SWTTMI +A+ G + + +F+ M+
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME 350
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 144/328 (43%), Gaps = 46/328 (14%)
Query: 20 ELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILA--KLLSFYI 77
E + N + + L L + C IH I +K I++ ++S Y
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKC------GDIHEARRIFDNLEKRTIVSWTTMISGYA 334
Query: 78 ASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSF 137
G L + K+F +++ V LWN MI G +++ + ++ LF +M+ + +P+ +T
Sbjct: 335 RCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
LS C++ G L G +H + NV + T+L+++Y
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMY-------------------- 434
Query: 198 ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK 257
+CGN+ A +F + RN +T+T +I G A +G A+ FN+
Sbjct: 435 --------------AKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNE 480
Query: 258 MRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYA 317
M A + D+++ + LSAC G ++ GR + ++ + + Q S+ ++ +
Sbjct: 481 MIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI---MVDLLG 537
Query: 318 SCGVIEEAYEVFRWMPKRSNIS-WTTMI 344
G++EEA + MP ++ + W ++
Sbjct: 538 RAGLLEEADRLMESMPMEADAAVWGALL 565
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 186/346 (53%), Gaps = 17/346 (4%)
Query: 24 ANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLL 83
+NT+ SR ++ L +L+SCK + ++ IH +I+ Q ++++ +L+ +
Sbjct: 67 SNTLRLSR--RKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD 124
Query: 84 SAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA 143
A+ VF V NP+V L+ MI G S V L+++M P+ + +L C
Sbjct: 125 YAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD 184
Query: 144 RSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVC 203
L+ ++H +VL G+ + + ++ +YG +G + A+++FDEM +R+ V
Sbjct: 185 ----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGE---LVNAKKMFDEMPDRDHVA 237
Query: 204 WNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
M+ Y CG ++ A +F + ++ V WT MI G RN + +AL LF +M+ +V
Sbjct: 238 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 297
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS--LNNALIHMYASCGV 321
++ + V LSAC++LG L LGRW+H+++E +Q + +S + NALI+MY+ CG
Sbjct: 298 SANEFTAVCVLSACSDLGALELGRWVHSFVE------NQRMELSNFVGNALINMYSRCGD 351
Query: 322 IEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
I EA VFR M + IS+ TMI A G + EA+ F M + G
Sbjct: 352 INEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 397
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 155/370 (41%), Gaps = 79/370 (21%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
++M+ ++P N + TS +L++C LK +IH Q++ GF + K++
Sbjct: 162 HRMIHNSVLPDNYVITS---------VLKACD-LKVCREIHAQVLKLGFGSSRSVGLKMM 211
Query: 74 SFYIASGHLLSAHKVFKE-------------------------------VKNPSVTLWNQ 102
Y SG L++A K+F E VK W
Sbjct: 212 EIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTA 271
Query: 103 MIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNG 162
MI G R++ K++ LF +M+ N T +LS C+ G L G VH
Sbjct: 272 MIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHS------ 325
Query: 163 YYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARR 222
F++ + L G N+++ +Y RCG++ ARR
Sbjct: 326 -----FVENQRMELSNFVG-----------------------NALINMYSRCGDINEARR 357
Query: 223 IFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD 282
+F M +++V+++ TMI+G A +G +A+ F M +QV+LVA L+AC+ G
Sbjct: 358 VFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGL 417
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWT 341
L +G + ++ + + Q I ++ + G +EEAY +P + +I
Sbjct: 418 LDIGLEVFNSMKRVFNVEPQ---IEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLG 474
Query: 342 TMICAFAKQG 351
T++ A G
Sbjct: 475 TLLSACKIHG 484
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 182/333 (54%), Gaps = 13/333 (3%)
Query: 38 FHLLQSCKTLKYLSQIHTQIVIHGFSQK------SYILAKLLSFYIASGHLLSAHKVFKE 91
F L K + +S + + +HG + K ++ + Y + G + A VF E
Sbjct: 112 FSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE 171
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
+ + V WN MI + R ++ LF +M+ + P+ + ++S C R+G +R
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
++ ++ N + + T L+ +Y AG ++ A+ F +M RN+ +M++ Y
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGC---MDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
+CG ++ A+ IFD+ ++++V WTTMI+ Y + ++AL +F +M + + D VS+
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
+ +SACA LG L +W+H+ I ++G L S+NNALI+MYA CG ++ +VF
Sbjct: 349 SVISACANLGILDKAKWVHSCIH--VNGLESEL--SINNALINMYAKCGGLDATRDVFEK 404
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
MP+R+ +SW++MI A + G A++AL++F M+
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMK 437
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 171/356 (48%), Gaps = 33/356 (9%)
Query: 23 PANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHL 82
P + + IL++ L CK+L ++ Q+H I+ ++ I KL SF
Sbjct: 6 PIASTAANTILEK-----LSFCKSLNHIKQLHAHIL------RTVINHKLNSFLFNLSVS 54
Query: 83 LS------AHKVFKEVKNPSVTL-WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
S A VF + +P ++ +N +R +RS PR +++ + ++R + ++
Sbjct: 55 SSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSF 114
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
+L ++ L EG ++HG + F++T +++Y G + YA+ VFDE
Sbjct: 115 LPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGR---INYARNVFDE 171
Query: 196 MGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVT----WTTMIAGYARNGKCRQA 251
M R++V WN+M+ Y R G V+ A ++F++M + NV+ +++ R G R
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
++ + V +D L A ++ A G + + R K+S ++L +S A
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF----RKMS--VRNLFVS--TA 283
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++ Y+ CG +++A +F K+ + WTTMI A+ + Y EAL +FE M G
Sbjct: 284 MVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 38/286 (13%)
Query: 67 YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAA 126
++ ++S Y G L A +F + + + W MI + S+ P++++ +F +M +
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS 338
Query: 127 EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
+P++++ ++S CA G+L + + VH + VNG + + LIN+Y
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA-------- 390
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNG 246
+CG ++ R +F+KM RNVV+W++MI + +G
Sbjct: 391 --------------------------KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHG 424
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
+ AL LF +M++ +V+ ++V+ V L C+ G + G+ I + ++ + + +
Sbjct: 425 EASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPK---L 481
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQG 351
++ ++ ++ EA EV MP SN+ W +++ A G
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 190/341 (55%), Gaps = 16/341 (4%)
Query: 34 QQHLFHLLQSCKTLKYLSQIHTQIVIHG-FSQKSYILAKLLSFYIASGHLLSAHKVFKEV 92
+Q +L+++ L + QIH I++ G S +Y+ L+ FY+ G+ A KVF +
Sbjct: 133 RQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARM 192
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
+P V+ +N MI G+A+ +++ L+ +M + EP+ T LL C +R G+
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 153 QVHGRVLVNG--YYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAV 210
VHG + G Y N+ + L+++Y + G+ A+R FD M ++++ WN+M+
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMY-FKCKESGL--AKRAFDAMKKKDMRSWNTMVVG 309
Query: 211 YMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI--LFNKMRRAH-VDLDQ 267
++R G++E A+ +FD+M +R++V+W +++ GY++ G C Q + LF +M V D+
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG-CDQRTVRELFYEMTIVEKVKPDR 368
Query: 268 VSLVAALSACAELGDLRLGRWIHT-YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
V++V+ +S A G+L GRW+H I +L G + L++ALI MY CG+IE A+
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA-----FLSSALIDMYCKCGIIERAF 423
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
VF+ ++ WT+MI A G +AL +F MQ G
Sbjct: 424 MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG 464
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 42/294 (14%)
Query: 76 YIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVI-LFNQMRAAE-AEPNLL 133
++ G + +A VF ++ + WN ++ G+++ +++V LF +M E +P+ +
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRV 369
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
T L+SG A +G L G VHG V+ + F+ + LI++Y
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMY---------------- 413
Query: 194 DEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
+CG +E A +F E++V WT+MI G A +G +QAL
Sbjct: 414 ------------------CKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQ 455
Query: 254 LFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALI 313
LF +M+ V + V+L+A L+AC+ G + G + ++++K ++ +L+
Sbjct: 456 LFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPET---EHYGSLV 512
Query: 314 HMYASCGVIEEAYEVF-RWMPKRSNIS-WTTMICAF-AKQGYANEALAIFELMQ 364
+ G +EEA ++ + MP R + S W +++ A + LA+ EL++
Sbjct: 513 DLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLK 566
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 11 QSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILA 70
Q + + L E+ + R+ L + L + +H ++ +++ +
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
L+ Y G + A VFK V LW MI G A + ++++ LF +M+ P
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAG 181
N +T +L+ C+ SGL+ EG V + G+ P +L++L AG
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAG 519
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 161/315 (51%), Gaps = 7/315 (2%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
++H +V G Y+ L+ Y G + A VF V WN MI G+ R +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+S+ L +M P +T +LS C++ ++VH V P++ ++
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
L+N Y G ++ A R+F M R+++ W S++ Y+ GN++ AR FD+M R+
Sbjct: 276 ALVNAYAACGE---MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
++WT MI GY R G ++L +F +M+ A + D+ ++V+ L+ACA LG L +G WI T
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
YI++ + + NALI MY CG E+A +VF M +R +WT M+ A G
Sbjct: 393 YIDKNKIKND----VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 352 YANEALAIFELMQSL 366
EA+ +F MQ +
Sbjct: 449 QGQEAIKVFFQMQDM 463
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 72/362 (19%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIA--SGHLLSAHKVFKEVKNPSV 97
+L CKT Q+H+Q + G + KL F+ + GH+ A+K+F ++ P V
Sbjct: 40 ILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDV 99
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARS-GLLREGEQVHG 156
+WN MI+G ++ + + V L+ M P+ T+ FLL+G R G L G+++H
Sbjct: 100 VVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
V+ G N++++ L+ +Y + G ++ A+ VFD + ++ WN M++ Y R
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGL---MDMARGVFDRRCKEDVFSWNLMISGYNRMKE 216
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
E + + + MERN+V+ T+ V+L+ LSA
Sbjct: 217 YEESIELLVE-MERNLVSPTS------------------------------VTLLLVLSA 245
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR------ 330
C+++ D L + +H Y+ E + S + L NAL++ YA+CG ++ A +FR
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKTEPS----LRLENALVNAYAACGEMDIAVRIFRSMKARD 301
Query: 331 ---W----------------------MPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
W MP R ISWT MI + + G NE+L IF MQS
Sbjct: 302 VISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 366 LG 367
G
Sbjct: 362 AG 363
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 139/277 (50%), Gaps = 9/277 (3%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L++ Y A G + A ++F+ +K V W +++G+ + + + F+QM +
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR--- 333
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
++++ ++ G R+G E ++ + G P+ F +++ G+ E+ +
Sbjct: 334 -ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 192 VFDEMGERN-IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
D+ +N +V N+++ +Y +CG E A+++F M +R+ TWT M+ G A NG+ ++
Sbjct: 393 YIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQE 452
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
A+ +F +M+ + D ++ + LSAC G + R + + + + + L+
Sbjct: 453 AIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQAR--KFFAKMRSDHRIEPSLVHY-G 509
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICA 346
++ M G+++EAYE+ R MP N I W ++ A
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGA 546
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 180/339 (53%), Gaps = 46/339 (13%)
Query: 35 QHLFHLLQS--CKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIAS----GHLLSAHKV 88
+ +LLQ+ ++ L QIH + HG S L K L FY+ S + AHKV
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV 75
Query: 89 FKEVKNP-SVTLWNQMIRGHARSESPRKSVILFNQMRAAE-AEPNLLTYSFLLSGCARSG 146
F +++ P +V +WN +IRG+A + + L+ +MR + EP+ TY FL+
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS 206
+R GE +H V+ +G+ ++++ NS
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQ----------------------------------NS 161
Query: 207 MLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
+L +Y CG+V A ++FDKM E+++V W ++I G+A NGK +AL L+ +M + D
Sbjct: 162 LLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPD 221
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
++V+ LSACA++G L LG+ +H Y+ + G +++L S N L+ +YA CG +EEA
Sbjct: 222 GFTIVSLLSACAKIGALTLGKRVHVYMIK--VGLTRNLHSS--NVLLDLYARCGRVEEAK 277
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+F M ++++SWT++I A G+ EA+ +F+ M+S
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 41/316 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH+ ++ GF Y+ LL Y G + SA+KVF ++ + WN +I G A +
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
P +++ L+ +M + +P+ T LLS CA+ G L G++VH ++ G N+
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
L++LY G VE A+ +FDEM ++N
Sbjct: 263 LLDLYARCGR---VEEAKTLFDEMVDKN-------------------------------S 288
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD-QVSLVAALSACAELGDLRLGRWIHT 291
V+WT++I G A NG ++A+ LF M L +++ V L AC+ G ++ G
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 348
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQ 350
+ E+ + + I ++ + A G +++AYE + MP + N+ W T++ A
Sbjct: 349 RMREEYKIEPR---IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 351 GYANEALAIFELMQSL 366
G ++ LA F +Q L
Sbjct: 406 GDSD--LAEFARIQIL 419
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 84/150 (56%), Gaps = 6/150 (4%)
Query: 220 ARRIFDKMMER-NVVTWTTMIAGYARNGKCRQALILFNKMRRAH-VDLDQVSLVAALSAC 277
A ++F K+ + NV W T+I GYA G A L+ +MR + V+ D + + A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
+ D+RLG IH+ + G LI + N+L+H+YA+CG + AY+VF MP++
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGS----LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
++W ++I FA+ G EALA++ M S G
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKG 217
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 186/363 (51%), Gaps = 43/363 (11%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAK---------------------- 71
L LLQ C K L Q IH + I GF + + +L+
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 72 ----------LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFN 121
++S Y+ SG L+ A VF + V WN M+ G+A+ + +++ +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 122 QMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAG 181
+ R + + N +++ LL+ C +S L+ Q HG+VLV G+ NV + ++I+ Y G
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 182 ADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAG 241
+E A+R FDEM ++I W ++++ Y + G++E A ++F +M E+N V+WT +IAG
Sbjct: 229 Q---MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAG 285
Query: 242 YARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKS 301
Y R G +AL LF KM V +Q + + L A A + LR G+ IH Y+ + + +
Sbjct: 286 YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRP 344
Query: 302 QSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAFAKQGYANEALAIF 360
+++IS +LI MY+ G +E + VFR + + + W TMI A A+ G ++AL +
Sbjct: 345 NAIVIS---SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 361 ELM 363
+ M
Sbjct: 402 DDM 404
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 134/262 (51%), Gaps = 39/262 (14%)
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYY-PNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
LL C + L++G+ +H + + G+ PN + +LI +Y G A +VFD+M
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPID---ACKVFDQM 108
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
RN+ WN+M++ Y++ G + AR +FD M ER+VV+W TM+ GYA++G +AL +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMY 316
+ RR+ + ++ S L+AC + L+L R H + ++G ++++S ++I Y
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV--LVAGFLSNVVLSC--SIIDAY 224
Query: 317 ASCGVIEEAYEVFR---------W----------------------MPKRSNISWTTMIC 345
A CG +E A F W MP+++ +SWT +I
Sbjct: 225 AKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIA 284
Query: 346 AFAKQGYANEALAIFELMQSLG 367
+ +QG N AL +F M +LG
Sbjct: 285 GYVRQGSGNRALDLFRKMIALG 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 36/227 (15%)
Query: 67 YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAA 126
+I L+S Y G + +A K+F E+ + W +I G+ R S +++ LF +M A
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 127 EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
+P T+S L A LR G+++HG ++ PN + ++LI++Y
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYS-------- 357
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER-NVVTWTTMIAGYARN 245
+ G++E + R+F ++ + V W TMI+ A++
Sbjct: 358 --------------------------KSGSLEASERVFRICDDKHDCVFWNTMISALAQH 391
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG-RWIHT 291
G +AL + + M + V ++ +LV L+AC+ G + G RW +
Sbjct: 392 GLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFES 438
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 9/231 (3%)
Query: 43 SCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP-SVTLWN 101
S +L++ +IH ++ + +++ L+ Y SG L ++ +VF+ + WN
Sbjct: 323 SIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWN 382
Query: 102 QMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLV- 160
MI A+ K++ + + M +PN T +L+ C+ SGL+ EG + + V
Sbjct: 383 TMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQ 442
Query: 161 NGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEG 219
+G P+ LI+L G AG + R +EM E + WN++L V GN E
Sbjct: 443 HGIVPDQEHYACLIDLLGRAGC---FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEEL 499
Query: 220 ARRIFDKMME---RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
++ D++++ + + + + YA +GK L M++ V+ ++
Sbjct: 500 GKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEK 550
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
+R + + ++ +A + QA+ + + + L L + L C + L+ G+W
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 289 IHTYIEEKLSG-KSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
IH ++ K++G K + L+S N LI MY CG +A +VF M R+ SW M+ +
Sbjct: 68 IHRHL--KITGFKRPNTLLS--NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGY 123
Query: 348 AKQGYANEALAIFELM 363
K G A +F+ M
Sbjct: 124 VKSGMLVRARVVFDSM 139
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 162/283 (57%), Gaps = 10/283 (3%)
Query: 85 AHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCAR 144
A+K ++ +P WN +IRG + S +P KS+ ++ QM P+ +TY FL+ +R
Sbjct: 807 AYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSR 866
Query: 145 SGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCW 204
+ G +H V+ +G ++F+ LI++YG A+++FDEM +N+V W
Sbjct: 867 LSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQAS---ARKLFDEMPHKNLVTW 923
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK-MRRAHV 263
NS+L Y + G+V AR +FD+M ER+VVTW++MI GY + G+ +AL +F++ MR
Sbjct: 924 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 983
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
++V++V+ + ACA LG L G+ +H YI + L + L +LI MYA CG I
Sbjct: 984 KANEVTMVSVICACAHLGALNRGKTVHRYILD----VHLPLTVILQTSLIDMYAKCGSIG 1039
Query: 324 EAYEVF-RWMPKRSN-ISWTTMICAFAKQGYANEALAIFELMQ 364
+A+ VF R K ++ + W +I A G+ E+L +F M+
Sbjct: 1040 DAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR 1082
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 49/269 (18%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEP 130
+L Y SG ++SA VF E+ V W+ MI G+ + K++ +F+QM R ++
Sbjct: 926 ILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKA 985
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP-NVFMKTNLINLYGMAGADFGVEYA 189
N +T ++ CA G L G+ VH R +++ + P V ++T+LI++Y
Sbjct: 986 NEVTMVSVICACAHLGALNRGKTVH-RYILDVHLPLTVILQTSLIDMYA----------- 1033
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK--MMERNVVTWTTMIAGYARNGK 247
+CG++ A +F + + E + + W +I G A +G
Sbjct: 1034 -----------------------KCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGF 1070
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSG---KSQSL 304
R++L LF+KMR + +D D+++ + L+AC+ G L W H + K SG KS+
Sbjct: 1071 IRESLQLFHKMRESKIDPDEITFLCLLAACSH-GGLVKEAW-HFFKSLKESGAEPKSEHY 1128
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMP 333
++ + + G++++A++ MP
Sbjct: 1129 A-----CMVDVLSRAGLVKDAHDFISEMP 1152
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 57/327 (17%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
+++++ KNP V + +I G S P +++ +N+M+ + PN +T+ L+ G + G
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 147 -------LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
RE E+ Y V + N+ A FG+ F EM +
Sbjct: 734 WSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENI----NAGFGI------FREMVHK 783
Query: 200 N----IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILF 255
V N MLAV + +V+ A + K+ + W +I G++ + +++ ++
Sbjct: 784 GRFPVSVDRNYMLAVNVT-SDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVY 842
Query: 256 NKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
+M R + D ++ + + + L + +LG +H + + SG L I N LIHM
Sbjct: 843 IQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVK--SGLEWDLFIC--NTLIHM 898
Query: 316 YAS-------------------------------CGVIEEAYEVFRWMPKRSNISWTTMI 344
Y S G + A VF M +R ++W++MI
Sbjct: 899 YGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMI 958
Query: 345 CAFAKQGYANEALAIFELMQSLGANEA 371
+ K+G N+AL IF+ M +G+++A
Sbjct: 959 DGYVKRGEYNKALEIFDQMMRMGSSKA 985
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 24/251 (9%)
Query: 24 ANTITTSRILQQ--HLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGH 81
AN +T ++ HL L + +Y+ +H + + + L+ Y G
Sbjct: 985 ANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTV-------ILQTSLIDMYAKCGS 1037
Query: 82 LLSAHKVF--KEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
+ A VF VK +WN +I G A R+S+ LF++MR ++ +P+ +T+ LL
Sbjct: 1038 IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 1097
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
+ C+ GL++E + +G P ++++ AG + D + E
Sbjct: 1098 AACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAG------LVKDAHDFISEM 1151
Query: 200 NIVCWNSMLAVYMR-C---GNVEGARRIFDKMME---RNVVTWTTMIAGYARNGKCRQAL 252
I SML + C GN+E A + K++E N + + YA N + R A
Sbjct: 1152 PIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAAR 1211
Query: 253 ILFNKMRRAHV 263
+ M + V
Sbjct: 1212 SMREAMEKKGV 1222
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 148/251 (58%), Gaps = 10/251 (3%)
Query: 120 FNQMRAAEAEPNLLTYSFLLSGCAR--SGLLREGEQVHGRVLVNGYYPN-VFMKTNLINL 176
F+ M A EPN +T+ LLSGC SG G+ +HG G N V + T +I +
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 177 YGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWT 236
Y G + A+ VFD M ++N V WN+M+ YMR G V+ A ++FDKM ER++++WT
Sbjct: 119 YSKRGR---FKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWT 175
Query: 237 TMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEK 296
MI G+ + G +AL+ F +M+ + V D V+++AAL+AC LG L G W+H Y+
Sbjct: 176 AMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV--- 232
Query: 297 LSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEA 356
LS ++ + ++N+LI +Y CG +E A +VF M KR+ +SW ++I FA G A+E+
Sbjct: 233 LSQDFKN-NVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHES 291
Query: 357 LAIFELMQSLG 367
L F MQ G
Sbjct: 292 LVYFRKMQEKG 302
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 147/306 (48%), Gaps = 16/306 (5%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFS-----QKSYIL--AKLLSFYIASGHLLSAHKVFKEV 92
LL C S+ + +HG++ +++++ ++ Y G A VF +
Sbjct: 77 LLSGCGDFTSGSEALGDL-LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYM 135
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
++ + WN MI G+ RS + +F++M E +L++++ +++G + G E
Sbjct: 136 EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKM----PERDLISWTAMINGFVKKGYQEEAL 191
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGA-DFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+ ++G P+ +N GA FG+ + V + + N+ NS++ +Y
Sbjct: 192 LWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLY 251
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
RCG VE AR++F M +R VV+W ++I G+A NG ++L+ F KM+ D V+
Sbjct: 252 CRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFT 311
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
AL+AC+ +G + G Y + S I L+ +Y+ G +E+A ++ +
Sbjct: 312 GALTACSHVGLVEEGL---RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 332 MPKRSN 337
MP + N
Sbjct: 369 MPMKPN 374
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 46/174 (26%)
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE-------LGDL- 283
V+WT+ I RNG+ +A F+ M A V+ + ++ +A LS C + LGDL
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 284 -----RLG-------------------------RWIHTYIEEKLSGKSQSLLISLNNALI 313
+LG R + Y+E+K S N +I
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNS--------VTWNTMI 147
Query: 314 HMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
Y G ++ A ++F MP+R ISWT MI F K+GY EAL F MQ G
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 41 LQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
L +C L LS +H ++ F + L+ Y G + A +VF ++ +V
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
WN +I G A + + +S++ F +M+ +P+ +T++ L+ C+ GL+ EG + + +
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQ 331
Query: 158 VLVNGY--YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER-NIVCWNSMLAVYMRC 214
++ Y P + L++LY AG +E A ++ M + N V S+LA
Sbjct: 332 IMKCDYRISPRIEHYGCLVDLYSRAGR---LEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 215 G-NVEGARRIFDKMMERNVVT---WTTMIAGYARNGKCRQALILFNKMRR 260
G N+ A R+ + + NV + + + YA +GK A +KMRR
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGA----SKMRR 434
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 154/276 (55%), Gaps = 16/276 (5%)
Query: 99 LWNQMIRG--HARSESPRKSVI-LFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
LWN +IR H S R S I ++ +MR P+ T+ FLL L G++ H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
++L+ G + F++T+L+N+Y G + AQRVFD+ G +++ WNS++ Y + G
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCG---DLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR-----RAHVDLDQVSL 270
++ AR++FD+M ERNV++W+ +I GY GK ++AL LF +M+ A V ++ ++
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
LSAC LG L G+W+H YI++ + I L ALI MYA CG +E A VF
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDK----YHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 331 WMPKRSNI-SWTTMICAFAKQGYANEALAIFELMQS 365
+ + ++ +++ MIC A G +E +F M +
Sbjct: 259 ALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTT 294
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 75/325 (23%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS- 110
+ H QI++ G + ++ LL+ Y + G L SA +VF + + + WN ++ +A++
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 111 ----------ESPRKSVI--------------------LFNQMR-----AAEAEPNLLTY 135
E P ++VI LF +M+ A PN T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
S +LS C R G L +G+ VH + ++ + T LI++Y G+ +E A+RVF+
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGS---LERAKRVFNA 259
Query: 196 MGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILF 255
+G + ++V ++ MI A G + LF
Sbjct: 260 LGSK------------------------------KDVKAYSAMICCLAMYGLTDECFQLF 289
Query: 256 NKMRRA-HVDLDQVSLVAALSACAELGDLRLGR-WIHTYIEEKLSGKSQSLLISLNNALI 313
++M + +++ + V+ V L AC G + G+ + IEE G + S I ++
Sbjct: 290 SEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE--FGITPS--IQHYGCMV 345
Query: 314 HMYASCGVIEEAYEVFRWMPKRSNI 338
+Y G+I+EA MP ++
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDV 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+ SL+ S+C GDLR +++ S S + N++++ YA G+I++A
Sbjct: 100 RTSLLNMYSSC---GDLRSA--------QRVFDDSGSKDLPAWNSVVNAYAKAGLIDDAR 148
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEA 371
++F MP+R+ ISW+ +I + G EAL +F MQ NEA
Sbjct: 149 KLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA 193
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 169/326 (51%), Gaps = 38/326 (11%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
++++ +K L Q+H +++ G+ + +L KL++ ++ + H +F V P L
Sbjct: 15 IVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFL 74
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
+N +I+ ++ P V + +M ++ P+ T++ ++ CA LR G+ VH +
Sbjct: 75 FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAV 134
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
V+G+ + +++ L+ Y +CG++EG
Sbjct: 135 VSGFGLDTYVQAALVTFYS----------------------------------KCGDMEG 160
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
AR++FD+M E+++V W ++++G+ +NG +A+ +F +MR + + D + V+ LSACA+
Sbjct: 161 ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ 220
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
G + LG W+H YI + L + L ALI++Y+ CG + +A EVF M + + +
Sbjct: 221 TGAVSLGSWVHQYI----ISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAA 276
Query: 340 WTTMICAFAKQGYANEALAIFELMQS 365
WT MI A+ GY +A+ +F M+
Sbjct: 277 WTAMISAYGTHGYGQQAVELFNKMED 302
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 156/342 (45%), Gaps = 58/342 (16%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAK 71
+ML + P+N TS +++SC L L +H V+ GF +Y+ A
Sbjct: 97 RMLSSNVSPSNYTFTS---------VIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAA 147
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L++FY G + A +VF + S+ WN ++ G ++ +++ +F QMR + EP+
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
T+ LLS CA++G + G VH ++ G NV + T LINLY G D G A+
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCG-DVG--KARE 264
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
VFD+M E N+ W +M+ + Y +G +QA
Sbjct: 265 VFDKMKETNVAAWTAMI-------------------------------SAYGTHGYGQQA 293
Query: 252 LILFNKMRRAHVDL-DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
+ LFNKM + + V+ VA LSACA G + GR ++ K KS L+ + +
Sbjct: 294 VELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVY-----KRMTKSYRLIPGVEH 348
Query: 311 --ALIHMYASCGVIEEAYEVFRWMPKRSNIS----WTTMICA 346
++ M G ++EAY+ + + WT M+ A
Sbjct: 349 HVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
+ +M ++V + + + +CA+L LR+G+ +H + +SG L + AL+
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCH--AVVSGFG--LDTYVQAALVT 150
Query: 315 MYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
Y+ CG +E A +VF MP++S ++W +++ F + G A+EA+ +F M+ G
Sbjct: 151 FYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 176/368 (47%), Gaps = 44/368 (11%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L +L + ++ L +H++I++ S + KL+ Y + + SA KVF E+ +
Sbjct: 45 LGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V + N MIR + + + V +F M P+ T+ +L C+ SG + G ++HG
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR--- 213
G +F+ L+++YG G + A+ V DEM R++V WNS++ Y +
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGF---LSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 214 -------CGNVEGAR---------------------------RIFDKMMERNVVTWTTMI 239
C +E + +F KM ++++V+W MI
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMI 281
Query: 240 AGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSG 299
Y +N +A+ L+++M + D VS+ + L AC + L LG+ IH YIE K
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK--K 339
Query: 300 KSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAI 359
+LL L NALI MYA CG +E+A +VF M R +SWT MI A+ G +A+A+
Sbjct: 340 LIPNLL--LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 360 FELMQSLG 367
F +Q G
Sbjct: 398 FSKLQDSG 405
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 150/337 (44%), Gaps = 58/337 (17%)
Query: 10 FQSSYQMLLEEL-----IPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQ 64
F S +++L+E+ + N++ Q L+ C+ ++ + S
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK----------ISH 239
Query: 65 KSYILAKLLSFY--IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQ 122
+ +A LL + +++ +F ++ S+ WN MI + ++ P ++V L+++
Sbjct: 240 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 123 MRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA 182
M A EP+ ++ + +L C + L G+++HG + PN+ ++ LI++
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM------ 353
Query: 183 DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGY 242
Y +CG +E AR +F+ M R+VV+WT MI+ Y
Sbjct: 354 ----------------------------YAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 243 ARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEE--KLSGK 300
+G+ A+ LF+K++ + + D ++ V L+AC+ G L GR + + K++ +
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 301 SQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
+ L ++ + G ++EAY + M N
Sbjct: 446 LEHLA-----CMVDLLGRAGKVKEAYRFIQDMSMEPN 477
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 175/371 (47%), Gaps = 50/371 (13%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L +L + ++ L +H++I++ S + KL+ Y + + SA KVF E+ +
Sbjct: 45 LGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V + N MIR + + + V +F M P+ T+ +L C+ SG + G ++HG
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR--- 213
G +F+ L+++YG G + A+ V DEM R++V WNS++ Y +
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGF---LSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 214 -------CGNVEGAR---------------------------RIFDKMMERNVVTWTTMI 239
C +E + +F KM ++++V+W MI
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMI 281
Query: 240 AGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSG 299
Y +N +A+ L+++M + D VS+ + L AC + L LG+ IH YIE K
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK-- 339
Query: 300 KSQSLLIS---LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEA 356
LI L NALI MYA CG +E+A +VF M R +SWT MI A+ G +A
Sbjct: 340 -----LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 394
Query: 357 LAIFELMQSLG 367
+A+F +Q G
Sbjct: 395 VALFSKLQDSG 405
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 150/337 (44%), Gaps = 58/337 (17%)
Query: 10 FQSSYQMLLEEL-----IPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQ 64
F S +++L+E+ + N++ Q L+ C+ ++ + S
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK----------ISH 239
Query: 65 KSYILAKLLSFY--IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQ 122
+ +A LL + +++ +F ++ S+ WN MI + ++ P ++V L+++
Sbjct: 240 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 123 MRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA 182
M A EP+ ++ + +L C + L G+++HG + PN+ ++ LI++
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM------ 353
Query: 183 DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGY 242
Y +CG +E AR +F+ M R+VV+WT MI+ Y
Sbjct: 354 ----------------------------YAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 243 ARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEE--KLSGK 300
+G+ A+ LF+K++ + + D ++ V L+AC+ G L GR + + K++ +
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 301 SQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
+ L ++ + G ++EAY + M N
Sbjct: 446 LEHLA-----CMVDLLGRAGKVKEAYRFIQDMSMEPN 477
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 170/351 (48%), Gaps = 41/351 (11%)
Query: 19 EELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIA 78
E L AN +S Q L + + +++ +H VI G +IL+ L Y
Sbjct: 3 EVLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCH-VITGGRVSGHILSTLSVTYAL 61
Query: 79 SGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM--RAAEAEPNLLTYS 136
GH+ A K+F+E+ S+ +N +IR + R ++ +F +M + P+ TY
Sbjct: 62 CGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYP 121
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
F+ ++ G VHGR+L + + G D +Y Q
Sbjct: 122 FVAKAAGELKSMKLGLVVHGRILRSWF-----------------GRD---KYVQ------ 155
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
N++LA+YM G VE AR +FD M R+V++W TMI+GY RNG AL++F+
Sbjct: 156 --------NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD 207
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMY 316
M VDLD ++V+ L C L DL +GR +H +EEK G I + NAL++MY
Sbjct: 208 WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK----IEVKNALVNMY 263
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
CG ++EA VF M +R I+WT MI + + G AL + LMQ G
Sbjct: 264 LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 40/321 (12%)
Query: 45 KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMI 104
K++K +H +I+ F + Y+ LL+ Y+ G + A VF +KN V WN MI
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 105 RGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
G+ R+ ++++F+ M + + T +L C L G VH V
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV------ 244
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIF 224
+R+ D++ +N +++ +Y++CG ++ AR +F
Sbjct: 245 -----------------------EEKRLGDKIEVKN-----ALVNMYLKCGRMDEARFVF 276
Query: 225 DKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLR 284
D+M R+V+TWT MI GY +G AL L M+ V + V++ + +S C + +
Sbjct: 277 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 285 LGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTM 343
G+ +H + + +++ I + +LI MYA C ++ + VF K W+ +
Sbjct: 337 DGKCLHGWAVRQQVYSD-----IIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAI 391
Query: 344 ICAFAKQGYANEALAIFELMQ 364
I + ++AL +F+ M+
Sbjct: 392 IAGCVQNELVSDALGLFKRMR 412
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 145/334 (43%), Gaps = 46/334 (13%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L C LK L +H + K + L++ Y+ G + A VF ++
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V W MI G+ ++ L M+ PN +T + L+S C + + +G+ +HG
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ Y ++ ++T+LI++Y +C
Sbjct: 344 WAVRQQVYSDIIIETSLISMYA----------------------------------KCKR 369
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
V+ R+F + + W+ +IAG +N AL LF +MRR V+ + +L + L A
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
A L DLR IH Y+ + +G SL L+H+Y+ CG +E A+++F + ++
Sbjct: 430 YAALADLRQAMNIHCYLTK--TGFMSSL--DAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 337 N----ISWTTMICAFAKQGYANEALAIF-ELMQS 365
+ W +I + G + AL +F E+++S
Sbjct: 486 KSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 50 LSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHAR 109
+ Q+H + G + +L +LL +L+ A K+F +N L+N++I+ +
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 110 SESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFM 169
P +S++L+N + P+ T++F+ + A R +H + +G+ + F
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 170 KTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
T LI Y GA + A+RVFDEM +R++ WN+M+ Y R G+++ A +FD M
Sbjct: 120 CTTLITAYAKLGA---LCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 230 RNVVTWTTMIAGYARNGKCRQALILFNKMRRAH-VDLDQVSLVAALSACAELGDLRLGRW 288
+NV +WTT+I+G+++NG +AL +F M + V + +++V+ L ACA LG+L +GR
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI-SWTTMICAF 347
+ Y E +G ++ + NA I MY+ CG+I+ A +F + + N+ SW +MI +
Sbjct: 237 LEGYARE--NGFFDNIYVC--NATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSL 292
Query: 348 AKQGYANEALAIFELM 363
A G +EAL +F M
Sbjct: 293 ATHGKHDEALTLFAQM 308
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 160/384 (41%), Gaps = 77/384 (20%)
Query: 2 LILLFTVHFQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHG 61
LI + VH Q ++L L+ + + S +F S + + L +H+Q G
Sbjct: 53 LIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSG 112
Query: 62 FSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFN 121
F S+ L++ Y G L A +VF E+ V +WN MI G+ R + ++ LF+
Sbjct: 113 FESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFD 172
Query: 122 QM--------------------------------RAAEAEPNLLTYSFLLSGCARSGLLR 149
M + +PN +T +L CA G L
Sbjct: 173 SMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSML 208
G ++ G NG++ N+++ I +Y G ++ A+R+F+E+G +RN+ WNS
Sbjct: 233 IGRRLEGYARENGFFDNIYVCNATIEMYSKCGM---IDVAKRLFEELGNQRNLCSWNS-- 287
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
MI A +GK +AL LF +M R D V
Sbjct: 288 -----------------------------MIGSLATHGKHDEALTLFAQMLREGEKPDAV 318
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEE--KLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+ V L AC G + G+ + +EE K+S K + +I + G ++EAY
Sbjct: 319 TFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY-----GCMIDLLGRVGKLQEAY 373
Query: 327 EVFRWMPKRSN-ISWTTMI--CAF 347
++ + MP + + + W T++ C+F
Sbjct: 374 DLIKTMPMKPDAVVWGTLLGACSF 397
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
R +L ++ R+ + D ++A A+LG L R + +++S + + +
Sbjct: 99 RPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVF----DEMSKRD----VPV 150
Query: 309 NNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
NA+I Y G ++ A E+F MP+++ SWTT+I F++ G +EAL +F M+
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 166/320 (51%), Gaps = 15/320 (4%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
++H V G SY+ L+ Y + G + HKVF E+ V WN +I + +
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 112 SPRKSVILFNQMRAAEAEPNLL----TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
++ +F +M E NL T LS C+ L GE+++ R +V + +V
Sbjct: 127 RFEDAIGVFKRM---SQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSV 182
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
+ L++++ G ++ A+ VFD M ++N+ CW SM+ Y+ G ++ AR +F++
Sbjct: 183 RIGNALVDMFCKCGC---LDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERS 239
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
++VV WT M+ GY + + +AL LF M+ A + D LV+ L+ CA+ G L G+
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
WIH YI E ++ + AL+ MYA CG IE A EVF + +R SWT++I
Sbjct: 300 WIHGYINE----NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGL 355
Query: 348 AKQGYANEALAIFELMQSLG 367
A G + AL ++ M+++G
Sbjct: 356 AMNGMSGRALDLYYEMENVG 375
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 132/270 (48%), Gaps = 38/270 (14%)
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
++ PS+ ++N+M++ A +S K + LF ++R P+ T +L R + EG
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
E+VHG + G + ++ +L+ +Y G +E +VFDEM +R++V WN +++ Y
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGK---IEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
+ G E A +F +M + +++ D+ ++V
Sbjct: 123 VGNGRFEDAIGVFKRMSQ------------------------------ESNLKFDEGTIV 152
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
+ LSAC+ L +L +G I+ ++ + + + + NAL+ M+ CG +++A VF
Sbjct: 153 STLSACSALKNLEIGERIYRFVVTEF-----EMSVRIGNALVDMFCKCGCLDKARAVFDS 207
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFE 361
M ++ WT+M+ + G +EA +FE
Sbjct: 208 MRDKNVKCWTSMVFGYVSTGRIDEARVLFE 237
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 76 YIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
Y+++G + A +F+ V LW M+ G+ + +++ LF M+ A P+
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVL 282
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
LL+GCA++G L +G+ +HG + N + + T L+++Y
Sbjct: 283 VSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYA----------------- 325
Query: 196 MGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILF 255
+CG +E A +F ++ ER+ +WT++I G A NG +AL L+
Sbjct: 326 -----------------KCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLY 368
Query: 256 NKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
+M V LD ++ VA L+AC G + GR I + E+ + + +S S LI +
Sbjct: 369 YEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS---CLIDL 425
Query: 316 YASCGVIEEAYEVFRWMPKRSNISWTTMICAF--AKQGYANEALA 358
G+++EA E+ M S+ + + C+ A + Y N +A
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIA 470
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 175/346 (50%), Gaps = 44/346 (12%)
Query: 22 IPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGH 81
IPAN L LL+ C +LK L QI + +G Q+ + KL+S + G
Sbjct: 31 IPANVYEHPAAL------LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGS 84
Query: 82 LLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSG 141
+ A +VF+ + + L++ M++G A+ K++ F +MR + EP + +++LL
Sbjct: 85 VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKV 144
Query: 142 CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI 201
C LR G+++HG ++ +G+ ++F T L N+Y
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA----------------------- 181
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA 261
+C V AR++FD+M ER++V+W T++AGY++NG R AL + M
Sbjct: 182 -----------KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE 230
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV 321
++ +++V+ L A + L + +G+ IH Y SG L++++ AL+ MYA CG
Sbjct: 231 NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR--SGFDS--LVNISTALVDMYAKCGS 286
Query: 322 IEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+E A ++F M +R+ +SW +MI A+ + EA+ IF+ M G
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 162/330 (49%), Gaps = 41/330 (12%)
Query: 39 HLLQSCKT---LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
+LL+ C L+ +IH +V GFS + + L + Y + A KVF +
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+ WN ++ G++++ R ++ + M +P+ +T +L + L+ G+++H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
G + +G+ V + T L+++Y +CG
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYA----------------------------------KCG 285
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
++E AR++FD M+ERNVV+W +MI Y +N ++A+++F KM V VS++ AL
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
ACA+LGDL GR+IH E ++ +S+ N+LI MY C ++ A +F + R
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRN----VSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQS 365
+ +SW MI FA+ G +AL F M+S
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 153/329 (46%), Gaps = 43/329 (13%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L + L+ +S +IH + GF I L+ Y G L +A ++F + +
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V WN MI + ++E+P++++++F +M +P ++ L CA G L G +H
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH- 360
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCG 215
++ E+G +RN+ NS++++Y +C
Sbjct: 361 ----------------------------------KLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
V+ A +F K+ R +V+W MI G+A+NG+ AL F++MR V D + V+ ++
Sbjct: 387 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
A AEL +WIH + K+ + + AL+ MYA CG I A +F M +R
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKN----VFVTTALVDMYAKCGAIMIARLIFDMMSER 502
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQ 364
+W MI + G+ AL +FE MQ
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQ 531
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 153/331 (46%), Gaps = 52/331 (15%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILA 70
+Q +L+E + ++ + L +C L L + IH V G + ++
Sbjct: 325 FQKMLDEGVKPTDVS--------VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
L+S Y + +A +F ++++ ++ WN MI G A++ P ++ F+QMR+ +P
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+ TY +++ A + + +HG V+ + NVF+ T L+++Y GA + A+
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA---IMIAR 493
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+FD M ER++ WN+ MI GY +G +
Sbjct: 494 LIFDMMSERHVTTWNA-------------------------------MIDGYGTHGFGKA 522
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
AL LF +M++ + + V+ ++ +SAC+ G + G ++E + S+ +S+++
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE-----NYSIELSMDH 577
Query: 311 --ALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
A++ + G + EA++ MP + ++
Sbjct: 578 YGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 177/348 (50%), Gaps = 30/348 (8%)
Query: 39 HLLQSCKTLKYLSQIHTQIVIHG-----FSQKSYILAKLLSFYI--------ASGHLLS- 84
+LL+ C+TLK+L Q H Q + G F Q S + A +L F I AS ++S
Sbjct: 9 YLLKLCRTLKHLHQFHAQFITSGRISNDFKQNS-VFANVL-FAITSISPSASASKEVVSY 66
Query: 85 AHKVFKEVKNPSVTLWNQMIRGHARSE-SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA 143
A VF+ + NPS +N +IR E S S F +MR P+ T+ F+ CA
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 144 --RSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI 201
++G L + +H + L G ++F LI +Y + ++ A ++FDE +R++
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAP---IDSALQLFDENPQRDV 183
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA 261
V +N ++ ++ + AR +FD M R++V+W ++I+GYA+ CR+A+ LF++M
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVAL 243
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS--LNNALIHMYASC 319
+ D V++V+ LSACA+ GD + G+ IH Y + K L I L L+ YA C
Sbjct: 244 GLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRK------RLFIDSFLATGLVDFYAKC 297
Query: 320 GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
G I+ A E+F ++ +W MI A G + F M S G
Sbjct: 298 GFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSG 345
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 134/339 (39%), Gaps = 63/339 (18%)
Query: 2 LILLFTVHFQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHG 61
L L+ T+H Q+ LL +L NT+ L + LQ + ++I G
Sbjct: 133 LTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDG 192
Query: 62 FSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFN 121
+ + ++ A ++F + + WN +I G+A+ R+++ LF+
Sbjct: 193 L--------------VKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFD 238
Query: 122 QMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAG 181
+M A +P+ + LS CA+SG ++G+ +H + + F+ T L++ Y
Sbjct: 239 EMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYA--- 295
Query: 182 ADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAG 241
+CG ++ A IF+ ++ + TW MI G
Sbjct: 296 -------------------------------KCGFIDTAMEIFELCSDKTLFTWNAMITG 324
Query: 242 YARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKS 301
A +G + F KM + + D V+ ++ L C+ G + R + +
Sbjct: 325 LAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRS------ 378
Query: 302 QSLLISLNNALIH------MYASCGVIEEAYEVFRWMPK 334
L +N + H + G+IEEA E+ MPK
Sbjct: 379 ---LYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPK 414
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 59 IHGFSQK------SYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH ++++ S++ L+ FY G + +A ++F+ + ++ WN MI G A +
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK-- 170
+V F +M ++ +P+ +T+ +L GC+ SGL+ E + + + + Y N MK
Sbjct: 331 GELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQ-MRSLYDVNREMKHY 389
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEM----GER-NIVCWNSMLAVYMRCGNVEGARR 222
+ +L G AG +E A + ++M G R ++ W+ +L GN+E A +
Sbjct: 390 GCMADLLGRAGL---IEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEK 443
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 152/318 (47%), Gaps = 42/318 (13%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+H+ +V GF+ + LLS Y SG L AHK+F E+ + SV W + G+ S
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
R+++ LF +M +P+ +LS C G L GE + + N F++T
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
L+NLY +CG +E AR +FD M+E++
Sbjct: 252 TLVNLYA----------------------------------KCGKMEKARSVFDSMVEKD 277
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
+VTW+TMI GYA N ++ + LF +M + ++ DQ S+V LS+CA LG L LG W +
Sbjct: 278 IVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGIS 337
Query: 292 YIEEKLSGKSQSLLISL--NNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAK 349
I+ L +L NALI MYA CG + +EVF+ M ++ + I AK
Sbjct: 338 LIDR------HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAK 391
Query: 350 QGYANEALAIFELMQSLG 367
G+ + A+F + LG
Sbjct: 392 NGHVKLSFAVFGQTEKLG 409
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 156/335 (46%), Gaps = 38/335 (11%)
Query: 26 TITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSA 85
T+ ++ Q + L+ T+ +L QIH ++ H ++++ LL + +
Sbjct: 5 TVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYS 64
Query: 86 HKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARS 145
+ +F + P++ L+N +I G + +++ LF +R + T+ +L C R+
Sbjct: 65 YLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRA 124
Query: 146 GLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWN 205
+ G +H V+ G+ ++
Sbjct: 125 SSRKLGIDLHSLVVKCGF----------------------------------NHDVAAMT 150
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
S+L++Y G + A ++FD++ +R+VVTWT + +GY +G+ R+A+ LF KM V
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
D +V LSAC +GDL G WI Y+EE K+ + L+++YA CG +E+A
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS----FVRTTLVNLYAKCGKMEKA 266
Query: 326 YEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
VF M ++ ++W+TMI +A + E + +F
Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF 301
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 47/307 (15%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRG 106
+KY+ ++ Q + S++ L++ Y G + A VF + + W+ MI+G
Sbjct: 235 VKYMEEMEMQ-------KNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQG 287
Query: 107 HARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPN 166
+A + P++ + LF QM +P+ + LS CA G L GE + + + N
Sbjct: 288 YASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN 347
Query: 167 VFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
+FM LI++Y +CG + +F +
Sbjct: 348 LFMANALIDMYA----------------------------------KCGAMARGFEVFKE 373
Query: 227 MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
M E+++V I+G A+NG + + +F + + + D + + L C G ++ G
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMI- 344
I + K + ++ ++ G++++AY + MP R N I W ++
Sbjct: 434 LRFFNAISCVYALKRT---VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
Query: 345 -CAFAKQ 350
C K
Sbjct: 491 GCRLVKD 497
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 182/349 (52%), Gaps = 13/349 (3%)
Query: 31 RILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSF-YIASGHLLSAHKVF 89
++L Q + ++ + L +L Q+ + +++ G S ++ KLL F + +L A +F
Sbjct: 21 QLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIF 80
Query: 90 KEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR----AAEAEPNLLTYSFLLSGCARS 145
P+ L+ ++ ++ S P + F+ R + PN Y +L
Sbjct: 81 DRFSFPNTHLYAAVLTAYS-SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYL 139
Query: 146 GLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWN 205
VH + +G++ V ++T L++ Y A + + A+++FDEM ERN+V W
Sbjct: 140 SSAFSTPLVHTHLFKSGFHLYVVVQTALLHSY--ASSVSHITLARQLFDEMSERNVVSWT 197
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM-RRAHVD 264
+ML+ Y R G++ A +F+ M ER+V +W ++A +NG +A+ LF +M +
Sbjct: 198 AMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR 257
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
++V++V LSACA+ G L+L + IH + + S + +S N+L+ +Y CG +EE
Sbjct: 258 PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRR--DLSSDVFVS--NSLVDLYGKCGNLEE 313
Query: 325 AYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
A VF+ K+S +W +MI FA G + EA+A+FE M L N+ KP
Sbjct: 314 ASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKP 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLS 74
+M+ E I N +T +L TL+ IH S ++ L+
Sbjct: 249 RMINEPSIRPNEVTVVCVLSA-----CAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303
Query: 75 FYIASGHLLSAHKVFKEVKNPSVTLWNQMIRG---HARSESPRKSVILFNQM---RAAEA 128
Y G+L A VFK S+T WN MI H RSE +++ +F +M +
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSE---EAIAVFEEMMKLNINDI 360
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN--GYYPNVFMKTNLINLYGMAG 181
+P+ +T+ LL+ C GL+ +G + ++ N G P + LI+L G AG
Sbjct: 361 KPDHITFIGLLNACTHGGLVSKGRG-YFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 191/406 (47%), Gaps = 62/406 (15%)
Query: 27 ITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH 86
+++ RI ++ L L C L + Q+H QI+ + +I KL+S A
Sbjct: 13 VSSRRIFEERL-QDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAV 71
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
+VF +V+ P+V L N +IR HA++ P ++ +F++M+ + TY FLL C+
Sbjct: 72 RVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQS 131
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS 206
L + +H + G ++++ LI+ Y G GV A ++F++M ER+ V WNS
Sbjct: 132 WLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGG-LGVRDAMKLFEKMSERDTVSWNS 190
Query: 207 MLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRR------ 260
ML ++ G + ARR+FD+M +R++++W TM+ GYAR + +A LF KM
Sbjct: 191 MLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSW 250
Query: 261 ---------------AHVDLDQVSLVAA--------LSACAELGDLR-LGRWIHTYIEEK 296
A V D++ L A ++ AE G L+ R + +
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 297 -----------LSGKSQSLLISL--------------NNALI-----HMYASCGVIEEAY 326
L+ ++S L+SL +NA + MYA CG +++A+
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
+VF +PK+ +SW TM+ G+ EA+ +F M+ G K
Sbjct: 371 DVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 144/309 (46%), Gaps = 40/309 (12%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-------- 123
+L + +G L A ++F E+ + WN M+ G+AR K+ LF +M
Sbjct: 191 MLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSW 250
Query: 124 --------RAAEAE-------------PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNG 162
+A + E N++T++ +++G A GLL+E +++ +++ +G
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 163 YYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI----VCWNSMLAVYMRCGNVE 218
F +I++ + R+ + N+ N++L +Y +CGN++
Sbjct: 311 LK---FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLK 367
Query: 219 GARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
A +F+ + ++++V+W TM+ G +G ++A+ LF++MRR + D+V+ +A L +C
Sbjct: 368 KAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Query: 279 ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI 338
G + G +E+ Q + L+ + G ++EA +V + MP N+
Sbjct: 428 HAGLIDEGIDYFYSMEKVYDLVPQ---VEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNV 484
Query: 339 S-WTTMICA 346
W ++ A
Sbjct: 485 VIWGALLGA 493
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 37 LFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
+ +L +C LS +IH+ + +Y+L LL Y G+L A VF ++
Sbjct: 318 VISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP 377
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG-E 152
+ WN M+ G ++++ LF++MR P+ +T+ +L C +GL+ EG +
Sbjct: 378 KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID 437
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVY 211
+ V P V L++L G G ++ A +V M E N+V W ++L
Sbjct: 438 YFYSMEKVYDLVPQVEHYGCLVDLLGRVGR---LKEAIKVVQTMPMEPNVVIWGALLGAC 494
Query: 212 MRCGNVEGARRIFDKMME 229
V+ A+ + D +++
Sbjct: 495 RMHNEVDIAKEVLDNLVK 512
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 179/365 (49%), Gaps = 42/365 (11%)
Query: 37 LFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +L++C L+ L QIH QI+I G S + + L++ Y G L A + ++++
Sbjct: 190 LTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR 249
Query: 94 NPS-------------------------------VTLWNQMIRGHARSESPRKSVILFNQ 122
P V LWN MI G+ + ++++LFN+
Sbjct: 250 EPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE 309
Query: 123 MRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA 182
MR E + T + +++ C G L G+Q+H G ++ + + L+++Y G+
Sbjct: 310 MRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGS 368
Query: 183 DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGY 242
A ++F E+ + + NSM+ VY CG ++ A+R+F+++ +++++W +M G+
Sbjct: 369 PM---EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGF 425
Query: 243 ARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQ 302
++NG + L F++M + + D+VSL + +SACA + L LG + + + G
Sbjct: 426 SQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV--FARATIVGLDS 483
Query: 303 SLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFEL 362
++S ++LI +Y CG +E VF M K + W +MI +A G EA+ +F+
Sbjct: 484 DQVVS--SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK 541
Query: 363 MQSLG 367
M G
Sbjct: 542 MSVAG 546
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 159/322 (49%), Gaps = 34/322 (10%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
++S + +G L A ++F + V N ++ G+ + +++ LF ++ + +
Sbjct: 130 VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS---AD 186
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+T + +L CA L+ G+Q+H ++L+ G + M ++L+N+Y G + A
Sbjct: 187 AITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG---DLRMASY 243
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
+ +++ E + +++++ Y CG V +R +FD+ R V+ W +MI+GY N +A
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEA 303
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY------IEE---------- 295
L+LFN+MR + D +L A ++AC LG L G+ +H + I++
Sbjct: 304 LVLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDM 362
Query: 296 -----------KLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMI 344
KL + +S L N++I +Y SCG I++A VF + +S ISW +M
Sbjct: 363 YSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMT 422
Query: 345 CAFAKQGYANEALAIFELMQSL 366
F++ G E L F M L
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKL 444
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 63 SQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQ 122
S + +L ++ Y + G + A +VF+ ++N S+ WN M G +++ +++ F+Q
Sbjct: 381 SYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQ 440
Query: 123 MRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA 182
M + + ++ S ++S CA L GEQV R + G + + ++LI+LY
Sbjct: 441 MHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY----- 495
Query: 183 DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGY 242
+CG VE RR+FD M++ + V W +MI+GY
Sbjct: 496 -----------------------------CKCGFVEHGRRVFDTMVKSDEVPWNSMISGY 526
Query: 243 ARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI-------HTYIEE 295
A NG+ +A+ LF KM A + Q++ + L+AC G + GR + H ++ +
Sbjct: 527 ATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPD 586
Query: 296 KLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQGY 352
K + ++ + A G +EEA + MP + S W++++ GY
Sbjct: 587 K----------EHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGY 634
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 123/259 (47%), Gaps = 42/259 (16%)
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN-LINLYGMAGADFGVEYAQRVF 193
Y LL C+ Q +G +L G+ ++ + N L+ +Y +G G+ A+ +F
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGK-MGI--ARNLF 85
Query: 194 DEMGERNIVCWNSMLAVYM-------------------------------RCGNVEGARR 222
DEM +RN WN+M+ YM + G + ARR
Sbjct: 86 DEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARR 145
Query: 223 IFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD 282
+F+ M E++VVT +++ GY NG +AL LF ++ + D ++L L ACAEL
Sbjct: 146 LFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEA 202
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTT 342
L+ G+ IH I L G + +N++L+++YA CG + A + + + + S +
Sbjct: 203 LKCGKQIHAQI---LIGGVE-CDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSA 258
Query: 343 MICAFAKQGYANEALAIFE 361
+I +A G NE+ +F+
Sbjct: 259 LISGYANCGRVNESRGLFD 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 112/247 (45%), Gaps = 13/247 (5%)
Query: 22 IPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGH 81
+P + ++ S ++ S +L+ Q+ + I G + + L+ Y G
Sbjct: 446 LPTDEVSLSSVISA-----CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGF 500
Query: 82 LLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSG 141
+ +VF + WN MI G+A + +++ LF +M A P +T+ +L+
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTA 560
Query: 142 CARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ER 199
C GL+ EG ++ + V+ G+ P+ + +++L AG VE A + +EM +
Sbjct: 561 CNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGY---VEEAINLVEEMPFDV 617
Query: 200 NIVCWNSMLAVYMRCGNVEGARRIFDKMME---RNVVTWTTMIAGYARNGKCRQALILFN 256
+ W+S+L + G ++ +K++E N V + + A +A +G + ++
Sbjct: 618 DGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRK 677
Query: 257 KMRRAHV 263
MR +V
Sbjct: 678 LMRENNV 684
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 47/342 (13%)
Query: 34 QQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLS---FYIASGHLLSAHKVFK 90
HL L+ S +L QIH ++ + S + LS + + + +VF
Sbjct: 11 DDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFS 70
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP-NLLTYSFLLSGCARSGLLR 149
+ NP+++ N MIR + S++P + LF +R + P N L+ SF L C +SG L
Sbjct: 71 QRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLL 130
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA 209
G Q+HG++ +G+ + + T L++LY
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYST------------------------------ 160
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRR---AHVDLD 266
C N A ++FD++ +R+ V+W + + Y RN + R L+LF+KM+ V D
Sbjct: 161 ----CENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPD 216
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEK-LSGKSQSLLISLNNALIHMYASCGVIEEA 325
V+ + AL ACA LG L G+ +H +I+E LSG ++L+N L+ MY+ CG +++A
Sbjct: 217 GVTCLLALQACANLGALDFGKQVHDFIDENGLSGA-----LNLSNTLVSMYSRCGSMDKA 271
Query: 326 YEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
Y+VF M +R+ +SWT +I A G+ EA+ F M G
Sbjct: 272 YQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 157/358 (43%), Gaps = 53/358 (14%)
Query: 22 IPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGH 81
+PAN +++S L+ ++S L L QIH +I GF S ++ L+ Y +
Sbjct: 109 LPANPLSSSFALKC----CIKSGDLLGGL-QIHGKIFSDGFLSDSLLMTTLMDLYSTCEN 163
Query: 82 LLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR---AAEAEPNLLTYSFL 138
A KVF E+ WN + + R++ R ++LF++M+ +P+ +T
Sbjct: 164 STDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLA 223
Query: 139 LSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGE 198
L CA G L G+QVH + NG + + L+++Y G+ ++ A +VF M E
Sbjct: 224 LQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGS---MDKAYQVFYGMRE 280
Query: 199 RNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM 258
RN+V +WT +I+G A NG ++A+ FN+M
Sbjct: 281 RNVV-------------------------------SWTALISGLAMNGFGKEAIEAFNEM 309
Query: 259 RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN----NALIH 314
+ + ++ +L LSAC+ G + G + + SG+ + I N ++
Sbjct: 310 LKFGISPEEQTLTGLLSACSHSGLVAEGMM---FFDRMRSGEFK---IKPNLHHYGCVVD 363
Query: 315 MYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQGYANEALAIFELMQSLGANEA 371
+ ++++AY + + M + + + W T++ A G + + L A EA
Sbjct: 364 LLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEA 421
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 168/334 (50%), Gaps = 42/334 (12%)
Query: 35 QHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIAS---GHLLSAHKVFKE 91
Q+ L+ C +L+ L QI + S++ AKL++F S + A +F+
Sbjct: 30 QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEA 88
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
+ P + ++N M RG++R +P + LF ++ P+ T+ LL CA + L EG
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
Q+H + G NV++ LIN+Y
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMY---------------------------------- 174
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
C +V+ AR +FD+++E VV + MI GYAR + +AL LF +M+ ++ ++++L+
Sbjct: 175 TECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
+ LS+CA LG L LG+WIH Y ++ K + +N ALI M+A CG +++A +F
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCK----YVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
M + +W+ MI A+A G A +++ +FE M+S
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 150/342 (43%), Gaps = 53/342 (15%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LL++C K L Q+H + G Y+ L++ Y + SA VF + P
Sbjct: 135 LLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC 194
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V +N MI G+AR P +++ LF +M+ +PN +T +LS CA G L G+ +H
Sbjct: 195 VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHK 254
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ + V + T LI+++ G+ ++ A +F++M ++ W++M+ Y G
Sbjct: 255 YAKKHSFCKYVKVNTALIDMFAKCGS---LDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
E +++++F +MR +V D+++ + L+A
Sbjct: 312 AE-------------------------------KSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
C+ G + GR Y + +S I +++ + + G +E+AYE +P
Sbjct: 341 CSHTGRVEEGR---KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP--- 394
Query: 337 NISWTTM---ICAFAKQGYANEALA------IFELMQSLGAN 369
IS T M I A + N LA IFEL S G +
Sbjct: 395 -ISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGD 435
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +L SC L L IH H F + + L+ + G L A +F++++
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
W+ MI +A KS+++F +MR+ +P+ +T+ LL+ C+ +G + EG +
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK 352
Query: 154 VHGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVY 211
+++ G P++ ++++L AG +E A D++ + W +LA
Sbjct: 353 YFSQMVSKFGIVPSIKHYGSMVDLLSRAG---NLEDAYEFIDKLPISPTPMLWRILLAAC 409
Query: 212 MRCGNVEGARRIFDKMMERNVV---TWTTMIAGYARNGK 247
N++ A ++ +++ E + + + YARN K
Sbjct: 410 SSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 448
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 177/354 (50%), Gaps = 43/354 (12%)
Query: 17 LLEELIPANTITTSRILQQH--LFHLLQSCKTLKYLSQIHTQIVIHGFSQKS---YILAK 71
L + PA++ + S H +F L ++C + L Q+H + + ++ ++ K
Sbjct: 29 LSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGK 88
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRK-SVILFNQM-RAAEAE 129
+L + + A +VF ++N S +WN +IR A S ++ + +L+ +M E+
Sbjct: 89 ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS 148
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
P+ T+ F+L CA EG+QVH +++ +G+ +V++ LI+LYG G ++ A
Sbjct: 149 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC---LDLA 205
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
++VFDEM ER++V WNSM+ +R G +
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFGEYD------------------------------- 234
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
AL LF +M+R+ + D ++ + LSACA LG L LG W H ++ K ++ + +
Sbjct: 235 SALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCD-VDVAMDVLVK 292
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
N+LI MY CG + A +VF+ M KR SW MI FA G A EA+ F+ M
Sbjct: 293 NSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 44/330 (13%)
Query: 34 QQHLFH-LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVF 89
+H F +L++C + S Q+H QIV HGF Y+ L+ Y + G L A KVF
Sbjct: 150 DKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVF 209
Query: 90 KEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLR 149
E+ S+ WN MI R ++ LF +M+ + EP+ T +LS CA G L
Sbjct: 210 DEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLS 268
Query: 150 EGEQVHGRVLVNGYYP---NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS 206
G H +L +V +K +LI +Y G+ + A++VF M +R++ WN+
Sbjct: 269 LGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS---LRMAEQVFQGMQKRDLASWNA 325
Query: 207 MLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
M+ + G E A FD+M++ +R +V +
Sbjct: 326 MILGFATHGRAEEAMNFFDRMVD-----------------------------KRENVRPN 356
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
V+ V L AC G + GR Y + + + ++ + A G I EA
Sbjct: 357 SVTFVGLLIACNHRGFVNKGR---QYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAI 413
Query: 327 EVFRWMPKRSN-ISWTTMICAFAKQGYANE 355
++ MP + + + W +++ A K+G + E
Sbjct: 414 DMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARN-GKCRQALILFNKM-RRAHVDLDQVSLVAA 273
+V A R+FD + + W T+I A + + +A +L+ KM R D+ +
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
L ACA + G+ +H I + G + +NN LIH+Y SCG ++ A +VF MP
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGD----VYVNNGLIHLYGSCGCLDLARKVFDEMP 213
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQ 364
+RS +SW +MI A + G + AL +F MQ
Sbjct: 214 ERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 166/332 (50%), Gaps = 42/332 (12%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIAS--GHLLSAHKVFKEVK-NPS 96
+LQ C ++K L +IH+ ++I+G I LL F S G L A +F +PS
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMR-AAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+ WN +IRG + S SP S++ +N+M ++ + P+L T++F L C R + + ++H
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
G V+ +G+ + + T+L+ Y G+ VE A +VFDEM R++V WN
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGS---VEIASKVFDEMPVRDLVSWN---------- 177
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
MI ++ G QAL ++ +M V D +LVA LS
Sbjct: 178 ---------------------VMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLS 216
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
+CA + L +G +H I + +S + ++NALI MYA CG +E A VF M KR
Sbjct: 217 SCAHVSALNMGVMLHR-IACDIRCES---CVFVSNALIDMYAKCGSLENAIGVFNGMRKR 272
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++W +MI + G+ EA++ F M + G
Sbjct: 273 DVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 40/275 (14%)
Query: 18 LEELIPANTITTSRILQQHLFHL---LQSCKTLKYLS---QIHTQIVIHGFSQKSYILAK 71
L ++ N + S + + LF L+SC+ +K + +IH ++ GF + +
Sbjct: 88 LNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATS 147
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L+ Y A+G + A KVF E+ + WN MI + +++ ++ +M +
Sbjct: 148 LVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGD 207
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
T LLS CA L G +H +
Sbjct: 208 SYTLVALLSSCAHVSALNMGVMLH----------------------------------RI 233
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
D E + N+++ +Y +CG++E A +F+ M +R+V+TW +MI GY +G +A
Sbjct: 234 ACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEA 293
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
+ F KM + V + ++ + L C+ G ++ G
Sbjct: 294 ISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEG 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQK------SYILAKLLSFYIASGHLLSAHKVFK 90
L LL SC ++S ++ +++H + ++ L+ Y G L +A VF
Sbjct: 211 LVALLSSCA---HVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE 150
++ V WN MI G+ +++ F +M A+ PN +T+ LL GC+ GL++E
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKE 327
Query: 151 GEQVHGRVLVNGYY--PNVFMKTNLINLYGMAG 181
G + H ++ + ++ PNV +++LYG AG
Sbjct: 328 GVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAG 359
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 151/311 (48%), Gaps = 38/311 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H+ + G + +I L+ Y G + A K+F E+ WN MI G++ +
Sbjct: 150 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 209
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
+ ++ LF +M EP+ T +L C+ G LR G + + + F+ +
Sbjct: 210 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 269
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
LI++YG +CG+++ ARR+F++M++++
Sbjct: 270 LISMYG----------------------------------KCGDLDSARRVFNQMIKKDR 295
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
V WT MI Y++NGK +A LF +M + V D +L LSAC +G L LG+ I T+
Sbjct: 296 VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH 355
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGY 352
E LS + I + L+ MY CG +EEA VF MP ++ +W MI A+A QG+
Sbjct: 356 ASE-LSLQHN---IYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGH 411
Query: 353 ANEALAIFELM 363
A EAL +F+ M
Sbjct: 412 AKEALLLFDRM 422
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 167/338 (49%), Gaps = 43/338 (12%)
Query: 33 LQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV 92
L++ LL+ C ++ L QI Q+++H + ++++ K + G + +F
Sbjct: 32 LERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVT 87
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVI-LFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
+ P+ +N MIRG + + ++ + L+ +M+ + +P+ TY+F+ CA+ + G
Sbjct: 88 EEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVG 147
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
VH + G ER++ +S++ +Y
Sbjct: 148 RSVHSSLFKVGL----------------------------------ERDVHINHSLIMMY 173
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
+CG V AR++FD++ ER+ V+W +MI+GY+ G + A+ LF KM + D+ +LV
Sbjct: 174 AKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLV 233
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
+ L AC+ LGDLR GR +EE K L L + LI MY CG ++ A VF
Sbjct: 234 SMLGACSHLGDLRTGR----LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 289
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
M K+ ++WT MI +++ G ++EA +F M+ G +
Sbjct: 290 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 327
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 66 SYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRA 125
+++ +KL+S Y G L SA +VF ++ W MI ++++ ++ LF +M
Sbjct: 264 TFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 323
Query: 126 AEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG 185
P+ T S +LS C G L G+Q+ N+++ T L+++YG G
Sbjct: 324 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGR--- 380
Query: 186 VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARN 245
VE A RVF+ M +N WN+M+ Y A
Sbjct: 381 VEEALRVFEAMPVKNEATWNAMITAY-------------------------------AHQ 409
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG-RWIHTYIEEKLSGKSQSL 304
G ++AL+LF++M V ++ + LSAC G + G R+ H E S
Sbjct: 410 GHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFH----EMSSMFGLVP 462
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
I +I + + G+++EA+E P + +
Sbjct: 463 KIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPD 495
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L +C ++ L QI T Y+ L+ Y G + A +VF+ + +
Sbjct: 336 VLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKN 395
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG-EQVH 155
WN MI +A +++++LF++M P+ +T+ +LS C +GL+ +G H
Sbjct: 396 EATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFH 452
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGA-DFGVEYAQR 191
+ G P + TN+I+L AG D E+ +R
Sbjct: 453 EMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMER 489
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 179/360 (49%), Gaps = 40/360 (11%)
Query: 36 HLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
+L +++ C T K L ++ +Q ++ + ++ + L A +++ P
Sbjct: 30 NLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEP 89
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+V ++N + +G P +S+ L+ +M P+ TYS L+ A S R GE +
Sbjct: 90 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK--ASSFASRFGESLQ 147
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRC- 214
+ G+ +V ++T LI+ Y G + A++VFDEM ER+ + W +M++ Y R
Sbjct: 148 AHIWKFGFGFHVKIQTTLIDFYSATGR---IREARKVFDEMPERDDIAWTTMVSAYRRVL 204
Query: 215 ------------------------------GNVEGARRIFDKMMERNVVTWTTMIAGYAR 244
GN+E A +F++M +++++WTTMI GY++
Sbjct: 205 DMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQ 264
Query: 245 NGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSL 304
N + R+A+ +F KM + D+V++ +SACA LG L +G+ +H Y + L
Sbjct: 265 NKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ----NGFVL 320
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
+ + +AL+ MY+ CG +E A VF +PK++ W ++I A G+A EAL +F M+
Sbjct: 321 DVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME 380
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 133/274 (48%), Gaps = 38/274 (13%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L++ Y+ G+L A +F ++ + W MI+G+++++ R+++ +F +M P+
Sbjct: 227 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 286
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+T S ++S CA G+L G++VH L NG+ +V++ + L+++Y G+ +E A
Sbjct: 287 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS---LERALL 343
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
VF + ++N+ CWNS +I G A +G ++A
Sbjct: 344 VFFNLPKKNLFCWNS-------------------------------IIEGLAAHGFAQEA 372
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
L +F KM V + V+ V+ +AC G + GR I+ + + S S +
Sbjct: 373 LKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSN---VEHYGG 429
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMI 344
++H+++ G+I EA E+ M N + W ++
Sbjct: 430 MVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 463
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 139/324 (42%), Gaps = 30/324 (9%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILA 70
Y+M+ E +IP + +T S ++ +C L L ++H + +GF YI +
Sbjct: 276 YKMMEEGIIP-DEVTMSTVIS--------ACAHLGVLEIGKEVHMYTLQNGFVLDVYIGS 326
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
L+ Y G L A VF + ++ WN +I G A ++++ +F +M +P
Sbjct: 327 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 386
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY--YPNVFMKTNLINLYGMAGADFGVEY 188
N +T+ + + C +GL+ EG +++ R +++ Y NV +++L+ AG + E
Sbjct: 387 NAVTFVSVFTACTHAGLVDEGRRIY-RSMIDDYSIVSNVEHYGGMVHLFSKAGLIY--EA 443
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM---ERNVVTWTTMIAGYARN 245
+ + + E N V W ++L N+ A F+K+M N + +++ YA
Sbjct: 444 LELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQ 503
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
+ R + +MR ++ C +R+ + H + S + +
Sbjct: 504 NRWRDVAEIRGRMRELGIE----------KICPGTSSIRIDKRDHLFAAADKSHSASDEV 553
Query: 306 ISLNNALIHMYASCGVIEEAYEVF 329
L + + G ++E V+
Sbjct: 554 CLLLDEIYDQMGLAGYVQETENVY 577
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 176/347 (50%), Gaps = 15/347 (4%)
Query: 31 RILQQHLFHLLQSCK---TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHK 87
R + +L+SC L+ L Q+H +V +G+S + ++ Y + A +
Sbjct: 159 RATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARR 218
Query: 88 VFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGL 147
VF E+ NPS WN ++R + ++V++F +M P T S ++ C+RS
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 148 LREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSM 207
L G+ +H + + + T++ ++Y +E A+RVFD+ +++ W S
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR---LESARRVFDQTRSKDLKSWTSA 335
Query: 208 LAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
++ Y G AR +FD M ERN+V+W M+ GY + +AL MR+ ++D
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 268 VSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYE 327
V+LV L+ C+ + D+++G+ H +I G +++++ NAL+ MY CG ++ A
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRH--GYDTNVIVA--NALLDMYGKCGTLQSANI 451
Query: 328 VFRWMPK-RSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
FR M + R +SW ++ A+ G + +AL+ FE MQ EAKP
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQV----EAKP 494
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 37/328 (11%)
Query: 58 VIHGFSQKSYILAK------LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
VIH + K ++A + Y+ L SA +VF + ++ + W + G+A S
Sbjct: 284 VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSG 343
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARS----------GLLR-EGEQVHGRVLV 160
R++ LF+ M E N+++++ +L G + L+R E E + LV
Sbjct: 344 LTREARELFDLM----PERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLV 399
Query: 161 NGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGA 220
+ NV G++ G + ++ + N++ N++L +Y +CG ++ A
Sbjct: 400 --WILNV--------CSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSA 449
Query: 221 RRIFDKMME-RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
F +M E R+ V+W ++ G AR G+ QAL F M+ + +L L+ CA
Sbjct: 450 NIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCAN 508
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
+ L LG+ IH + L + + + A++ MY+ C + A EVF+ R I
Sbjct: 509 IPALNLGKAIHGF----LIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLIL 564
Query: 340 WTTMICAFAKQGYANEALAIFELMQSLG 367
W ++I + G + E +F L+++ G
Sbjct: 565 WNSIIRGCCRNGRSKEVFELFMLLENEG 592
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
N + Y +CG V+ AR +F++M ER+ +W +I A+NG + +F +M R V
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 265 LDQVSLVAALSACAELGDLRLGRWIH-TYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
+ S L +C + DLRL R +H ++ SG + L +++ +Y C V+
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN-----VDLETSIVDVYGKCRVMS 214
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSL 366
+A VF + S++SW ++ + + G+ +EA+ +F M L
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLEL 257
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL-WNQMIRGHARS 110
Q H I HG+ + LL Y G L SA+ F+++ + WN ++ G AR
Sbjct: 416 QAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARV 475
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
+++ F M+ EA+P+ T + LL+GCA L G+ +HG ++ +GY +V ++
Sbjct: 476 GRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR 534
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
++++Y +C + A +F + R
Sbjct: 535 GAMVDMYS----------------------------------KCRCFDYAIEVFKEAATR 560
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
+++ W ++I G RNG+ ++ LF + V D V+ + L AC G + LG
Sbjct: 561 DLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYF 620
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
+ + K Q + + +I +Y G + + E MP
Sbjct: 621 SSMSTKYHISPQ---VEHYDCMIELYCKYGCLHQLEEFLLLMP 660
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 141/327 (43%), Gaps = 41/327 (12%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L +SC + + Q + + +V ++L + + Y G + A ++F+E+
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
WN +I A++ + +F +M +++ +L C LR Q+H
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC 186
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
V+ GY NV ++T+++++YG + A+RVFDE+ + V WN ++ Y+ G
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRV---MSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+ A +F KM+E NV ++ + + A
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVS-------------------------------SVMLA 272
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
C+ L +G+ IH I KLS + ++ ++ ++ MY C +E A VF +
Sbjct: 273 CSRSLALEVGKVIHA-IAVKLSVVADTV---VSTSVFDMYVKCDRLESARRVFDQTRSKD 328
Query: 337 NISWTTMICAFAKQGYANEALAIFELM 363
SWT+ + +A G EA +F+LM
Sbjct: 329 LKSWTSAMSGYAMSGLTREARELFDLM 355
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 38/312 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H I+ GF +++ + L++FY+ + + SA KVF E+ V WN +I G+ +
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
K + +F QM + E +L T + +GCA S L+ G VH
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS--------------- 320
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
GV+ + C N++L +Y +CG+++ A+ +F +M +R+
Sbjct: 321 ------------IGVKAC------FSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VV++T+MIAGYAR G +A+ LF +M + D ++ A L+ CA L G+ +H
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+I+E G I ++NAL+ MYA CG ++EA VF M + ISW T+I ++K
Sbjct: 422 WIKENDLG----FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 352 YANEALAIFELM 363
YANEAL++F L+
Sbjct: 478 YANEALSLFNLL 489
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 170/339 (50%), Gaps = 41/339 (12%)
Query: 32 ILQQHLFHLLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKV 88
I + L +LQ C K+LK ++ I +GF S + +KL Y G L A +V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLL 148
F EVK WN ++ A+S S+ LF +M ++ E + T+S + + +
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 149 REGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
GEQ+HG +L +G+ GERN V NS++
Sbjct: 212 HGGEQLHGFILKSGF---------------------------------GERNSV-GNSLV 237
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
A Y++ V+ AR++FD+M ER+V++W ++I GY NG + L +F +M + +++D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 297
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
++V+ + CA+ + LGR +H+ + + N L+ MY+ CG ++ A V
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC----NTLLDMYSKCGDLDSAKAV 353
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
FR M RS +S+T+MI +A++G A EA+ +FE M+ G
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 154/316 (48%), Gaps = 39/316 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H+ V FS++ LL Y G L SA VF+E+ + SV + MI G+AR
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
++V LF +M P++ T + +L+ CAR LL EG++VH ++K N
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-----------WIKEN 426
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
D G FD I N+++ +Y +CG+++ A +F +M +++
Sbjct: 427 ----------DLG-------FD------IFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 233 VTWTTMIAGYARNGKCRQALILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
++W T+I GY++N +AL LFN + D+ ++ L ACA L GR IH
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
YI + + N+L+ MYA CG + A+ +F + + +SWT MI + G
Sbjct: 524 YIMRNGYFSDRHVA----NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 352 YANEALAIFELMQSLG 367
+ EA+A+F M+ G
Sbjct: 580 FGKEAIALFNQMRQAG 595
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 146/338 (43%), Gaps = 50/338 (14%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILA 70
++ + EE I + T + +L C + L + +H I + ++
Sbjct: 385 FEEMEEEGISPDVYTVTAVLN--------CCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAE 129
L+ Y G + A VF E++ + WN +I G++++ +++ LFN +
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
P+ T + +L CA +G ++HG ++ NGY+ + + +L+++Y GA + A
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA---LLLA 553
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
+FD++ +++V W MIAGY +G +
Sbjct: 554 HMLFDDIASKDLVSWTV-------------------------------MIAGYGMHGFGK 582
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
+A+ LFN+MR+A ++ D++S V+ L AC+ G + G + + + +
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT---VEHY 639
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICA 346
++ M A G + +AY MP + + W ++C
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 176/351 (50%), Gaps = 20/351 (5%)
Query: 35 QHLFHLLQSCKTLKYL---SQIHTQIVIHGFSQ--KSYILAKLLSFYIASGHLLSAHKVF 89
Q + LL+ C +L ++H + G + +SY+ L FY +SG +++A K+F
Sbjct: 7 QKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLF 66
Query: 90 KEVK--NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGL 147
E+ W ++ +R S+ LF +MR E + ++ L CA+
Sbjct: 67 DEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLED 126
Query: 148 LREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSM 207
L +Q HG + G +V + L+++YG G V +R+F+E+ E+++V W +
Sbjct: 127 LGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGL---VSEVKRIFEELEEKSVVSWTVV 183
Query: 208 LAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM--RRAHVDL 265
L ++ +E R +F +M ERN V WT M+AGY G R+ L L +M R H L
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH-GL 242
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYI--EEKLSGKSQSL-LISLNNALIHMYASCGVI 322
+ V+L + LSACA+ G+L +GRW+H Y +E + G+ S + + AL+ MYA CG I
Sbjct: 243 NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI 302
Query: 323 EEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
+ + VFR M KR+ ++W + A G + +F M E KP
Sbjct: 303 DSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM----IREVKP 349
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LF + + L + Q H V G + L+ Y G + ++F+E++ S
Sbjct: 117 LFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKS 176
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG-EQVH 155
V W ++ + E + +F++M E N + ++ +++G +G RE E +
Sbjct: 177 VVSWTVVLDTVVKWEGLERGREVFHEM----PERNAVAWTVMVAGYLGAGFTREVLELLA 232
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAG----ADFGVEYAQRVFDEMGER----NIVCWNSM 207
V G+ N ++++ +G + YA + MGE +++ ++
Sbjct: 233 EMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTAL 292
Query: 208 LAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
+ +Y +CGN++ + +F M +RNVVTW + +G A +GK R + +F +M R V D
Sbjct: 293 VDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDD 351
Query: 268 VSLVAALSACAELGDLRLG-RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
++ A LSAC+ G + G R H+ L K + ++ + G+IEEA
Sbjct: 352 LTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPK-----VDHYACMVDLLGRAGLIEEAE 406
Query: 327 EVFRWMPKRSN 337
+ R MP N
Sbjct: 407 ILMREMPVPPN 417
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L+ Y G++ S+ VF+ ++ +V WN + G A R + +F QM E +P+
Sbjct: 292 LVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPD 350
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
LT++ +LS C+ SG++ EG + + G P V +++L G AG +E A+
Sbjct: 351 DLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGL---IEEAEI 407
Query: 192 VFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
+ EM N V S+L G VE A RI ++++
Sbjct: 408 LMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQ 446
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 160/298 (53%), Gaps = 27/298 (9%)
Query: 81 HLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLS 140
L +A K F + SV WN M+ G+A++ ++ LFN M PN T+ ++S
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272
Query: 141 GC---ARSGLLREGEQV--HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
C A L R ++ RV +N F+KT L++++ ++ A+R+F+E
Sbjct: 273 ACSFRADPSLTRSLVKLIDEKRVRLN-----CFVKTALLDMHAKCR---DIQSARRIFNE 324
Query: 196 MG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALIL 254
+G +RN+V WN+M++ Y R G++ AR++FD M +RNVV+W ++IAGYA NG+ A+
Sbjct: 325 LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEF 384
Query: 255 FNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN--- 310
F M D+V++++ LSAC + DL LG I YI K+Q I LN+
Sbjct: 385 FEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIR-----KNQ---IKLNDSGY 436
Query: 311 -ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+LI MYA G + EA VF M +R +S+ T+ AFA G E L + M+ G
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEG 494
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 180/402 (44%), Gaps = 65/402 (16%)
Query: 30 SRILQQHLFHLLQSCKTLKYLSQIHTQ-IVIHGFSQKSYILAKLLSFYIA-SGHLLSAHK 87
SR L L + T L+QIH Q IV + ++SY ++++S
Sbjct: 2 SRELTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRL 61
Query: 88 VFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGL 147
+F V P+V + N M + ++ + + L+ Q P+ ++ ++ R G+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 148 LREGEQVHGRVLVNGYYPNVFMKTNLINLY-----------------GMAGADFGV---- 186
L V G++ + +++ ++++Y G+D+ V
Sbjct: 122 L-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 187 -------EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMI 239
E A ++FD M E ++V W M+ + + ++E AR+ FD+M E++VV+W M+
Sbjct: 177 YWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAML 236
Query: 240 AGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEK--- 296
+GYA+NG AL LFN M R V ++ + V +SAC+ D L R + I+EK
Sbjct: 237 SGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVR 296
Query: 297 LSGKSQSLLISLN-------------------------NALIHMYASCGVIEEAYEVFRW 331
L+ ++ L+ ++ NA+I Y G + A ++F
Sbjct: 297 LNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDT 356
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
MPKR+ +SW ++I +A G A A+ FE M G ++KP
Sbjct: 357 MPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG--DSKP 396
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 18 LEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYI 77
L +LI + + ++ L + C+ ++ +I ++ G + ++S Y
Sbjct: 286 LVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYT 342
Query: 78 ASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYS 136
G + SA ++F + +V WN +I G+A + ++ F M +++P+ +T
Sbjct: 343 RIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMI 402
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
+LS C L G+ + +++ N I L
Sbjct: 403 SVLSACGHMADLELGDCIVD-----------YIRKNQIKL-------------------- 431
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
N + S++ +Y R GN+ A+R+FD+M ER+VV++ T+ +A NG + L L +
Sbjct: 432 ---NDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLS 488
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLS 298
KM+ ++ D+V+ + L+AC G L+ G+ I I L+
Sbjct: 489 KMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLA 530
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 192/392 (48%), Gaps = 70/392 (17%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQ-KSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVT 98
L + CK+ +L+QIH +I+ G Q ++ I + S +S L + VF+ V +P
Sbjct: 16 LFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTY 75
Query: 99 LWNQMIRGHARSESPRKSV-ILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
LWN +I+G++ ++V IL MR A P+ T+ ++ C+ +G +R G VHG
Sbjct: 76 LWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGL 135
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
VL G+ +V + T+ ++ YG F A++VF EM ERN V W +++ Y++ G +
Sbjct: 136 VLRIGFDKDVVVGTSFVDFYGKCKDLFS---ARKVFGEMPERNAVSWTALVVAYVKSGEL 192
Query: 218 E-------------------------------GARRIFDKMMERNVVTWTTMIAGYAR-- 244
E A+++FD+M +R+++++T+MI GYA+
Sbjct: 193 EEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGG 252
Query: 245 -----------------------------NGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
NG+ +A +F++M +V D+ +V +S
Sbjct: 253 DMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMS 312
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
AC+++G L + +Y+ ++++ S ++ ALI M A CG ++ A ++F MP+R
Sbjct: 313 ACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP---ALIDMNAKCGHMDRAAKLFEEMPQR 369
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+S+ +M+ A G +EA+ +FE M G
Sbjct: 370 DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG 401
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
++ Y G ++SA +F+E + V W+ +I G+A++ P ++ +F++M A +P+
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 303
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
L+S C++ G E+V Y +
Sbjct: 304 EFIMVGLMSACSQMGCFELCEKVDS-------------------------------YLHQ 332
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
++ +V +++ + +CG+++ A ++F++M +R++V++ +M+ G A +G +A
Sbjct: 333 RMNKFSSHYVV--PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN-- 309
+ LF KM + D+V+ L C G RL Y E L K S+L S +
Sbjct: 391 IRLFEKMVDEGIVPDEVAFTVILKVC---GQSRLVEEGLRYFE--LMRKKYSILASPDHY 445
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMI--CAFAKQGYANEALA--IFEL-M 363
+ ++++ + G ++EAYE+ + MP ++ S W +++ C+ E +A +FEL
Sbjct: 446 SCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEP 505
Query: 364 QSLGA 368
QS G+
Sbjct: 506 QSAGS 510
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 155/307 (50%), Gaps = 10/307 (3%)
Query: 63 SQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQ 122
S+ LL Y+ + +A VF E+ WN MI GHA + LF +
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 123 MRAAEAEPNLLTYSFLLSGC-ARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAG 181
M +E +P+ T+S L++ C A S + G VH +L NG+ V K ++++ Y G
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 182 ADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAG 241
+ + A R + + V WNS++ M+ G E A +F E+N+VTWTTMI G
Sbjct: 255 SR---DDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITG 311
Query: 242 YARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH-TYIEEKLSGK 300
Y RNG QAL F +M ++ VD D + A L AC+ L L G+ IH I G
Sbjct: 312 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY 371
Query: 301 SQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
+ + NAL+++YA CG I+EA F + + +SW TM+ AF G A++AL ++
Sbjct: 372 AY-----VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLY 426
Query: 361 ELMQSLG 367
+ M + G
Sbjct: 427 DNMIASG 433
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 155/318 (48%), Gaps = 34/318 (10%)
Query: 79 SGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFL 138
SG + SA +VF + WN M+ ++R ++++ LF Q+R ++A+P+ +++ +
Sbjct: 17 SGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAI 76
Query: 139 LSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM-- 196
LS CA G ++ G ++ V+ +G+ ++ + +LI++YG A +VF +M
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS---ANKVFRDMCC 133
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
RN V W S+L YM E A +F +M +R W MI+G+A GK L LF
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 257 KMRRAHVDLDQVSLVAALSAC-AELGDLRLGRWIH---------TYIEEKLS-------- 298
+M + D + + ++AC A+ ++ GR +H + +E K S
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 299 GKSQSLLISLN----------NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFA 348
G + L N++I G E+A EVF P+++ ++WTTMI +
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 349 KQGYANEALAIF-ELMQS 365
+ G +AL F E+M+S
Sbjct: 314 RNGDGEQALRFFVEMMKS 331
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
S +A + G + AR++FD M E + V W TM+ Y+R G ++A+ LF ++R +
Sbjct: 9 SKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKP 68
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
D S A LS CA LG+++ GR I + + SG SL + NN+LI MY C A
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRKIQSLVIR--SGFCASLPV--NNSLIDMYGKCSDTLSA 124
Query: 326 YEVFRWM--PKRSNISWTTMICAFAKQGYANEALAIF 360
+VFR M R+ ++W +++ A+ AL +F
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVF 161
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 42/272 (15%)
Query: 80 GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
G A +VF ++ W MI G+ R+ +++ F +M + + + Y +L
Sbjct: 285 GETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVL 344
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
C+ LL G+ +HG ++ G+ ++ L+NL
Sbjct: 345 HACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNL----------------------- 381
Query: 200 NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR 259
Y +CG+++ A R F + +++V+W TM+ + +G QAL L++ M
Sbjct: 382 -----------YAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Query: 260 RAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASC 319
+ + D V+ + L+ C+ G + G I E + L + +I M+
Sbjct: 431 ASGIKPDNVTFIGLLTTCSHSGLVEEGCMI---FESMVKDYRIPLEVDHVTCMIDMFGRG 487
Query: 320 GVIEEAYEVFRW-----MPKRSNISWTTMICA 346
G + EA ++ +N SW T++ A
Sbjct: 488 GHLAEAKDLATTYSSLVTDSSNNSSWETLLGA 519
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L +C L L IH ++ GF +Y+ L++ Y G + A + F ++ N
Sbjct: 343 VLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ WN M+ +++ L++ M A+ +P+ +T+ LL+ C+ SGL+ EG +
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 157 RVLVNGYYP-NVFMKTNLINLYGMAG-----ADFGVEYAQRVFDEMGERNIVCWNSMLA 209
++ + P V T +I+++G G D Y+ V D N W ++L
Sbjct: 463 SMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTD---SSNNSSWETLLG 518
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 164/329 (49%), Gaps = 45/329 (13%)
Query: 41 LQSCKTLKYLS---QIHTQIV-IHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L++C L+ L +IH Q+V + F + +L LL Y G + SAHKVF ++ +
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFD--NVVLTGLLDMYAKCGEIKSAHKVFNDITLRN 206
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V W MI G+ +++ + ++LFN+MR N TY L+ C + L +G+ HG
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
++ +G + + + L+ S+L +Y++CG+
Sbjct: 267 CLVKSG----IELSSCLVT------------------------------SLLDMYVKCGD 292
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+ ARR+F++ ++V WT MI GY NG +AL LF KM+ + + V++ + LS
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG 352
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
C + +L LGR +H LS K ++ NAL+HMYA C +A VF ++
Sbjct: 353 CGLIENLELGRSVH-----GLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKD 407
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQS 365
++W ++I F++ G +EAL +F M S
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNS 436
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 159/327 (48%), Gaps = 40/327 (12%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L+ +C L L Q H +V G S ++ LL Y+ G + +A +VF E +
Sbjct: 248 LIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVD 307
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ +W MI G+ + S +++ LF +M+ E +PN +T + +LSGC L G VHG
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ G + TN+ N +++ +Y +C
Sbjct: 368 LSIKVGIW-----DTNVAN------------------------------ALVHMYAKCYQ 392
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
A+ +F+ E+++V W ++I+G+++NG +AL LF++M V + V++ + SA
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSA 452
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
CA LG L +G +H Y KL G S + + AL+ YA CG + A +F + +++
Sbjct: 453 CASLGSLAVGSSLHAY-SVKL-GFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 337 NISWTTMICAFAKQGYANEALAIFELM 363
I+W+ MI + KQG +L +FE M
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEM 537
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 149/336 (44%), Gaps = 42/336 (12%)
Query: 38 FHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
F LL C + L Q H + +G I KL+S Y G+ A VF ++ P
Sbjct: 48 FLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
LW M+R + ++ + V L++ + + + +S L C L G+++H +
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
++ + NV + +L +Y +CG +
Sbjct: 168 LVKVPSFDNVVL-----------------------------------TGLLDMYAKCGEI 192
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
+ A ++F+ + RNVV WT+MIAGY +N C + L+LFN+MR +V ++ + + AC
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
+L L G+W H + + S L+ S L+ MY CG I A VF
Sbjct: 253 TKLSALHQGKWFHGCLVKSGIELSSCLVTS----LLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
+ WT MI + G NEAL++F+ M+ + E KP
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGV---EIKP 341
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 40/285 (14%)
Query: 59 IHGFSQK-----SYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESP 113
+HG S K + + L+ Y A VF+ + WN +I G +++ S
Sbjct: 365 VHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 424
Query: 114 RKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNL 173
+++ LF++M + PN +T + L S CA G L G +H + G F+ ++
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG-----FLASSS 479
Query: 174 INLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVV 233
+++ G A DF Y +CG+ + AR IFD + E+N +
Sbjct: 480 VHV-GTALLDF--------------------------YAKCGDPQSARLIFDTIEEKNTI 512
Query: 234 TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYI 293
TW+ MI GY + G +L LF +M + ++ + + LSAC G + G+ Y
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK---KYF 569
Query: 294 EEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI 338
+ + ++ M A G +E+A ++ MP + ++
Sbjct: 570 SSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 114/244 (46%), Gaps = 10/244 (4%)
Query: 24 ANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGF--SQKSYILAKLLSFYIASGH 81
+ ++T + + LF S +L S +H V GF S ++ LL FY G
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 82 LLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSG 141
SA +F ++ + W+ MI G+ + S+ LF +M + +PN T++ +LS
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 142 CARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ER 199
C +G++ EG++ + + + P+ T ++++ AG +E A + ++M +
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGE---LEQALDIIEKMPIQP 612
Query: 200 NIVCWNSMLAVYMRCGNVEGARRIFDKMME--RNVVTWTTMIAG-YARNGKCRQALILFN 256
++ C+ + L + + KM++ + ++ +++ YA +G+ QA + N
Sbjct: 613 DVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRN 672
Query: 257 KMRR 260
M++
Sbjct: 673 LMKQ 676
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 171/330 (51%), Gaps = 40/330 (12%)
Query: 40 LLQSCKTLK-YLSQIHTQIVIHG-FSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
LQS LK +++QIH ++ G S I L++ G + A KVF E+ V
Sbjct: 22 FLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGV 81
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
+++N MI ++R ++P + + L++QM A + +P+ T++ + C +L +GE V +
Sbjct: 82 SVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCK 141
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
+ GY +VF+ ++++NL YM+CG +
Sbjct: 142 AVDFGYKNDVFVCSSVLNL----------------------------------YMKCGKM 167
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
+ A +F KM +R+V+ WTTM+ G+A+ GK +A+ + +M+ D+V ++ L A
Sbjct: 168 DEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQAS 227
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
+LGD ++GR +H Y+ +G ++++ +L+ MYA G IE A VF M ++
Sbjct: 228 GDLGDTKMGRSVHGYLYR--TGLPMNVVV--ETSLVDMYAKVGFIEVASRVFSRMMFKTA 283
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+SW ++I FA+ G AN+A MQSLG
Sbjct: 284 VSWGSLISGFAQNGLANKAFEAVVEMQSLG 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 125/297 (42%), Gaps = 43/297 (14%)
Query: 37 LFHLLQSCKTL---KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
+ LLQ+ L K +H + G + L+ Y G + A +VF +
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+ W +I G A++ K+ +M++ +P+L+T +L C++ G L+ G
Sbjct: 280 FKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRL 339
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
VH +L + V D V +++ +Y +
Sbjct: 340 VHCYIL-----------------------------KRHVLDR------VTATALMDMYSK 364
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
CG + +R IF+ + +++V W TMI+ Y +G ++ + LF KM ++++ D + +
Sbjct: 365 CGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASL 424
Query: 274 LSACAELGDLRLGR-WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
LSA + G + G+ W I + S+ + LI + A G +EEA ++
Sbjct: 425 LSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYV----CLIDLLARAGRVEEALDMI 477
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 180/347 (51%), Gaps = 20/347 (5%)
Query: 37 LFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L ++L C +L S Q+H V Q ++ L+ Y G + A+ VF +
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
V WN M+ G+++ +V LF +M+ + + +++T+S +SG A+ GL E
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGA--------DFGVEYAQRVF-DEMGERNIVCW 204
V ++L +G PN ++++ GA + ++Y + + G+ N+V
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI- 410
Query: 205 NSMLAVYMRCGNVEGARRIFDKM--MERNVVTWTTMIAGYARNGKCRQALILFNKM--RR 260
N ++ +Y +C V+ AR +FD + ER+VVTWT MI GY+++G +AL L ++M
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 261 AHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCG 320
+ ++ AL ACA L LR+G+ IH Y L + ++ + ++N LI MYA CG
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAY---ALRNQQNAVPLFVSNCLIDMYAKCG 527
Query: 321 VIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
I +A VF M ++ ++WT+++ + GY EAL IF+ M+ +G
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 169/322 (52%), Gaps = 17/322 (5%)
Query: 54 HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESP 113
H ++ GF ++ L++ Y L A KVF E+ V WN +I +A+ P
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 114 RKSVILFNQMRAA-EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
+ ++ +F++M P+ +T +L CA G G+Q+H + + N+F+
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER-- 230
L+++Y G ++ A VF M +++V WN+M+A Y + G E A R+F+KM E
Sbjct: 270 LVDMYAKCGM---MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 231 --NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
+VVTW+ I+GYA+ G +AL + +M + + ++V+L++ LS CA +G L G+
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 289 IHTY-----IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM-PK-RSNISWT 341
IH Y I+ + +G ++ N LI MYA C ++ A +F + PK R ++WT
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVI--NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 342 TMICAFAKQGYANEALAIFELM 363
MI +++ G AN+AL + M
Sbjct: 445 VMIGGYSQHGDANKALELLSEM 466
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 167/361 (46%), Gaps = 51/361 (14%)
Query: 16 MLLEELIPANTITTSRILQQHLFH---------LLQSCKTLKYLSQIHTQIVIHGFSQKS 66
M+ LIP + + ++ LF + CKT+ + IH +++ G +
Sbjct: 1 MIRRLLIPNAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLN 60
Query: 67 YILAKLLSFYIASGHLLSAHKVFKEVK--NPSVTLWNQMIRGHARSESPRKSVILFNQMR 124
+ + L+S YI+ G L A + + + V WN +IR + + K + LF M
Sbjct: 61 -LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMH 119
Query: 125 AAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADF 184
+ P+ T+ F+ C +R GE H LV G+ NVF+
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG-------------- 165
Query: 185 GVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYAR 244
N+++A+Y RC ++ AR++FD+M +VV+W ++I YA+
Sbjct: 166 --------------------NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 245 NGKCRQALILFNKMRRAH-VDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
GK + AL +F++M D ++LV L CA LG LG+ +H + S Q+
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF--AVTSEMIQN 263
Query: 304 LLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+ + N L+ MYA CG+++EA VF M + +SW M+ +++ G +A+ +FE M
Sbjct: 264 MFV--GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 364 Q 364
Q
Sbjct: 322 Q 322
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 41/247 (16%)
Query: 44 CKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV--KNPSVTLWN 101
C +KY + +G ++ ++ +L+ Y + +A +F + K V W
Sbjct: 389 CYAIKYPIDLRK----NGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 102 QMIRGHARSESPRKSVILFNQM--RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
MI G+++ K++ L ++M + PN T S L CA LR G+Q+H L
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
N + N + L+ N ++ +Y +CG++
Sbjct: 505 RN--------QQNAVPLF-------------------------VSNCLIDMYAKCGSISD 531
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
AR +FD MM +N VTWT+++ GY +G +AL +F++MRR LD V+L+ L AC+
Sbjct: 532 ARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSH 591
Query: 280 LGDLRLG 286
G + G
Sbjct: 592 SGMIDQG 598
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 169/331 (51%), Gaps = 45/331 (13%)
Query: 42 QSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYI----ASGHLLSAHKVFKEVKNPSV 97
Q C T+K + H+ +IHG + +Y ++KLL+ ++ + H A +F ++ P+
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAE---PNLLTYSFLLSGCARSGLLREGEQV 154
+++ MIR +RS P + F M E E P+ LT+ FL+ C ++ G+Q+
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 155 HGRVLVNGYY-PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
H V+ NG + + ++T ++ +Y VE + +FD
Sbjct: 139 HCWVVKNGVFLSDGHVQTGVLRIY--------VE-DKLLFD------------------- 170
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
AR++FD++ + +VV W ++ GY R G + L +F +M ++ D+ S+ A
Sbjct: 171 ------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTA 224
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
L+ACA++G L G+WIH ++++K +S + + AL+ MYA CG IE A EVF +
Sbjct: 225 LTACAQVGALAQGKWIHEFVKKKRWIESD---VFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQ 364
+R+ SW +I +A GYA +A + ++
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 135/307 (43%), Gaps = 48/307 (15%)
Query: 38 FH-LLQSCKTLKYLS---QIHTQIVIHG-FSQKSYILAKLLSFYIASGHLLSAHKVFKEV 92
FH L+ +C + S QIH +V +G F ++ +L Y+ L A KVF E+
Sbjct: 119 FHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEI 178
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
P V W+ ++ G+ R + + +F +M EP+ + + L+ CA+ G L +G+
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGK 238
Query: 153 QVHGRVLVNGYY-PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+H V + +VF+ T L+++Y G +E A VF+++ RN+ W
Sbjct: 239 WIHEFVKKKRWIESDVFVGTALVDMYAKCGC---IETAVEVFEKLTRRNVFSW------- 288
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAH-VDLDQVSL 270
+I GYA G ++A +++ R + D V L
Sbjct: 289 ------------------------AALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVL 324
Query: 271 VAALSACAELGDLRLGRWIHTYIEEK--LSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ L+ACA G L GR + +E + ++ K + + ++ + G +++A ++
Sbjct: 325 LGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHY-----SCIVDLMCRAGRLDDALDL 379
Query: 329 FRWMPKR 335
MP +
Sbjct: 380 IEKMPMK 386
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 173/354 (48%), Gaps = 54/354 (15%)
Query: 16 MLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKL 72
ML +L+P +T T LL++C +L+ LS IH Q++++GFS YI + L
Sbjct: 37 MLANKLLP-DTFTFPS--------LLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 73 LSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
++ Y G L A KVF+E++ V W MI ++R+ ++ L N+MR +P
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
+T +LSG V T L L+ DF V Y
Sbjct: 148 VTLLEMLSG-------------------------VLEITQLQCLH-----DFAVIYG--- 174
Query: 193 FDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQAL 252
FD +I NSML +Y +C +V A+ +FD+M +R++V+W TMI+GYA G + L
Sbjct: 175 FD----CDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEIL 230
Query: 253 ILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
L +MR + DQ + A+LS + DL +GR +H I + + + L AL
Sbjct: 231 KLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVK----TGFDVDMHLKTAL 286
Query: 313 IHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF-ELMQS 365
I MY CG E +Y V +P + + WT MI + G A +AL +F E++QS
Sbjct: 287 ITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQS 340
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 152/309 (49%), Gaps = 39/309 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H QIV GF ++ L++ Y+ G ++++V + + N V W MI G R
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
K++I+F++M + ++ + + +++ CA+ G G VHG VL +GY
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGY--------- 377
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
+ NS++ +Y +CG+++ + IF++M ER++
Sbjct: 378 -------------------------TLDTPALNSLITMYAKCGHLDKSLVIFERMNERDL 412
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVD-LDQVSLVAALSACAELGDLRLGRWIHT 291
V+W +I+GYA+N +AL+LF +M+ V +D ++V+ L AC+ G L +G+ IH
Sbjct: 413 VSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHC 472
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+ + SL+ + AL+ MY+ CG +E A F + + +SW +I + G
Sbjct: 473 IVIRSFI-RPCSLV---DTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHG 528
Query: 352 YANEALAIF 360
+ AL I+
Sbjct: 529 KGDIALEIY 537
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 152/328 (46%), Gaps = 38/328 (11%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L +L + L +H VI+GF ++ +L+ Y H+ A +F +++
Sbjct: 150 LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRD 209
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ WN MI G+A + + + L +MR P+ T+ LS L G +H
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+++ G+ ++ +KT LI +Y G + E + RV + + +++VCW M++ MR G
Sbjct: 270 QIVKTGFDVDMHLKTALITMYLKCGKE---EASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
E +ALI+F++M ++ DL ++ + +++
Sbjct: 327 AE-------------------------------KALIVFSEMLQSGSDLSSEAIASVVAS 355
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
CA+LG LG +H Y+ +L N+LI MYA CG ++++ +F M +R
Sbjct: 356 CAQLGSFDLGASVHGYVLR----HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERD 411
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQ 364
+SW +I +A+ +AL +FE M+
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMK 439
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 42/262 (16%)
Query: 107 HARSESPRKSVI-LFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP 165
H S K V+ F+ M A + P+ T+ LL CA L G +H +VLVNG+
Sbjct: 20 HLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSS 79
Query: 166 NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFD 225
+ ++ ++L+NLY A FG+ + AR++F+
Sbjct: 80 DFYISSSLVNLY----AKFGL------------------------------LAHARKVFE 105
Query: 226 KMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRL 285
+M ER+VV WT MI Y+R G +A L N+MR + V+L+ LS E+ L+
Sbjct: 106 EMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC 165
Query: 286 GRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMIC 345
+H + + G I++ N+++++Y C + +A ++F M +R +SW TMI
Sbjct: 166 ---LHDF--AVIYGFDCD--IAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMIS 218
Query: 346 AFAKQGYANEALAIFELMQSLG 367
+A G +E L + M+ G
Sbjct: 219 GYASVGNMSEILKLLYRMRGDG 240
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%), Gaps = 8/215 (3%)
Query: 51 SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
+ +H ++ HG++ + L L++ Y GHL + +F+ + + WN +I G+A++
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN 425
Query: 111 ESPRKSVILFNQMRAAEAEP-NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFM 169
K+++LF +M+ + + T LL C+ +G L G+ +H V+ + P +
Sbjct: 426 VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLV 485
Query: 170 KTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM-- 227
T L+++Y G +E AQR FD + +++V W ++A Y G + A I+ +
Sbjct: 486 DTALVDMYSKCGY---LEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLH 542
Query: 228 --MERNVVTWTTMIAGYARNGKCRQALILFNKMRR 260
ME N V + +++ + NG +Q L +F+ M R
Sbjct: 543 SGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 166/331 (50%), Gaps = 45/331 (13%)
Query: 36 HLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
+L +L+ CK + L Q+H +++ G + +L++ Y + +F V++P
Sbjct: 7 NLLLMLRECKNFRCLLQVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRVIFDSVRDP 62
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEA-EPNLLTYSFLLSGCARSGLLREGEQV 154
V LWN MIRG+ R+ R+++ F M + +P+ +++F L CA S ++G ++
Sbjct: 63 GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRI 122
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRC 214
H + G +V++ T L+ +Y A R++V
Sbjct: 123 HDLIAEMGLESDVYIGTALVEMYCKA------------------RDLV------------ 152
Query: 215 GNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
AR++FDKM ++VVTW TM++G A+NG AL+LF+ MR VD+D VSL +
Sbjct: 153 ----SARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLI 208
Query: 275 SACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK 334
A ++L + R +H + +K + + ++ LI MY +C + A VF + +
Sbjct: 209 PAVSKLEKSDVCRCLHGLVIKK------GFIFAFSSGLIDMYCNCADLYAAESVFEEVWR 262
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELMQS 365
+ SW TM+ A+A G+ E L +F+LM++
Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRN 293
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 150/314 (47%), Gaps = 44/314 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+IH I G YI L+ Y + L+SA +VF ++ V WN M+ G A++
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF-MK 170
+++LF+ MR+ + + ++ L+ ++ +HG V+ G+ +F
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFS 237
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
+ LI++Y C ++ A +F+++ +
Sbjct: 238 SGLIDMY----------------------------------CNCADLYAAESVFEEVWRK 263
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
+ +W TM+A YA NG + L LF+ MR V +++V+ +AL A A +GDL G IH
Sbjct: 264 DESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIH 323
Query: 291 TY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAK 349
Y +++ L G +S+ +L+ MY+ CG +E A ++F + R +SW+ MI ++ +
Sbjct: 324 DYAVQQGLIGD-----VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 350 QGYANEALAIFELM 363
G +EA+++F M
Sbjct: 379 AGQHDEAISLFRDM 392
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 156/346 (45%), Gaps = 57/346 (16%)
Query: 37 LFHLLQSC----------KTLKYLSQIHTQIV---IHGFS-QKSYILA---KLLSFYIAS 79
LFH ++SC + +S++ V +HG +K +I A L+ Y
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNC 247
Query: 80 GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
L +A VF+EV + W M+ +A + + + LF+ MR + N + + L
Sbjct: 248 ADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASAL 307
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
A G L +G +H + G +V + T+L+++Y
Sbjct: 308 QAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYS--------------------- 346
Query: 200 NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR 259
+CG +E A ++F + +R+VV+W+ MIA Y + G+ +A+ LF M
Sbjct: 347 -------------KCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 260 RAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYAS 318
R H+ + V+L + L CA + RLG+ IH Y I+ + + ++ A+I MYA
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA-----TAVISMYAK 448
Query: 319 CGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
CG A + F +P + +++ + + + G AN+A +++ M+
Sbjct: 449 CGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 145/322 (45%), Gaps = 48/322 (14%)
Query: 59 IHGFSQKSYILAKL------LSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH ++ K+ I ++L +S Y G A K F+ + +N + +G+ +
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
K+ ++ M+ P+ T +L CA G V+G+++ +G+ +
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHA 542
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM-MERN 231
LIN++ +C + A +FDK E++
Sbjct: 543 LINMF----------------------------------TKCDALAAAIVLFDKCGFEKS 568
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
V+W M+ GY +G+ +A+ F +M+ + V+ V + A AEL LR+G +H+
Sbjct: 569 TVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHS 628
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+ + SQ+ + N+L+ MYA CG+IE + + F + + +SW TM+ A+A G
Sbjct: 629 SLIQ-CGFCSQT---PVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHG 684
Query: 352 YANEALAIFELMQSLGANEAKP 373
A+ A+++F MQ NE KP
Sbjct: 685 LASCAVSLFLSMQE---NELKP 703
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 143/337 (42%), Gaps = 45/337 (13%)
Query: 10 FQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYIL 69
F M L + P ++ T +LQ F C S ++ QI+ HGF + ++
Sbjct: 487 FDVYKNMKLHGVCP-DSRTMVGMLQTCAF-----CSDYARGSCVYGQIIKHGFDSECHVA 540
Query: 70 AKLLSFYIASGHLLSAHKVFKEVK-NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA 128
L++ + L +A +F + S WN M+ G+ ++V F QM+ +
Sbjct: 541 HALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKF 600
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
+PN +T+ ++ A LR G VH ++ G+ + +L+++Y G +E
Sbjct: 601 QPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGM---IES 657
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
+++ F E+ + IV WN+ML + YA +G
Sbjct: 658 SEKCFIEISNKYIVSWNTML-------------------------------SAYAAHGLA 686
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
A+ LF M+ + D VS ++ LSAC G + G+ I + E+ +++ +
Sbjct: 687 SCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAE---VEH 743
Query: 309 NNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMI 344
++ + G+ EA E+ R M ++++ W ++
Sbjct: 744 YACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 151/313 (48%), Gaps = 46/313 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H+QI GF Y+ ++ Y G + A F E+ + S W +I G+ R
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG 158
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+ LF+QM + +++ Y+ ++ G +SG +
Sbjct: 159 ELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTS--------------------- 194
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
A+R+FDEM + ++ W +M+ Y +++ AR++FD M ERN
Sbjct: 195 -----------------ARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMR-RAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
+V+W TMI GY +N + ++ + LF +M+ +D D V++++ L A ++ G L LG W H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
+++ K K + + A++ MY+ CG IE+A +F MP++ SW MI +A
Sbjct: 298 CFVQRKKLDKK----VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALN 353
Query: 351 GYANEALAIFELM 363
G A AL +F M
Sbjct: 354 GNARAALDLFVTM 366
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 140/326 (42%), Gaps = 66/326 (20%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
Y +++ + + +T++R L + H KT+ I +IHG+ I A
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTH-----KTV-----ITWTTMIHGYCNIKDIDA--- 225
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA-EPNL 132
A K+F + ++ WN MI G+ +++ P++ + LF +M+A + +P+
Sbjct: 226 -----------ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDD 274
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
+T +L + +G L GE H V V + T ++++Y G +E A+R+
Sbjct: 275 VTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE---IEKAKRI 331
Query: 193 FDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQAL 252
FDEM E+ + WN+M I GYA NG R AL
Sbjct: 332 FDEMPEKQVASWNAM-------------------------------IHGYALNGNARAAL 360
Query: 253 ILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR-WIHTYIEEKLSGKSQSLLISLNNA 311
LF M D+++++A ++AC G + GR W H E L+ K I
Sbjct: 361 DLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAK-----IEHYGC 414
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSN 337
++ + G ++EA ++ MP N
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPFEPN 440
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 47/308 (15%)
Query: 60 HGFSQKSYILAKLLSFYIASGHLLSAHKVFKE-VKNPSVTLWNQMIRGHARSESPRKSVI 118
H I K L ++ + A K+F + + L N MI+ + + S
Sbjct: 4 HAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFA 63
Query: 119 LFNQMRAAEA-EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLY 177
L+ +R P+ T++ L C+ S + +G Q+H ++ G+ ++++ T ++++Y
Sbjct: 64 LYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 178 GMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTT 237
A FG +MG C AR FD+M R+ V+WT
Sbjct: 124 ----AKFG---------KMG----------------C-----ARNAFDEMPHRSEVSWTA 149
Query: 238 MIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKL 297
+I+GY R G+ A LF++M HV D V A + + GD+ R + + K
Sbjct: 150 LISGYIRCGELDLASKLFDQM--PHVK-DVVIYNAMMDGFVKSGDMTSARRLFDEMTHK- 205
Query: 298 SGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEAL 357
+ +IH Y + I+ A ++F MP+R+ +SW TMI + + E +
Sbjct: 206 -------TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGI 258
Query: 358 AIFELMQS 365
+F+ MQ+
Sbjct: 259 RLFQEMQA 266
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 165/297 (55%), Gaps = 9/297 (3%)
Query: 72 LLSFYIASGHLLSAHKVFKEVK-NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
+++ Y+ +G+ ++ + + N + +N MI G+ ++++ + +M ++ E
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+ TY ++ CA +GLL+ G+QVH VL + F +L++LY G + A+
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGK---FDEAR 340
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+F++M +++V WN++L+ Y+ G++ A+ IF +M E+N+++W MI+G A NG +
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
L LF+ M+R + + A+ +CA LG G+ H + + G SL S N
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK--IGFDSSL--SAGN 456
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
ALI MYA CGV+EEA +VFR MP ++SW +I A + G+ EA+ ++E M G
Sbjct: 457 ALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 160/357 (44%), Gaps = 45/357 (12%)
Query: 46 TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIR 105
+L+ +H I+ GF +++IL +L+ Y S L A ++F E+ P M+
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP 165
G+ S + +F +A + + Y+ +++G + + + ++ G+ P
Sbjct: 89 GYCASGDITLARGVFE--KAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 166 NVFMKTNLINLYGMAGADFG--VEYAQRVFDEMGERNIVCWNSMLAVYMRCGN----VEG 219
+ F +++ + D V++ N++++VY +C + +
Sbjct: 147 DNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKC------------------------------- 248
AR++FD+++E++ +WTTM+ GY +NG
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 249 -RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
++AL + +M + ++LD+ + + + ACA G L+LG+ +H Y+ + +
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-----EDFSFH 321
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
+N+L+ +Y CG +EA +F MP + +SW ++ + G+ EA IF+ M+
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 113/217 (52%), Gaps = 5/217 (2%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L+S Y G A +F+++ + WN ++ G+ S ++ ++F +M+ E N
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK----EKN 381
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADF-GVEYAQ 190
+L++ ++SG A +G EG ++ + G+ P + + I + GA G +Y
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
++ + ++ N+++ +Y +CG VE AR++F M + V+W +IA ++G +
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
A+ ++ +M + + D+++L+ L+AC+ G + GR
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 175/341 (51%), Gaps = 12/341 (3%)
Query: 32 ILQQHLFHLLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKV 88
+L H H LQ C +TL +H IV G Q + L++ Y G A +V
Sbjct: 1 MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA-EPNLLTYSFLLSGCARSGL 147
F E+ + W ++ ++ K++ +F+ + ++ P+ +S L+ CA G
Sbjct: 61 FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120
Query: 148 LREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSM 207
+ G QVH +V+ Y + +K++L+++Y G + A+ VFD + +N + W +M
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGL---LNSAKAVFDSIRVKNTISWTAM 177
Query: 208 LAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD-LD 266
++ Y + G E A +F + +N+ +WT +I+G+ ++GK +A +F +MRR VD LD
Sbjct: 178 VSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILD 237
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+ L + + ACA L GR +H + G + IS NALI MYA C + A
Sbjct: 238 PLVLSSIVGACANLAASIAGRQVHGLV--IALGFDSCVFIS--NALIDMYAKCSDVIAAK 293
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++F M R +SWT++I A+ G A +ALA+++ M S G
Sbjct: 294 DIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 157/336 (46%), Gaps = 21/336 (6%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L+++C L + Q+H ++ ++ + + L+ Y G L SA VF ++ +
Sbjct: 111 LVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKN 170
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
W M+ G+A+S +++ LF + NL +++ L+SG +SG E V
Sbjct: 171 TISWTAMVSGYAKSGRKEEALELFRILPVK----NLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 157 ---RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYM 212
R V+ P V ++++ A + +G + + N+++ +Y
Sbjct: 227 EMRRERVDILDPLVL--SSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYA 284
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
+C +V A+ IF +M R+VV+WT++I G A++G+ +AL L++ M V ++V+ V
Sbjct: 285 KCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVG 344
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN--ALIHMYASCGVIEEAYEVFR 330
+ AC+ +G + GR + + K + SL + L+ + G+++EA +
Sbjct: 345 LIYACSHVGFVEKGRELFQSMT-----KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 331 WMP-KRSNISWTTMICAFAKQGYANEALAIFELMQS 365
MP +W ++ A +QG + I + + S
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 435
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 171/320 (53%), Gaps = 32/320 (10%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
LLS Y+ + + A +FK +N ++ WN ++ G + + ++ F+ M +
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD---- 249
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGR----------VLVNGYYPNVFMKT---------- 171
+++++ +++G A+SG + E Q+ +V+GY N ++
Sbjct: 250 VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 172 -NLINLYGM-AGADFG--VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
N ++ M AG G +E A+ +FD M RN+ WN+M+ Y +CG + A+ +FDKM
Sbjct: 310 RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM 369
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
+R+ V+W MIAGY+++G +AL LF +M R L++ S +ALS CA++ L LG+
Sbjct: 370 PKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGK 429
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
+H + + G ++ + NAL+ MY CG IEEA ++F+ M + +SW TMI +
Sbjct: 430 QLHGRL---VKGGYETGCF-VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 348 AKQGYANEALAIFELMQSLG 367
++ G+ AL FE M+ G
Sbjct: 486 SRHGFGEVALRFFESMKREG 505
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 161/322 (50%), Gaps = 42/322 (13%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
++S Y+ +G A K+F E+ + WN MI+G+ R+ + K+ LF M E +
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERD 156
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRV----------LVNGYYPNVFMKT---------- 171
+ +++ +LSG A++G + + V R+ L++ Y N M+
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 172 -NLIN----LYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
L++ L G VE A++ FD M R++V WN+++ Y + G ++ AR++FD+
Sbjct: 217 WALVSWNCLLGGFVKKKKIVE-ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 227 MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
++V TWT M++GY +N +A LF+KM + ++VS A L+ + + +
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMA 331
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICA 346
+ + + + +S N +I YA CG I EA +F MPKR +SW MI
Sbjct: 332 KELFDVMPCR--------NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 347 FAKQGYANEALAIFELMQSLGA 368
+++ G++ EAL +F M+ G
Sbjct: 384 YSQSGHSFEALRLFVQMEREGG 405
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 42/278 (15%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
+++ Y G + A +F ++ W MI G+++S +++ LF QM N
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
++S LS CA L G+Q+HGR++ GY F+
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG--------------------- 447
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
N++L +Y +CG++E A +F +M +++V+W TMIAGY+R+G A
Sbjct: 448 -------------NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR-WIHTYIEE-KLSGKSQSLLISLN 309
L F M+R + D ++VA LSAC+ G + GR + +T ++ + SQ
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYA---- 550
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICA 346
++ + G++E+A+ + + MP + + W T++ A
Sbjct: 551 -CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
A RVF M + V +N M++ Y+R G E AR++FD+M ER++V+W MI GY RN
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNL 142
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEK------------ 296
+A LF M + D S LS A+ G + R + + EK
Sbjct: 143 GKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAY 198
Query: 297 ------------LSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMI 344
+ L+S N L+ + I EA + F M R +SW T+I
Sbjct: 199 VQNSKMEEACMLFKSRENWALVSW-NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTII 257
Query: 345 CAFAKQGYANEALAIFE 361
+A+ G +EA +F+
Sbjct: 258 TGYAQSGKIDEARQLFD 274
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
G+ +I WN ++ YMR G A R+F +M + V++ MI+GY RNG+ A LF+
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL-------ISLN 309
+M + D VS I Y+ + GK++ L +
Sbjct: 120 EM----PERDLVSWNVM---------------IKGYVRNRNLGKARELFEIMPERDVCSW 160
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFE 361
N ++ YA G +++A VF MP+++++SW ++ A+ + EA +F+
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 8/222 (3%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRG 106
L+ Q+H ++V G+ ++ LL Y G + A+ +FKE+ + WN MI G
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484
Query: 107 HARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN-GYYP 165
++R ++ F M+ +P+ T +LS C+ +GL+ +G Q + + G P
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544
Query: 166 NVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIF 224
N +++L G AG +E A + M E + W ++L GN E A
Sbjct: 545 NSQHYACMVDLLGRAGL---LEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 601
Query: 225 DK---MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
DK M N + + YA +G+ L +MR V
Sbjct: 602 DKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 39/315 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q H IV G ++ L+S Y +SG A ++F ++ V W MI G R+
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP-NVFMK 170
S ++++ F +M+ N +T +L + +R G VHG L G +VF+
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
++L+++YG +C + A+++FD+M R
Sbjct: 244 SSLVDMYG----------------------------------KCSCYDDAQKVFDEMPSR 269
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
NVVTWT +IAGY ++ + +++F +M ++ V ++ +L + LSACA +G L GR +H
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
Y+ + S + + LI +Y CG +EEA VF + +++ +WT MI FA
Sbjct: 330 CYMIK----NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAH 385
Query: 351 GYANEALAIFELMQS 365
GYA +A +F M S
Sbjct: 386 GYARDAFDLFYTMLS 400
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 38/279 (13%)
Query: 67 YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAA 126
+I + L+ Y A KVF E+ + +V W +I G+ +S K +++F +M +
Sbjct: 241 FIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS 300
Query: 127 EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
+ PN T S +LS CA G L G +VH ++ N N T LI+LY
Sbjct: 301 DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLY--------- 351
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNG 246
++CG +E A +F+++ E+NV TWT MI G+A +G
Sbjct: 352 -------------------------VKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
R A LF M +HV ++V+ +A LSACA G + GR + ++ + + + ++
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKA--- 443
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMI 344
++ ++ G++EEA + MP + +N+ W +
Sbjct: 444 DHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 16 MLLEELIPANTITTSRILQQHLFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKL 72
++ EE++ ++ + L +L +C + L ++H ++ + + L
Sbjct: 292 LVFEEMLKSDVAPNEKTLSS----VLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTL 347
Query: 73 LSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
+ Y+ G L A VF+ + +V W MI G A R + LF M ++ PN
Sbjct: 348 IDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNE 407
Query: 133 LTYSFLLSGCARSGLLREGEQV----HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
+T+ +LS CA GL+ EG ++ GR + P +++L+G G +E
Sbjct: 408 VTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME---PKADHYACMVDLFGRKGL---LEE 461
Query: 189 AQRVFDEMG-ERNIVCWNSMLA 209
A+ + + M E V W ++
Sbjct: 462 AKALIERMPMEPTNVVWGALFG 483
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 186/374 (49%), Gaps = 53/374 (14%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L++C+ L HTQ++ G + +++ +LL+ Y +G + A+ +F E+ +
Sbjct: 164 ILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRN 223
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSG--------------- 141
WN MI+G ++ +V +F M+ E +P+ +T++ +LS
Sbjct: 224 RMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFH 283
Query: 142 --------------------CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAG 181
CA L E+VHG V+ G+ + + LI++YG G
Sbjct: 284 LMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQG 343
Query: 182 ADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME--------RNVV 233
V+ A+ +F ++ + I WNS++ ++ G ++ A +F ++ E NVV
Sbjct: 344 K---VKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 234 TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYI 293
TWT++I G G+ +L F +M+ + V + V++ LS CAEL L LGR IH ++
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHV 460
Query: 294 EEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYA 353
+ S+++L+ NAL++MYA CG++ E VF + + ISW ++I + G+A
Sbjct: 461 IR--TSMSENILV--QNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFA 516
Query: 354 NEALAIFELMQSLG 367
+AL++F+ M S G
Sbjct: 517 EKALSMFDRMISSG 530
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 168/352 (47%), Gaps = 21/352 (5%)
Query: 26 TITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYIL-AKLLSFYIASGHLLS 84
T + L + HLL C T + Q+H Q+++ F +S L A L+S Y G LL
Sbjct: 48 TSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLD 107
Query: 85 AHKVFKEVK---NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSG 141
A VF+ V + LWN +++ + ++ L+ MR + +L
Sbjct: 108 ARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRA 167
Query: 142 C---ARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGE 198
C R GL R H +V+ G N+ + L+ LY AG + A +F EM
Sbjct: 168 CRYLGRFGLCR---AFHTQVIQIGLKENLHVVNELLTLYPKAGR---MGDAYNLFVEMPV 221
Query: 199 RNIVCWNSMLAVYMRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALIL 254
RN + WN M+ + + + E A +IF+ M + + VTWT++++ +++ GK L
Sbjct: 222 RNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKY 281
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
F+ MR + + +L S CAEL L + +H Y+ + G + L S NALIH
Sbjct: 282 FHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYV---IKGGFEEYLPS-RNALIH 337
Query: 315 MYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSL 366
+Y G +++A +FR + + SW ++I +F G +EAL++F ++ +
Sbjct: 338 VYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEM 389
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 143/303 (47%), Gaps = 11/303 (3%)
Query: 44 CKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLW 100
C L+ LS ++H ++ GF + L+ Y G + A +F++++N + W
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
Query: 101 NQMIRGHARSESPRKSVILFNQMR----AAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
N +I + +++ LF+++ + N++T++ ++ GC G + +
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 157 RVLVNGYYPNVFMKTNLINLYG-MAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
++ + N ++++ + + G E V NI+ N+++ +Y +CG
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCG 483
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
+ +F+ + ++++++W ++I GY +G +AL +F++M + D ++LVA LS
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLS 543
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
AC+ G + GR I + ++ + Q + ++ + G ++EA E+ + MP
Sbjct: 544 ACSHAGLVEKGREIFYSMSKRFGLEPQQEHYA---CIVDLLGRVGFLKEASEIVKNMPME 600
Query: 336 SNI 338
+
Sbjct: 601 PKV 603
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 181/405 (44%), Gaps = 84/405 (20%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK--N 94
L +L KTL + Q+H +++IHGF + + + L + YI S L A F +
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 95 PSVTLWNQMIRGHARSESPRKS--VILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
+ WN ++ G+++S++ S ++L+N+MR + F + C GLL G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
+HG + NG + ++ +L+ +Y G +E AQ+VFDE+ RN V W ++ Y+
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGT---MESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 213 R--------------------------------CGNVEGAR------------------- 221
+ CGNV +
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 222 -------------RIFD---KMMERNV----VTWTTMIAGYARNGKCRQALILFNKMRRA 261
R+ D K+ E +V V WTT+I+G+A+ + +A LF +M R
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCG 320
+ +Q +L A L +C+ LG LR G+ +H Y I + + + + I MYA CG
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF-----TSFIDMYARCG 361
Query: 321 VIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
I+ A VF MP+R+ ISW++MI AF G EAL F M+S
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKS 406
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 41/235 (17%)
Query: 59 IHGFS-------QKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+HG S Q Y+ A ++ Y+ L +A K+F+ + +V +W +I G A+ E
Sbjct: 232 VHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCE 291
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++ LF QM PN T + +L C+ G LR G+ VHG ++ NG
Sbjct: 292 RAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI-------- 343
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
E + V + S + +Y RCGN++ AR +FD M ERN
Sbjct: 344 --------------------------EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERN 377
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
V++W++MI + NG +AL F+KM+ +V + V+ V+ LSAC+ G+++ G
Sbjct: 378 VISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEG 432
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 38/232 (16%)
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
LL+ +++ L +QVH +V+++G+ V + ++L N Y + +++A F+
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNR---LDFATSSFNR-- 64
Query: 198 ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC--RQALILF 255
I CW +RN +W T+++GY+++ C L+L+
Sbjct: 65 ---IPCW------------------------KRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 256 NKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
N+MRR +D +LV A+ AC LG L G IH + K + SL + M
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSL----VEM 153
Query: 316 YASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
YA G +E A +VF +P R+++ W ++ + K E +F LM+ G
Sbjct: 154 YAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTG 205
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 11/216 (5%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLS 74
QML E ++P N T + IL S +L++ +H ++ +G + +
Sbjct: 302 QMLRESILP-NQCTLAAILVS-----CSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFID 355
Query: 75 FYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
Y G++ A VF + +V W+ MI + +++ F++M++ PN +T
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVT 415
Query: 135 YSFLLSGCARSGLLREG-EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
+ LLS C+ SG ++EG +Q G P +++L G AG + A+
Sbjct: 416 FVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGE---IGEAKSFI 472
Query: 194 DEMGERNIV-CWNSMLAVYMRCGNVEGARRIFDKMM 228
D M + + W ++L+ V+ A I +K++
Sbjct: 473 DNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLL 508
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 155/323 (47%), Gaps = 38/323 (11%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRG 106
L L ++H + F + ++ Y G L A +VF +++ +V WN +I G
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 107 HARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPN 166
HA+S PR S+ QM+ + P+ T LLS C++ LR G++VHG ++ N
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL--- 527
Query: 167 VFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
ER++ + S+L++Y+ CG + + +FD
Sbjct: 528 -------------------------------ERDLFVYLSVLSLYIHCGELCTVQALFDA 556
Query: 227 MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
M ++++V+W T+I GY +NG +AL +F +M + L +S++ AC+ L LRLG
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICA 346
R H Y + L + SL I MYA G I ++ +VF + ++S SW MI
Sbjct: 617 REAHAYALKHLLEDDAFIACSL----IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 347 FAKQGYANEALAIFELMQSLGAN 369
+ G A EA+ +FE MQ G N
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHN 695
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 140/308 (45%), Gaps = 45/308 (14%)
Query: 68 ILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAA 126
+ ++++ Y G + VF +++ ++ WN +I ++R+E + + F +M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 127 EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
+ P+ TY ++ CA + G VHG V+ G +VF+ L++ YG G
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF---- 237
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNG 246
V A ++FD M ERN+V+W +MI ++ NG
Sbjct: 238 ------------------------------VTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 247 KCRQALILFNKMRRAHVD----LDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKS 301
++ +L +M + D D +LV L CA ++ LG+ +H + ++ +L +
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE- 326
Query: 302 QSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFE 361
+ LNNAL+ MY+ CG I A +F+ ++ +SW TM+ F+ +G + +
Sbjct: 327 ----LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 362 LMQSLGAN 369
M + G +
Sbjct: 383 QMLAGGED 390
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 173/431 (40%), Gaps = 90/431 (20%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFH--LLQSCKTLKYLS---QIHTQIVIHGFSQKSYI 68
Y +LE I I+T+ +L H + ++++C + + +H +V G + ++
Sbjct: 167 YDEVLETFI--EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFV 224
Query: 69 LAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA 128
L+SFY G + A ++F + ++ WN MIR + + +S +L +M
Sbjct: 225 GNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENG 284
Query: 129 E----PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADF 184
+ P++ T +L CAR + G+ VHG + + + L+++Y G
Sbjct: 285 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC-- 342
Query: 185 GVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER-------------- 230
+ AQ +F +N+V WN+M+ + G+ G + +M+
Sbjct: 343 -ITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 401
Query: 231 ---------------------------NVVTWTTMIAGYARNGKCRQALILFNKMR---- 259
N + +A YA+ G A +F+ +R
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTV 461
Query: 260 --------------------RAHVDL-------DQVSLVAALSACAELGDLRLGRWIHTY 292
AH+ + D ++ + LSAC++L LRLG+ +H +
Sbjct: 462 NSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF 521
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGY 352
I + L + L +++ +Y CG + +F M +S +SW T+I + + G+
Sbjct: 522 IIRNW--LERDLFVYL--SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 577
Query: 353 ANEALAIFELM 363
+ AL +F M
Sbjct: 578 PDRALGVFRQM 588
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 46/270 (17%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAK 71
QM + L+P + S LL +C LK L ++H I+ + + ++
Sbjct: 486 QMKISGLLPDSFTVCS---------LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 536
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
+LS YI G L + +F +++ S+ WN +I G+ ++ P +++ +F QM +
Sbjct: 537 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 596
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
++ + C+ LR G + H L + + F+ +LI++Y G+ + + +
Sbjct: 597 GISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS---ITQSSK 653
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
VF+ + E++ WN+ MI GY +G ++A
Sbjct: 654 VFNGLKEKSTASWNA-------------------------------MIMGYGIHGLAKEA 682
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELG 281
+ LF +M+R + D ++ + L+AC G
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSG 712
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 12/222 (5%)
Query: 46 TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIR 105
+L+ + H + H ++I L+ Y +G + + KVF +K S WN MI
Sbjct: 612 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 671
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN-GYY 164
G+ ++++ LF +M+ P+ LT+ +L+ C SGL+ EG + ++ + G
Sbjct: 672 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 731
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVF-DEMGER-NIVCWNSMLAVYMRCGNVEGARR 222
PN+ +I++ G AG ++ A RV +EM E ++ W S+L+ N+E +
Sbjct: 732 PNLKHYACVIDMLGRAGQ---LDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 788
Query: 223 IFDKMME------RNVVTWTTMIAGYARNGKCRQALILFNKM 258
+ K+ E N V + + AG + R+ N+M
Sbjct: 789 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEM 830
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 67/389 (17%)
Query: 41 LQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLS---AHKVFKEVKNPSV 97
L++C++L L+Q+H ++ + L++L+ F ++ A VF+ + PSV
Sbjct: 13 LENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSV 72
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSG-----------CARSG 146
+WN MIRG++ S +P K++I + +M P+ T+ ++L C
Sbjct: 73 YIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF 132
Query: 147 LLREGEQVH--------------GRV--------------------LVNGYYPN------ 166
+++ G +V+ G V L++G+ N
Sbjct: 133 VVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDA 192
Query: 167 --VF--MKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVE 218
F M++N + D V R FD + N++ S++ +Y +CG++
Sbjct: 193 IEAFREMQSNGVKANETIMVDLLVA-CGRCFDPYFQSKVGFNVILATSLIDMYAKCGDLR 251
Query: 219 GARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
AR +FD M ER +V+W ++I GY++NG +AL +F M + D+V+ ++ + A
Sbjct: 252 TARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASM 311
Query: 279 ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI 338
G +LG+ IH Y+ + K +++ AL++MYA G E A + F + K+ I
Sbjct: 312 IQGCSQLGQSIHAYVSKTGFVKDAAIVC----ALVNMYAKTGDAESAKKAFEDLEKKDTI 367
Query: 339 SWTTMICAFAKQGYANEALAIFELMQSLG 367
+WT +I A G+ NEAL+IF+ MQ G
Sbjct: 368 AWTVVIIGLASHGHGNEALSIFQRMQEKG 396
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 9/178 (5%)
Query: 199 RNIVCWNSMLAVYMRCG---NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILF 255
RN++ + ++ C N+ AR +F+ + +V W +MI GY+ + +ALI +
Sbjct: 36 RNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFY 95
Query: 256 NKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
+M R D + L AC+ L D++ G +H ++ + +G ++ +S L+HM
Sbjct: 96 QEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVK--TGFEVNMYVS--TCLLHM 151
Query: 316 YASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG--ANEA 371
Y CG + VF +P+ + ++W ++I F ++A+ F MQS G ANE
Sbjct: 152 YMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANET 209
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 119/280 (42%), Gaps = 40/280 (14%)
Query: 68 ILA-KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAA 126
ILA L+ Y G L +A +F + ++ WN +I G++++ +++ +F M
Sbjct: 235 ILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 294
Query: 127 EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
P+ +T+ ++ G + G+ +H V G+ + + L+N+Y G
Sbjct: 295 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTG---DA 351
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNG 246
E A++ F+++ +++ + W T +I G A +G
Sbjct: 352 ESAKKAFEDLEKKDTIAW-------------------------------TVVIIGLASHG 380
Query: 247 KCRQALILFNKMR-RAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
+AL +F +M+ + + D ++ + L AC+ +G + G+ Y E
Sbjct: 381 HGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQ---RYFAEMRDLHGLEPT 437
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMI 344
+ ++ + + G EEA + + MP + N++ W ++
Sbjct: 438 VEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 477
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 11/231 (4%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
++Q C L IH + GF + + I+ L++ Y +G SA K F++++
Sbjct: 311 MIQGCSQLG--QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA 368
Query: 100 WNQMIRGHARSESPRKSVILFNQMR-AAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRV 158
W +I G A +++ +F +M+ A P+ +TY +L C+ GL+ EG++ +
Sbjct: 369 WTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM 428
Query: 159 L-VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER-NIVCWNSMLAVYMRCGN 216
++G P V ++++ AG E A+R+ M + N+ W ++L N
Sbjct: 429 RDLHGLEPTVEHYGCMVDILSRAGR---FEEAERLVKTMPVKPNVNIWGALLNGCDIHEN 485
Query: 217 VEGARRIFDKMMERNVV---TWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
+E RI + E + + + YA+ G+ ++ M+ VD
Sbjct: 486 LELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVD 536
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 164/336 (48%), Gaps = 43/336 (12%)
Query: 39 HLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
HLL++C L +L +H Q+ GF ++ L++ Y L SA VF+ + P
Sbjct: 124 HLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183
Query: 96 SVTL--WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
T+ W ++ +A++ P +++ +F+QMR + +P+ + +L+ L++G
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
+H V+ G E+ ++ N+M Y +
Sbjct: 244 IHASVVKMGL-------------------------------EIEPDLLISLNTM---YAK 269
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
CG V A+ +FDKM N++ W MI+GYA+NG R+A+ +F++M V D +S+ +A
Sbjct: 270 CGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSA 329
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
+SACA++G L R ++ Y+ S + IS +ALI M+A CG +E A VF
Sbjct: 330 ISACAQVGSLEQARSMYEYVGR--SDYRDDVFIS--SALIDMFAKCGSVEGARLVFDRTL 385
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
R + W+ MI + G A EA++++ M+ G +
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 40/326 (12%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
L+ S L QIH ++++ G +++ KL+ + G + A +VF ++ P +
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
WN +IRG++R+ + ++++++ M+ A P+ T+ LL C+ L+ G VH +V
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD--EMGERNIVCWNSMLAVYMRCGNV 217
G+ +VF++ LI LY + A+ VF+ + ER IV W ++++ Y
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRR---LGSARTVFEGLPLPERTIVSWTAIVSAY------ 197
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
A+NG+ +AL +F++MR+ V D V+LV+ L+A
Sbjct: 198 -------------------------AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
L DL+ GR IH + + LLISLN MYA CG + A +F M +
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT----MYAKCGQVATAKILFDKMKSPNL 288
Query: 338 ISWTTMICAFAKQGYANEALAIFELM 363
I W MI +AK GYA EA+ +F M
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEM 314
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 153/308 (49%), Gaps = 41/308 (13%)
Query: 45 KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMI 104
+ LK IH +V G + +L L + Y G + +A +F ++K+P++ LWN MI
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 105 RGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
G+A++ R+++ +F++M + P+ ++ + +S CA+ G L + ++ V + Y
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIF 224
+VF+ + LI+++ +CG+VEGAR +F
Sbjct: 356 DDVFISSALIDMFA----------------------------------KCGSVEGARLVF 381
Query: 225 DKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLR 284
D+ ++R+VV W+ MI GY +G+ R+A+ L+ M R V + V+ + L AC G +R
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 285 LGRWIHTYI-EEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTT 342
G W + + K++ + Q +I + G +++AYEV + MP + ++ W
Sbjct: 442 EGWWFFNRMADHKINPQQQHYA-----CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 343 MICAFAKQ 350
++ A K
Sbjct: 497 LLSACKKH 504
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 215 GNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
G++ AR++FD + + W +I GY+RN + AL++++ M+ A V D + L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 275 SACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP- 333
AC+ L L++GR++H + +L + + + N LI +YA C + A VF +P
Sbjct: 127 KACSGLSHLQMGRFVHAQVF-RLGFDAD---VFVQNGLIALYAKCRRLGSARTVFEGLPL 182
Query: 334 -KRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
+R+ +SWT ++ A+A+ G EAL IF M+ + + KP
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM---DVKP 220
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 181/394 (45%), Gaps = 55/394 (13%)
Query: 13 SYQMLLEELIPANTITTSRILQQHLFHLLQSC---KTLKYLSQIHTQIVIHGFSQKSYIL 69
S+ L E I N T S +L +C +++ QIH ++ G + SY
Sbjct: 147 SFVSLFENQIFPNKFTFSIVLS--------TCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
L+ Y + A +VF+ + +P+ W + G+ ++ P ++V++F +MR
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGAD-FGVEY 188
P+ L + +++ R G L++ + G + P+V +I+ +G G + +EY
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEM----SSPDVVAWNVMISGHGKRGCETVAIEY 314
Query: 189 ---------------AQRVFDEMG--------------------ERNIVCWNSMLAVYMR 213
V +G NI +S++++Y +
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
C +E A ++F+ + E+N V W MI GYA NG+ + + LF M+ + ++D + +
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
LS CA DL +G H+ I +K K+ + + NAL+ MYA CG +E+A ++F M
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKN----LFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
R N++W T+I ++ + +EA +F+ M G
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 40/315 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H V G + + + L+ Y G + A KVF + SV N +I G++++
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN- 608
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+ ++V+LF +M P+ +T++ ++ C + L G Q HG++ G+
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE----- 663
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME-R 230
G G+ S+L +YM + A +F ++ +
Sbjct: 664 ---------GEYLGI-------------------SLLGMYMNSRGMTEACALFSELSSPK 695
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
++V WT M++G+++NG +AL + +MR V DQ + V L C+ L LR GR IH
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH 755
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAFAK 349
+ I + L +N LI MYA CG ++ + +VF M +RSN +SW ++I +AK
Sbjct: 756 SLIFH----LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 350 QGYANEALAIFELMQ 364
GYA +AL IF+ M+
Sbjct: 812 NGYAEDALKIFDSMR 826
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 39/320 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H + + G + Y+ + L+S Y + +A KVF+ ++ + WN MIRG+A +
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
K + LF M+++ + T++ LLS CA S L G Q H ++ N+F+
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
L+++Y GA +E A+++F+ M +R+ V WN
Sbjct: 469 LVDMYAKCGA---LEDARQIFERMCDRDNVTWN--------------------------- 498
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
T+I Y ++ +A LF +M + D L + L AC + L G+ +H
Sbjct: 499 ----TIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGY 352
+ G + L ++LI MY+ CG+I++A +VF +P+ S +S +I ++ Q
Sbjct: 555 SVK--CGLDRDL--HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNN 609
Query: 353 ANEALAIFELMQSLGANEAK 372
EA+ +F+ M + G N ++
Sbjct: 610 LEEAVVLFQEMLTRGVNPSE 629
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 161/353 (45%), Gaps = 45/353 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H++ +I G + + ++ Y + A K F ++ VT WN M+ ++
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSSIGK 140
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
P K + F + + PN T+S +LS CAR + G Q+H ++ G N +
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGA 200
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA----------------------- 209
L+++Y + A+RVF+ + + N VCW + +
Sbjct: 201 LVDMYAKCDR---ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 210 ------------VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK 257
Y+R G ++ AR +F +M +VV W MI+G+ + G A+ F
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 258 MRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT-YIEEKLSGKSQSLLISLNNALIHMY 316
MR++ V + +L + LSA + +L LG +H I+ L+ I + ++L+ MY
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN-----IYVGSSLVSMY 372
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
+ C +E A +VF + +++++ W MI +A G +++ + +F M+S G N
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 137/279 (49%), Gaps = 42/279 (15%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKS-YILAKL 72
+Q +L + + IT + I++ ++L +Q H QI GFS + Y+ L
Sbjct: 617 FQEMLTRGVNPSEITFATIVEA-----CHKPESLTLGTQFHGQITKRGFSSEGEYLGISL 671
Query: 73 LSFYIASGHLLSAHKVFKEVKNP-SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L Y+ S + A +F E+ +P S+ LW M+ GH+++ +++ + +MR P+
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
T+ +L C+ LREG +H + +
Sbjct: 732 QATFVTVLRVCSVLSSLREGRAIHSLIF----------------------------HLAH 763
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER-NVVTWTTMIAGYARNGKCRQ 250
DE+ N+++ +Y +CG+++G+ ++FD+M R NVV+W ++I GYA+NG
Sbjct: 764 DLDELTS------NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAED 817
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI 289
AL +F+ MR++H+ D+++ + L+AC+ G + GR I
Sbjct: 818 ALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 149/333 (44%), Gaps = 44/333 (13%)
Query: 40 LLQSCKT---LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LL +C L+ SQ H+ I+ ++ ++ L+ Y G L A ++F+ + +
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
WN +I + + E+ ++ LF +M + + L C L +G+QVH
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ G +R++ +S++ +Y +CG
Sbjct: 554 LSVKCGL----------------------------------DRDLHTGSSLIDMYSKCGI 579
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
++ AR++F + E +VV+ +IAGY++N +A++LF +M V+ +++ + A
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 277 CAELGDLRLGRWIHTYIEEK-LSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK- 334
C + L LG H I ++ S + + L ISL + MY + + EA +F +
Sbjct: 639 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISL----LGMYMNSRGMTEACALFSELSSP 694
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+S + WT M+ ++ G+ EAL ++ M+ G
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG 727
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 164/333 (49%), Gaps = 45/333 (13%)
Query: 41 LQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL--SFYIASGHLLS-AHKVFKEVKN-PS 96
L++CKT+ L H + G + KL+ S + + LS A +VF+ ++ +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
++N +IRG+A S ++++LF +M + P+ T+ F LS CA+S G Q+HG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
++ GY ++F++ NS++ Y CG
Sbjct: 159 LIVKMGYAKDLFVQ----------------------------------NSLVHFYAECGE 184
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM-RRAHVDLDQVSLVAALS 275
++ AR++FD+M ERNVV+WT+MI GYAR + A+ LF +M R V + V++V +S
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 276 ACAELGDLRLGRWIHTYIEEKLSG-KSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK 334
ACA+L DL G ++ +I SG + L++S AL+ MY C I+ A +F
Sbjct: 245 ACAKLEDLETGEKVYAFIRN--SGIEVNDLMVS---ALVDMYMKCNAIDVAKRLFDEYGA 299
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ M + +QG EAL +F LM G
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 155/313 (49%), Gaps = 39/313 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH IV G+++ ++ L+ FY G L SA KVF E+ +V W MI G+AR +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 112 SPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
+ +V LF +M R E PN +T ++S CA+ L GE+V+ + +G N M
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
+ L+++Y M+C ++ A+R+FD+
Sbjct: 275 SALVDMY----------------------------------MKCNAIDVAKRLFDEYGAS 300
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
N+ M + Y R G R+AL +FN M + V D++S+++A+S+C++L ++ G+ H
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
Y+ L +S ++ NALI MY C + A+ +F M ++ ++W +++ + +
Sbjct: 361 GYV---LRNGFES-WDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 351 GYANEALAIFELM 363
G + A FE M
Sbjct: 417 GEVDAAWETFETM 429
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 178/358 (49%), Gaps = 19/358 (5%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILA 70
++M+ +E + N++T + ++ +C L+ L +++ I G +++
Sbjct: 224 FRMVRDEEVTPNSVT--------MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
L+ Y+ + A ++F E ++ L N M + R R+++ +FN M + P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+ ++ +S C++ + G+ HG VL NG+ + LI++Y + A
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ---DTAF 392
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
R+FD M + +V WNS++A Y+ G V+ A F+ M E+N+V+W T+I+G + +
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 251 ALILFNKMR-RAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
A+ +F M+ + V+ D V++++ SAC LG L L +WI+ YIE+ L + L
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK----NGIQLDVRLG 508
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
L+ M++ CG E A +F + R +WT I A A G A A+ +F+ M G
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG 566
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 150/336 (44%), Gaps = 13/336 (3%)
Query: 37 LFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
+ + SC L+ + H ++ +GF I L+ Y+ +A ++F +
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
N +V WN ++ G+ + + F M E N+++++ ++SG + L E +
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETM----PEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 154 VHGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVY 211
V + G + ++ + G GA ++ ++ G + ++ +++ ++
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
RCG+ E A IF+ + R+V WT I A G +A+ LF+ M + D V+ V
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
AL+AC+ G ++ G+ I Y KL G S + ++ + G++EEA ++
Sbjct: 576 GALTACSHGGLVQQGKEIF-YSMLKLHGVSPEDV--HYGCMVDLLGRAGLLEEAVQLIED 632
Query: 332 MPKRSN-ISWTTMICAFAKQGYANEALAIFELMQSL 366
MP N + W +++ A QG A E +Q L
Sbjct: 633 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 140/305 (45%), Gaps = 68/305 (22%)
Query: 80 GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE-----------SPRKSVILFNQMRAAEA 128
G + SA+KVF E+ +V LW MI G+ ++ SP + ++L+N M
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMI---- 97
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
SG + G + R L
Sbjct: 98 ----------------SGYIEMGNMLEARSL----------------------------- 112
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
FD+M R+++ WN++L Y G++E R+FD M ERNV +W +I GYA+NG+
Sbjct: 113 ----FDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRV 168
Query: 249 RQALILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
+ L F +M V + ++ LSACA+LG G+W+H Y E K ++
Sbjct: 169 SEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD---VN 225
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ NALI MY CG IE A EVF+ + +R ISW TMI A G+ EAL +F M++ G
Sbjct: 226 VKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSG 285
Query: 368 ANEAK 372
+ K
Sbjct: 286 ISPDK 290
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 140/280 (50%), Gaps = 13/280 (4%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
++S YI G++L A +F ++ V WN ++ G+A +F+ M E N
Sbjct: 96 MISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDM----PERN 151
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNG-YYPNVFMKTNLINLYGMAGA-DFGVEYA 189
+ +++ L+ G A++G + E R++ G PN T +++ GA DFG ++
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG-KWV 210
Query: 190 QRVFDEMG--ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
+ + +G + ++ N+++ +Y +CG +E A +F + R++++W TMI G A +G
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH 270
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
+AL LF++M+ + + D+V+ V L AC +G + G Y + S I
Sbjct: 271 GTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGL---AYFNSMFTDFSIMPEIE 327
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICA 346
++ + + G + +A E MP +++ + W T++ A
Sbjct: 328 HCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA 367
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 43/197 (21%)
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
N + L+GM + A +VF EM E+N+V W SM+ Y+ ++ ARR FD ER+
Sbjct: 30 NQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERD 89
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
+V W TMI+GY G +A LF++M C + + W
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQM-----------------PCRD-----VMSW--- 124
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
N ++ YA+ G +E VF MP+R+ SW +I +A+ G
Sbjct: 125 ------------------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNG 166
Query: 352 YANEALAIFELMQSLGA 368
+E L F+ M G+
Sbjct: 167 RVSEVLGSFKRMVDEGS 183
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 166/337 (49%), Gaps = 39/337 (11%)
Query: 32 ILQQHLFHLLQ-SCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
+ +Q L LL+ S K L +IH ++ GFS+K+ +L +LL + G + A +VF
Sbjct: 8 LTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFD 67
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE 150
E+ P + LWN + +G+ R++ P +S++L+ +MR P+ TY F++ ++ G
Sbjct: 68 EMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC 127
Query: 151 GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAV 210
G +H V+ G+ + T L+ +Y G + A+ +F+ M +++V WN+ LAV
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGE---LSSAEFLFESMQVKDLVAWNAFLAV 184
Query: 211 YMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSL 270
++ GN AL FNKM V D ++
Sbjct: 185 CVQTGNSA-------------------------------IALEYFNKMCADAVQFDSFTV 213
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
V+ LSAC +LG L +G I+ ++ + I + NA + M+ CG E A +F
Sbjct: 214 VSMLSACGQLGSLEIGEEIY----DRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 331 WMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
M +R+ +SW+TMI +A G + EAL +F MQ+ G
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG 306
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 139/299 (46%), Gaps = 40/299 (13%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H +V +GF + +L+ Y+ G L SA +F+ ++ + WN + ++ +
Sbjct: 131 LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGN 190
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
++ FN+M A + + T +LS C + G L GE+++
Sbjct: 191 SAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY----------------- 233
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
R E + NI+ N+ L ++++CGN E AR +F++M +RNV
Sbjct: 234 -----------------DRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNV 276
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
V+W+TMI GYA NG R+AL LF M+ + + V+ + LSAC+ G + G+ Y
Sbjct: 277 VSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGK---RY 333
Query: 293 IEEKLSGKSQSLLISLNN--ALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFA 348
+ ++L + ++ + G++EEAYE + MP + W ++ A A
Sbjct: 334 FSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 160/326 (49%), Gaps = 42/326 (12%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL--SFYIASGHLLSAHKVFKEVKNPSV 97
L+ C ++K+L QIH QI + S+I+++L+ S + L A + + +
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTP 78
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
+ WN + RG++ S+SP +S+ ++++M+ +PN LT+ FLL CA L G Q+
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
VL +G+ +V++ NLI+LYG A++VFDEM ERN+V WNS++ +
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKK---TSDARKVFDEMTERNVVSWNSIMTALV----- 190
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
NGK F +M D+ ++V LSAC
Sbjct: 191 --------------------------ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC 224
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
G+L LG+ +H+ ++ + L L AL+ MYA G +E A VF M ++
Sbjct: 225 G--GNLSLGKLVHS----QVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNV 278
Query: 338 ISWTTMICAFAKQGYANEALAIFELM 363
+W+ MI A+ G+A EAL +F M
Sbjct: 279 WTWSAMIVGLAQYGFAEEALQLFSKM 304
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 42/363 (11%)
Query: 37 LFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L HLL+ Y+S Q+H + HGF + + L+ FY S L AHKVF E+
Sbjct: 58 LVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP 117
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+P V WN ++ G+ +S ++ + LF ++ ++ PN +++ L+ CAR L G
Sbjct: 118 DPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGAC 177
Query: 154 VHGRVLVNGYYP-NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA--- 209
+H +++ G NV + LI++YG G ++ A VF M E++ V WN+++A
Sbjct: 178 IHSKLVKLGLEKGNVVVGNCLIDMYGKCGF---MDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 210 ----------------------------VYMRCGNVEGARRIFDKMMERNVVTWTTMIAG 241
+++ G+ A ++ M N +W T++ G
Sbjct: 235 RNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTG 294
Query: 242 YARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKS 301
Y + K +A F KM + V D+ SL L+A A L + G IH KL S
Sbjct: 295 YVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHA-CAHKLGLDS 353
Query: 302 QSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFE 361
+ ++ S ALI MY+ CG+++ A +F MP+++ I W MI +A+ G + EA+ +F
Sbjct: 354 RVVVAS---ALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFN 410
Query: 362 LMQ 364
++
Sbjct: 411 QLK 413
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 59/222 (26%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
NS++ Y ++E A ++FD+M + +V++W ++++GY ++G+ ++ + LF ++ R+ V
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 265 LDQVSLVAALSACA--------------------ELGDLRLGR----------------W 288
++ S AAL+ACA E G++ +G
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 289 IHTYIEEKLSGKSQSLLISLN-----------------------NALIHMYASCGVIEEA 325
+ ++EEK + +++ S + N LI + G A
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNA 273
Query: 326 YEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++V MP ++ SW T++ + + EA F M S G
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 46/264 (17%)
Query: 53 IHTQIVIHGFSQKSYILAK-LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
IH+++V G + + ++ L+ Y G + A VF+ ++ WN ++ +R+
Sbjct: 178 IHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNG 237
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+ F+QM P+ +TY+ L+ +SG QV L + PN
Sbjct: 238 KLELGLWFFHQM----PNPDTVTYNELIDAFVKSGDFNNAFQV----LSDMPNPNSSSWN 289
Query: 172 NLINLY------GMAGADFGVEYAQRV-FDEMG--------------------------- 197
++ Y G A F ++ V FDE
Sbjct: 290 TILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL 349
Query: 198 --ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILF 255
+ +V ++++ +Y +CG ++ A +F M +N++ W MI+GYARNG +A+ LF
Sbjct: 350 GLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLF 409
Query: 256 NKMRRAH-VDLDQVSLVAALSACA 278
N++++ + D+ + + L+ C+
Sbjct: 410 NQLKQERFLKPDRFTFLNLLAVCS 433
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 169/365 (46%), Gaps = 73/365 (20%)
Query: 39 HLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
+L+Q C + L + +H I GF I +LL Y G L+ A KVF E+ N
Sbjct: 90 NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR 149
Query: 96 SVTLWNQMIRGHA-------------------------------RSESPRKSVILFNQM- 123
+ WN M+ G+A + + P ++++L++ M
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
Query: 124 RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGAD 183
R + PN+ T S ++ A +R G+++HG ++ AG D
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV-------------------RAGLD 250
Query: 184 FGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYA 243
DE V W+S++ +Y +CG ++ AR IFDK++E++VV+WT+MI Y
Sbjct: 251 S---------DE------VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 244 RNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
++ + R+ LF+++ + ++ + L+ACA+L LG+ +H Y+ ++ S
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM-TRVGFDPYS 354
Query: 304 LLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
S +L+ MY CG IE A V PK +SWT++I A+ G +EAL F+L+
Sbjct: 355 FASS---SLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL 411
Query: 364 QSLGA 368
G
Sbjct: 412 LKSGT 416
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 165/321 (51%), Gaps = 31/321 (9%)
Query: 58 VIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESP---- 113
+HGF IL + LS + AS S K F + ++ R + E+
Sbjct: 11 TLHGF-----ILKRNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLC 65
Query: 114 -----RKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF 168
R++V L + + +P TY L+ C+++ L EG++VH + +G+ P +
Sbjct: 66 GQKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV 121
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
+ L+ +Y G+ + A++VFDEM R++ WN M+ Y G +E AR++FD+M
Sbjct: 122 IWNRLLRMYAKCGS---LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT 178
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRR---AHVDLDQVSLVAALSACAELGDLRL 285
E++ +WT M+ GY + + +AL+L++ M+R + ++ VS+ A +A + +R
Sbjct: 179 EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC--IRR 236
Query: 286 GRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMIC 345
G+ IH +I + S +L S +L+ MY CG I+EA +F + ++ +SWT+MI
Sbjct: 237 GKEIHGHI-VRAGLDSDEVLWS---SLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 346 AFAKQGYANEALAIF-ELMQS 365
+ K E ++F EL+ S
Sbjct: 293 RYFKSSRWREGFSLFSELVGS 313
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 133/310 (42%), Gaps = 42/310 (13%)
Query: 45 KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMI 104
K ++ +IH IV G + + L+ Y G + A +F ++ V W MI
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI 291
Query: 105 RGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
+ +S R+ LF+++ + PN T++ +L+ CA G+QVHG + G+
Sbjct: 292 DRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIF 224
P F ++L+++Y +CGN+E A+ +
Sbjct: 352 PYSFASSSLVDMY----------------------------------TKCGNIESAKHVV 377
Query: 225 DKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLR 284
D + ++V+WT++I G A+NG+ +AL F+ + ++ D V+ V LSAC G +
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVE 437
Query: 285 LGRWIHTYIEEK--LSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWT 341
G I EK LS S L+ + A G E+ V MP K S W
Sbjct: 438 KGLEFFYSITEKHRLSHTSDHY-----TCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 342 TMICAFAKQG 351
+++ + G
Sbjct: 493 SVLGGCSTYG 502
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 26/221 (11%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H + GF S+ + L+ Y G++ SA V P + W +I G A++
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG-------EQVHGRVLVNGYY 164
P +++ F+ + + +P+ +T+ +LS C +GL+ +G + H + +Y
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY 459
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER-NIVCWNSMLAVYMRCGNV----EG 219
T L++L +G E + V EM + + W S+L GN+ E
Sbjct: 460 ------TCLVDLLARSGR---FEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEA 510
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRR 260
A+ +F K+ N VT+ TM YA GK + KMR+
Sbjct: 511 AQELF-KIEPENPVTYVTMANIYAAAGKWEEE----GKMRK 546
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 168/354 (47%), Gaps = 51/354 (14%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILA 70
++ ++++ + + +T + +++ C L L +H QI F +
Sbjct: 190 FKCMVDDGVEPDAVT--------MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
LL+ Y G LLS+ ++F+++ + W MI + R E K++ F++M + EP
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
NL+T +LS C GL+REG+ VHG + PN + +L
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPN-YESLSL----------------- 343
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+++ +Y CG + + + +RN+V W ++I+ YA G Q
Sbjct: 344 ---------------ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQ 388
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLN 309
AL LF +M + D +L +++SAC G + LG+ IH + I +S + +
Sbjct: 389 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE------FVQ 442
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
N+LI MY+ G ++ A VF + RS ++W +M+C F++ G + EA+++F+ M
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 178/369 (48%), Gaps = 63/369 (17%)
Query: 13 SYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQK------- 65
S+ +++ I N +T L+ +L SC + + + + +HGF+ +
Sbjct: 290 SFSEMIKSGIEPNLVT--------LYSVLSSCGLIGLIREGKS---VHGFAVRRELDPNY 338
Query: 66 -SYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR 124
S LA L+ Y G L V + V + ++ WN +I +A +++ LF QM
Sbjct: 339 ESLSLA-LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMV 397
Query: 125 AAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADF 184
+P+ T + +S C +GL+ G+Q+HG V+ D
Sbjct: 398 TQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI---------------------RTDV 436
Query: 185 GVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYAR 244
E+ Q NS++ +Y + G+V+ A +F+++ R+VVTW +M+ G+++
Sbjct: 437 SDEFVQ--------------NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQ 482
Query: 245 NGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSL 304
NG +A+ LF+ M +++++++V+ +A + AC+ +G L G+W+H + +SG
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL--IISGLKD-- 538
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
+ + ALI MYA CG + A VFR M RS +SW++MI A+ G A++ F M
Sbjct: 539 -LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV 597
Query: 365 SLGANEAKP 373
G KP
Sbjct: 598 ESG---TKP 603
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 155/313 (49%), Gaps = 39/313 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
++H +I+ G + I LL Y +G+L A KVF + + W+ ++ +
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
K++ +F M EP+ +T ++ GCA G LR VHG++
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQI------------- 228
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+++FD +C NS+L +Y +CG++ + RIF+K+ ++N
Sbjct: 229 -----------------TRKMFDL---DETLC-NSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
V+WT MI+ Y R +AL F++M ++ ++ + V+L + LS+C +G +R G+ +H
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 292 Y-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
+ + +L +SL + AL+ +YA CG + + V R + R+ ++W ++I +A +
Sbjct: 328 FAVRRELDPNYESLSL----ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHR 383
Query: 351 GYANEALAIFELM 363
G +AL +F M
Sbjct: 384 GMVIQALGLFRQM 396
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 162/330 (49%), Gaps = 40/330 (12%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYI-LAKLLSFYIASGHLLSAHKVFKEVKNPSVT 98
L +SC +L+ +SQ+H +++ G ++ + + KL+ Y G S+ VF+ P
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 99 LWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARS-GLLREGEQVHGR 157
++ +I+ + ++ L++++ + + + + +L CA S L G +VHGR
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
++ G + ++T+L+ +YG + GN+
Sbjct: 127 IIKGGVDDDAVIETSLLCMYG----------------------------------QTGNL 152
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
A ++FD M R++V W+T+++ NG+ +AL +F M V+ D V++++ + C
Sbjct: 153 SDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGC 212
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
AELG LR+ R +H I K+ ++L N+L+ MY+ CG + + +F + K++
Sbjct: 213 AELGCLRIARSVHGQITRKMFDLDETLC----NSLLTMYSKCGDLLSSERIFEKIAKKNA 268
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+SWT MI ++ + ++ +AL F M G
Sbjct: 269 VSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 142/298 (47%), Gaps = 49/298 (16%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH ++ S + ++ L+ Y SG + SA VF ++K+ SV WN M+ G +++
Sbjct: 426 QIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNG 484
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+ +++ LF+ M + E N +T+ ++ C+ G L +G+ VH +++++G ++F T
Sbjct: 485 NSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDT 543
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
LI++Y +CG++ A +F M R+
Sbjct: 544 ALIDMYA----------------------------------KCGDLNAAETVFRAMSSRS 569
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
+V+W++MI Y +G+ A+ FN+M + ++V + LSAC G + G++
Sbjct: 570 IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN 629
Query: 292 YIEEKLSGKSQSLLISLNN----ALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMI 344
+ +S +S N+ I + + G ++EAY + MP ++ S W +++
Sbjct: 630 LM--------KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLV 679
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 158/332 (47%), Gaps = 43/332 (12%)
Query: 40 LLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L++C K L++ Q+H+ +V ++ L+ Y G + KVF + N +
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN 349
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
W +I HAR +++ LF M+ N LT +L C G L G+++H
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+++ N NV++ + L+ W +Y +CG
Sbjct: 410 QIIKNSIEKNVYIGSTLV-----------------------------W-----LYCKCGE 435
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
A + ++ R+VV+WT MI+G + G +AL +M + V+ + + +AL A
Sbjct: 436 SRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKA 495
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLL-ISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
CA L +GR IH+ ++ K+ +L + + +ALIHMYA CG + EA+ VF MP++
Sbjct: 496 CANSESLLIGRSIHS-----IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEK 550
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ +SW MI +A+ G+ EAL + M++ G
Sbjct: 551 NLVSWKAMIMGYARNGFCREALKLMYRMEAEG 582
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 148/322 (45%), Gaps = 40/322 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H +V G + + L+ FY G L SA + F ++ V W +I +R
Sbjct: 205 QVHGNMVKVGVGNL-IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKG 263
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
K++ +F M PN T +L C+ LR G QVH V+ +VF+ T
Sbjct: 264 HGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGT 323
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+L+++ Y +CG + R++FD M RN
Sbjct: 324 SLMDM----------------------------------YAKCGEISDCRKVFDGMSNRN 349
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VTWT++IA +AR G +A+ LF M+R H+ + +++V+ L AC +G L LG+ +H
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
I + K+ + + + L+ +Y CG +A+ V + +P R +SWT MI + G
Sbjct: 410 QIIKNSIEKN----VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Query: 352 YANEALAIFELMQSLGANEAKP 373
+ +EAL + M G E P
Sbjct: 466 HESEALDFLKEMIQEGV-EPNP 486
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 161/343 (46%), Gaps = 40/343 (11%)
Query: 23 PANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHL 82
+++ + R+ L LQS ++ + +IH + Q Y L+S + G L
Sbjct: 74 DSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDL 133
Query: 83 LSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILF-NQMRAAEAEPNLLTYSFLLSG 141
+ A KVF + + W MI G+ + ++ LF + ++ N + LL+
Sbjct: 134 VYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNL 193
Query: 142 CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI 201
C+R G QVHG ++ ++G N+
Sbjct: 194 CSRRAEFELGRQVHGNMV-----------------------------------KVGVGNL 218
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA 261
+ +S++ Y +CG + A R FD M E++V++WT +I+ +R G +A+ +F M
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH 278
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV 321
++ ++ + L AC+E LR GR +H+ + +++ + + +L+ MYA CG
Sbjct: 279 WFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTD----VFVGTSLMDMYAKCGE 334
Query: 322 IEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
I + +VF M R+ ++WT++I A A++G+ EA+++F +M+
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 108/255 (42%), Gaps = 40/255 (15%)
Query: 40 LLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L++C ++ L ++H QI+ + + YI + L+ Y G A V +++ +
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD 450
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V W MI G + +++ +M EPN TYS L CA S L G +H
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS 510
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
N NVF+ + LI++Y G V A RVFD M E+N+V W +
Sbjct: 511 IAKKNHALSNVFVGSALIHMYAKCGF---VSEAFRVFDSMPEKNLVSWKA---------- 557
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
MI GYARNG CR+AL L +M ++D LS
Sbjct: 558 ---------------------MIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 277 CAELGDLRLGRWIHT 291
C GD+ L + +
Sbjct: 597 C---GDIELDEAVES 608
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 43/316 (13%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
I + +G +++ L++ Y+ L AH++F ++ +V W MI +++ +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
+K++ L M PN+ TYS +L C +R +H ++ G +VF+++
Sbjct: 143 HQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSA 199
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
LI+ V+ + G E A +FD+M+ +
Sbjct: 200 LID----------------------------------VFAKLGEPEDALSVFDEMVTGDA 225
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
+ W ++I G+A+N + AL LF +M+RA +Q +L + L AC L L LG H +
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGY 352
I + Q L+ LNNAL+ MY CG +E+A VF M +R I+W+TMI A+ GY
Sbjct: 286 IVKY----DQDLI--LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 353 ANEALAIFELMQSLGA 368
+ EAL +FE M+S G
Sbjct: 340 SQEALKLFERMKSSGT 355
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 40/308 (12%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
+L+SC + + +H I+ G ++ + L+ + G A VF E+ +
Sbjct: 168 VLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
WN +I G A++ ++ LF +M+ A T + +L C LL G Q H +
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI- 286
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
V+Y Q +++ N+++ +Y +CG++E
Sbjct: 287 --------------------------VKYDQ---------DLILNNALVDMYCKCGSLED 311
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
A R+F++M ER+V+TW+TMI+G A+NG ++AL LF +M+ + + +++V L AC+
Sbjct: 312 ALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-I 338
G L G W + +KL G + +I + G +++A ++ M + +
Sbjct: 372 AGLLEDG-WYYFRSMKKLYGIDP--VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 428
Query: 339 SWTTMICA 346
+W T++ A
Sbjct: 429 TWRTLLGA 436
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 22/187 (11%)
Query: 34 QQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
Q L +L++C L L Q H IV + Q + L+ Y G L A +VF
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNNALVDMYCKCGSLEDALRVFN 317
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE 150
++K V W+ MI G A++ ++++ LF +M+++ +PN +T +L C+ +GLL +
Sbjct: 318 QMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 151 G-------EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIV 202
G ++++G V +Y +I+L G AG ++ A ++ +EM E + V
Sbjct: 378 GWYYFRSMKKLYGIDPVREHY------GCMIDLLGKAGK---LDDAVKLLNEMECEPDAV 428
Query: 203 CWNSMLA 209
W ++L
Sbjct: 429 TWRTLLG 435
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 163/357 (45%), Gaps = 52/357 (14%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLK---YLSQIHTQIVIHGFSQKSYILAK 71
+ML E+ P N + ++ ++C LK + +H +V G ++ +
Sbjct: 163 EMLENEIFPDNFVVP---------NVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASS 213
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L Y G L A KVF E+ + + WN ++ G+ ++ +++ LF+ MR EP
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+T S LS A G + EG+Q H +VNG + + T+L+N Y G +EYA+
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL---IEYAEM 330
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
VFD M E+++V WN +I+GY + G A
Sbjct: 331 VFDRMFEKDVVTWN-------------------------------LIISGYVQQGLVEDA 359
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNN 310
+ + MR + D V+L +SA A +L+LG+ + Y I I L +
Sbjct: 360 IYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD-----IVLAS 414
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++ MYA CG I +A +VF ++ I W T++ A+A+ G + EAL +F MQ G
Sbjct: 415 TVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 170/355 (47%), Gaps = 45/355 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q H +++G + + LL+FY G + A VF + V WN +I G+ +
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++ + MR + + + +T + L+S AR+ L+ G++V + + + ++ + +
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAS 414
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY-------------------- 211
++++Y G+ + A++VFD E++++ WN++LA Y
Sbjct: 415 TVMDMYAKCGS---IVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 212 ---------------MRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQAL 252
+R G V+ A+ +F +M N+++WTTM+ G +NG +A+
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Query: 253 ILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
+ KM+ + + + S+ ALSACA L L +GR IH YI L S L+S+ +L
Sbjct: 532 LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL---QHSSLVSIETSL 588
Query: 313 IHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ MYA CG I +A +VF MI A+A G EA+A++ ++ +G
Sbjct: 589 VDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG 643
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 156/339 (46%), Gaps = 43/339 (12%)
Query: 31 RILQQHLFHLLQSCKTLKYLS---QIHTQIVIHG--FSQKSYILAKLLSFYIASGHLLSA 85
RI + +LQ C + LS QIH +I+ +G +++ YI KL+ FY L A
Sbjct: 67 RIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIA 126
Query: 86 HKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARS 145
+F +++ +V W +I R +++ F +M E P+ + C
Sbjct: 127 EVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGAL 186
Query: 146 GLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWN 205
R G VHG V+ +G VF+ ++L ++YG G ++ A +VFDE+ +RN V WN
Sbjct: 187 KWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGV---LDDASKVFDEIPDRNAVAWN 243
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
+++ Y++ G E A R LF+ MR+ V+
Sbjct: 244 ALMVGYVQNGKNEEAIR-------------------------------LFSDMRKQGVEP 272
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
+V++ LSA A +G + G+ H ++G + L +L++ Y G+IE A
Sbjct: 273 TRVTVSTCLSASANMGGVEEGKQSHAI--AIVNGMELDNI--LGTSLLNFYCKVGLIEYA 328
Query: 326 YEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
VF M ++ ++W +I + +QG +A+ + +LM+
Sbjct: 329 EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 40/285 (14%)
Query: 90 KEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLR 149
++ +PS T + + ++ ++++ L +M Y +L GC L
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 150 EGEQVHGRVLVNG--YYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSM 207
G+Q+H R+L NG Y N +++T L+ +F
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLV-----------------IF-------------- 116
Query: 208 LAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
Y +C +E A +F K+ RNV +W +I R G C AL+ F +M + D
Sbjct: 117 ---YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDN 173
Query: 268 VSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYE 327
+ AC L R GR +H Y+ + SG + ++ ++L MY CGV+++A +
Sbjct: 174 FVVPNVCKACGALKWSRFGRGVHGYVVK--SGLEDCVFVA--SSLADMYGKCGVLDDASK 229
Query: 328 VFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
VF +P R+ ++W ++ + + G EA+ +F M+ G +
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTR 274
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 132/330 (40%), Gaps = 40/330 (12%)
Query: 45 KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMI 104
+ LK ++ + H F + + ++ Y G ++ A KVF + LWN ++
Sbjct: 389 ENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLL 448
Query: 105 RGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
+A S +++ LF M+ PN++T++ ++ R+G + E + + ++ +G
Sbjct: 449 AAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII 508
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERN------------------------ 200
PN+ T ++N G R E G R
Sbjct: 509 PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Query: 201 -------------IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
+ S++ +Y +CG++ A ++F + + MI+ YA G
Sbjct: 569 HGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGN 628
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
++A+ L+ + + D +++ LSAC GD+ I T I +S +S +
Sbjct: 629 LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDI---VSKRSMKPCLE 685
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
++ + AS G E+A + MP + +
Sbjct: 686 HYGLMVDLLASAGETEKALRLIEEMPFKPD 715
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H GF+ + I LL+ Y + +A F E + +V LWN M+ + +
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
R S +F QM+ E PN TY +L C R G L GEQ+H +++ + N ++ +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
LI++Y + G ++ A I + ++
Sbjct: 530 VLIDMYA----------------------------------KLGKLDTAWDILIRFAGKD 555
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VV+WTTMIAGY + +AL F +M + D+V L A+SACA L L+ G+ IH
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+ +SG S L NAL+ +Y+ CG IEE+Y F NI+W ++ F + G
Sbjct: 616 --QACVSGFSSDL--PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Query: 352 YANEALAIFELMQSLGAN 369
EAL +F M G +
Sbjct: 672 NNEEALRVFVRMNREGID 689
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 165/352 (46%), Gaps = 50/352 (14%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAK 71
QM +EE++P N T IL+ +C L L QIH+QI+ F +Y+ +
Sbjct: 480 QMQIEEIVP-NQYTYPSILK--------TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L+ Y G L +A + V W MI G+ + K++ F QM +
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+ + +S CA L+EG+Q+H + V+G+ ++ +
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ--------------------- 629
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
N+++ +Y RCG +E + F++ + + W +++G+ ++G +A
Sbjct: 630 -------------NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
L +F +M R +D + + +A+ A +E +++ G+ +H I K S++ + NA
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT-KTGYDSET---EVCNA 732
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
LI MYA CG I +A + F + ++ +SW +I A++K G+ +EAL F+ M
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 150/331 (45%), Gaps = 41/331 (12%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L +CK ++ L Q+H ++ GFS +Y+ L+S Y G+L+SA +F +
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+N +I G ++ K++ LF +M EP+ T + L+ C+ G L G+Q+H
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
G+ N ++ L+NLY AD +E A F E N+V WN ML Y +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKC-AD--IETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+ + RIF +M +V +Q + + L
Sbjct: 471 LRNSFRIFRQMQIEEIVP-------------------------------NQYTYPSILKT 499
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
C LGDL LG IH+ I K + + + + S+ LI MYA G ++ A+++ +
Sbjct: 500 CIRLGDLELGEQIHSQI-IKTNFQLNAYVCSV---LIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLG 367
+SWTTMI + + + ++AL F M G
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 155/343 (45%), Gaps = 45/343 (13%)
Query: 31 RILQQHLFHLLQSC----KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH 86
R Q L LL+ C +L ++H+QI+ G + KL FY+ G L A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
KVF E+ ++ WN+MI+ A + LF +M + PN T+S +L C R G
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGG 199
Query: 147 LLREG--EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCW 204
+ EQ+H R+L G + + +VC
Sbjct: 200 SVAFDVVEQIHARILYQG---------------------------------LRDSTVVC- 225
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
N ++ +Y R G V+ ARR+FD + ++ +W MI+G ++N +A+ LF M +
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
+ + LSAC ++ L +G +H + KL S + + NAL+ +Y G +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVL-KLGFSSDTYVC---NALVSLYFHLGNLIS 341
Query: 325 AYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
A +F M +R +++ T+I ++ GY +A+ +F+ M G
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 130/305 (42%), Gaps = 42/305 (13%)
Query: 45 KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMI 104
+ LK QIH Q + GFS L++ Y G + ++ F++ + WN ++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 105 RGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
G +S + +++ +F +M + N T+ + + + +++G+QVH + GY
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 724
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIF 224
+ LI++Y G+ + A++ F E+ +N V WN+++ Y + G A F
Sbjct: 725 SETEVCNALISMYAKCGS---ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 225 DKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG--D 282
D+M+ NV R H V+LV LSAC+ +G D
Sbjct: 782 DQMIHSNV--------------------------RPNH-----VTLVGVLSACSHIGLVD 810
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWT 341
+ + E LS K + + ++ M G++ A E + MP K + W
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYV-----CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWR 865
Query: 342 TMICA 346
T++ A
Sbjct: 866 TLLSA 870
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 158/341 (46%), Gaps = 44/341 (12%)
Query: 30 SRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH 86
+R+ L +L + L+ L QIH+ G Y+L +S Y G +
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
+F+E + P + +N MI G+ + S+ LF ++ + A L S L+S SG
Sbjct: 277 ALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR---LRSSTLVSLVPVSG 333
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS 206
L +HG L K+N ++ ++ A
Sbjct: 334 HLMLIYAIHGYCL----------KSNFLSHASVSTA------------------------ 359
Query: 207 MLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
+ VY + +E AR++FD+ E+++ +W MI+GY +NG A+ LF +M+++ +
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
V++ LSACA+LG L LG+W+H + S I ++ ALI MYA CG I EA
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESS----IYVSTALIGMYAKCGSIAEAR 475
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+F M K++ ++W TMI + G EAL IF M + G
Sbjct: 476 RLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 172/354 (48%), Gaps = 42/354 (11%)
Query: 16 MLLEELIPANTITTSRILQQHLF-HLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLS 74
MLL + A TT+ ++ ++ + + ++ +L+Q H QI++HGF +L KL
Sbjct: 1 MLLRTVSSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQ 60
Query: 75 FYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR-AAEAEPNLL 133
G + A +F V+ P V L+N ++RG + +ESP S+ +F +R + + +PN
Sbjct: 61 RLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSS 120
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
TY+F +S + R G +HG+ +V+G + + +N++ +Y
Sbjct: 121 TYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMY---------------- 164
Query: 194 DEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
+ VE AR++FD+M E++ + W TMI+GY +N +++
Sbjct: 165 ------------------FKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQ 206
Query: 254 LFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
+F + + LD +L+ L A AEL +LRLG IH+ + K S +++
Sbjct: 207 VFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS-LATKTGCYSHDYVLT---GF 262
Query: 313 IHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF-ELMQS 365
I +Y+ CG I+ +FR K +++ MI + G +L++F ELM S
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 40/237 (16%)
Query: 59 IHGFSQKSYILA------KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IHG+ KS L+ L + Y + SA K+F E S+ WN MI G+ ++
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
++ LF +M+ +E PN +T + +LS CA+ G L G+ VH V + ++++ T
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
LI +Y +CG++ ARR+FD M ++N
Sbjct: 461 LIGMYA----------------------------------KCGSIAEARRLFDLMTKKNE 486
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI 289
VTW TMI+GY +G+ ++AL +F +M + + V+ + L AC+ G ++ G I
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L +C L LS +H + F Y+ L+ Y G + A ++F + +
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
WN MI G+ ++++ +F +M + P +T+ +L C+ +GL++EG+++
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 157 RVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRC 214
++ G+ P+V ++++ G AG ++ A + + M E W ++L
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGH---LQRALQFIEAMSIEPGSSVWETLLGACRIH 602
Query: 215 GNVEGARRIFDKMME 229
+ AR + +K+ E
Sbjct: 603 KDTNLARTVSEKLFE 617
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 153/303 (50%), Gaps = 42/303 (13%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR-AAEAEP 130
L+ ++ G+L+ A VF ++ ++ WN ++ G+A+ +++ L+++M +P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
++ T+ +L C L G++VH V+ GY
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY--------------------------- 227
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
E +I N+++ +Y++CG+V+ AR +FD+M R++++W MI+GY NG C +
Sbjct: 228 -------ELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
L LF MR VD D ++L + +SAC LGD RLGR IH Y+ ++ IS+ N
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYV----ITTGFAVDISVCN 336
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANE 370
+L MY + G EA ++F M ++ +SWTTMI + ++A+ + +M +
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ---DS 393
Query: 371 AKP 373
KP
Sbjct: 394 VKP 396
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 164/330 (49%), Gaps = 45/330 (13%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L++C + L+ ++H +V +G+ ++ L++ Y+ G + SA +F +
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ WN MI G+ + + + LF MR +P+L+T + ++S C G R G +H
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
V+ G F V+ + VC NS+ +Y+ G+
Sbjct: 322 YVITTG---------------------FAVDIS------------VC-NSLTQMYLNAGS 347
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
A ++F +M +++V+WTTMI+GY N +A+ + M + V D++++ A LSA
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQ--SLLISLNNALIHMYASCGVIEEAYEVFRWMPK 334
CA LGDL G +H KL+ K++ S +I NN LI+MY+ C I++A ++F +P+
Sbjct: 408 CATLGDLDTGVELH-----KLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHNIPR 461
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELMQ 364
++ ISWT++I EAL M+
Sbjct: 462 KNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR-RAHV 263
N+ LA+++R GN+ A +F KM ERN+ +W ++ GYA+ G +A+ L+++M V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
D + L C + DL G+ +H ++ L I + NALI MY CG ++
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR----YGYELDIDVVNALITMYVKCGDVK 248
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
A +F MP+R ISW MI + + G +E L +F M+ L +
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD 294
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 139/312 (44%), Gaps = 40/312 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
IH ++ GF+ + L Y+ +G A K+F ++ + W MI G+ +
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
P K++ + M +P+ +T + +LS CA G L G ++H + V +
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
NLIN+Y ++ A +F + +N+
Sbjct: 438 NLINMYSKCKC---IDKALDIFHNIPRKNV------------------------------ 464
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
++WT++IAG N +C +ALI +M+ + + ++L AAL+ACA +G L G+ IH
Sbjct: 465 -ISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHA 522
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
++ G L L NAL+ MY CG + A+ F K+ SW ++ ++++G
Sbjct: 523 HVLRTGVG----LDDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERG 577
Query: 352 YANEALAIFELM 363
+ + +F+ M
Sbjct: 578 QGSMVVELFDRM 589
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 158/369 (42%), Gaps = 71/369 (19%)
Query: 12 SSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAK 71
+Y+M+ ++ + + IT + +L +C TL + T + +H K I A+
Sbjct: 384 DTYRMMDQDSVKPDEITVAAVLS--------ACATL---GDLDTGVELH----KLAIKAR 428
Query: 72 LLSFYIASGHLLS----------AHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFN 121
L+S+ I + +L++ A +F + +V W +I G + +++I
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 122 QMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAG 181
QM+ +PN +T + L+ CAR G L G+++H VL G + F+ L+++Y G
Sbjct: 489 QMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 547
Query: 182 ADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV----VTWTT 237
+ A F+ ++++ WN +L Y G +FD+M++ V +T+ +
Sbjct: 548 R---MNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFIS 603
Query: 238 MIAGYARNGKCRQALILFNKM-------------------------RRAH-------VDL 265
++ G +++ RQ L+ F+KM + AH V
Sbjct: 604 LLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
D A L+AC + LG +I E L KS I L N +YA CG E
Sbjct: 664 DPAVWGALLNACRIHHKIDLGELSAQHIFE-LDKKSVGYYILLCN----LYADCGKWREV 718
Query: 326 YEVFRWMPK 334
+V R M +
Sbjct: 719 AKVRRMMKE 727
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 241 GYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGK 300
G NGK +A+ L N M+ V +D+ VA + C G +++ +S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS-- 125
Query: 301 SQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
SL + L NA + M+ G + +A+ VF M +R+ SW ++ +AKQGY +EA+ ++
Sbjct: 126 --SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 361 ELMQSLGANEAKP 373
M +G KP
Sbjct: 184 HRMLWVGG--VKP 194
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 164/346 (47%), Gaps = 50/346 (14%)
Query: 35 QHLFHLLQSC----KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
Q + LL C +L ++H I+ +G Q ++ KL+ Y G + A KVF
Sbjct: 77 QQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFD 136
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGL--- 147
+ + ++ +WN + R + + + L+ +M E + TY+++L C S
Sbjct: 137 KTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVN 196
Query: 148 -LREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG-VEYAQRVFDEMGERNIVCWN 205
L +G+++H + GY +V++ T L+++Y A FG V+YA VF M RN+V W+
Sbjct: 197 HLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY----ARFGCVDYASYVFGGMPVRNVVSWS 252
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD- 264
+M+A Y A+NGK +AL F +M R D
Sbjct: 253 AMIACY-------------------------------AKNGKAFEALRTFREMMRETKDS 281
Query: 265 -LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
+ V++V+ L ACA L L G+ IH YI + ++ + +AL+ MY CG +E
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILR----RGLDSILPVISALVTMYGRCGKLE 337
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
VF M R +SW ++I ++ GY +A+ IFE M + GA+
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS 383
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 53/283 (18%)
Query: 92 VKNPSVTLW-------NQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCAR 144
+ NPS++ NQ+I+ + ++++ + +Q E+ P+ TY L+ C
Sbjct: 34 LNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGH 89
Query: 145 SGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCW 204
L + +VH +L NG + F+ T LI +Y G+ V+YA++VFD+ +R I W
Sbjct: 90 RSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS---VDYARKVFDKTRKRTIYVW 146
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
N++ G+ E + L L+ KM R V+
Sbjct: 147 NALFRALTLAGHGE-------------------------------EVLGLYWKMNRIGVE 175
Query: 265 LDQVSLVAALSAC----AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCG 320
D+ + L AC + L G+ IH + L+ + S + + L+ MYA G
Sbjct: 176 SDRFTYTYVLKACVASECTVNHLMKGKEIHAH----LTRRGYSSHVYIMTTLVDMYARFG 231
Query: 321 VIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
++ A VF MP R+ +SW+ MI +AK G A EAL F M
Sbjct: 232 CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 36/238 (15%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+IH + G+S YI+ L+ Y G + A VF + +V W+ MI +A++
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG 262
Query: 112 SPRKSVILFNQM--RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFM 169
+++ F +M ++ PN +T +L CA L +G+ +HG +L G + +
Sbjct: 263 KAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV 322
Query: 170 KTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
+ L+ +YG RCG +E +R+FD+M +
Sbjct: 323 ISALVTMYG----------------------------------RCGKLEVGQRVFDRMHD 348
Query: 230 RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
R+VV+W ++I+ Y +G ++A+ +F +M V+ V+ L AC+ G + G+
Sbjct: 349 RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGK 406
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+LQ+C +L L Q IH I+ G +++ L++ Y G L +VF + +
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V WN +I + +K++ +F +M A A P +T+ +L C+ GL+ EG+++
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 157 RVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
+ + G P + +++L G A+ E A+ V D E W S+L G
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGR--ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Query: 216 NVE----GARRIF 224
NVE +RR+F
Sbjct: 469 NVELAERASRRLF 481
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 180/372 (48%), Gaps = 56/372 (15%)
Query: 12 SSYQMLLEELIPANTITTSRILQQHL-----------FH----LLQSC---KTLKYLSQI 53
S +L+ ++P + + ++ LQ+ L FH LL +C + L+ ++
Sbjct: 15 SPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRV 74
Query: 54 HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESP 113
H ++ + +Y+ +LL FY L A KV E+ +V W MI ++++
Sbjct: 75 HAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHS 134
Query: 114 RKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNL 173
+++ +F +M ++ +PN T++ +L+ C R+ L G+Q+HG ++ Y ++F+ ++L
Sbjct: 135 SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSL 194
Query: 174 INLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVV 233
+++Y A G ++ AR IF+ + ER+VV
Sbjct: 195 LDMYAKA----------------------------------GQIKEAREIFECLPERDVV 220
Query: 234 TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYI 293
+ T +IAGYA+ G +AL +F+++ + + V+ + L+A + L L G+ H ++
Sbjct: 221 SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV 280
Query: 294 EEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYA 353
+ L N+LI MY+ CG + A +F MP+R+ ISW M+ ++K G
Sbjct: 281 LRR----ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 354 NEALAIFELMQS 365
E L +F LM+
Sbjct: 337 REVLELFRLMRD 348
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 38/233 (16%)
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
Y LL+ C LR+G++VH ++ Y P +++T L+ YG
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYG---------------- 98
Query: 195 EMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALIL 254
+C +E AR++ D+M E+NVV+WT MI+ Y++ G +AL +
Sbjct: 99 ------------------KCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTV 140
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
F +M R+ ++ + L++C L LG+ IH I K + S I + ++L+
Sbjct: 141 FAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV-KWNYDSH---IFVGSSLLD 196
Query: 315 MYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
MYA G I+EA E+F +P+R +S T +I +A+ G EAL +F + S G
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH IV + ++ + LL Y +G + A ++F+ + V +I G+A+
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+++ +F+++ + PN +TY+ LL+ + LL G+Q H VL
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL-----------R 282
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+ Y V NS++ +Y +CGN+ ARR+FD M ER
Sbjct: 283 RELPFYA-----------------------VLQNSLIDMYSKCGNLSYARRLFDNMPERT 319
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMR-RAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
++W M+ GY+++G R+ L LF MR V D V+L+A LS C+ GR
Sbjct: 320 AISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH------GRMED 373
Query: 291 TYI---EEKLSGKSQSLLISLN-NALIHMYASCGVIEEAYEVFRWMPKRSN 337
T + + ++G+ + + + ++ M G I+EA+E + MP +
Sbjct: 374 TGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 151/330 (45%), Gaps = 41/330 (12%)
Query: 41 LQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
+ +C L +L +IH + V GF Y+ + L+ Y L A +VF+++ S+
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL 274
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
WN MI+G+ + V + N+M P+ T + +L C+RS L G+ +HG
Sbjct: 275 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY 334
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
V+ + ++++ +LI+LY +CG
Sbjct: 335 VIRSVVNADIYVNCSLIDLY----------------------------------FKCGEA 360
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
A +F K + +W MI+ Y G +A+ ++++M V D V+ + L AC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
++L L G+ IH I E + LL +AL+ MY+ CG +EA+ +F +PK+
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLL----SALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+SWT MI A+ G EAL F+ MQ G
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 160/335 (47%), Gaps = 48/335 (14%)
Query: 37 LFHLLQSC----KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV 92
L LL+ C K+L+ + +H +I+ G + + L++ Y SA VF+
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 93 K-NPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLRE 150
V +WN ++ G++++ ++ +F ++ + P+ T+ ++ A L RE
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK--AYGALGRE 123
Query: 151 --GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
G +H V+ +GY +V + ++L+ +Y A F +
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMY----AKFNL---------------------- 157
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
E + ++FD+M ER+V +W T+I+ + ++G+ +AL LF +M + + + V
Sbjct: 158 --------FENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSV 209
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
SL A+SAC+ L L G+ IH K K L +N+AL+ MY C +E A EV
Sbjct: 210 SLTVAISACSRLLWLERGKEIH----RKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
F+ MP++S ++W +MI + +G + + I M
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 38/315 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IHT +V G+ + + L+ Y ++ +VF E+ V WN +I +S
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
K++ LF +M ++ EPN ++ + +S C+R L G+++H + + G+ + ++ +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
L+++YG +E A+ VF +M +++V WNSM
Sbjct: 249 LVDMYGKCDC---LEVAREVFQKMPRKSLVAWNSM------------------------- 280
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
I GY G + + + N+M Q +L + L AC+ +L G++IH Y
Sbjct: 281 ------IKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY 334
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGY 352
+ + I +N +LI +Y CG A VF K SW MI ++ G
Sbjct: 335 VIRSVVNAD----IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 353 ANEALAIFELMQSLG 367
+A+ +++ M S+G
Sbjct: 391 WFKAVEVYDQMVSVG 405
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM-MERNVVTWTTMIAGYARNGKC 248
QR+ R++V S++ VY C + AR +F+ + +V W ++++GY++N
Sbjct: 28 QRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMF 87
Query: 249 RQALILFNKMRRAHVDL-DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
L +F ++ + + D + + A LG LGR IHT + + SG ++++
Sbjct: 88 HDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVK--SGYVCDVVVA 145
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++L+ MYA + E + +VF MP+R SW T+I F + G A +AL +F M+S G
Sbjct: 146 --SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L +C L L QIH I +L+ LL Y G+ A ++F +
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKD 475
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V W MI + PR+++ F++M+ +P+ +T +LS C +GL+ EG +
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS 535
Query: 157 RVLVN-GYYPNVFMKTNLINLYGMAG 181
++ G P + + +I++ G AG
Sbjct: 536 QMRSKYGIEPIIEHYSCMIDILGRAG 561
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 167/328 (50%), Gaps = 41/328 (12%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
+L++C+T+ ++IH + GF Y+ A L+ Y + +A +F E+ +
Sbjct: 159 VLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS 218
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
WN MI G+ +S + ++++ L N +RA ++ +T LLS C +G G +H +
Sbjct: 219 WNAMISGYCQSGNAKEALTLSNGLRAMDS----VTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
+G +F+ LI+LY A+FG R+ D
Sbjct: 275 KHGLESELFVSNKLIDLY----AEFG-----RLRD------------------------- 300
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
+++FD+M R++++W ++I Y N + +A+ LF +MR + + D ++L++ S ++
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
LGD+R R + + K I++ NA++ MYA G+++ A VF W+P IS
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLED---ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 340 WTTMICAFAKQGYANEALAIFELMQSLG 367
W T+I +A+ G+A+EA+ ++ +M+ G
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEG 445
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 150/316 (47%), Gaps = 38/316 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH+ + HG + ++ KL+ Y G L KVF + + WN +I+ + +E
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
P +++ LF +MR + +P+ LT L S ++ G +R V G L G++
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL------- 381
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
+I N+++ +Y + G V+ AR +F+ + +V
Sbjct: 382 --------------------------EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV 415
Query: 233 VTWTTMIAGYARNGKCRQALILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
++W T+I+GYA+NG +A+ ++N M + +Q + V+ L AC++ G LR G +H
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHG 475
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+L L + + +L MY CG +E+A +F +P+ +++ W T+I G
Sbjct: 476 ----RLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 352 YANEALAIFELMQSLG 367
+ +A+ +F+ M G
Sbjct: 532 HGEKAVMLFKEMLDEG 547
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 155/326 (47%), Gaps = 46/326 (14%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
L + C L+ +H ++V+ Q I AKL++ Y G++ A F ++N V
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 100 WNQMIRGHARSESPRKSVILFNQ-MRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRV 158
WN MI G+ R+ + + + F+ M ++ P+ T+ +L C + +G ++H
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLA 176
Query: 159 LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVE 218
L G+ +V++ +LI+LY A V A+ +FDEM R++ WN+M
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKA---VGNARILFDEMPVRDMGSWNAM----------- 222
Query: 219 GARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
I+GY ++G ++AL L N +R +D V++V+ LSAC
Sbjct: 223 --------------------ISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACT 258
Query: 279 ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI 338
E GD G IH+Y + G L +S N LI +YA G + + +VF M R I
Sbjct: 259 EAGDFNRGVTIHSYSIKH--GLESELFVS--NKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 339 SWTTMICAFAKQGYANEALAIFELMQ 364
SW ++I A+ A+++F+ M+
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMR 340
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L +C L Q +H +++ +G +++ L Y G L A +F ++ +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
WN +I H K+V+LF +M +P+ +T+ LLS C+ SGL+ EG+
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 157 RVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRC 214
+ + G P++ ++++YG AG +E A + M + + W ++L+
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQ---LETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 215 GNVE 218
GNV+
Sbjct: 634 GNVD 637
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 156/335 (46%), Gaps = 47/335 (14%)
Query: 40 LLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L+SC +L Q+H + G + ++L L+S Y G + A KVF+E NP
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEE--NPQ 116
Query: 97 VT----LWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
+ +N +I G+ + + +F +M+ + +T L+ C L G
Sbjct: 117 SSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGR 176
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
+HG+ + G + + NS + +YM
Sbjct: 177 SLHGQCVKGGL----------------------------------DSEVAVLNSFITMYM 202
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
+CG+VE RR+FD+M + ++TW +I+GY++NG L L+ +M+ + V D +LV+
Sbjct: 203 KCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVS 262
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
LS+CA LG ++G + +E +G ++ +S NA I MYA CG + +A VF M
Sbjct: 263 VLSSCAHLGAKKIGHEVGKLVES--NGFVPNVFVS--NASISMYARCGNLAKARAVFDIM 318
Query: 333 PKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
P +S +SWT MI + G L +F+ M G
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 44/302 (14%)
Query: 37 LFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
+ L+ C +YL +H Q V G + +L ++ Y+ G + + ++F E+
Sbjct: 159 MLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP 218
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+ WN +I G++++ + L+ QM+++ P+ T +LS CA G + G +
Sbjct: 219 VKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE 278
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
V V NG+ PNVF+ N+ +++Y R
Sbjct: 279 VGKLVESNGFVPNVFVS----------------------------------NASISMYAR 304
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
CGN+ AR +FD M +++V+WT MI Y +G L+LF+ M + + D V
Sbjct: 305 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 274 LSACAELG--DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
LSAC+ G D L + E KL + + L+ + G ++EA E
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHY-----SCLVDLLGRAGRLDEAMEFIES 419
Query: 332 MP 333
MP
Sbjct: 420 MP 421
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 92 VKNPSV-----TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
V+N +V T WN +R A +S+ L+ M + + P+ ++ F+L CA
Sbjct: 8 VRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLS 67
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERN--IVCW 204
L G+Q+H V G F+ T LI++Y G V A++VF+E + + VC+
Sbjct: 68 LPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL---VADARKVFEENPQSSQLSVCY 124
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
N++ I+GY N K A +F +M+ V
Sbjct: 125 NAL-------------------------------ISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
+D V+++ + C L LGR +H + + G S + L N+ I MY CG +E
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHG---QCVKGGLDSEVAVL-NSFITMYMKCGSVEA 209
Query: 325 AYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+F MP + I+W +I +++ G A + L ++E M+S G
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 179/353 (50%), Gaps = 20/353 (5%)
Query: 18 LEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYI 77
+ L PA I + LQ+H+ + K +IH I+ GF I KLL ++
Sbjct: 28 VSSLSPAKYIAGA--LQEHI-----NSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHL 80
Query: 78 ASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSF 137
G L A +VF E+ P+++ +N MI G+ + ++ ++L +M + + + T S
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 138 LLSGCARSG----LLRE-GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
+L G L R VH R++ + + T L++ Y +G +E A+ V
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGK---LESARTV 197
Query: 193 FDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK-CRQA 251
F+ M + N+VC SM++ YM G VE A IF+ +++V + M+ G++R+G+ +++
Sbjct: 198 FETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRS 257
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
+ ++ M+RA + + + + AC+ L +G+ +H I + SG I + ++
Sbjct: 258 VDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMK--SGVYTH--IKMGSS 313
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
L+ MYA CG I +A VF M +++ SWT+MI + K G EAL +F M+
Sbjct: 314 LLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMK 366
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 140/277 (50%), Gaps = 39/277 (14%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS-ESPRKSVILFNQMRAAEAEP 130
++S Y+ G + A ++F K + ++N M+ G +RS E+ ++SV ++ M+ A P
Sbjct: 212 MISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHP 271
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
N+ T++ ++ C+ G+QVH +++ +G Y ++ M ++L+++Y
Sbjct: 272 NISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYA------------ 319
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+CG + ARR+FD+M E+NV +WT+MI GY +NG +
Sbjct: 320 ----------------------KCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEE 357
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
AL LF +M+ ++ + V+ + ALSAC+ G + G I ++ S K + +
Sbjct: 358 ALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK---MEHYA 414
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICA 346
++ + G + +A+E R MP+R + W ++ +
Sbjct: 415 CIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSS 451
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 9/218 (4%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H QI+ G + + LL Y G + A +VF +++ +V W MI G+ ++
Sbjct: 294 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG 353
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMK 170
+P +++ LF +M+ EPN +T+ LS C+ SGL+ +G ++ + + P +
Sbjct: 354 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 413
Query: 171 TNLINLYGMAGA-DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVE----GARRIFD 225
+++L G AG + E+A R E + +I W ++L+ GNVE A +F
Sbjct: 414 ACIVDLMGRAGDLNKAFEFA-RAMPERPDSDI--WAALLSSCNLHGNVELASIAASELFK 470
Query: 226 KMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
++ + + YA N K + M+R +
Sbjct: 471 LNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRI 508
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 159/304 (52%), Gaps = 15/304 (4%)
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
+ L+S Y G ++SA KVF E+ +V WN MI G+ + + LF ++
Sbjct: 4 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR-- 61
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
N +T+ ++ G + + + ++ R+ NV + ++ +Y + +E A
Sbjct: 62 -NTVTWIEMIKGYGKRIEIEKARELFERMPFE--LKNVKAWSVMLGVYV---NNRKMEDA 115
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
++ F+++ E+N W+ M++ Y R G+V AR IF ++ R++V W T+IAGYA+NG
Sbjct: 116 RKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSD 175
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
A+ F M+ + D V++ + LSACA+ G L +GR +H+ I + G + +S
Sbjct: 176 DAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR--GIELNQFVS-- 231
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
NALI MYA CG +E A VF + RS +MI A G EAL +F M+SL
Sbjct: 232 NALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESL--- 288
Query: 370 EAKP 373
+ KP
Sbjct: 289 DLKP 292
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 133/276 (48%), Gaps = 42/276 (15%)
Query: 64 QKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM 123
+ +++ + ++S Y G + A +F V + +WN +I G+A++ ++ F M
Sbjct: 125 KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNM 184
Query: 124 RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGAD 183
+ EP+ +T S +LS CA+SG L G +VH +LIN G+
Sbjct: 185 QGEGYEPDAVTVSSILSACAQSGRLDVGREVH----------------SLINHRGI---- 224
Query: 184 FGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYA 243
E N N+++ +Y +CG++E A +F+ + R+V +MI+ A
Sbjct: 225 --------------ELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLA 270
Query: 244 RNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
+GK ++AL +F+ M + D+++ +A L+AC G L G I + + K+Q
Sbjct: 271 IHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM------KTQD 324
Query: 304 LLISLNN--ALIHMYASCGVIEEAYEVFRWMPKRSN 337
+ ++ + LIH+ G ++EAY + + M + N
Sbjct: 325 VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPN 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
++H+ I G ++ L+ Y G L +A VF+ + SV N MI A
Sbjct: 214 EVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHG 273
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++++ +F+ M + + +P+ +T+ +L+ C G L EG ++ + PNV
Sbjct: 274 KGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFG 333
Query: 172 NLINLYGMAGADFGVEYAQRVFDEM 196
LI+L G +G ++ A R+ EM
Sbjct: 334 CLIHLLGRSGK---LKEAYRLVKEM 355
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 159/351 (45%), Gaps = 47/351 (13%)
Query: 24 ANTITTSRILQQHLFH--LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIA 78
+N + S I F+ LL+ C K L Q +H I+ F + LL+ Y
Sbjct: 48 SNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAK 107
Query: 79 SGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFL 138
G L A KVF+++ W +I G+++ + P +++ FNQM PN T S +
Sbjct: 108 CGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSV 167
Query: 139 LSGCA--RSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
+ A R G G Q+HG + G+ NV + + L++LY G ++ AQ VFD +
Sbjct: 168 IKAAAAERRGCC--GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL---MDDAQLVFDAL 222
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
RN V WN+++ AG+AR +AL LF
Sbjct: 223 ESRNDVSWNALI-------------------------------AGHARRSGTEKALELFQ 251
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMY 316
M R S + AC+ G L G+W+H Y+ + + L+ N L+ MY
Sbjct: 252 GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK----SGEKLVAFAGNTLLDMY 307
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
A G I +A ++F + KR +SW +++ A+A+ G+ EA+ FE M+ +G
Sbjct: 308 AKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 34/235 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H V GF ++ + LL Y G + A VF +++ + WN +I GHAR
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
K++ LF M P+ +Y+ L C+ +G L +G+ VH ++ +G
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE-------- 293
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
L AG N++L +Y + G++ AR+IFD++ +R+
Sbjct: 294 ---KLVAFAG-----------------------NTLLDMYAKSGSIHDARKIFDRLAKRD 327
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
VV+W +++ YA++G ++A+ F +MRR + +++S ++ L+AC+ G L G
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 12/232 (5%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L +C + +L Q +H ++ G ++ LL Y SG + A K+F +
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD 327
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V WN ++ +A+ +++V F +MR PN +++ +L+ C+ SGLL EG +
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE 387
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCG 215
+ +G P + +++L G AG + A R +EM E W ++L
Sbjct: 388 LMKKDGIVPEAWHYVTVVDLLGRAG---DLNRALRFIEEMPIEPTAAIWKALLNACRMHK 444
Query: 216 NVE----GARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
N E A +F+ + + + YA G+ A + KM+ + V
Sbjct: 445 NTELGAYAAEHVFE-LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGV 495
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 162/335 (48%), Gaps = 43/335 (12%)
Query: 34 QQHLFHLLQSCKTLKYLSQIHTQIV-IHGFSQKSYILAKLLSFYIASG---HLLSAHKVF 89
+Q +LL+ C + Q+H + + + F S+ + +L+ SG + A +F
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 90 KEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLR 149
+ + +P +N MIRG+ S +++ +N+M EP+ TY LL C R +R
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA 209
EG+Q+HG+V G +VF++ +LIN+
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINM--------------------------------- 176
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM-RRAHVDLDQV 268
Y RCG +E + +F+K+ + +W++M++ A G + L+LF M ++ ++
Sbjct: 177 -YGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+V+AL ACA G L LG IH ++ +S L I + +L+ MY CG +++A +
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNIS----ELNIIVQTSLVDMYVKCGCLDKALHI 291
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
F+ M KR+N++++ MI A G AL +F M
Sbjct: 292 FQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM 326
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 149/312 (47%), Gaps = 46/312 (14%)
Query: 40 LLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LL++C LK + QIH Q+ G ++ L++ Y G + + VF+++++ +
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAA---EAEPNLLTYSFLLSGCARSGLLREGEQ 153
W+ M+ A + ++LF M + +AE + + + L CA +G L G
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALL--ACANTGALNLGMS 255
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
+HG +L N + E NI+ S++ +Y++
Sbjct: 256 IHGFLLRN----------------------------------ISELNIIVQTSLVDMYVK 281
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
CG ++ A IF KM +RN +T++ MI+G A +G+ AL +F+KM + ++ D V V+
Sbjct: 282 CGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSV 341
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
L+AC+ G ++ GR + + E GK + L+ + G++EEA E + +P
Sbjct: 342 LNACSHSGLVKEGRRV--FAEMLKEGKVEP-TAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Query: 334 -KRSNISWTTMI 344
+++++ W T +
Sbjct: 399 IEKNDVIWRTFL 410
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
A IF + + + TMI GY +AL +N+M + + D + L AC
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
L +R G+ IH + KL ++ + + N+LI+MY CG +E + VF + ++ S
Sbjct: 145 LKSIREGKQIHGQVF-KLGLEAD---VFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 340 WTTMICAFAKQGYANEALAIFELMQS 365
W++M+ A A G +E L +F M S
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCS 226
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 59 IHGF-----SQKSYIL-AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IHGF S+ + I+ L+ Y+ G L A +F++++ + ++ MI G A
Sbjct: 256 IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGE 315
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY-PNVFMKT 171
++ +F++M EP+ + Y +L+ C+ SGL++EG +V +L G P
Sbjct: 316 GESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG 375
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLA 209
L++L G AG +E A + E+N V W + L+
Sbjct: 376 CLVDLLGRAGL---LEEALETIQSIPIEKNDVIWRTFLS 411
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 46/338 (13%)
Query: 40 LLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L C T ++ IH ++ G+ ++ + KL++ Y G +S VF + + +
Sbjct: 161 VLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRN 220
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V +I G +E + LF+ MR PN +TY L+ C+ S + EG+Q+H
Sbjct: 221 VITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHA 280
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
L+ YG+ E + ++++ +Y +CG+
Sbjct: 281 ----------------LLWKYGI------------------ESELCIESALMDMYSKCGS 306
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+E A IF+ E + V+ T ++ G A+NG +A+ F +M +A V++D + A L
Sbjct: 307 IEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGV 366
Query: 277 CAELGDLRLGRWIHT-YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
L LG+ +H+ I+ K SG + +NN LI+MY+ CG + ++ VFR MPKR
Sbjct: 367 SFIDNSLGLGKQLHSLVIKRKFSGNT-----FVNNGLINMYSKCGDLTDSQTVFRRMPKR 421
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
+ +SW +MI AFA+ G+ AL ++E M +L E KP
Sbjct: 422 NYVSWNSMIAAFARHGHGLAALKLYEEMTTL---EVKP 456
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 125/296 (42%), Gaps = 39/296 (13%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
LLS Y G L+ A K+F E+ V N + G R+ +L +M + +
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDH 155
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
T + +LS C + +H +++GY
Sbjct: 156 A-TLTIVLSVCDTPEFCLVTKMIHALAILSGY---------------------------- 186
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
++ I N ++ Y +CG R +FD M RNV+T T +I+G N
Sbjct: 187 ------DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDG 240
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
L LF+ MRR V + V+ ++AL+AC+ + G+ IH + + G L I +A
Sbjct: 241 LRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKY--GIESELCI--ESA 296
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
L+ MY+ CG IE+A+ +F + +S T ++ A+ G EA+ F M G
Sbjct: 297 LMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 136/316 (43%), Gaps = 50/316 (15%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK---EVKNPSVTLWNQMIRGHA 108
QIH + +G + I + L+ Y G + A +F+ EV S+T+ ++ G A
Sbjct: 277 QIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTV---ILVGLA 333
Query: 109 RSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF 168
++ S +++ F +M A E + S +L L G+Q+H V+ + N F
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
+ LIN+Y +CG++ ++ +F +M
Sbjct: 394 VNNGLINMYS----------------------------------KCGDLTDSQTVFRRMP 419
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
+RN V+W +MIA +AR+G AL L+ +M V V+ ++ L AC+ +G + GR
Sbjct: 420 KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRE 479
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAF 347
+ ++E + ++ +I M G+++EA +P + + W ++ A
Sbjct: 480 LLNEMKEVHGIEPRT---EHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGAC 536
Query: 348 AKQG------YANEAL 357
+ G YA E L
Sbjct: 537 SFHGDTEVGEYAAEQL 552
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 35/257 (13%)
Query: 112 SPRKSVILFNQMRAAEAEPNLLTY---SFLLSGCARSGLLRE-GEQVHGRVLVNGYYPNV 167
SP K IL Q + LL + S LLS C R G G +H ++ N
Sbjct: 23 SPSK--ILIRQSPNYQVSTFLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNP----- 75
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
E+ + V ++ +V WNS+L++Y +CG + A ++FD+M
Sbjct: 76 -------------------EFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEM 116
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
R+V++ + G+ RN + +L +M + D +L LS C + +
Sbjct: 117 PMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTK 175
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
IH LSG + IS+ N LI Y CG VF M R+ I+ T +I
Sbjct: 176 MIHAL--AILSGYDKE--ISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGL 231
Query: 348 AKQGYANEALAIFELMQ 364
+ + L +F LM+
Sbjct: 232 IENELHEDGLRLFSLMR 248
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 175/380 (46%), Gaps = 72/380 (18%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H +++ G Y++ L++ Y +G+ L A K+F E+ + WN ++ +++
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 113 PRKSVILFNQMRAAEA-------------------------------EPNLLTYSFLLSG 141
+ F+Q+ ++ EP T + +L+
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 142 CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI 201
A + + G++VH ++ G NV + +L+N+Y G A+ VFD M R+I
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM---MAKFVFDRMVVRDI 212
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM-RR 260
WN+M+A++M+ G ++ A F++M ER++VTW +MI+G+ + G +AL +F+KM R
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 261 AHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCG 320
+ + D+ +L + LSACA L L +G+ IH++I S +L NALI MY+ CG
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL----NALISMYSRCG 328
Query: 321 VIE---------------------------------EAYEVFRWMPKRSNISWTTMICAF 347
+E +A +F + R ++WT MI +
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 348 AKQGYANEALAIFELMQSLG 367
+ G EA+ +F M G
Sbjct: 389 EQHGSYGEAINLFRSMVGGG 408
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 160/296 (54%), Gaps = 11/296 (3%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEP 130
+++ ++ G + A F+++ + WN MI G + +++ +F++M R + P
Sbjct: 218 MIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+ T + +LS CA L G+Q+H ++ G+ + + LI++Y G GVE A+
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG---GVETAR 334
Query: 191 RVFDEMGERN--IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
R+ ++ G ++ I + ++L Y++ G++ A+ IF + +R+VV WT MI GY ++G
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
+A+ LF M + +L A LS + L L G+ IH + SG+ S +S+
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK--SGEIYS--VSV 450
Query: 309 NNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMICAFAKQGYANEALAIFELM 363
+NALI MYA G I A F + +R +SWT+MI A A+ G+A EAL +FE M
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 153/372 (41%), Gaps = 87/372 (23%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAK 71
+ML + L+ + T L +L +C L+ L QIH+ IV GF +L
Sbjct: 268 KMLRDSLLSPDRFT--------LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 72 LLSFY---------------------------------IASGHLLSAHKVFKEVKNPSVT 98
L+S Y I G + A +F +K+ V
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 99 LWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRV 158
W MI G+ + S +++ LF M PN T + +LS + L G+Q+HG
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 159 LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVE 218
+ +G +Y ++ + N+++ +Y + GN+
Sbjct: 440 VKSG------------EIYSVSVS----------------------NALITMYAKAGNIT 465
Query: 219 GARRIFDKM-MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
A R FD + ER+ V+WT+MI A++G +AL LF M + D ++ V SAC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN--ALIHMYASCGVIEEAYEVFRWMPKR 335
G + GR +++ ++ +L++ ++ ++ G+++EA E MP
Sbjct: 526 THAGLVNQGRQYFDMMKD-----VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 336 SN-ISWTTMICA 346
+ ++W +++ A
Sbjct: 581 PDVVTWGSLLSA 592
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 179/375 (47%), Gaps = 67/375 (17%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYL---SQIHTQIVIHG-FSQKSYILA 70
+M+LE + P +S +L +C L+ L ++H + +G + S++ +
Sbjct: 292 EMVLEGVEPDEFTISS---------VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 342
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR-AAEAE 129
L+ Y +LS +VF + + + LWN MI G++++E +++++LF M +A
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
N T + ++ C RSG E +HG V+ G
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL-------------------------- 436
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
+R+ N+++ +Y R G ++ A RIF KM +R++VTW TMI GY +
Sbjct: 437 --------DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 488
Query: 250 QALILFNKMR-----------RAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKL 297
AL+L +KM+ R + + ++L+ L +CA L L G+ IH Y I+ L
Sbjct: 489 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 548
Query: 298 SGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEAL 357
+ +++ +AL+ MYA CG ++ + +VF +P+++ I+W +I A+ G EA+
Sbjct: 549 ATD-----VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 358 AIFELM--QSLGANE 370
+ +M Q + NE
Sbjct: 604 DLLRMMMVQGVKPNE 618
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 153/361 (42%), Gaps = 53/361 (14%)
Query: 13 SYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQK-----SY 67
+++ +L+E + ++ T L ++ +C L + +H + + S+
Sbjct: 186 AFRCMLDENVEPSSFT--------LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237
Query: 68 ILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
I+ L++ Y G L S+ + + WN ++ ++E +++ +M
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP-NVFMKTNLINLYGMAGADFGV 186
EP+ T S +L C+ +LR G+++H L NG N F+ + L+++Y
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY--------- 348
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNG 246
C V RR+FD M +R + W MIAGY++N
Sbjct: 349 -------------------------CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 383
Query: 247 KCRQALILFNKMRR-AHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
++AL+LF M A + + ++ + AC G IH ++ ++ G +
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR--GLDRDRF 441
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+ N L+ MY+ G I+ A +F M R ++W TMI + + +AL + MQ+
Sbjct: 442 V--QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 366 L 366
L
Sbjct: 500 L 500
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 139/307 (45%), Gaps = 50/307 (16%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH +V G + ++ L+ Y G + A ++F ++++ + WN MI G+ SE
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486
Query: 113 PRKSVILFNQMRAAEAE-----------PNLLTYSFLLSGCARSGLLREGEQVHGRVLVN 161
+++L ++M+ E + PN +T +L CA L +G+++H + N
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN 546
Query: 162 GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGAR 221
+V + + L+++Y +CG ++ +R
Sbjct: 547 NLATDVAVGSALVDMYA----------------------------------KCGCLQMSR 572
Query: 222 RIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
++FD++ ++NV+TW +I Y +G ++A+ L M V ++V+ ++ +AC+ G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 282 DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI--S 339
+ G I ++ + S + ++ + G I+EAY++ MP+ N +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYA---CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGA 689
Query: 340 WTTMICA 346
W++++ A
Sbjct: 690 WSSLLGA 696
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 36/314 (11%)
Query: 52 QIHTQIVIHGFSQKSYILAK-LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
QIH + G+ S +A L++ Y G + +KVF + + WN +I
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
E ++ F M EP+ T +++ C+ N P M
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACS-----------------NLPMPEGLMM 220
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
++ YG+ GE N N+++A+Y + G + ++ + R
Sbjct: 221 GKQVHAYGL---------------RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
++VTW T+++ +N + +AL +M V+ D+ ++ + L AC+ L LR G+ +H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
Y + S S + S AL+ MY +C + VF M R W MI +++
Sbjct: 326 AYALKNGSLDENSFVGS---ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 351 GYANEALAIFELMQ 364
+ EAL +F M+
Sbjct: 383 EHDKEALLLFIGME 396
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 43/262 (16%)
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
W ++R RS R++V+ + M +P+ + LL A + G+Q+H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 160 VNGY-YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVE 218
GY +V + L+NLY G DFG Y +VFD + ERN V WNS+++ E
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCG-DFGAVY--KVFDRISERNQVSWNSLISSLCSFEKWE 181
Query: 219 GARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
A F M++ N V+ +LV+ ++AC+
Sbjct: 182 MALEAFRCMLDEN-------------------------------VEPSSFTLVSVVTACS 210
Query: 279 ELG---DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
L L +G+ +H Y K G+ S +I N L+ MY G + + + R
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRK--GELNSFII---NTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 336 SNISWTTMICAFAKQGYANEAL 357
++W T++ + + EAL
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEAL 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
V GA IF R+ W ++ R+ R+A++ + M + D + A L A
Sbjct: 48 VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
A+L D+ LG+ IH ++ + G +++ N L+++Y CG Y+VF + +R+
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDS---VTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 337 NISWTTMI---CAFAKQGYANEAL 357
+SW ++I C+F K A EA
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAF 187
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 37 LFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +L SC L L+ +IH + + + + + L+ Y G L + KVF ++
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+V WN +I + + ++++ L M +PN +T+ + + C+ SG++ EG +
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 154 VHGRVLVN-GYYPNVFMKTNLINLYGMAG 181
+ + + G P+ +++L G AG
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAG 668
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 38/316 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH + +G + L++ Y L A K+F + + W+ M+ G++++
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++V LF++M +A +P+ T +L+ C+ L EG+Q+H +L G+ ++F T
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
L+++Y A G + AR+ FD + ER+
Sbjct: 362 ALVDMYAKA----------------------------------GCLADARKGFDCLQERD 387
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
V WT++I+GY +N +ALIL+ +M+ A + + ++ + L AC+ L L LG+ +H
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+ + G L + + +AL MY+ CG +E+ VFR P + +SW MI + G
Sbjct: 448 HTIKHGFG----LEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNG 503
Query: 352 YANEALAIFELMQSLG 367
+EAL +FE M + G
Sbjct: 504 QGDEALELFEEMLAEG 519
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 47/345 (13%)
Query: 29 TSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKV 88
TS +L++ H Q + L +H QI+ G S L++FY G L AH +
Sbjct: 14 TSTLLKKLTHHSQQ--RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVI---LFNQMRAAEAEPNLLTYSFLLSGCARS 145
F + V WN +I G++++ S LF +MRA + PN T + + A S
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK--AES 129
Query: 146 GLLRE--GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVC 203
L G Q H V+ + ++++ T+L+ +Y AG VE +VF M ERN
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGL---VEDGLKVFAYMPERNTYT 186
Query: 204 WNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
W++M++ Y G VE A ++F+ LF + +
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFN----------------------------LFLREKEEGS 218
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVI 322
D D V A LS+ A + LGR IH I+ L G ++L+NAL+ MY+ C +
Sbjct: 219 DSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLG-----FVALSNALVTMYSKCESL 272
Query: 323 EEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
EA ++F R++I+W+ M+ +++ G + EA+ +F M S G
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 149/340 (43%), Gaps = 49/340 (14%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L +C + YL Q+H+ ++ GF + + L+ Y +G L A K F ++
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V LW +I G+ ++ +++IL+ +M+ A PN T + +L C+ L G+QVHG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ +G+ V + + L +Y G+ +E VF +++V WN+M
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGS---LEDGNLVFRRTPNKDVVSWNAM--------- 495
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
I+G + NG+ +AL LF +M ++ D V+ V +SA
Sbjct: 496 ----------------------ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
C+ G + G + + +++ + + ++ + + G ++EA E + +
Sbjct: 534 CSHKGFVERGWFYFNMMSDQIGLDPK---VDHYACMVDLLSRAGQLKEAKEFI----ESA 586
Query: 337 NIS-----WTTMICAFAKQGYANEALAIFELMQSLGANEA 371
NI W ++ A G + E + +LG+ E+
Sbjct: 587 NIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRES 626
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 166/361 (45%), Gaps = 48/361 (13%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLS 74
+M L E+ P +++T ++Q F K+LK L +H + G + + +S
Sbjct: 143 EMRLNEITP-DSVTVMTLIQSASFE-----KSLKLLEAMHAVGIRLGVDVQVTVANTWIS 196
Query: 75 FYIASGHLLSAHKVFKEVK--NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
Y G L SA VF+ + + +V WN M + ++ + L+ M E +P+L
Sbjct: 197 TYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDL 256
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
T+ L + C L +G +H + G
Sbjct: 257 STFINLAASCQNPETLTQGRLIHSHAIHLG------------------------------ 286
Query: 193 FDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQAL 252
+++I N+ +++Y + + AR +FD M R V+WT MI+GYA G +AL
Sbjct: 287 ----TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 253 ILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
LF+ M ++ D V+L++ +S C + G L G+WI + K +++I NAL
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDAR-ADIYGCKRDNVMIC--NAL 399
Query: 313 IHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
I MY+ CG I EA ++F P+++ ++WTTMI +A G EAL +F M L + K
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL---DYK 456
Query: 373 P 373
P
Sbjct: 457 P 457
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 48/325 (14%)
Query: 16 MLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKL 72
ML EE P ++T +L SC+ + L+Q IH+ + G Q +
Sbjct: 247 MLREEFKP--DLST-------FINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTF 297
Query: 73 LSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
+S Y S SA +F + + + W MI G+A +++ LF+ M + +P+L
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL 357
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
+T L+SGC + G L G+ + R ++YG
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARA----------------DIYGCK------------ 389
Query: 193 FDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQAL 252
N++ N+++ +Y +CG++ AR IFD E+ VVTWTTMIAGYA NG +AL
Sbjct: 390 -----RDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEAL 444
Query: 253 ILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
LF+KM + ++ +A L ACA G L G W + +I +++ S L + +
Sbjct: 445 KLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNISPGL--DHYSCM 501
Query: 313 IHMYASCGVIEEAYEVFRWMPKRSN 337
+ + G +EEA E+ R M + +
Sbjct: 502 VDLLGRKGKLEEALELIRNMSAKPD 526
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 40/270 (14%)
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
SV WN IR P +S++LF +M+ EPN T+ F+ CAR + E VH
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
++ + ++ +VF+ T ++++ + V+YA +VF+ M ER+ WN+ML
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNS---VDYAAKVFERMPERDATTWNAML------- 125
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
+G+ ++G +A LF +MR + D V+++ +
Sbjct: 126 ------------------------SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQ 161
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK- 334
+ + L+L +H + +L Q +++ N I Y CG ++ A VF + +
Sbjct: 162 SASFEKSLKLLEAMHA-VGIRLGVDVQ---VTVANTWISTYGKCGDLDSAKLVFEAIDRG 217
Query: 335 -RSNISWTTMICAFAKQGYANEALAIFELM 363
R+ +SW +M A++ G A +A ++ LM
Sbjct: 218 DRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 40/317 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H ++ F ++ + ++ + A KVF+ + T WN M+ G +S
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
K+ LF +MR E P+ +T L+ + L+ E +H
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHA---------------- 177
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM--ER 230
G GV+ + N+ ++ Y +CG+++ A+ +F+ + +R
Sbjct: 178 -------VGIRLGVDV-----------QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDR 219
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
VV+W +M Y+ G+ A L+ M R D + + ++C L GR IH
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
++ G Q I N I MY+ A +F M R+ +SWT MI +A++
Sbjct: 280 SHAIHL--GTDQD--IEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEK 335
Query: 351 GYANEALAIFELMQSLG 367
G +EALA+F M G
Sbjct: 336 GDMDEALALFHAMIKSG 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 221 RRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAEL 280
RR++ +V W I ++L+LF +M+R + + + ACA L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 281 GDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISW 340
D+ +H ++ + + + A + M+ C ++ A +VF MP+R +W
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSD----VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTW 121
Query: 341 TTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
M+ F + G+ ++A ++F M+ NE P
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMR---LNEITP 151
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 175/386 (45%), Gaps = 66/386 (17%)
Query: 30 SRILQQHLFHLLQSCKTLKYLSQIHTQIVIHG----FSQKS-YILAKLLSFYIASGHLLS 84
S++ + LL+SC IH ++H F++ ++ KLLS Y G +
Sbjct: 77 SKVKRSTYLKLLESCIDS---GSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIAD 133
Query: 85 AHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCAR 144
A KVF ++ ++ W+ MI ++R R+ LF M P+ + +L GCA
Sbjct: 134 ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN 193
Query: 145 SGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCW 204
G + G+ +H V+ G + + +++ +Y G +++A + F M ER+++ W
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE---LDFATKFFRRMRERDVIAW 250
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNV----VTWTTMIAGYARNGKCR----------- 249
NS+L Y + G E A + +M + + VTW +I GY + GKC
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET 310
Query: 250 ------------------------QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRL 285
QAL +F KM A V + V++++A+SAC+ L +
Sbjct: 311 FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQ 370
Query: 286 GRWIHT------YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
G +H+ +I++ L G N+L+ MY+ CG +E+A +VF + + +
Sbjct: 371 GSEVHSIAVKMGFIDDVLVG----------NSLVDMYSKCGKLEDARKVFDSVKNKDVYT 420
Query: 340 WTTMICAFAKQGYANEALAIFELMQS 365
W +MI + + GY +A +F MQ
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQD 446
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 147/312 (47%), Gaps = 47/312 (15%)
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
V W MI G + +++ +F +M A PN +T +S C+ ++ +G +VH
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER---------------- 199
+ G+ +V + +L+++Y G +E A++VFD + +
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGK---LEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 200 -------------------NIVCWNSMLAVYMRCGNVEGARRIFDKM-----MERNVVTW 235
NI+ WN+M++ Y++ G+ A +F +M ++RN TW
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 236 TTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEE 295
+IAGY +NGK +AL LF KM+ + + V++++ L ACA L ++ R IH +
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 296 KLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANE 355
++ + ++ NAL YA G IE + +F M + I+W ++I + G
Sbjct: 553 ----RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGP 608
Query: 356 ALAIFELMQSLG 367
ALA+F M++ G
Sbjct: 609 ALALFNQMKTQG 620
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 43/236 (18%)
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYY--PNVFMKTNLINLYGMAGADFGVEYAQR 191
TY LL C SG + G +H R G + P+VF++T L
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARF---GLFTEPDVFVETKL------------------ 121
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
L++Y +CG + AR++FD M ERN+ TW+ MI Y+R + R+
Sbjct: 122 ----------------LSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREV 165
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
LF M + V D L CA GD+ G+ IH+ + KL G S L +S N+
Sbjct: 166 AKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV-IKL-GMSSCLRVS--NS 221
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++ +YA CG ++ A + FR M +R I+W +++ A+ + G EA+ + + M+ G
Sbjct: 222 ILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 177/397 (44%), Gaps = 61/397 (15%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAK 71
+M L ++P N +T + + +C LK ++Q +H+ V GF +
Sbjct: 342 KMFLAGVVP-NAVT--------IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L+ Y G L A KVF VKN V WN MI G+ ++ K+ LF +M+ A PN
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 132 LLTYSFLLSGCARSGLLREGE--------QVHGRV---------LVNGYYPN-------- 166
++T++ ++SG ++G EGE + G+V ++ GY N
Sbjct: 453 IITWNTMISGYIKNG--DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 167 VFMK----------TNLINLYGMAGADFGVEYAQRVFDEMGERNI----VCWNSMLAVYM 212
+F K +++L G + + + + RN+ N++ Y
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
+ G++E +R IF M ++++TW ++I GY +G AL LFN+M+ + ++ +L +
Sbjct: 571 KSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSS 630
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN--NALIHMYASCGVIEEAYEVFR 330
+ A +G++ G+ + I ++ +L +A++++Y +EEA + +
Sbjct: 631 IILAHGLMGNVDEGKKVFYSI-----ANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQ 685
Query: 331 WMPKRSNIS-WTTMICAFAKQGYANEALAIFELMQSL 366
M +S W + + G + A+ E + SL
Sbjct: 686 EMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSL 722
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 161/392 (41%), Gaps = 85/392 (21%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
+++++++ + + +ILQ +C ++ IH+ ++ G S + +L
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQG-----CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSIL 223
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
+ Y G L A K F+ ++ V WN ++ + ++ ++V L +M P L+
Sbjct: 224 AVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN------------------ 175
T++ L+ G + G + ++ G +VF T +I+
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 176 -LYGMAGADFGVEYAQ------RVFDEMGE-----------RNIVCWNSMLAVYMRCGNV 217
L G+ + A +V ++ E +++ NS++ +Y +CG +
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
E AR++FD + ++V TW +MI GY + G C +A LF +M+ A++ + ++
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT-------- 455
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK--- 334
W N +I Y G EA ++F+ M K
Sbjct: 456 ----------W---------------------NTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 335 --RSNISWTTMICAFAKQGYANEALAIFELMQ 364
R+ +W +I + + G +EAL +F MQ
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 16/237 (6%)
Query: 37 LFHLLQSCKTL---KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
+ LL +C L K + +IH ++ + L Y SG + + +F ++
Sbjct: 527 ILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+ WN +I G+ S ++ LFNQM+ PN T S ++ G + EG++
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 154 VHGRVLVNGYY--PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAV 210
V + N Y+ P + + ++ LYG A +E A + EM + W S L
Sbjct: 647 VFYSI-ANDYHIIPALEHCSAMVYLYGRANR---LEEALQFIQEMNIQSETPIWESFLTG 702
Query: 211 YMRCGNVE----GARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
G+++ A +F + N T + + YA K ++L NK RR ++
Sbjct: 703 CRIHGDIDMAIHAAENLF-SLEPENTATESIVSQIYALGAKLGRSL-EGNKPRRDNL 757
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 161/343 (46%), Gaps = 51/343 (14%)
Query: 33 LQQHLFHLLQSCKTLKYLSQI------HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH 86
L + F L + K L ++ H ++ HGF +I + L Y + + A
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARS 145
+VF E+ P V W ++ ++++ +++ LF M R P+ T+ +L+ C
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 146 GLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWN 205
L++G+++HG+++ NG NV ++++L+++
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDM----------------------------- 309
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
Y +CG+V AR++F+ M ++N V+W+ ++ GY +NG+ +A+ +F +M +
Sbjct: 310 -----YGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EK 360
Query: 266 DQVSLVAALSACAELGDLRLGRWIH-TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
D L ACA L +RLG+ IH Y+ G + + +ALI +Y G I+
Sbjct: 361 DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN-----VIVESALIDLYGKSGCIDS 415
Query: 325 AYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
A V+ M R+ I+W M+ A A+ G EA++ F M G
Sbjct: 416 ASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 43/330 (13%)
Query: 40 LLQSC-KTLKYLS--QIHTQIVIHGFSQKSYILAKLLSFYIASGH-LLSAHKVFKEVKNP 95
LLQ+C K ++ Q H +V G + LLS Y G + +VF
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
W M+ G+ + K++ +F +M + + N T S + C+ G +R G H
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
G V+ +G+ N F+ + L LYG+ A+RVFDEM E +++C
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVD---ARRVFDEMPEPDVIC------------ 231
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAH-VDLDQVSLVAAL 274
WT +++ +++N +AL LF M R + D + L
Sbjct: 232 -------------------WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVL 272
Query: 275 SACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK 334
+AC L L+ G+ IH + G + + + ++L+ MY CG + EA +VF M K
Sbjct: 273 TACGNLRRLKQGKEIHGKLITNGIGSN----VVVESSLLDMYGKCGSVREARQVFNGMSK 328
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELMQ 364
++++SW+ ++ + + G +A+ IF M+
Sbjct: 329 KNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 40 LLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L++C L + +IH Q V G + + L+ Y SG + SA +V+ ++ +
Sbjct: 368 VLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRN 427
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ WN M+ A++ ++V FN M +P+ +++ +L+ C +G++ EG
Sbjct: 428 MITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYF- 486
Query: 157 RVLVNGYY---PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVC-WNSMLAVYM 212
VL+ Y P + +I+L G AG E A+ + + RN W +L
Sbjct: 487 -VLMAKSYGIKPGTEHYSCMIDLLGRAGL---FEEAENLLERAECRNDASLWGVLLGPC- 541
Query: 213 RCGNVEGAR---RIFDKMME 229
N + +R RI +MME
Sbjct: 542 -AANADASRVAERIAKRMME 560
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 166/323 (51%), Gaps = 11/323 (3%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H ++ GF ++ ++++Y ++ SA KVF E+ V WN MI G+++S
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 112 SPRKSVILFNQMRA-AEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
S ++ M A ++ +PN +T + C +S L G +VH +++ N ++ +
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
+I Y G+ ++YA+ +FDEM E++ V + ++++ YM G V+ A +F +M
Sbjct: 273 NAVIGFYAKCGS---LDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
+ TW MI+G +N + + F +M R + V+L + L + +L+ G+ IH
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
+ +G ++ ++ ++I YA G + A VF RS I+WT +I A+A
Sbjct: 390 AFAIR--NGADNNIYVT--TSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVH 445
Query: 351 GYANEALAIFELMQSLGANEAKP 373
G ++ A ++F+ MQ LG KP
Sbjct: 446 GDSDSACSLFDQMQCLG---TKP 465
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 152/325 (46%), Gaps = 46/325 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H +IV+ +++ +KL+SFY A VF E+ + +N ++ + E
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 112 SPRKSVILF------NQMRAAEAEPNLLTYSFL---LSGCARSGLLREGEQVHGRVLVNG 162
+ LF + + A P+ ++ S + LSGC L QVHG V+ G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 163 YYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARR 222
+ +VF+ +I Y +E A++VFDEM ER++V WNSM++ Y + G+ E ++
Sbjct: 163 FDSDVFVGNGMITYYTKCD---NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 223 IFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD 282
++ M+ + + NG V++++ AC + D
Sbjct: 220 MYKAML---------ACSDFKPNG---------------------VTVISVFQACGQSSD 249
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTT 342
L G +H +K+ + +SL NA+I YA CG ++ A +F M ++ ++++
Sbjct: 250 LIFGLEVH----KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGA 305
Query: 343 MICAFAKQGYANEALAIFELMQSLG 367
+I + G EA+A+F M+S+G
Sbjct: 306 IISGYMAHGLVKEAMALFSEMESIG 330
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 123/248 (49%), Gaps = 17/248 (6%)
Query: 44 CKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQM 103
C +L Y + ++ + S ++S Y+A G + A +F E+++ ++ WN M
Sbjct: 282 CGSLDYARALFDEMS----EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 104 IRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY 163
I G ++ + + F +M + PN +T S LL S L+ G+++H + NG
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA 397
Query: 164 YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRI 223
N+++ T++I+ Y G G AQRVFD +R+++ W +++ Y G+ + A +
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLG---AQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 224 FDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ-----VSLVAAL 274
FD+M + + VT T +++ +A +G A +F+ M + D++ +V+ L
Sbjct: 455 FDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKY-DIEPGVEHYACMVSVL 513
Query: 275 SACAELGD 282
S +L D
Sbjct: 514 SRAGKLSD 521
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 170/340 (50%), Gaps = 62/340 (18%)
Query: 39 HLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKL-LSF------YIASGHLLSAHKV--- 88
H+L SCKT ++QIH +++ G + S + ++ L+F Y+A H+
Sbjct: 10 HVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVC 69
Query: 89 ---FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARS 145
F EV++P LWN +I+ H+ + PR++++L M + + S +L C+R
Sbjct: 70 SFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRL 127
Query: 146 GLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWN 205
G ++ G Q+HG + G + ++F++ LI LY G + ++++FD M +R+ V +N
Sbjct: 128 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGC---LGLSRQMFDRMPKRDSVSYN 184
Query: 206 SMLAVYMRCGNVEGARRIFDKM-ME-RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
SM+ Y++CG + AR +FD M ME +N+++W +MI+GYA+
Sbjct: 185 SMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS----------------- 227
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
D V + + L A++ + L W N++I Y G IE
Sbjct: 228 --DGVDIASKL--FADMPEKDLISW---------------------NSMIDGYVKHGRIE 262
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+A +F MP+R ++W TMI +AK G+ + A +F+ M
Sbjct: 263 DAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQM 302
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 169/344 (49%), Gaps = 31/344 (9%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKL------LSFYIASGHLLSAHKVFKEVK 93
+L++C L + + + IHGF +K+ + + L + Y+ G L + ++F +
Sbjct: 120 VLKACSRLGF---VKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMP 176
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+N MI G+ + + LF+ M NL++++ ++SG A++ +G
Sbjct: 177 KRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMK--NLISWNSMISGYAQTS---DGVD 231
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
+ ++ + ++ ++I+ Y G +E A+ +FD M R++V W +M+ Y +
Sbjct: 232 IASKLFADMPEKDLISWNSMIDGYVKHGR---IEDAKGLFDVMPRRDVVTWATMIDGYAK 288
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM-RRAHVDLDQVSLVA 272
G V A+ +FD+M R+VV + +M+AGY +N +AL +F+ M + +H+ D +LV
Sbjct: 289 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 348
Query: 273 ALSACAELGDLRLGRWIHTYIEEK---LSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
L A A+LG L +H YI EK L GK L ALI MY+ CG I+ A VF
Sbjct: 349 VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK-------LGVALIDMYSKCGSIQHAMLVF 401
Query: 330 RWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
+ +S W MI A G A F+++ + KP
Sbjct: 402 EGIENKSIDHWNAMIGGLAIHGLGESA---FDMLLQIERLSLKP 442
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 127/300 (42%), Gaps = 41/300 (13%)
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEA 128
A ++ Y G + A +F ++ + V +N M+ G+ +++ +++ +F+ M + +
Sbjct: 280 ATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHL 339
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
P+ T +L A+ G L + +H ++ +Y G GV
Sbjct: 340 LPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY---------------LGGKLGV-- 382
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
+++ +Y +CG+++ A +F+ + +++ W MI G A +G
Sbjct: 383 -----------------ALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLG 425
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
A + ++ R + D ++ V L+AC+ G ++ G + K + + +
Sbjct: 426 ESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR---LQH 482
Query: 309 NNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMI--CAFAKQGYANEALAIFELMQS 365
++ + + G IE A + MP N + W T + C+ K+ E +A ++Q+
Sbjct: 483 YGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA 542
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 11/163 (6%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+H IV F + L+ Y G + A VF+ ++N S+ WN MI G A
Sbjct: 364 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 423
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG----EQVHGRVLVNGYYPNV 167
+ + Q+ +P+ +T+ +L+ C+ SGL++EG E + + + P +
Sbjct: 424 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE---PRL 480
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLA 209
++++ +G+ +E A+ + +EM E N V W + L
Sbjct: 481 QHYGCMVDILSRSGS---IELAKNLIEEMPVEPNDVIWRTFLT 520
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 162/338 (47%), Gaps = 53/338 (15%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIAS--GHLLSAHKVFKEVKNPSV 97
++Q C + + Q+ + + G Q S++ ++LL S G L A ++F+ + P
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 98 TLWNQMIRGHARSESPR------KSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
WN +IRG A S P +S++ + +A + LT SF L CAR+
Sbjct: 69 NDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+Q+H ++ G + + T L++ Y
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLD----------------------------------AY 154
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
+ G++ A ++FD+M R+V +W +IAG + +A+ L+ +M + +V++V
Sbjct: 155 SKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVV 214
Query: 272 AALSACAELGDLRLGRWI-HTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF- 329
AAL AC+ LGD++ G I H Y + + ++NA I MY+ CG +++AY+VF
Sbjct: 215 AALGACSHLGDVKEGENIFHGYSNDN---------VIVSNAAIDMYSKCGFVDKAYQVFE 265
Query: 330 RWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++ K+S ++W TMI FA G A+ AL IF+ ++ G
Sbjct: 266 QFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG 303
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 41/239 (17%)
Query: 50 LSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHAR 109
+ Q+H QI G S S + LL Y +G L+SA+K+F E+ V WN +I G
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 110 SESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV-HGRVLVNGYYPNVF 168
+++ L+ +M + +T L C+ G ++EGE + HG Y N
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHG-------YSN-- 238
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
N++ N+ + +Y +CG V+ A ++F++
Sbjct: 239 ------------------------------DNVIVSNAAIDMYSKCGFVDKAYQVFEQFT 268
Query: 229 -ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
+++VVTW TMI G+A +G+ +AL +F+K+ + D VS +AAL+AC G + G
Sbjct: 269 GKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 146/319 (45%), Gaps = 43/319 (13%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H Q + GF + L+ Y+ + KVF E+K +V W +I G+AR+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+ + LF +M+ +PN T++ L A G+ G QVH V+ NG
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL-------- 225
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
++ I NS++ +Y++CGNV AR +FDK ++
Sbjct: 226 --------------------------DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 259
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VVTW +MI+GYA NG +AL +F MR +V L + S + + CA L +LR +H
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 292 YIEEKLSGKSQSLLISLN--NALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAFA 348
+ + L N AL+ Y+ C + +A +F+ + N +SWT MI F
Sbjct: 320 SVVK------YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Query: 349 KQGYANEALAIFELMQSLG 367
+ EA+ +F M+ G
Sbjct: 374 QNDGKEEAVDLFSEMKRKG 392
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 146/298 (48%), Gaps = 39/298 (13%)
Query: 51 SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
S++H Q+V + + S + LL Y+ G + A KVF + + + W+ M+ G+A++
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGL-LREGEQVHGRVLVNGYYPNVFM 169
++ +F ++ +PN T+S +L+ CA + + +G+Q HG +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAI---------- 522
Query: 170 KTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
K+ L + ++ +++L +Y + GN+E A +F + E
Sbjct: 523 KSRL------------------------DSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 230 RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI 289
+++V+W +MI+GYA++G+ +AL +F +M++ V +D V+ + +AC G + G
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEG--- 615
Query: 290 HTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICA 346
Y + + + N+ ++ +Y+ G +E+A +V MP + + W T++ A
Sbjct: 616 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 157/331 (47%), Gaps = 46/331 (13%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN-P 95
+ L + K L++ Q+H +V +GF I L+ Y +L A ++FKE+
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+V W MI G +++ ++V LF++M+ PN TYS +L+ + +VH
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVH 416
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
+V+ Y + + T L++ Y G VE A +VF + +++IV W++MLA Y + G
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGK---VEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
E A+ +F ++ + + ++ + + L+
Sbjct: 474 ETEA-------------------------------AIKMFGELTKGGIKPNEFTFSSILN 502
Query: 276 ACAEL-GDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
CA + G+ H + I+ +L SL +S +AL+ MYA G IE A EVF+
Sbjct: 503 VCAATNASMGQGKQFHGFAIKSRL---DSSLCVS--SALLTMYAKKGNIESAEEVFKRQR 557
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQ 364
++ +SW +MI +A+ G A +AL +F+ M+
Sbjct: 558 EKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 38/288 (13%)
Query: 77 IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
++S L +AH +F + + ++ G +R +++ LF + E + +S
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
+L A G Q+H + + G+ +V + T+L++ Y M G++F + ++VFDEM
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTY-MKGSNF--KDGRKVFDEM 154
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
ERN+V W TT+I+GYARN + L LF
Sbjct: 155 KERNVVTW-------------------------------TTLISGYARNSMNDEVLTLFM 183
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMY 316
+M+ + + AAL AE G G +HT + + K+ I ++N+LI++Y
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT----IPVSNSLINLY 239
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
CG + +A +F +S ++W +MI +A G EAL +F M+
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 16/154 (10%)
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
A +FDK R+ ++ +++ G++R+G+ ++A LF + R +++D + L A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 280 LGDLRLGRWIHT------YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
L D GR +H ++++ +S+ +L+ Y ++ +VF M
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDD----------VSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+R+ ++WTT+I +A+ +E L +F MQ+ G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 162/352 (46%), Gaps = 51/352 (14%)
Query: 22 IPANTITTSRILQQHLFHLLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIA 78
IP N T S LL++C K+L + Q+H I I+G ++ KL+ Y A
Sbjct: 107 IPVNATTFS--------ALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTA 158
Query: 79 SGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVIL--FNQMRAAEAEPNLLTYS 136
G + A KVF E + +V WN ++RG S R +L F +MR + N+ + S
Sbjct: 159 CGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLS 218
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
+ A + LR+G + H + NG + +VF+KT+L+++Y G V A+RVFDE+
Sbjct: 219 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGK---VGLARRVFDEI 275
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
ER+IV W + MIAG A N + +AL LF
Sbjct: 276 VERDIVVWGA-------------------------------MIAGLAHNKRQWEALGLFR 304
Query: 257 KM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
M + + V L L ++ L+LG+ +H ++ L K+ +++ LI +
Sbjct: 305 TMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHV---LKSKNYVEQPFVHSGLIDL 361
Query: 316 YASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
Y CG + VF +R+ ISWT ++ +A G ++AL MQ G
Sbjct: 362 YCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG 413
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 165/356 (46%), Gaps = 50/356 (14%)
Query: 16 MLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIV-IHGFSQKSYILAKLLS 74
M+ EE I N++ + IL +L K LK ++H ++ + ++ ++ + L+
Sbjct: 306 MISEEKIYPNSVILTTILP-----VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLID 360
Query: 75 FYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHA---RSESPRKSVILFNQMRAAEAEPN 131
Y G + S +VF K + W ++ G+A R + +S++ Q P+
Sbjct: 361 LYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ---EGFRPD 417
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
++T + +L CA +++G+++H L N + PNV + T+L+ +Y G EY R
Sbjct: 418 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVP---EYPIR 474
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
+FD + +RN+ W +M+ Y+ ++ +F
Sbjct: 475 LFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVF--------------------------R 508
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
L+L +K R D V++ L+ C++L L+LG+ +H +I +K + +S+ ++
Sbjct: 509 LMLLSKHRP-----DSVTMGRVLTVCSDLKALKLGKELHGHILKK---EFESIPF-VSAR 559
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+I MY CG + A F + + +++WT +I A+ +A+ FE M S G
Sbjct: 560 IIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRG 615
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 40/330 (12%)
Query: 36 HLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
++F L+ + H + +G ++ L+ Y G + A +VF E+
Sbjct: 219 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER 278
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEA-EPNLLTYSFLLSGCARSGLLREGEQV 154
+ +W MI G A ++ +++ LF M + E PN + + +L L+ G++V
Sbjct: 279 DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 155 HGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
H VL + Y F+ + LI+LY G + +RVF +RN + W
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCG---DMASGRRVFYGSKQRNAISW--------- 386
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
T +++GYA NG+ QAL M++ D V++
Sbjct: 387 ----------------------TALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV 424
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
L CAEL ++ G+ IH Y + L + SL+ S L+ MY+ CGV E +F +
Sbjct: 425 LPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTS----LMVMYSKCGVPEYPIRLFDRLE 480
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELM 363
+R+ +WT MI + + + +F LM
Sbjct: 481 QRNVKAWTAMIDCYVENCDLRAGIEVFRLM 510
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
KNP + ++ I+ AR + ++ + + + N T+S LL C R L G+
Sbjct: 74 KNPYII--HRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGK 131
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
QVH + +NG N F++T L+++Y G+ V+ AQ+VFDE N+ WN++L
Sbjct: 132 QVHVHIRINGLESNEFLRTKLVHMYTACGS---VKDAQKVFDESTSSNVYSWNALL---- 184
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
R + G +R D L F +MR VDL+ SL
Sbjct: 185 RGTVISGKKRYQD-------------------------VLSTFTEMRELGVDLNVYSLSN 219
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
+ A LR G H + +G S+ L +L+ MY CG + A VF +
Sbjct: 220 VFKSFAGASALRQGLKTHALAIK--NGLFNSVF--LKTSLVDMYFKCGKVGLARRVFDEI 275
Query: 333 PKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+R + W MI A EAL +F M S
Sbjct: 276 VERDIVVWGAMIAGLAHNKRQWEALGLFRTMIS 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 48/293 (16%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L C L+ + Q IH + + F ++ L+ Y G ++F ++ +
Sbjct: 424 VLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRN 483
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V W MI + + R + +F M ++ P+ +T +L+ C+ L+ G+++HG
Sbjct: 484 VKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHG 543
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+L + F+ +I +YG +CG+
Sbjct: 544 HILKKEFESIPFVSARIIKMYG----------------------------------KCGD 569
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+ A FD + + +TWT +I Y N R A+ F +M + + A LS
Sbjct: 570 LRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSI 629
Query: 277 CAELGDL----RLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
C++ G + R + + S + SL+I L N CG +EEA
Sbjct: 630 CSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLN-------RCGRVEEA 675
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 16 MLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSF 75
MLL + P +++T R+L + K LK ++H I+ F ++ A+++
Sbjct: 510 MLLSKHRP-DSVTMGRVLT-----VCSDLKALKLGKELHGHILKKEFESIPFVSARIIKM 563
Query: 76 YIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
Y G L SA+ F V W +I + +E R ++ F QM + PN T+
Sbjct: 564 YGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTF 623
Query: 136 SFLLSGCARSGLLREG 151
+ +LS C+++G + E
Sbjct: 624 TAVLSICSQAGFVDEA 639
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 42/317 (13%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH + GF Y+ L+ FY G +A KVF E+ V W +I G R+
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++++ F++M + EPNL TY +L R G L G+ +HG +L +
Sbjct: 187 LYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLIL---------KRA 234
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+LI+L E G N+++ +Y++C + A R+F ++ +++
Sbjct: 235 SLISL------------------ETG-------NALIDMYVKCEQLSDAMRVFGELEKKD 269
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAH-VDLDQVSLVAALSACAELGDLRLGRWIH 290
V+W +MI+G + ++A+ LF+ M+ + + D L + LSACA LG + GRW+H
Sbjct: 270 KVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVH 329
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
YI +G I A++ MYA CG IE A E+F + ++ +W ++ A
Sbjct: 330 EYILT--AGIKWDTHI--GTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIH 385
Query: 351 GYANEALAIFELMQSLG 367
G+ E+L FE M LG
Sbjct: 386 GHGLESLRYFEEMVKLG 402
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 43/271 (15%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA-EP 130
L+ Y+ L A +VF E++ WN MI G E ++++ LF+ M+ + +P
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+ + +LS CA G + G VH +L G + + T ++++Y
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYA------------ 352
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+CG +E A IF+ + +NV TW ++ G A +G +
Sbjct: 353 ----------------------KCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLE 390
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG-RWIHTYIEEKLSGKSQSLLISLN 309
+L F +M + + V+ +AAL+AC G + G R+ H K+ + +L L
Sbjct: 391 SLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFH-----KMKSREYNLFPKLE 445
Query: 310 N--ALIHMYASCGVIEEAYEVFRWMPKRSNI 338
+ +I + G+++EA E+ + MP + ++
Sbjct: 446 HYGCMIDLLCRAGLLDEALELVKAMPVKPDV 476
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +L +C +L + +H I+ G ++I ++ Y G++ +A ++F ++
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+ +V WN ++ G A +S+ F +M +PNL+T+ L+ C +GL+ EG +
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 154 VHGRVLVNGY--YPNVFMKTNLINLYGMAG 181
++ Y +P + +I+L AG
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 155/299 (51%), Gaps = 9/299 (3%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEP 130
LL Y +G + F+++ + WN +I G++ S +V +N M R A
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+T +L + +G + G+Q+HG+V+ G+ + + + L+ +Y G + A+
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC---ISDAK 194
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+VF + +RN V +NS++ + CG +E A ++F + ME++ V+W MI G A+NG ++
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKE 253
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
A+ F +M+ + +DQ + L AC LG + G+ IH I + Q I + +
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI---IRTNFQD-HIYVGS 309
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
ALI MY C + A VF M +++ +SWT M+ + + G A EA+ IF MQ G +
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 174/343 (50%), Gaps = 18/343 (5%)
Query: 30 SRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVF 89
+R+ + L S + QIH Q++ GF + + LL Y G + A KVF
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 90 KEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLR 149
+ + + ++N ++ G ++ LF M E + ++++ ++ G A++GL +
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLAK 252
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA-DFGVEYAQRVFDEMGERNIVCWNSML 208
E + + V G + + +++ G GA + G + + + +I ++++
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
+Y +C + A+ +FD+M ++NVV+WT M+ GY + G+ +A+ +F M+R+ +D D
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGK--SQSLL--ISLNNALIHMYASCGVIEE 324
+L A+SACA + L G H GK + L+ ++++N+L+ +Y CG I++
Sbjct: 373 TLGQAISACANVSSLEEGSQFH--------GKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 325 AYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ +F M R +SWT M+ A+A+ G A E + +F+ M G
Sbjct: 425 STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 163/359 (45%), Gaps = 56/359 (15%)
Query: 33 LQQHLF-HLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKV 88
+ Q+ F +L +C L ++ QIH I+ F Y+ + L+ Y L A V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLL 148
F +K +V W M+ G+ ++ ++V +F M+ + +P+ T +S CA L
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 149 REGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
EG Q HG+ + +G V + +L+ LYG
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYG------------------------------ 417
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
+CG+++ + R+F++M R+ V+WT M++ YA+ G+ + + LF+KM + + D V
Sbjct: 418 ----KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+L +SAC+ G + G+ Y + S I + +I +++ G +EEA
Sbjct: 474 TLTGVISACSRAGLVEKGQ---RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF 530
Query: 329 FRWMPKRSN-ISWTTMICAFAKQG------YANEAL--------AIFELMQSLGANEAK 372
MP + I WTT++ A +G +A E+L A + L+ S+ A++ K
Sbjct: 531 INGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGK 589
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 40/248 (16%)
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+ +HG ++ YP F+ N+++ Y + + YA+RVFD + + N+ WN++L Y
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSS---TYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA-HVDLDQVSL 270
+ G + F+K+ +R+ VTW +I GY+ +G A+ +N M R +L +V+L
Sbjct: 83 SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYA------------- 317
+ L + G + LG+ IH + KL +S L+ S L++MYA
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQV-IKLGFESYLLVGS---PLLYMYANVGCISDAKKVFY 198
Query: 318 ------------------SCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAI 359
+CG+IE+A ++FR M K S +SW MI A+ G A EA+
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-VSWAAMIKGLAQNGLAKEAIEC 257
Query: 360 FELMQSLG 367
F M+ G
Sbjct: 258 FREMKVQG 265
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 46 TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIR 105
+L+ SQ H + + G + L++ Y G + + ++F E+ W M+
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN--GY 163
+A+ +++ LF++M +P+ +T + ++S C+R+GL+ +G Q + +++ + G
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-QRYFKLMTSEYGI 504
Query: 164 YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARR 222
P++ + +I+L+ +G +E A R + M + + W ++L+ GN+E +
Sbjct: 505 VPSIGHYSCMIDLFSRSGR---LEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561
Query: 223 IFDKMME---RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
+ ++E + +T + + YA GK L MR +V
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 181/397 (45%), Gaps = 54/397 (13%)
Query: 5 LFTVHFQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQ 64
LFT +M LIP + + + LF + K QIH + G
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPN------LFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 65 KSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR 124
+++ + Y+ G + A KVF + + V + ++ +AR + V + ++M
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 125 AAEAEPNLLTYSFLLSGCARSGLLRE---------------------------------- 150
++ E N+++++ +LSG RSG +E
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 151 -GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA 209
G +HG V+ G + + + +I++YG +G +G+ F EM E + N+ +
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF-EMMEAGVC--NAYIT 326
Query: 210 VYMRCGNVEGARRIFD----KMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
R G V+ A +F+ + ME NVV+WT++IAG A+NGK +AL LF +M+ A V
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
+ V++ + L AC + L GR H + + L + + +ALI MYA CG I
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN-----VHVGSALIDMYAKCGRINL 441
Query: 325 AYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFE 361
+ VF MP ++ + W +++ F+ G A E ++IFE
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 174/352 (49%), Gaps = 38/352 (10%)
Query: 51 SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
+Q H +I+ G YI AKL++ Y A V + + +P++ ++ +I ++
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
+ +S+ +F++M + P+ L CA + G+Q+H V+G + F++
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM--- 227
++ ++Y G + A++VFD M ++++V +++L Y R G +E RI +M
Sbjct: 155 GSMFHMYMRCGR---MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 228 -MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
+E N+V+W +++G+ R+G ++A+++F K+ DQV++ + L + + L +G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 287 RWIHTYIEEK--------------LSGKSQSL--LISLNNALIHMYASC----------- 319
R IH Y+ ++ + GKS + +ISL N M A
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 320 GVIEEAYEVFRWMPKRSN----ISWTTMICAFAKQGYANEALAIFELMQSLG 367
G++++A E+F +++ +SWT++I A+ G EAL +F MQ G
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 143/287 (49%), Gaps = 14/287 (4%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH ++ G + +++ ++ Y SGH+ +F + + + N I G +R+
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPN-VFMKT 171
K++ +F + E N+++++ +++GCA++G E ++ + V G PN V + +
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 172 NLINLYGMAGADFGVE---YAQRV--FDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
L +A G +A RV D N+ ++++ +Y +CG + ++ +F+
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLD-----NVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 227 MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
M +N+V W +++ G++ +GK ++ + +F + R + D +S + LSAC ++G G
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
+ E+ K + + + ++++ G ++EAY++ + MP
Sbjct: 509 WKYFKMMSEEYGIKPR---LEHYSCMVNLLGRAGKLQEAYDLIKEMP 552
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 167/333 (50%), Gaps = 44/333 (13%)
Query: 40 LLQSCKTLKYL--SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
+L +C +L+ L ++ VI ++ ++ ++ Y GH+ A +VF + NPSV
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
W M+ G+ +S ++ +F +MR + E N T + ++S C R ++ E QVH
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
V +G+Y + + LI++Y +G ++ +++VF+++
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSG---DIDLSEQVFEDL--------------------- 412
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
D + +N+V MI ++++ K +A+ LF +M + + D+ S+ + LS
Sbjct: 413 -------DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV- 462
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLL-ISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
L L LG+ +H Y + KS +L +++ ++L +Y+ CG +EE+Y++F+ +P +
Sbjct: 463 --LDCLNLGKQVHGY-----TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKD 515
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
N W +MI F + GY EA+ +F M G +
Sbjct: 516 NACWASMISGFNEYGYLREAIGLFSEMLDDGTS 548
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 166/350 (47%), Gaps = 45/350 (12%)
Query: 30 SRILQQHL-FHLLQSCKTLKYLSQIHTQIVIHGFSQKSYIL------AKLLSFYIASGHL 82
+R+LQ+ L C L L ++ +HG++ KS ++ + L + Y G L
Sbjct: 442 TRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSL 501
Query: 83 LSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGC 142
++K+F+ + W MI G R+++ LF++M P+ T + +L+ C
Sbjct: 502 EESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVC 561
Query: 143 ARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIV 202
+ L G+++HG L G + + + L+N+Y
Sbjct: 562 SSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYS------------------------ 597
Query: 203 CWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAH 262
+CG+++ AR+++D++ E + V+ +++I+GY+++G + +LF M +
Sbjct: 598 ----------KCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Query: 263 VDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVI 322
+D ++ + L A A + LG +H YI K+ ++ S+ ++L+ MY+ G I
Sbjct: 648 FTMDSFAISSILKAAALSDESSLGAQVHAYI-TKIGLCTEP---SVGSSLLTMYSKFGSI 703
Query: 323 EEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
++ + F + I+WT +I ++A+ G ANEAL ++ LM+ G K
Sbjct: 704 DDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDK 753
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 143/339 (42%), Gaps = 58/339 (17%)
Query: 29 TSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKV 88
T++ILQ HL +YL ++ LLS+Y SG + A K+
Sbjct: 66 TTKILQAHLLR--------RYLLPFDV-----------FLTKSLLSWYSNSGSMADAAKL 106
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLL 148
F + P V N MI G+ + +S+ F++M E N ++Y ++S C+
Sbjct: 107 FDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAP 166
Query: 149 REGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
E V + GY+ +++ LI+++ + E A +VF + N+ CWN
Sbjct: 167 LFSELVCCHTIKMGYFFYEVVESALIDVF---SKNLRFEDAYKVFRDSLSANVYCWN--- 220
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
T+IAG RN LF++M D
Sbjct: 221 ----------------------------TIIAGALRNQNYGAVFDLFHEMCVGFQKPDSY 252
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ + L+ACA L LR G+ + + + ++ + + A++ +YA CG + EA EV
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARV---IKCGAEDVFVC--TAIVDLYAKCGHMAEAMEV 307
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
F +P S +SWT M+ + K A AL IF+ M+ G
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
S+L+ Y G++ A ++FD + + +VV+ MI+GY ++ ++L F+KM +
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 266 DQVSLVAALSACAELG-----------DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
+++S + +SAC+ L +++G + + +E +ALI
Sbjct: 149 NEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE---------------SALID 193
Query: 315 MYASCGVIEEAYEVFRWMPKRSNISWTTMIC-AFAKQGYANEALAIFELMQSLGANEAKP 373
+++ E+AY+VFR + W T+I A Q Y A+F+L + KP
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYG----AVFDLFHEMCVGFQKP 249
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 84/198 (42%), Gaps = 34/198 (17%)
Query: 51 SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
+Q+H I G + + + LL+ Y G + K F ++ P + W +I +A+
Sbjct: 672 AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH 731
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
+++ ++N M+ +P+ +T+ +LS C+ GL+ E ++ N +K
Sbjct: 732 GKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY----------FHLNSMVK 781
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM-ME 229
D+G+E R + VC M+ R G + A + M ++
Sbjct: 782 ------------DYGIEPENRHY--------VC---MVDALGRSGRLREAESFINNMHIK 818
Query: 230 RNVVTWTTMIAGYARNGK 247
+ + W T++A +G+
Sbjct: 819 PDALVWGTLLAACKIHGE 836
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 48/344 (13%)
Query: 38 FHLLQSCKTLKYLSQIHTQIVIHGFSQKS-------YILAKLLSFYIASGHLLSAHKVFK 90
F L + K L +++ +IHGF +K Y+ + L+ YI G ++ A ++F
Sbjct: 42 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 101
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLR 149
E++ P + W+ M+ G ++ SP ++V F +M A++ P+ +T L+S C + R
Sbjct: 102 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 161
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA 209
G VHG V+ G+ ++ + +L+N Y + A + A +F + E++++ W++++A
Sbjct: 162 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA---FKEAVNLFKMIAEKDVISWSTVIA 218
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
Y+ +NG +AL++FN M + + +
Sbjct: 219 CYV-------------------------------QNGAAAEALLVFNDMMDDGTEPNVAT 247
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
++ L ACA DL GR H E K + ++ AL+ MY C EEAY VF
Sbjct: 248 VLCVLQACAAAHDLEQGRKTH----ELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 303
Query: 330 RWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
+P++ +SW +I F G A+ ++ F +M L N +P
Sbjct: 304 SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM--LLENNTRP 345
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 141/273 (51%), Gaps = 44/273 (16%)
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE---GEQVHG 156
WN +++ +R + + + F+ M E +P+ T L C G LRE GE +HG
Sbjct: 9 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC---GELREVNYGEMIHG 65
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
F+K ++ G+D V +S++ +Y++CG
Sbjct: 66 -----------FVKKDVT-----LGSDLYV-----------------GSSLIYMYIKCGR 92
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA-HVDLDQVSLVAALS 275
+ A R+FD++ + ++VTW++M++G+ +NG QA+ F +M A V D+V+L+ +S
Sbjct: 93 MIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVS 152
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
AC +L + RLGR +H ++ + G S L SL N+L++ YA +EA +F+ + ++
Sbjct: 153 ACTKLSNSRLGRCVHGFVIRR--GFSNDL--SLVNSLLNCYAKSRAFKEAVNLFKMIAEK 208
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
ISW+T+I + + G A EAL +F M G
Sbjct: 209 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 241
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 49/368 (13%)
Query: 12 SSYQML--LEELIPANTITTSRILQQHLFHLLQSCKTL---KYLSQIHTQIVIHGFSQKS 66
S YQ + ++ A+ +T R+ L L+ +C L + +H ++ GFS
Sbjct: 123 SPYQAVEFFRRMVMASDVTPDRVT---LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 179
Query: 67 YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAA 126
++ LL+ Y S A +FK + V W+ +I + ++ + +++++FN M
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 239
Query: 127 EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
EPN+ T +L CA + L +G + H + G V + T L+++Y F
Sbjct: 240 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC---FSP 296
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNG 246
E A VF + + +VV+W +I+G+ NG
Sbjct: 297 EEAYAVFSRIPRK-------------------------------DVVSWVALISGFTLNG 325
Query: 247 KCRQALILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
+++ F+ M + D + +V L +C+ELG L + H+Y+ K S
Sbjct: 326 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYV-IKYGFDSNPF- 383
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+ +L+ +Y+ CG + A +VF + + + WT++I + G +AL F M
Sbjct: 384 --IGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM-- 439
Query: 366 LGANEAKP 373
+ ++E KP
Sbjct: 440 VKSSEVKP 447
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 227 MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
M +R++ W T++ +R + + L F+ M R D +L AL AC EL ++ G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICA 346
IH ++++ ++ S + + ++LI+MY CG + EA +F + K ++W++M+
Sbjct: 61 EMIHGFVKKDVTLGSD---LYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSG 117
Query: 347 FAKQGYANEALAIFELM 363
F K G +A+ F M
Sbjct: 118 FEKNGSPYQAVEFFRRM 134
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 157/302 (51%), Gaps = 17/302 (5%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
+L+ Y +G + A ++F ++ + W MI G R ++++ + +M +P+
Sbjct: 499 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 558
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+ LLS ARS +G Q+HG ++ G+ F++ +I+ Y ++ ++ A +
Sbjct: 559 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSN---DIKLALQ 615
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
F+ + +I N+++A +++ G VE AR +FD+ ++++ +W MI+GYA++ + A
Sbjct: 616 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLA 675
Query: 252 LILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
L LF +M + V D +++V+ SA + LG L G+ H Y+ + +L
Sbjct: 676 LHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPND----NLTA 731
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNIS------WTTMICAFAKQGYANEALAIFELMQ 364
A+I MYA CG IE A +F + NIS W +IC A G+A AL ++ +Q
Sbjct: 732 AIIDMYAKCGSIETALNIFH---QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQ 788
Query: 365 SL 366
SL
Sbjct: 789 SL 790
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 174/401 (43%), Gaps = 66/401 (16%)
Query: 34 QQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
++ L L SC + ++ QIH +++ G YI +L+ Y L A VF+
Sbjct: 295 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 354
Query: 91 EVKNPSVTLWNQMIRGHARSES-----------PRKSVI--------------------L 119
+ +N M+ G+ RS P +S + L
Sbjct: 355 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMEL 414
Query: 120 FNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGM 179
F +MR N +T + ++S C+ G + + + + VF+ TNL+++Y +
Sbjct: 415 FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 474
Query: 180 AGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMI 239
++ A+++FDEM ERN+V WN ML Y + G +E A +FD++ E+++V+W TMI
Sbjct: 475 C---LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 531
Query: 240 AGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEK--- 296
G R + +AL+ + +M R + +V +V LSA A G +H I ++
Sbjct: 532 DGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 591
Query: 297 -----------LSGKSQSLLISLN-------------NALIHMYASCGVIEEAYEVFRWM 332
S + ++L NALI + G++E+A EVF
Sbjct: 592 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 651
Query: 333 PKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
+ SW MI +A+ AL +F M + +++ KP
Sbjct: 652 HDKDIFSWNAMISGYAQSLSPQLALHLFREM--ISSSQVKP 690
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 153/346 (44%), Gaps = 55/346 (15%)
Query: 24 ANTITTSRILQQH---------LFHLLQSCKTLKYLSQIHTQIVIHGF--SQKSYILAK- 71
A ++ +S+ LQ H + LQ+ Y ++ + F S K +I ++
Sbjct: 570 ARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRN 629
Query: 72 -LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAE 129
L++ ++ +G + A +VF + + + WN MI G+A+S SP+ ++ LF +M +++ +
Sbjct: 630 ALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVK 689
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
P+ +T + S + G L EG++ H + + PN + +I++Y
Sbjct: 690 PDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYA----------- 738
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK---MMERNVVTWTTMIAGYARNG 246
+CG++E A IF + + + W +I G A +G
Sbjct: 739 -----------------------KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHG 775
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
+ AL L++ ++ + + ++ V LSAC G + LG+ TY E S I
Sbjct: 776 HAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGK---TYFESMKSDHGIEPDI 832
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQG 351
++ + G +EEA E+ + MP ++++ W ++ A G
Sbjct: 833 KHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 878
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 17 LLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFY 76
L E+I ++ + I +F + S +L+ + H + + A ++ Y
Sbjct: 678 LFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMY 737
Query: 77 IASGHLLSAHKVFKEVKNPS---VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
G + +A +F + KN S ++ WN +I G A + ++ L++ +++ +PN +
Sbjct: 738 AKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSI 797
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
T+ +LS C +GL+ G+ + + G P++ +++L G AG +E A+ +
Sbjct: 798 TFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGR---LEEAKEM 854
Query: 193 FDEMGER-NIVCWNSMLAVYMRCGNVE 218
+M + +++ W +L+ GNVE
Sbjct: 855 IKKMPVKADVMIWGMLLSASRTHGNVE 881
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 41/150 (27%)
Query: 255 FNKMRRAHVDLD------QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
F+ R H D + +LV+AL +CA D+ GR IH + + SG + I
Sbjct: 277 FSAPSRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLK--SGLDSNGYIC- 333
Query: 309 NNALIHMYASCGVIEEAYEVFR-----------------------W--------MPKRSN 337
N++++MYA C ++ +A VFR W MP+RS
Sbjct: 334 -NSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSC 392
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+S+TT+I +A+ +EA+ +F M++LG
Sbjct: 393 VSYTTLIKGYAQNNQWSEAMELFREMRNLG 422
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 49/353 (13%)
Query: 13 SYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGF---SQKSYIL 69
S+QM+ +P N I +S + L S LK QIH ++ G ++ Y
Sbjct: 81 SFQMIF--FMPLNEIASSVV---ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYAN 135
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES-PRKSVILFNQMRAAEA 128
L+S Y+ G L A KVF ++ + +V +N + ++R+ + L M
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
+PN T++ L+ CA + G ++ +++ GY NV ++T
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQT----------------- 238
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
S+L +Y CG++E ARRIFD + R+ V W TMI G +N K
Sbjct: 239 -----------------SVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKI 281
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL-IS 307
L+ F M + VD Q + L+ C++LG LG+ IH I S SL +
Sbjct: 282 EDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII-----VSDSLADLP 336
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
L+NAL+ MY SCG + EA+ VF + + +SW ++I ++ G+ +A+ ++
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMY 389
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 177/424 (41%), Gaps = 86/424 (20%)
Query: 10 FQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYL---SQIHTQIVIHGFSQKS 66
F + M E + P ++ TS L+Q C L+ + S +++QI+ G+S
Sbjct: 184 FPLTTHMAFEYVKPNSSTFTS---------LVQVCAVLEDVLMGSSLNSQIIKLGYSDNV 234
Query: 67 YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAA 126
+ +L Y + G L SA ++F V N WN MI G +++ ++ F M +
Sbjct: 235 VVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS 294
Query: 127 EAEPNLLTYSFLLSGCAR-----------------------------------SGLLREG 151
+P TYS +L+GC++ G +RE
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
Query: 152 EQVHGRV----------LVNGYYPNVF-------------MKTNLINLYGMAGADFGVEY 188
V GR+ +++G N F M T + Y + A
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Query: 189 AQRVF---------DEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTM 238
+R ++G ER++ ++L++Y + E A+++FD M ER+VV WT M
Sbjct: 415 PERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEM 474
Query: 239 IAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLS 298
I G++R G A+ F +M R D SL + + AC+++ LR G H L+
Sbjct: 475 IVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHC-----LA 529
Query: 299 GKSQ-SLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEAL 357
++ ++S+ AL+ MY G E A +F W +M+ A+++ G +AL
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 358 AIFE 361
+ FE
Sbjct: 590 SFFE 593
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 142 CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI 201
C +L+ Q+H VL G AGA YA
Sbjct: 104 CVSITVLKRARQIHALVLTAG-----------------AGAATESPYAN----------- 135
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK-CRQALILFNKMRR 260
N+++++Y+RCG++E AR++FDKM RNVV++ + + Y+RN A L M
Sbjct: 136 ---NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 261 AHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCG 320
+V + + + + CA L D+ +G +++ I KL G S ++++ +++ MY+SCG
Sbjct: 193 EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQI-IKL-GYSDNVVV--QTSVLGMYSSCG 248
Query: 321 VIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
+E A +F + R ++W TMI K + L F M G + +
Sbjct: 249 DLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQ 300
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 95/231 (41%), Gaps = 11/231 (4%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L ++ +C + L Q H + GF + L+ Y +G +A +F
Sbjct: 506 LSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLAS 565
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
NP + WN M+ +++ K++ F Q+ P+ +TY LL+ C+ G +G+
Sbjct: 566 NPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKF 625
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAG-ADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
+ ++ G + ++NL AG D +E ++ G W ++L+ +
Sbjct: 626 LWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQ--SPPGNNQAELWRTLLSACV 683
Query: 213 RCGNVE----GARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR 259
N++ A +I K+ + T + YA NG+ + K+R
Sbjct: 684 NTRNLQIGLYAAEQIL-KLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIR 733
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 160/326 (49%), Gaps = 43/326 (13%)
Query: 41 LQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
L++C L L QIH + GF + L+ Y G + A KVF+ + + S+
Sbjct: 114 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSL 173
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAA--EAEPNLLTYSFLLSGCARSGLLREGEQVH 155
WN MI G + K++ F M+ A + P+ T + LL C+ +G++ G+Q+H
Sbjct: 174 ISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIH 233
Query: 156 GRVLVNGYY-PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRC 214
G ++ +G++ P+ T S++ +Y++C
Sbjct: 234 GFLVRSGFHCPSSATITG---------------------------------SLVDLYVKC 260
Query: 215 GNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
G + AR+ FD++ E+ +++W+++I GYA+ G+ +A+ LF +++ + +D +L + +
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 275 SACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK 334
A+ LR G+ + + SG S+L N+++ MY CG+++EA + F M
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVL----NSVVDMYLKCGLVDEAEKCFAEMQL 376
Query: 335 RSNISWTTMICAFAKQGYANEALAIF 360
+ ISWT +I + K G +++ IF
Sbjct: 377 KDVISWTVVITGYGKHGLGKKSVRIF 402
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 161/341 (47%), Gaps = 43/341 (12%)
Query: 34 QQHLFHLLQSCKTLKYLS----QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVF 89
+Q+L +L+ C T K LS Q+H ++ G L+ Y L A+KVF
Sbjct: 6 RQNLVSILRVC-TRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 90 KEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLR 149
+ +V W+ ++ GH + + S+ LF++M PN T+S L C L
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA 209
+G Q+HG L G+ E + NS++
Sbjct: 125 KGLQIHGFCLKIGF----------------------------------EMMVEVGNSLVD 150
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD--LDQ 267
+Y +CG + A ++F ++++R++++W MIAG+ G +AL F M+ A++ D+
Sbjct: 151 MYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 268 VSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYE 327
+L + L AC+ G + G+ IH ++ SG ++ +L+ +Y CG + A +
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVR--SGFHCPSSATITGSLVDLYVKCGYLFSARK 268
Query: 328 VFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
F + +++ ISW+++I +A++G EA+ +F+ +Q L +
Sbjct: 269 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Query: 200 NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR 259
N++ N ++ +Y +C A ++FD M ERNVV+W+ +++G+ NG + +L LF++M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 260 RAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASC 319
R + ++ + L AC L L G IH + + +++ + N+L+ MY+ C
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK----IGFEMMVEVGNSLVDMYSKC 155
Query: 320 GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANE 370
G I EA +VFR + RS ISW MI F GY ++AL F +MQ E
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 151/316 (47%), Gaps = 47/316 (14%)
Query: 37 LFHLLQSCKTLKYL---SQIHTQIVIHGF--SQKSYILAKLLSFYIASGHLLSAHKVFKE 91
L LL++C + + QIH +V GF + I L+ Y+ G+L SA K F +
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
+K ++ W+ +I G+A+ +++ LF +++ ++ + S ++ A LLR+G
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 152 EQVHGRV--LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA 209
+Q+ L +G +V NS++
Sbjct: 333 KQMQALAVKLPSGLETSVL------------------------------------NSVVD 356
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
+Y++CG V+ A + F +M ++V++WT +I GY ++G ++++ +F +M R +++ D+V
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
+A LSAC+ G ++ G + + + E K + + ++ + G ++EA +
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPR---VEHYACVVDLLGRAGRLKEAKHLI 473
Query: 330 RWMPKRSNIS-WTTMI 344
MP + N+ W T++
Sbjct: 474 DTMPIKPNVGIWQTLL 489
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 65 KSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR 124
++ +L ++ Y+ G + A K F E++ V W +I G+ + +KSV +F +M
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 125 AAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL-VNGYYPNVFMKTNLINLYGMAGAD 183
EP+ + Y +LS C+ SG+++EGE++ ++L +G P V +++L G AG
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR- 465
Query: 184 FGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGAR---RIFDKMMERNVVTWTTMI 239
++ A+ + D M + N+ W ++L++ G++E + +I ++ +N + M
Sbjct: 466 --LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 523
Query: 240 AGYARNG 246
Y + G
Sbjct: 524 NLYGQAG 530
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 146/331 (44%), Gaps = 42/331 (12%)
Query: 41 LQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
L +C T + + +H +V+ G I L+S Y G + + +V ++ V
Sbjct: 369 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 428
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG-LLREGEQVHG 156
WN +I G+A E P K++ F MR N +T +LS C G LL G+ +H
Sbjct: 429 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 488
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
++ G+ + +K NS++ +Y +CG+
Sbjct: 489 YIVSAGFESDEHVK----------------------------------NSLITMYAKCGD 514
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+ ++ +F+ + RN++TW M+A A +G + L L +KMR V LDQ S LSA
Sbjct: 515 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 574
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
A+L L G+ +H + KL + S + NA MY+ CG I E ++ RS
Sbjct: 575 AAKLAVLEEGQQLHG-LAVKLGFEHDSFIF---NAAADMYSKCGEIGEVVKMLPPSVNRS 630
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLG 367
SW +I A + GY E A F M +G
Sbjct: 631 LPSWNILISALGRHGYFEEVCATFHEMLEMG 661
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 163/367 (44%), Gaps = 51/367 (13%)
Query: 9 HFQSSYQML-----LEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFS 63
H + S+++ + + + T++T + H+ H K+ IH +V GF
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ-------KWGRGIHGLVVKMGFD 293
Query: 64 QKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM 123
+ LL Y +G + A+ VFK++ + WN ++ ++ L M
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 353
Query: 124 RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGAD 183
++ N +T++ L+ C +G +HG V+V+G + N + L+++YG G
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG-- 411
Query: 184 FGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYA 243
EM E +RR+ +M R+VV W +I GYA
Sbjct: 412 -----------EMSE---------------------SRRVLLQMPRRDVVAWNALIGGYA 439
Query: 244 RNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD-LRLGRWIHTYIEEKLSGKSQ 302
+ +AL F MR V + +++V+ LSAC GD L G+ +H YI +S +
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI---VSAGFE 496
Query: 303 SLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFEL 362
S + N+LI MYA CG + + ++F + R+ I+W M+ A A G+ E L +
Sbjct: 497 SDE-HVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Query: 363 MQSLGAN 369
M+S G +
Sbjct: 556 MRSFGVS 562
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 155/326 (47%), Gaps = 50/326 (15%)
Query: 51 SQIHTQIVIHGFSQKS------YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMI 104
S + +HGF KS Y+ +L Y G + + KVF+E+ + +V W ++
Sbjct: 73 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 132
Query: 105 RGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE---GEQVHGRVLVN 161
G++ P + + ++ MR N + S ++S C GLL++ G Q+ G+V+ +
Sbjct: 133 VGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKS 189
Query: 162 GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGAR 221
G + ++ +LI++ G SM GNV+ A
Sbjct: 190 GLESKLAVENSLISMLG---------------------------SM-------GNVDYAN 215
Query: 222 RIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
IFD+M ER+ ++W ++ A YA+NG ++ +F+ MRR H +++ ++ LS +
Sbjct: 216 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 275
Query: 282 DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWT 341
+ GR IH + K+ S ++ + N L+ MYA G EA VF+ MP + ISW
Sbjct: 276 HQKWGRGIHGLV-VKMGFDS---VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 331
Query: 342 TMICAFAKQGYANEALAIFELMQSLG 367
+++ +F G + +AL + M S G
Sbjct: 332 SLMASFVNDGRSLDALGLLCSMISSG 357
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 41/291 (14%)
Query: 76 YIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
Y G + A +F + + WN M+ G R + + F +M +P+
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 136 SFLLSGCARSG-LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
+ L++ C RSG + REG QVHG V +G +V++ T +++LYG+ G
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGL------------ 109
Query: 195 EMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALIL 254
V +R++F++M +RNVV+WT+++ GY+ G+ + + +
Sbjct: 110 ----------------------VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 147
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW-IHTYIEEKLSGKSQSLLISLNNALI 313
+ MR V ++ S+ +S+C L D LGR I ++ L K +++ N+LI
Sbjct: 148 YKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK-----LAVENSLI 202
Query: 314 HMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
M S G ++ A +F M +R ISW ++ A+A+ G+ E+ IF LM+
Sbjct: 203 SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 41/333 (12%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
++ SC LK S QI Q+V G K + L+S + G++ A+ +F ++
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 225
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
WN + +A++ +S +F+ MR E N T S LLS + G +HG
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
V+ G+ V + L+ +Y AGA VE A VF +M ++++ WNS++
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMY--AGAGRSVE-ANLVFKQMPTKDLISWNSLM-------- 334
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
A + +G+ AL L M + ++ V+ +AL+A
Sbjct: 335 -----------------------ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 371
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
C GR +H + +SG + +I NAL+ MY G + E+ V MP+R
Sbjct: 372 CFTPDFFEKGRILHGLV--VVSGLFYNQII--GNALVSMYGKIGEMSESRRVLLQMPRRD 427
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
++W +I +A+ ++ALA F+ M+ G +
Sbjct: 428 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
+Y + G V+ AR +FD M RN V+W TM++G R G + + F KM +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 270 LVAALSACAELGDL-RLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ + ++AC G + R G +H ++ + SG + +S A++H+Y G++ + +V
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAK--SGLLSDVYVS--TAILHLYGVYGLVSCSRKV 116
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIFELM--QSLGANE 370
F MP R+ +SWT+++ ++ +G E + I++ M + +G NE
Sbjct: 117 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE 160
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 140/343 (40%), Gaps = 46/343 (13%)
Query: 12 SSYQMLLEELIPANTITTSRILQQHLF--HLLQSCKTLKYLSQIHTQIVIHGFSQKSYIL 69
+++Q + E + +N IT +L L LL+ K L H IV GF ++
Sbjct: 449 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL------HAYIVSAGFESDEHVK 502
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
L++ Y G L S+ +F + N ++ WN M+ +A + + L ++MR+
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 562
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
+ ++S LS A+ +L EG+Q+HG + G+ + F+
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI-------------------- 602
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
+N+ +Y +CG + ++ + R++ +W +I+ R+G
Sbjct: 603 --------------FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 648
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
+ F++M + V+ V+ L+AC+ G + G + I + I
Sbjct: 649 EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA---IEHC 705
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAFAKQG 351
+I + G + EA MP + N + W +++ + G
Sbjct: 706 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHG 748
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 150/328 (45%), Gaps = 41/328 (12%)
Query: 46 TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIR 105
+ +H QI+ + + LL Y G + A KVF E+ V W+ MI
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP 165
++ ++V LF +MR A PN T S +L+GCA GEQ+HG V+ G+
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 166 NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFD 225
++++ N+++ VY +C ++ A ++F
Sbjct: 382 DIYVS----------------------------------NALIDVYAKCEKMDTAVKLFA 407
Query: 226 KMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRL 285
++ +N V+W T+I GY G+ +A +F + R V + +V+ +AL ACA L + L
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 286 GRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMIC 345
G +H + + K ++++N+LI MYA CG I+ A VF M SW +I
Sbjct: 468 GVQVHGLAIKTNNAKK----VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 346 AFAKQGYANEALAIFELMQSLGANEAKP 373
++ G +AL I ++M+ + KP
Sbjct: 524 GYSTHGLGRQALRILDIMKD---RDCKP 548
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 42/332 (12%)
Query: 33 LQQHLF----HLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKV 88
L H+F L S + +H+ IV G+ +++ A L++ Y G + SA V
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLL 148
F+ + + +W ++ + + S+ L + MR A PN T+ L G
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 149 REGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
+ VHG++L Y + + L+ LY G + A +VF+EM + ++V W+ M
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLG---DMSDAFKVFNEMPKNDVVPWSFM- 319
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
IA + +NG C +A+ LF +MR A V ++
Sbjct: 320 ------------------------------IARFCQNGFCNEAVDLFIRMREAFVVPNEF 349
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+L + L+ CA LG +H + + L I ++NALI +YA C ++ A ++
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVK----VGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
F + ++ +SW T+I + G +A ++F
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMF 437
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 12/248 (4%)
Query: 19 EELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIA 78
E + N T S IL + C L Q+H +V GF Y+ L+ Y
Sbjct: 341 EAFVVPNEFTLSSILNGCA---IGKCSGLG--EQLHGLVVKVGFDLDIYVSNALIDVYAK 395
Query: 79 SGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFL 138
+ +A K+F E+ + + WN +I G+ K+ +F + + +T+S
Sbjct: 396 CEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSA 455
Query: 139 LSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGE 198
L CA + G QVHG + V + +LI++Y G +++AQ VF+EM
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCG---DIKFAQSVFNEMET 512
Query: 199 RNIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALIL 254
++ WN++++ Y G A RI D M +R N +T+ +++G + G Q
Sbjct: 513 IDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQEC 572
Query: 255 FNKMRRAH 262
F M R H
Sbjct: 573 FESMIRDH 580
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 128/312 (41%), Gaps = 42/312 (13%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH I+ G + LL+ Y+ +G A +F E+ + + + +G+A +
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-CQD 129
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
P + L++++ E N ++ L +H ++ GY N F+
Sbjct: 130 P---IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
LIN Y + CG+V+ AR +F+ ++ +++
Sbjct: 187 LINAYSV----------------------------------CGSVDSARTVFEGILCKDI 212
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
V W +++ Y NG +L L + MR A + + AL A LG + +H
Sbjct: 213 VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQ 272
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGY 352
I + L + L+ +Y G + +A++VF MPK + W+ MI F + G+
Sbjct: 273 ILK----TCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 353 ANEALAIFELMQ 364
NEA+ +F M+
Sbjct: 329 CNEAVDLFIRMR 340
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 103/196 (52%), Gaps = 8/196 (4%)
Query: 41 LQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
L +C +L + Q+H + ++K + L+ Y G + A VF E++ V
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
WN +I G++ R+++ + + M+ + +PN LT+ +LSGC+ +GL+ +G++
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES 575
Query: 158 VLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCG 215
++ + G P + T ++ L G +G ++ A ++ + + E +++ W +ML+ M
Sbjct: 576 MIRDHGIEPCLEHYTCMVRLLGRSGQ---LDKAMKLIEGIPYEPSVMIWRAMLSASMNQN 632
Query: 216 NVEGARRIFDKMMERN 231
N E ARR +++++ N
Sbjct: 633 NEEFARRSAEEILKIN 648
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
N +L Y++ G + A +FD+M ERN V++ T+ GYA C+ + L++++ R +
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHE 143
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
L+ + L L + W+H+ I KL S + + ALI+ Y+ CG ++
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIV-KLGYDSNAFV---GAALINAYSVCGSVDS 199
Query: 325 AYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
A VF + + + W ++ + + GY ++L + M+ G
Sbjct: 200 ARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 153/312 (49%), Gaps = 36/312 (11%)
Query: 51 SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
S +H + G S + L++ Y +L SA VF +++ + WN ++ +
Sbjct: 208 SMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLAN 267
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
PRKS+ F M + E + +T+S ++S C+ L GE +HG V+ +GY P
Sbjct: 268 GHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSP----- 322
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
E ++ NS++++Y +CG+ E A +F++++ R
Sbjct: 323 ---------------------------EAHVSVGNSIISMYSKCGDTEAAETVFEELVCR 355
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAH-VDLDQVSLVAALSACAELGDLRLGRWI 289
+V++ ++ G+A NG +A + N+M+ + D ++V+ S C +L R GR +
Sbjct: 356 DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAV 415
Query: 290 HTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAK 349
H Y + + QS + + N++I MY CG+ +A +F+ R +SW +MI AF++
Sbjct: 416 HGYT---VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQ 472
Query: 350 QGYANEALAIFE 361
G+ ++A +F+
Sbjct: 473 NGFTHKAKNLFK 484
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 147/343 (42%), Gaps = 42/343 (12%)
Query: 30 SRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYIL------AKLLSFYIASGHLL 83
+R ++ L ++ ++ T +H F+ K +L +KLL+FY +G L+
Sbjct: 80 NRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELV 139
Query: 84 SAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA 143
S+ +F E+K V +WN MI ++ +V LF +M E + T S +
Sbjct: 140 SSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALS 199
Query: 144 RSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVC 203
L R+ +H + G + + L+NLY GE
Sbjct: 200 SLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAK-----------------GE----- 237
Query: 204 WNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
N+ A +F M R++V+W T++ NG R++L F M +
Sbjct: 238 ------------NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
+ D V+ +SAC+ + +L LG +H + + SG S +S+ N++I MY+ CG E
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIK--SGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSL 366
A VF + R IS ++ FA G EA I MQS+
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 120/242 (49%), Gaps = 19/242 (7%)
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGM--AGADFGVEY 188
+L +++ ++SGCA SG E + + G ++ +LI L G A + G+
Sbjct: 544 DLTSWNSVISGCASSGHHLESLRAFQAMSREGK-----IRHDLITLLGTISASGNLGLVL 598
Query: 189 AQRVFDEMG-----ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYA 243
R F + E + N+++ +Y RC ++E A ++F + + N+ +W +I+ +
Sbjct: 599 QGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALS 658
Query: 244 RNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
+N R+ LF ++ ++ ++++ V LSA +LG G H ++ + G +
Sbjct: 659 QNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR--GFQAN 713
Query: 304 LLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+S AL+ MY+SCG++E +VFR S +W ++I A G +A+ +F+ +
Sbjct: 714 PFVSA--ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKEL 771
Query: 364 QS 365
S
Sbjct: 772 SS 773
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 144/336 (42%), Gaps = 63/336 (18%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILA--KLLSFYIASGHLLSAHKVFKEVKN 94
++ +C +++ L+ +H ++ G+S ++++ ++S Y G +A VF+E+
Sbjct: 295 VISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC 354
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA-EPNLLTYSFLLSGCARSGLLREGEQ 153
V N ++ G A + ++ + NQM++ + +P++ T + S C REG
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
VHG Y R+ EM R + NS++ +Y +
Sbjct: 415 VHG-------------------------------YTVRM--EMQSRALEVINSVIDMYGK 441
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAH--VDLDQVSLV 271
CG A +F R++V+W +MI+ +++NG +A LF ++ + +++
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVL 501
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
A L++C L G+ +H ++++ L L +A + + E E
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQK---------LGDLTSAFLRL-------ETMSET--- 542
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
R SW ++I A G+ E+L F+ M G
Sbjct: 543 ---RDLTSWNSVISGCASSGHHLESLRAFQAMSREG 575
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 147/343 (42%), Gaps = 59/343 (17%)
Query: 32 ILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKE 91
+LQ FH L +K L ++ TQ+ Q + L++ Y + SA KVF
Sbjct: 597 VLQGRCFHGL----AIKSLRELDTQL------QNT-----LITMYGRCKDIESAVKVFGL 641
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
+ +P++ WN +I +++++ R+ LF ++ EPN +T+ LLS + G G
Sbjct: 642 ISDPNLCSWNCVISALSQNKAGREVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYG 698
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
Q H ++ G+ N F+ L+++Y G +E +VF G +I WNS
Sbjct: 699 MQAHCHLIRRGFQANPFVSAALVDMYSSCGM---LETGMKVFRNSGVNSISAWNS----- 750
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM-RRAHVDLDQVSL 270
+I+ + +G +A+ LF ++ + ++ ++ S
Sbjct: 751 --------------------------VISAHGFHGMGEKAMELFKELSSNSEMEPNKSSF 784
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
++ LSAC+ G + G + +EEK K + ++ M G + EAYE
Sbjct: 785 ISLLSACSHSGFIDEGLSYYKQMEEKFGVKP---VTEHRVWIVDMLGRAGKLREAYEFIT 841
Query: 331 WM--PKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEA 371
+ P+++ + W ++ A G + E++ + + A
Sbjct: 842 GIGEPQKAGV-WGALLSACNYHGDTKLGKEVAEVLFEMEPDNA 883
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 199 RNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM 258
+++ + +L Y R G + + +FD++ E++V+ W +MI +NG+ A+ LF +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 259 RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYA 317
+ D +L+ A SA + L R +H IE L G S SL NAL+++YA
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS-----SLCNALMNLYA 234
Query: 318 SCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ A VF M R +SW T++ G+ ++L F+ M G
Sbjct: 235 KGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 162/325 (49%), Gaps = 16/325 (4%)
Query: 40 LLQSCKTLK-YLS--QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LL +C ++ +L+ Q+H + G S ++ KL++FY A A + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
WN +I +A++E + + + +M + P+ TY +L C + + G VHG
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ V+ Y ++++ LI++Y + G+ A+R+FD M ER+ V WN+++ Y G
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRF-RNMGI--ARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 217 VEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
A +FDKM +E +V+TW + G + G AL L ++MR LD V+++
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 273 ALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
L AC+ +G +RLG+ IH I G + ++ N LI MY+ C + A VFR
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDG-----IDNVRNTLITMYSKCKDLRHALIVFRQ 340
Query: 332 MPKRSNISWTTMICAFAKQGYANEA 356
+ S +W ++I +A+ + EA
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEA 365
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 172/367 (46%), Gaps = 28/367 (7%)
Query: 17 LLEELIPANTITTSRILQQHLF---HLLQSC-KTLK--YLSQIHTQIVIHGFSQKSYILA 70
L EE+I A S+ ++ F +L++C +TL + +H I + + Y+
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
L+S Y ++ A ++F + WN +I +A ++ LF++M + E
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY--YPNVFMKTNLI------NLYGMA-- 180
+++T++ + GC L+ G V L++ +P +I +L G
Sbjct: 244 SVITWNIISGGC-----LQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRL 298
Query: 181 GADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIA 240
G + +D G N+ N+++ +Y +C ++ A +F + E ++ TW ++I+
Sbjct: 299 GKEIHGLAIHSSYD--GIDNVR--NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIIS 354
Query: 241 GYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGK 300
GYA+ K +A L +M A + ++L + L CA + +L+ G+ H YI + K
Sbjct: 355 GYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFK 414
Query: 301 SQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
++L N+L+ +YA G I A +V M KR +++T++I + QG ALA+F
Sbjct: 415 DYTMLW---NSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 361 ELMQSLG 367
+ M G
Sbjct: 472 KEMTRSG 478
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 47/301 (15%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+IH + + + L++ Y L A VF++ + S+ WN +I G+A+
Sbjct: 301 EIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLN 360
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++ L +M A +PN +T + +L CAR L+ G++ H +L + + M
Sbjct: 361 KSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM-- 418
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
WNS++ VY + G + A+++ D M +R+
Sbjct: 419 -------------------------------LWNSLVDVYAKSGKIVAAKQVSDLMSKRD 447
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VT+T++I GY G+ AL LF +M R+ + D V++VA LSAC+ + +H
Sbjct: 448 EVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSH------SKLVHE 501
Query: 292 YIEEKLSGKSQS-----LLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMIC 345
E+L K Q + + ++ +Y G + +A ++ MP K S +W T++
Sbjct: 502 --GERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLN 559
Query: 346 A 346
A
Sbjct: 560 A 560
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 38/316 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH V G ++ Y + A K+F E+ ++ WN I
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
PR+++ F + R + PN +T+ L+ C+ L G Q+HG VL +G+ +V +
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
LI+ YG +C + + IF +M +N
Sbjct: 249 GLIDFYG----------------------------------KCKQIRSSEIIFTEMGTKN 274
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
V+W +++A Y +N + +A +L+ + R+ V+ + + LSACA + L LGR IH
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+ + ++ I + +AL+ MY CG IE++ + F MP+++ ++ ++I +A QG
Sbjct: 335 HAVKACVERT----IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 390
Query: 352 YANEALAIFELMQSLG 367
+ ALA+FE M G
Sbjct: 391 QVDMALALFEEMAPRG 406
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
N ++ +Y + + E AR + RNVV+WT++I+G A+NG AL+ F +MRR V
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL-ISLNNALIHMYASCGVIE 323
+ + A A A L G+ IH L+ K +L + + + MY + +
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHA-----LAVKCGRILDVFVGCSAFDMYCKTRLRD 160
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
+A ++F +P+R+ +W I G EA+ F
Sbjct: 161 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 147/272 (54%), Gaps = 12/272 (4%)
Query: 99 LWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRV 158
++N +IR + + + S+ LF M A+ +PN LT+ L+ S + G +HG+
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 159 LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVE 218
L G+ + F++T+ + YG G +E ++++FD++ +V NS+L R G ++
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVG---DLESSRKMFDDILNPCVVACNSLLDACGRNGEMD 169
Query: 219 GARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM---RRAHVDLDQVSLVAALS 275
A F +M +VV+WTT+I G+++ G +AL++F +M RA + ++ + V+ LS
Sbjct: 170 YAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLS 229
Query: 276 ACAEL--GDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
+CA G +RLG+ IH Y+ K L +L AL+ MY G +E A +F +
Sbjct: 230 SCANFDQGGIRLGKQIHGYVMS----KEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+ +W +I A A G +AL +FE+M+S
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMKS 317
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 70/277 (25%)
Query: 46 TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP---------- 95
++ Y +H Q + GF ++ + FY G L S+ K+F ++ NP
Sbjct: 101 SVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLD 160
Query: 96 ---------------------SVTLWNQMIRGHARSESPRKSVILFNQM---RAAEAEPN 131
V W +I G ++ K++++F +M A PN
Sbjct: 161 ACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPN 220
Query: 132 LLTYSFLLSGCAR--SGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
T+ +LS CA G +R G+Q+HG V+ + T L+++YG AG
Sbjct: 221 EATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAG-------- 272
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
++E A IFD++ ++ V W +I+ A NG+ +
Sbjct: 273 --------------------------DLEMALTIFDQIRDKKVCAWNAIISALASNGRPK 306
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
QAL +F M+ ++V + ++L+A L+ACA + LG
Sbjct: 307 QALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 59 IHGFSQKSYILAKLL------SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IHG+ I+ Y +G L A +F ++++ V WN +I A +
Sbjct: 245 IHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGR 304
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRV 158
P++++ +F M+++ PN +T +L+ CARS L+ G Q+ +
Sbjct: 305 PKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 168/330 (50%), Gaps = 49/330 (14%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
++S Y+ S L A +F+E+ +V WN MI G+A+S K++ LF++M E N
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERN 170
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+++++ ++ + G + E + R+ +V T +++ G V+ A+R
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGK---VDEARR 223
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIF--------------------------- 224
+FD M ERNI+ WN+M+ Y + ++ A ++F
Sbjct: 224 LFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
Query: 225 ----DKMMERNVVTWTTMIAGYARNGKCRQALILFNKM-RRAHVDLDQVSLVAALSACAE 279
D+M E+NV++WTTMI GY N + +AL +F+KM R V + + V+ LSAC++
Sbjct: 284 CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR--WMPKRSN 337
L L G+ IH I + + K++ + +AL++MY+ G + A ++F + +R
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNE----IVTSALLNMYSKSGELIAARKMFDNGLVCQRDL 399
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
ISW +MI +A G+ EA+ ++ M+ G
Sbjct: 400 ISWNSMIAVYAHHGHGKEAIEMYNQMRKHG 429
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 134/284 (47%), Gaps = 53/284 (18%)
Query: 80 GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
G + A K+F + V W +I G+ + R++ LF+++ ++ N++T++ ++
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMV 116
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
SG RS L E + + NV +I+ Y +G ++ A +FDEM ER
Sbjct: 117 SGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGR---IDKALELFDEMPER 169
Query: 200 NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR 259
NIV WNSM+ ++ G ++ A +F++M R+VV+WT M+ G A+NGK +A LF+ M
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP 229
Query: 260 RAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASC 319
++ IS NA+I YA
Sbjct: 230 ERNI------------------------------------------ISW-NAMITGYAQN 246
Query: 320 GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
I+EA ++F+ MP+R SW TMI F + N+A +F+ M
Sbjct: 247 NRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR-RAHVDLDQVSLV 271
+ G + AR++FD + ER+VVTWT +I GY + G R+A LF+++ R +V V+
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNV----VTWT 113
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
A +S L + + + E+ ++S N +I YA G I++A E+F
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPER-------NVVSW-NTMIDGYAQSGRIDKALELFDE 165
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELM 363
MP+R+ +SW +M+ A ++G +EA+ +FE M
Sbjct: 166 MPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 116/219 (52%), Gaps = 8/219 (3%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
+++ Y + + A ++F+ + WN MI G R+ K+ LF++M E N
Sbjct: 239 MITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM----PEKN 294
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNG-YYPNVFMKTNLIN-LYGMAGADFGVEYA 189
+++++ +++G + E V ++L +G PNV ++++ +AG G +
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM--ERNVVTWTTMIAGYARNGK 247
Q + + ++N + +++L +Y + G + AR++FD + +R++++W +MIA YA +G
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
++A+ ++N+MR+ V+ + L AC+ G + G
Sbjct: 415 GKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 40 LLQSCKTLKYL---SQIHTQIVIHGFSQKSYIL-AKLLSFYIASGHLLSAHKVFKE--VK 93
+L +C L L QIH Q++ QK+ I+ + LL+ Y SG L++A K+F V
Sbjct: 337 ILSACSDLAGLVEGQQIH-QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVC 395
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+ WN MI +A ++++ ++NQMR +P+ +TY LL C+ +GL+ +G +
Sbjct: 396 QRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGME 455
Query: 154 VHGRVLVNGYYP-NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
++ + P T L++L G AG V D R+ + ++L+
Sbjct: 456 FFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSF--YGAILSACN 513
Query: 213 RCGNVEGARRIFDKMME---RNVVTWTTMIAGYARNGKCRQALILFNKMR 259
V A+ + K++E + T+ M YA NGK +A + KM+
Sbjct: 514 VHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMK 563
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 168/333 (50%), Gaps = 15/333 (4%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
+L C ++ Q+H + GF + Y+ L+S Y G + A ++F++V + SV
Sbjct: 138 VLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVT 197
Query: 100 WNQMIRGHARSESPRKSVILFNQMRA-AEAEPNLLTYSFLLSGCARSGLLREGEQVHGRV 158
+N I G + +FN MR + EPN +T+ ++ CA L+ G Q+HG V
Sbjct: 198 YNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLV 257
Query: 159 LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGE-RNIVCWNSMLAVYMRCGNV 217
+ + + T LI++Y + A VF E+ + RN++ WNS+++ M G
Sbjct: 258 MKKEFQFETMVGTALIDMYSKCRC---WKSAYIVFTELKDTRNLISWNSVISGMMINGQH 314
Query: 218 EGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
E A +F+K+ ++ + TW ++I+G+++ GK +A F +M + L +
Sbjct: 315 ETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSL 374
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF-RWM 332
LSAC+++ L+ G+ IH ++ + + + +L SL I MY CG+ A +F R+
Sbjct: 375 LSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSL----IDMYMKCGLSSWARRIFDRFE 430
Query: 333 PK-RSNISWTTMICAFAKQGYANEALAIFELMQ 364
PK + + W MI + K G A+ IFEL++
Sbjct: 431 PKPKDPVFWNVMISGYGKHGECESAIEIFELLR 463
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 147/333 (44%), Gaps = 46/333 (13%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LL+SC L + Q +H Q+V GF + L+S Y+ + A KV E+
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERG 96
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ N + G + R + +F R + + N +T + +L GC G + G Q+H
Sbjct: 97 IASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHC 153
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ +G+ V++ T+L+++Y RCG
Sbjct: 154 LAMKSGFEMEVYVGTSLVSMYS----------------------------------RCGE 179
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRR-AHVDLDQVSLVAALS 275
A R+F+K+ ++VVT+ I+G NG +FN MR+ + + + V+ V A++
Sbjct: 180 WVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAIT 239
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
ACA L +L+ GR +H + + K + ALI MY+ C + AY VF +
Sbjct: 240 ACASLLNLQYGRQLHGLVMK----KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDT 295
Query: 336 SN-ISWTTMICAFAKQGYANEALAIFELMQSLG 367
N ISW ++I G A+ +FE + S G
Sbjct: 296 RNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 15/294 (5%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP-SVTLWNQMIR 105
L+Y Q+H ++ F ++ + L+ Y SA+ VF E+K+ ++ WN +I
Sbjct: 247 LQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVIS 306
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP 165
G + +V LF ++ + +P+ T++ L+SG ++ G + E + R+L P
Sbjct: 307 GMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVP 366
Query: 166 NVFMKTNLINLYGMAGADF-----GVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGA 220
++ T+L++ A +D G E V ER+I S++ +YM+CG A
Sbjct: 367 SLKCLTSLLS----ACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWA 422
Query: 221 RRIFDKM--MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
RRIFD+ ++ V W MI+GY ++G+C A+ +F +R V+ + A LSAC+
Sbjct: 423 RRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 482
Query: 279 ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
G++ G I ++E+ K + I +I + G + EA EV M
Sbjct: 483 HCGNVEKGSQIFRLMQEEYGYKPSTEHI---GCMIDLLGRSGRLREAKEVIDQM 533
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
PN T+ LL CA+ G + +G +H +V+ G++ +VF T L+++Y
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMY------------ 76
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
M+ V A ++ D+M ER + + ++G NG CR
Sbjct: 77 ----------------------MKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCR 114
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQ-SLLISL 308
A +F R + ++ V++ + L C GD+ G +H L+ KS + + +
Sbjct: 115 DAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHC-----LAMKSGFEMEVYV 166
Query: 309 NNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
+L+ MY+ CG A +F +P +S +++ I + G N ++F LM+ +
Sbjct: 167 GTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSS 226
Query: 369 NE 370
E
Sbjct: 227 EE 228
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 161/337 (47%), Gaps = 18/337 (5%)
Query: 30 SRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILA-KLLSFY--IASGHLLSAH 86
S++L L LQ C L+ Q+H Q+V++ ++ IL + L F + +
Sbjct: 268 SQMLDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVK 327
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
++ K W ++R ++ +++V ++ M + P+ + +L C +
Sbjct: 328 RILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKME 387
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS 206
+ +G+ +H + L NG V+++T L+ LY G +E A++ FD++ E+N V WNS
Sbjct: 388 NMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGY---IELAKKAFDDIAEKNTVSWNS 444
Query: 207 MLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
+L Y+ G ++ ARR+FDK+ E++ V+W +I+ YA+ G A LF+ M
Sbjct: 445 LLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASW 504
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+ L+ C E ++L R TY + S + +I Y G ++ A
Sbjct: 505 NI-LIGGYVNCRE---MKLAR---TYFDAMPQKNGVSWI-----TMISGYTKLGDVQSAE 552
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
E+FR M K+ + + MI + + G +AL +F M
Sbjct: 553 ELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM 589
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 43/279 (15%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM--RAAEAE 129
++S Y G + SA ++F+ + +++ MI + ++ P+ ++ LF QM R + +
Sbjct: 538 MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ 597
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
P+ +T S ++S ++ G G V + +G + + T+LI+LY
Sbjct: 598 PDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLY------------ 645
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
M+ G+ A ++F + +++ V+++ MI G NG
Sbjct: 646 ----------------------MKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 683
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG-RWIHTYIEEKLSGKSQSLLISL 308
+A LF M + + V+ LSA + G ++ G + ++ + L + I
Sbjct: 684 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGI-- 741
Query: 309 NNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICA 346
++ M G +EEAYE+ + MP + N W ++ A
Sbjct: 742 ---MVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLA 777
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+ + I HG + L+ Y+ G A K+F + ++ MI G +
Sbjct: 622 VESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGM 681
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
++ LF M + PN++T++ LLS + SGL++EG + + + P+
Sbjct: 682 ATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGI 741
Query: 173 LINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVE 218
++++ G AG +E A + M + N W ++L NVE
Sbjct: 742 MVDMLGRAGR---LEEAYELIKSMPMQPNAGVWGALLLASGLHNNVE 785
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 111/182 (60%), Gaps = 6/182 (3%)
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
A +VFDEM ERN V WN M+ G+ E A +KM R VV+WTT+I GYAR K
Sbjct: 11 AHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKP 70
Query: 249 RQALILFNKMRRAH-VDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
++A++LF++M + ++++++A L A LGDL++ +H Y+ ++ I
Sbjct: 71 KEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD---IR 127
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMP--KRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+ N+LI YA CG I+ A++ F +P +++ +SWTTMI AFA G EA+++F+ M+
Sbjct: 128 VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER 187
Query: 366 LG 367
LG
Sbjct: 188 LG 189
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 67/240 (27%)
Query: 76 YIASGHLLSAHKVFKEV--KNP-----------------------------SVTLWNQMI 104
Y+ G+++ AHKVF E+ +NP +V W +I
Sbjct: 2 YLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTII 61
Query: 105 RGHARSESPRKSVILFNQMRAAEA-EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY 163
G+AR + P+++++LF++M A +A +PN +T +L G L+ VH V G+
Sbjct: 62 DGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGF 121
Query: 164 YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRI 223
P +I NS++ Y +CG ++ A +
Sbjct: 122 VPC---------------------------------DIRVTNSLIDAYAKCGCIQSAFKF 148
Query: 224 FDKMM--ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
F ++ +N+V+WTTMI+ +A +G ++A+ +F M R + ++V++++ L+AC+ G
Sbjct: 149 FIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 208
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 9/220 (4%)
Query: 16 MLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSY-ILAKLLS 74
+L ++ + I + I + + + LK +H + GF + L+
Sbjct: 75 LLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLID 134
Query: 75 FYIASGHLLSAHKVFKEVKNPSVTL--WNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
Y G + SA K F E+ N L W MI A +++V +F M +PN
Sbjct: 135 AYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNR 194
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGY--YPNVFMKTNLINLYGMAGADFGVEYAQ 190
+T +L+ C+ GL E +VN Y P+V L+++ G +E A+
Sbjct: 195 VTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGR---LEEAE 251
Query: 191 RVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
++ E+ E V W +L + E A R+ K+ME
Sbjct: 252 KIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 291
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 178/377 (47%), Gaps = 59/377 (15%)
Query: 34 QQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH---KVFK 90
+ H L+ +CK L +H QI+ G S + A+L+S S L S +F+
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQILRRGV-LSSRVAAQLVS---CSSLLKSPDYSLSIFR 84
Query: 91 --EVKNPSVTLWNQMIRG---HARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARS 145
E +NP V N +IRG +AR ES + IL M +P+ LT+ F+L ++
Sbjct: 85 NSEERNPFVL--NALIRGLTENARFESSVRHFIL---MLRLGVKPDRLTFPFVLKSNSKL 139
Query: 146 GLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE---------- 195
G G +H L N + F++ +L+++Y G +++A +VF+E
Sbjct: 140 GFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQ---LKHAFQVFEESPDRIKKESI 196
Query: 196 -------------------------MGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
M ERN W++++ Y+ G + A+++F+ M E+
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
NVV+WTT+I G+++ G A+ + +M + ++ ++ A LSAC++ G L G IH
Sbjct: 257 NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
YI + L ++ AL+ MYA CG ++ A VF M + +SWT MI +A
Sbjct: 317 GYILD----NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVH 372
Query: 351 GYANEALAIFELMQSLG 367
G ++A+ F M G
Sbjct: 373 GRFHQAIQCFRQMMYSG 389
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
+ L+ Y+ SG L A ++F+ + +V W +I G +++ ++ + +M +
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
PN T + +LS C++SG L G ++HG +L NG + + T L+++Y
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYA----------- 339
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
+CG ++ A +F M +++++WT MI G+A +G+
Sbjct: 340 -----------------------KCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFH 376
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
QA+ F +M + D+V +A L+AC ++ LG ++ + +L + L
Sbjct: 377 QAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG--LNFFDSMRLDYAIEPTLKHY- 433
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNI-SWTTMICAF-AKQGY 352
++ + G + EA+E+ MP ++ +W + A A +GY
Sbjct: 434 VLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGY 478
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 106/165 (64%), Gaps = 4/165 (2%)
Query: 201 IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRR 260
I NS+L +Y CG+V A ++FDKM E+++V W ++I G+A NGK +AL L+ +M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 261 AHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCG 320
+ D ++V+ LSACA++G L LG+ +H Y+ + G +++L S N L+ +YA CG
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK--VGLTRNLHSS--NVLLDLYARCG 138
Query: 321 VIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+EEA +F M ++++SWT++I A G+ EA+ +F+ M+S
Sbjct: 139 RVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 41/316 (12%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH+ ++ GF Y+ LL Y G + SA+KVF ++ + WN +I G A +
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
P +++ L+ +M + +P+ T LLS CA+ G L G++VH ++ G N+
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
L++LY G VE A+ +FDEM ++N
Sbjct: 130 LLDLYARCGR---VEEAKTLFDEMVDKN-------------------------------S 155
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD-QVSLVAALSACAELGDLRLGRWIHT 291
V+WT++I G A NG ++A+ LF M L +++ V L AC+ G ++ G
Sbjct: 156 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 215
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQ 350
+ E+ + + I ++ + A G +++AYE + MP + N+ W T++ A
Sbjct: 216 RMREEYKIEPR---IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Query: 351 GYANEALAIFELMQSL 366
G ++ LA F +Q L
Sbjct: 273 GDSD--LAEFARIQIL 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
+ D+RLG IH+ + G LI + N+L+H+YA+CG + AY+VF MP++ ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGS----LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 56
Query: 340 WTTMICAFAKQGYANEALAIFELMQSLG 367
W ++I FA+ G EALA++ M S G
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNSKG 84
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 160/331 (48%), Gaps = 41/331 (12%)
Query: 40 LLQSCK---TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L+SC L++ +H IV G Y L++ Y + S +VF+ +
Sbjct: 111 VLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKD 170
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V +N +I G+A+S ++ + +M + +P+ T S +L + + +G+++HG
Sbjct: 171 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 230
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
V+ G +V++ ++L+++Y +
Sbjct: 231 YVIRKGIDSDVYIGSSLVDMYA----------------------------------KSAR 256
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+E + R+F ++ R+ ++W +++AGY +NG+ +AL LF +M A V V+ + + A
Sbjct: 257 IEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA 316
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
CA L L LG+ +H Y+ G + I + +AL+ MY+ CG I+ A ++F M
Sbjct: 317 CAHLATLHLGKQLHGYVLRGGFGSN----IFIASALVDMYSKCGNIKAARKIFDRMNVLD 372
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLG 367
+SWT +I A G+ +EA+++FE M+ G
Sbjct: 373 EVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 403
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 139/296 (46%), Gaps = 38/296 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+IH ++ G YI + L+ Y S + + +VF + WN ++ G+ ++
Sbjct: 227 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 286
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+++ LF QM A+ +P + +S ++ CA L G+Q+HG VL G+ N+F+ +
Sbjct: 287 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 346
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
L+++Y G ++ A+++FD M + D+
Sbjct: 347 ALVDMYSKCG---NIKAARKIFDRMN-------------------------VLDE----- 373
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
V+WT +I G+A +G +A+ LF +M+R V +QV+ VA L+AC+ +G L W +
Sbjct: 374 -VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG-LVDEAWGYF 431
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICA 346
K+ G +Q L A+ + G +EEAY M S W+T++ +
Sbjct: 432 NSMTKVYGLNQEL--EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 485
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 8/220 (3%)
Query: 46 TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIR 105
TL Q+H ++ GF +I + L+ Y G++ +A K+F + W +I
Sbjct: 322 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 381
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG-EQVHGRVLVNGYY 164
GHA ++V LF +M+ +PN + + +L+ C+ GL+ E + V G
Sbjct: 382 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 441
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRI 223
+ + +L G AG +E A +M E W+++L+ N+E A ++
Sbjct: 442 QELEHYAAVADLLGRAGK---LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 498
Query: 224 FDKMM---ERNVVTWTTMIAGYARNGKCRQALILFNKMRR 260
+K+ N+ + M YA NG+ ++ L +MR+
Sbjct: 499 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 538
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 224 FDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDL 283
F + V+ W ++I + +AL F +MR + D + L +C + DL
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 284 RLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTM 343
R G +H +I + NAL++MYA ++ VF MP++ +S+ T+
Sbjct: 122 RFGESVHGFIVR----LGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTI 177
Query: 344 ICAFAKQGYANEALAIFELMQSLGANEAKP 373
I +A+ G +AL +++ +G + KP
Sbjct: 178 IAGYAQSGMYEDAL---RMVREMGTTDLKP 204
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 171/355 (48%), Gaps = 48/355 (13%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H +V G ++ + I AKL++FY+ G +L A KVF E+ ++ MI AR+
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE-GEQVHGRVLVNGYYPNVFMKT 171
++S+ F +M + + LL +R+ L RE G+ +H VL Y + F+ +
Sbjct: 98 YQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAFIVS 156
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM---- 227
+LI++Y G V A++VF ++GE+++V +N+M++ Y + A + M
Sbjct: 157 SLIDMYSKFGE---VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 228 -----------------------------------MERNVVTWTTMIAGYARNGKCRQAL 252
+ +VV+WT++I+G N + +A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 253 ILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
F +M + + +++ L AC L ++ G+ IH Y ++G + +AL
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGY--SVVTGLEDHGFV--RSAL 329
Query: 313 IHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ MY CG I EA +FR PK++ +++ +MI +A G A++A+ +F+ M++ G
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATG 384
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 159/355 (44%), Gaps = 49/355 (13%)
Query: 40 LLQSCKTL---KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LL++ + L ++ IH ++ + ++I++ L+ Y G + +A KVF ++
Sbjct: 123 LLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQD 182
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ ++N MI G+A + +++ L M+ +P+++T++ L+SG + + ++
Sbjct: 183 LVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILE 242
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG------------------- 197
+ ++GY P+V T++I+ G+ +F E A F +M
Sbjct: 243 LMCLDGYKPDVVSWTSIIS--GLV-HNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 198 --------------------ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTT 237
E + +++L +Y +CG + A +F K ++ VT+ +
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 238 MIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKL 297
MI YA +G +A+ LF++M LD ++ A L+AC+ G LG+ + ++ K
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 298 SGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI-SWTTMICAFAKQG 351
+ + ++ + G + EAYE+ + M ++ W ++ A G
Sbjct: 420 RIVPR---LEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 19/218 (8%)
Query: 10 FQSSYQMLLEELIP-ANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQK 65
F + QML L P + TI T LL +C TL Y+ +IH V+ G
Sbjct: 273 FDAFKQMLTHGLYPNSATIIT----------LLPACTTLAYMKHGKEIHGYSVVTGLEDH 322
Query: 66 SYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRA 125
++ + LL Y G + A +F++ + +N MI +A K+V LF+QM A
Sbjct: 323 GFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEA 382
Query: 126 AEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY--YPNVFMKTNLINLYGMAGAD 183
+ + LT++ +L+ C+ +GL G+ + ++ N Y P + +++L G AG
Sbjct: 383 TGEKLDHLTFTAILTACSHAGLTDLGQNLF-LLMQNKYRIVPRLEHYACMVDLLGRAGK- 440
Query: 184 FGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGAR 221
VE + + E ++ W ++LA GN+E AR
Sbjct: 441 -LVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELAR 477
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 147/306 (48%), Gaps = 43/306 (14%)
Query: 68 ILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
++ +L Y G + A ++F + ++ WN MI +AR+ + + F +M
Sbjct: 269 VMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN 328
Query: 128 A-EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
+P+++T LL A + EG +HG + G+ P++ ++T LI++YG
Sbjct: 329 GLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYG-------- 376
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNG 246
CG ++ A IFD+M E+NV++W ++IA Y +NG
Sbjct: 377 --------------------------ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNG 410
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
K AL LF ++ + + D ++ + L A AE L GR IH YI + + +L
Sbjct: 411 KNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL- 469
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSL 366
N+L+HMYA CG +E+A + F + + +SW ++I A+A G+ ++ +F M +
Sbjct: 470 ---NSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 367 GANEAK 372
N K
Sbjct: 527 RVNPNK 532
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 143/296 (48%), Gaps = 37/296 (12%)
Query: 69 LAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA 128
L + L + S + A ++F E+ LWN MI+G ++V +++M A
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
+ + TY F++ A L EG+++H V+ G+ +V+
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVY-------------------- 166
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
VC NS++++YM+ G A ++F++M ER++V+W +MI+GY G
Sbjct: 167 -------------VC-NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDG 212
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
+L+LF +M + D+ S ++AL AC+ + ++G+ IH + + + ++ + +
Sbjct: 213 FSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH---AVRSRIETGDVMV 269
Query: 309 NNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
+++ MY+ G + A +F M +R+ ++W MI +A+ G +A F+ M
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH + GF + L+ Y G L SA +F + +V WN +I + ++
Sbjct: 352 IHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK 411
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
++ LF ++ + P+ T + +L A S L EG ++H ++ + Y+ N + +
Sbjct: 412 NYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS 471
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
L+++Y M CG++E AR+ F+ ++ ++V
Sbjct: 472 LVHMYAM----------------------------------CGDLEDARKCFNHILLKDV 497
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
V+W ++I YA +G R ++ LF++M + V+ ++ + + L+AC+ G
Sbjct: 498 VSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISG 546
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 15/240 (6%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
+Q L + + ++ T + IL + L +L +IH IV + + IL L+
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESL-----SLSEGREIHAYIVKSRYWSNTIILNSLV 473
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y G L A K F + V WN +I +A R SV LF++M A+ PN
Sbjct: 474 HMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKS 533
Query: 134 TYSFLLSGCARSGLLREG-EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
T++ LL+ C+ SG++ EG E G P + +++L G G A+R
Sbjct: 534 TFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTG---NFSAAKRF 590
Query: 193 FDEMG-ERNIVCWNSMLAVYMRCGNVE----GARRIFDKMMERNVVTWTTMIAGYARNGK 247
+EM W S+L ++ A +IF KM N + ++ YA G+
Sbjct: 591 LEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIF-KMEHDNTGCYVLLLNMYAEAGR 649
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+E A ++FD+M + + W MI G+ G +A+ +++M A V D + + +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
A + L G+ IH + KL S + + N+LI +Y G +A +VF MP+R
Sbjct: 140 VAGISSLEEGKKIHAMVI-KLGFVSD---VYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLG 367
+SW +MI + G +L +F+ M G
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCG 226
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 164/343 (47%), Gaps = 43/343 (12%)
Query: 38 FHLLQSCKTLKYLSQIHTQIVIHG-----------------FSQKSYILAKLLSFYIASG 80
F L++ ++ +L Q+H +++ G F SY + S Y + G
Sbjct: 26 FKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTV----SIYRSIG 81
Query: 81 HLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLS 140
L A+ VFK + S SP++++ + + P+ T+ L+S
Sbjct: 82 KLYCANPVFK---------------AYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLIS 126
Query: 141 GCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERN 200
++ + G+ HG+ + +G + ++ +L+++Y GA ++ A+++F E+ +R+
Sbjct: 127 CIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGA---LDLAKKLFVEIPKRD 183
Query: 201 IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRR 260
IV WNS++A +R G+V A ++FD+M ++N+++W MI+ Y ++ LF +M R
Sbjct: 184 IVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVR 243
Query: 261 AHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCG 320
A ++ +LV L+AC L+ GR +H + S + ++ ALI MY C
Sbjct: 244 AGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSS----VVIDTALIDMYGKCK 299
Query: 321 VIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+ A +F + R+ ++W MI A G L +FE M
Sbjct: 300 EVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM 342
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 41/304 (13%)
Query: 33 LQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV 92
+Q L H+ C L ++ +I + I+A + + +G +L+AHK+F E+
Sbjct: 155 VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGM----VRNGDVLAAHKLFDEM 210
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
+ ++ WN MI + + +P S+ LF +M A + N T LL+ C RS L+EG
Sbjct: 211 PDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGR 270
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
VH ++ +V + T LI++YG
Sbjct: 271 SVHASLIRTFLNSSVVIDTALIDMYG---------------------------------- 296
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
+C V ARRIFD + RN VTW MI + +G+ L LF M + D+V+ V
Sbjct: 297 KCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVG 356
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
L CA G + G+ ++ + ++ K + ++Y+S G EEA E + +
Sbjct: 357 VLCGCARAGLVSQGQSYYSLMVDEFQIKPN---FGHQWCMANLYSSAGFPEEAEEALKNL 413
Query: 333 PKRS 336
P
Sbjct: 414 PDED 417
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 7/208 (3%)
Query: 34 QQHLFHLLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
+ L LL +C LK +H ++ + I L+ Y + A ++F
Sbjct: 250 ESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFD 309
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE 150
+ + WN MI H P + LF M P+ +T+ +L GCAR+GL+ +
Sbjct: 310 SLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQ 369
Query: 151 GEQVHGRVLVNGYY--PNVFMKTNLINLYGMAGADFGVEYA-QRVFDEMGERNIVCWNSM 207
G+ + ++V+ + PN + + NLY AG E A + + DE W ++
Sbjct: 370 GQSYYS-LMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANL 428
Query: 208 LAVYMRCGNVEGARRIFDKMMERNVVTW 235
L+ GN I ++E + + +
Sbjct: 429 LSSSRFTGNPTLGESIAKSLIETDPLNY 456
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 155/329 (47%), Gaps = 40/329 (12%)
Query: 41 LQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLW 100
++SC +++ +H ++V + +I +L+ Y+ GH + A K+F E+ + W
Sbjct: 41 VKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSW 100
Query: 101 NQMIRGHARSESPRKSVILFNQMRAAEA--EPNLLTYSFLLSGCARSGLLREGEQVHGRV 158
N +I G++ K + ++M +E PN +T+ ++S C G EG +HG V
Sbjct: 101 NSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLV 160
Query: 159 LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVE 218
+ G V + IN YG + G++
Sbjct: 161 MKFGVLEEVKVVNAFINWYG----------------------------------KTGDLT 186
Query: 219 GARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
+ ++F+ + +N+V+W TMI + +NG + L FN RR + DQ + +A L +C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 279 ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI 338
++G +RL + IH I G S + I+ AL+ +Y+ G +E++ VF + ++
Sbjct: 247 DMGVVRLAQGIHGLI--MFGGFSGNKCIT--TALLDLYSKLGRLEDSSTVFHEITSPDSM 302
Query: 339 SWTTMICAFAKQGYANEALAIFELMQSLG 367
+WT M+ A+A G+ +A+ FELM G
Sbjct: 303 AWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 138/322 (42%), Gaps = 42/322 (13%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH ++ G ++ ++ +++Y +G L S+ K+F+++ ++ WN MI H ++
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL 215
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
K + FN R EP+ T+ +L C G++R + +HG ++ G+ N + T
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
L++LY + G +E + +F ++ +
Sbjct: 276 LLDLYS----------------------------------KLGRLEDSSTVFHEITSPDS 301
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
+ WT M+A YA +G R A+ F M + D V+ L+AC+ G + G+ Y
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGK---HY 358
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMI--CAFAK 349
E + + ++ + G++++AY + + MP + S+ W ++ C K
Sbjct: 359 FETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYK 418
Query: 350 --QGYANEALAIFELMQSLGAN 369
Q A +FEL G N
Sbjct: 419 DTQLGTKAAERLFELEPRDGRN 440
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 36/326 (11%)
Query: 76 YIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR--AAEAEPNLL 133
Y G + A+++F E+ ++ W MI G A +E R++++LF +M+ PN
Sbjct: 241 YCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE 300
Query: 134 TYSFLLSGCARSGL--LREGEQVHGRVLVNGYYP---NVFMKTNLINLYGMAG------- 181
T L C G+ R GEQ+H +V+ NG+ + + +L+++Y +G
Sbjct: 301 TLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQS 360
Query: 182 -------------------ADFGVEYAQRVFDEMGE-RNIVCWNSMLAVYMRCGNVEGAR 221
+ +E A+ +F+ + + V W SM+ Y+ G+V A
Sbjct: 361 LLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAF 420
Query: 222 RIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
+F K+ +++ VTWT MI+G +N +A L + M R + + LS+
Sbjct: 421 GLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATS 480
Query: 282 DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWT 341
+L G+ IH I + + L+ L N+L+ MYA CG IE+AYE+F M ++ +SW
Sbjct: 481 NLDQGKHIHCVIAKTTACYDPDLI--LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWN 538
Query: 342 TMICAFAKQGYANEALAIFELMQSLG 367
+MI + G A++AL +F+ M G
Sbjct: 539 SMIMGLSHHGLADKALNLFKEMLDSG 564
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 53/327 (16%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
+L+ Y+ + A +F+E+ +V W M+ +V LF++M E N
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDEM----PERN 168
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP-NVFMKTNLINLYGMAGADFGVEYAQ 190
+++++ L++G R+G + + +QV + N +K + N G+E A+
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIEN--------DGMEEAK 220
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+F +M E+N+V W SM+ Y R G+V A R+F +M ERN+V+WT MI+G+A N R+
Sbjct: 221 LLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 251 ALILFNKMRRAHVDLDQVS-----LVAALSACAELG------------------------ 281
AL+LF +M++ D+D VS L++ AC LG
Sbjct: 281 ALMLFLEMKK---DVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDH 337
Query: 282 DLRLGR-WIHTYIEEKLSGKSQSLL-----ISLNNALIHMYASCGVIEEAYEVF-RWMPK 334
D RL + +H Y L +QSLL + N +I+ Y G +E A +F R
Sbjct: 338 DGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSL 397
Query: 335 RSNISWTTMICAFAKQGYANEALAIFE 361
+SWT+MI + + G + A +F+
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 131/269 (48%), Gaps = 17/269 (6%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTL-WNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
+++ Y+ +G L A +F+ VK+ + W MI G+ + ++ LF ++ +
Sbjct: 374 IINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG-- 431
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+T++ ++SG ++ L E + ++ G P + + L AGA ++ +
Sbjct: 432 --VTWTVMISGLVQNELFAEAASLLSDMVRCGLKP---LNSTYSVLLSSAGATSNLDQGK 486
Query: 191 RVFDEMG------ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYAR 244
+ + + +++ NS++++Y +CG +E A IF KM++++ V+W +MI G +
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSH 546
Query: 245 NGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSL 304
+G +AL LF +M + + V+ + LSAC+ G + G + ++E S +
Sbjct: 547 HGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG-- 604
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMP 333
I ++I + G ++EA E +P
Sbjct: 605 -IDHYISMIDLLGRAGKLKEAEEFISALP 632
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 61/237 (25%)
Query: 185 GVEYAQRVFDEMGERN----IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVT------ 234
G+ +A+ + D++ +R +V W S+L+ Y + G ++ AR +F+ M ERN+VT
Sbjct: 57 GLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLT 116
Query: 235 ------------------------WTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSL 270
WT M+ +G+ A+ LF++M +V VS
Sbjct: 117 GYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNV----VSW 172
Query: 271 VAALSACAELGDLRLGR-------------W---IHTYIEEKLSGKSQSLLISLN----- 309
++ GD+ + W I YIE +++ L ++
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Query: 310 --NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
++++ Y G + EAY +F MP+R+ +SWT MI FA EAL +F M+
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK 289
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 162/362 (44%), Gaps = 51/362 (14%)
Query: 11 QSSYQMLLEEL--IPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQK 65
+ S +M LE L + +T S +L+ +C L+ LS I+ ++ GF +
Sbjct: 290 EESVRMFLENLDQFKPDLLTVSSVLR--------ACGHLRDLSLAKYIYNYMLKAGFVLE 341
Query: 66 SYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRA 125
S + L+ Y G +++A VF ++ WN +I G+ +S +++ LF M
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 126 AEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG 185
E + + +TY L+S R L+ G+ +H + +G ++ + LI++Y
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYA------- 454
Query: 186 VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARN 245
+CG V + +IF M + VTW T+I+ R
Sbjct: 455 ---------------------------KCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
G L + +MR++ V D + + L CA L RLG+ IH + + +S+
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESE--- 543
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+ + NALI MY+ CG +E + VF M +R ++WT MI A+ G +AL F M+
Sbjct: 544 LQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK 603
Query: 366 LG 367
G
Sbjct: 604 SG 605
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%), Gaps = 49/301 (16%)
Query: 59 IHGFSQKSYILAK------LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+HGF+ KS + + L++ Y+ A +VF E+ +N MI G+ + E
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
+SV +F + + +P+LLT S +L C G LR+ + + Y N +K
Sbjct: 289 VEESVRMFLE-NLDQFKPDLLTVSSVLRAC---GHLRD-------LSLAKYIYNYMLK-- 335
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
A F +E R N ++ VY +CG++ AR +F+ M ++
Sbjct: 336 ---------AGFVLESTVR-------------NILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
V+W ++I+GY ++G +A+ LF M D ++ + +S L DL+ G+ +H+
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS- 432
Query: 293 IEEKLSGKSQSLLI--SLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
+G + I S++NALI MYA CG + ++ ++F M ++W T+I A +
Sbjct: 433 -----NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 351 G 351
G
Sbjct: 488 G 488
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 154/332 (46%), Gaps = 39/332 (11%)
Query: 30 SRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVF 89
+R+ + L S L L +IH ++ G + KL+ Y S+ VF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 90 KEVKNP-SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLL 148
+ V +V LWN +IR +++ +++ + ++R ++ P+ T+ ++ CA
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA----- 117
Query: 149 REGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
G+ A+ G +++ D E ++ N+++
Sbjct: 118 -----------------------------GLFDAEMGDLVYEQILDMGFESDLFVGNALV 148
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
+Y R G + AR++FD+M R++V+W ++I+GY+ +G +AL ++++++ + + D
Sbjct: 149 DMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSF 208
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
++ + L A L ++ G+ +H + + + ++ +NN L+ MY +A V
Sbjct: 209 TVSSVLPAFGNLLVVKQGQGLHGFALK----SGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
F M R ++S+ TMIC + K E++ +F
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 125/306 (40%), Gaps = 38/306 (12%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRG 106
LK+ +H+ + G + L+ Y G + + K+F + WN +I
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Query: 107 HARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPN 166
R + + QMR +E P++ T+ L CA R G+++H +L GY
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY--- 540
Query: 167 VFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
E + N+++ +Y +CG +E + R+F++
Sbjct: 541 -------------------------------ESELQIGNALIEMYSKCGCLENSSRVFER 569
Query: 227 MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
M R+VVTWT MI Y G+ +AL F M ++ + D V +A + AC+ G + G
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMIC 345
E+ + +I ++ + + I +A E + MP + + S W +++
Sbjct: 630 L---ACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLR 686
Query: 346 AFAKQG 351
A G
Sbjct: 687 ACRTSG 692
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 163/363 (44%), Gaps = 49/363 (13%)
Query: 17 LLEELIPANTITTSRIL--------QQHLFHLL-QSCKTLKYLSQIHTQIVIHGFSQKSY 67
+L L+ N + T R L +H+ +L +L+ L + + I+ G S+ +
Sbjct: 1 MLRRLLKPNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIF 60
Query: 68 ILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
+ +KL+S Y + G + +VF V + LWN +I+ H + +S+ F M +
Sbjct: 61 VASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSG 120
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVE 187
P+ T ++S CA G VHG VL +G +
Sbjct: 121 QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGF----------------------- 157
Query: 188 YAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
+RN S + Y +CG ++ A +FD+M +R+VV WT +I+G+ +NG+
Sbjct: 158 ----------DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Query: 248 CRQALILFNKMRRAHVDLDQV---SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSL 304
L KM A D+D+ +L AC+ LG L+ GR +H + + +G + S
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVK--NGLASSK 265
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
+ +++ Y+ G EAY FR + SWT++I + A+ G E+ +F MQ
Sbjct: 266 FV--QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ 323
Query: 365 SLG 367
+ G
Sbjct: 324 NKG 326
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 161/357 (45%), Gaps = 31/357 (8%)
Query: 41 LQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
Q+C L L + +H V +G + ++ + + SFY SG+ A+ F+E+ + +
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
W +I ARS +S +F +M+ P+ + S L++ + L+ +G+ HG
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGT 356
Query: 158 VLVNGYYPNVFMKTNLIN---------------------LYGMAGADFGVEYAQRVFDEM 196
V + +++ K L++ L G G V
Sbjct: 357 VCNS--LLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGAVLLGKSLHCYVVKTS 414
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
+ I NS++ +Y + G++ A R+F + + NV+TW MIA Y + +A+ LF+
Sbjct: 415 LDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFD 473
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMY 316
+M + ++LV L AC G L G+ IH YI E + +SL+ ALI MY
Sbjct: 474 RMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET----EHEMNLSLSAALIDMY 529
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
A CG +E++ E+F ++ + W MI + G A+A+F+ M+ P
Sbjct: 530 AKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGP 586
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 48/305 (15%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+H +V ++ L+ Y G L A ++F E +T WN MI + E
Sbjct: 405 SLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVIT-WNAMIASYVHCE 463
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
K++ LF++M + +P+ +T LL C +G L G+ +H + + N+ +
Sbjct: 464 QSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSA 523
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
LI++Y +CG++E +R +FD +++
Sbjct: 524 ALIDMYA----------------------------------KCGHLEKSRELFDAGNQKD 549
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI-- 289
V W MI+GY +G A+ LF++M + V + +A LSAC G + G+ +
Sbjct: 550 AVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFL 609
Query: 290 --HTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMICA 346
H Y + K + K S L+ L + G +EEA MP + W T++ +
Sbjct: 610 KMHQY-DVKPNLKHYSCLVDL-------LSRSGNLEEAESTVMSMPFSPDGVIWGTLLSS 661
Query: 347 FAKQG 351
G
Sbjct: 662 CMTHG 666
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 151/340 (44%), Gaps = 36/340 (10%)
Query: 53 IHTQIVIHG-FSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+H ++ HG F + + + A + FY G L A VF E+ + V W +I GH ++
Sbjct: 147 VHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNG 206
Query: 112 SPRKSVILFNQMRAAEAE---PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF 168
+ +M +A ++ PN T C+ G L+EG +HG + NG + F
Sbjct: 207 ESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKF 266
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIF---- 224
+++++ + Y +G A F E+G+ ++ W S++A R G++E + +F
Sbjct: 267 VQSSMFSFYSKSG---NPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ 323
Query: 225 DKMMERNVVTWTTMIAGYAR-----NGKCRQALILFNKMRRAHVDLDQVSLVAAL----- 274
+K M + V + +I + GK + N + + + +S+ L
Sbjct: 324 NKGMHPDGVVISCLINELGKMMLVPQGKAFHGTVC-NSLLSMYCKFELLSVAEKLFCRIS 382
Query: 275 ---------SACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
+ G + LG+ +H Y+ + S L IS+ N+LI +Y G + A
Sbjct: 383 EEGNKEAWNTMLKGYGAVLLGKSLHCYVVK----TSLDLTISVVNSLIDLYGKMGDLTVA 438
Query: 326 YEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+ +F + I+W MI ++ + +A+A+F+ M S
Sbjct: 439 WRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVS 477
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 3/175 (1%)
Query: 199 RNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM 258
NI + +++ Y G + R+F + R++ W ++I + NG ++L F M
Sbjct: 57 ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM 116
Query: 259 RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYAS 318
+ D + +SACAEL +G ++H + K G ++ ++ + ++ Y+
Sbjct: 117 LLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV-LKHGGFDRN--TAVGASFVYFYSK 173
Query: 319 CGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
CG +++A VF MP R ++WT +I + G + L M S G++ KP
Sbjct: 174 CGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKP 228
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 18/238 (7%)
Query: 37 LFHLLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L LL +C +L+ IH I + A L+ Y GHL + ++F
Sbjct: 487 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN 546
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
WN MI G+ ++ LF+QM ++ +P T+ LLS C +GL+ +G++
Sbjct: 547 QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKK 606
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYM 212
+ ++ PN+ + L++L +G +E A+ M + V W ++L+ M
Sbjct: 607 LFLKMHQYDVKPNLKHYSCLVDLLSRSG---NLEEAESTVMSMPFSPDGVIWGTLLSSCM 663
Query: 213 RCGNVEGARRIFDKMMERNVVT------WTTMIAG-YARNGKCRQALILFNKMRRAHV 263
G E R M ER V + + M+A Y+ GK +A MR + V
Sbjct: 664 THGEFEMGIR----MAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 717
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 9/316 (2%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H + G S ++ KL++FY A L A + + + WN +I + R++
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNK 163
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++SV ++ +M + + TY ++ CA G VHG + V+ + N+++
Sbjct: 164 RFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM---- 227
LI++Y G V+ A+R+FD M ER+ V WN+++ Y + A ++ D+M
Sbjct: 224 ALISMYKRFGK---VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
+E ++VTW T+ G G AL MR +V + V+++ L AC+ +G L+ G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
H + S + ++ N+LI MY+ C + A+ VF+ + S +W ++I F
Sbjct: 341 VFHCLVIRSCSFSHD--IDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 348 AKQGYANEALAIFELM 363
A + E + + M
Sbjct: 399 AYNERSEETSFLLKEM 414
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 36/262 (13%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L++ Y L A VF++V+ S++ WN +I G A +E ++ L +M + PN
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+T + +L AR G L+ G++ H +L Y +
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC------------------------ 458
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
++ WNS++ +Y + G + A+R+FD M +R+ VT+T++I GY R GK A
Sbjct: 459 ---------LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
L F M R+ + D V++VA LSAC+ +R G W+ T +E + L + +
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR---LRLEHYSC 566
Query: 312 LIHMYASCGVIEEAYEVFRWMP 333
++ +Y G +++A ++F +P
Sbjct: 567 MVDLYCRAGYLDKARDIFHTIP 588
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 40/246 (16%)
Query: 120 FNQMRAAEAEPNLLTYSF--LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLY 177
F+ +R + YS LLS C G+Q+H + +G + + L+ Y
Sbjct: 69 FSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFY 128
Query: 178 GMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTT 237
F+ + E + NS + + + W
Sbjct: 129 S-------------AFNLLDEAQTITENSEIL---------------------HPLPWNV 154
Query: 238 MIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKL 297
+I Y RN + ++++ ++ +M + D+ + + + ACA L D GR +H IE +
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE--V 212
Query: 298 SGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEAL 357
S +L + NALI MY G ++ A +F M +R +SW +I + + EA
Sbjct: 213 SSHRCNLYVC--NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 358 AIFELM 363
+ + M
Sbjct: 271 KLLDRM 276
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 9/316 (2%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H + G S ++ KL++FY A L A + + + WN +I + R++
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNK 163
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++SV ++ +M + + TY ++ CA G VHG + V+ + N+++
Sbjct: 164 RFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM---- 227
LI++Y G V+ A+R+FD M ER+ V WN+++ Y + A ++ D+M
Sbjct: 224 ALISMYKRFGK---VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
+E ++VTW T+ G G AL MR +V + V+++ L AC+ +G L+ G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
H + S + ++ N+LI MY+ C + A+ VF+ + S +W ++I F
Sbjct: 341 VFHCLVIRSCSFSHD--IDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 348 AKQGYANEALAIFELM 363
A + E + + M
Sbjct: 399 AYNERSEETSFLLKEM 414
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 36/262 (13%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L++ Y L A VF++V+ S++ WN +I G A +E ++ L +M + PN
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+T + +L AR G L+ G++ H +L Y +
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC------------------------ 458
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
++ WNS++ +Y + G + A+R+FD M +R+ VT+T++I GY R GK A
Sbjct: 459 ---------LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
L F M R+ + D V++VA LSAC+ +R G W+ T +E + L + +
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR---LRLEHYSC 566
Query: 312 LIHMYASCGVIEEAYEVFRWMP 333
++ +Y G +++A ++F +P
Sbjct: 567 MVDLYCRAGYLDKARDIFHTIP 588
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 40/246 (16%)
Query: 120 FNQMRAAEAEPNLLTYSF--LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLY 177
F+ +R + YS LLS C G+Q+H + +G + + L+ Y
Sbjct: 69 FSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFY 128
Query: 178 GMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTT 237
F+ + E + NS + + + W
Sbjct: 129 S-------------AFNLLDEAQTITENSEIL---------------------HPLPWNV 154
Query: 238 MIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKL 297
+I Y RN + ++++ ++ +M + D+ + + + ACA L D GR +H IE +
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE--V 212
Query: 298 SGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEAL 357
S +L + NALI MY G ++ A +F M +R +SW +I + + EA
Sbjct: 213 SSHRCNLYVC--NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 358 AIFELM 363
+ + M
Sbjct: 271 KLLDRM 276
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 150/315 (47%), Gaps = 46/315 (14%)
Query: 54 HTQIVIHGFSQKSYILAK-LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
H +++ Q+S +L+ L+ Y+ +A VF +++ + W MI G +++
Sbjct: 172 HALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQN 231
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCAR----SGLLREGEQVHGRVLVNGYYPNVF 168
V LF M+ PN +T +L C S L++E +HG +G + +
Sbjct: 232 YEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKE---IHGFSFRHGCHAD-- 286
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
ER + +M Y RCGNV +R +F+
Sbjct: 287 -----------------------------ERLTAAFMTM---YCRCGNVSLSRVLFETSK 314
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
R+VV W++MI+GYA G C + + L N+MR+ ++ + V+L+A +SAC L
Sbjct: 315 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFA 348
+H+ I + G +L L NALI MYA CG + A EVF + ++ +SW++MI A+
Sbjct: 375 VHSQILK--CGFMSHIL--LGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYG 430
Query: 349 KQGYANEALAIFELM 363
G+ +EAL IF+ M
Sbjct: 431 LHGHGSEALEIFKGM 445
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 154/344 (44%), Gaps = 49/344 (14%)
Query: 37 LFHLLQSCKTLKY----LSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV 92
L +L +C L Y + +IH HG + A ++ Y G++ + +F+
Sbjct: 254 LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETS 313
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
K V +W+ MI G+A + + + L NQMR E N +T ++S C S LL
Sbjct: 314 KVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAS 373
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
VH ++L G+ ++ + LI++Y G+ + A+ VF E+ E+++V W+S
Sbjct: 374 TVHSQILKCGFMSHILLGNALIDMYAKCGS---LSAAREVFYELTEKDLVSWSS------ 424
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
MI Y +G +AL +F M + ++D ++ +A
Sbjct: 425 -------------------------MINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLA 459
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN--ALIHMYASCGVIEEAYEVFR 330
LSAC G + + I T +GK + ++L + I++ G I++A+EV
Sbjct: 460 ILSACNHAGLVEEAQTIFTQ-----AGKYH-MPVTLEHYACYINLLGRFGKIDDAFEVTI 513
Query: 331 WMP-KRSNISWTTMICAFAKQGYANEALAIF--ELMQSLGANEA 371
MP K S W++++ A G + A I ELM+S N A
Sbjct: 514 NMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPA 557
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 136/287 (47%), Gaps = 33/287 (11%)
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
V N ++++ + R +A RK +F++M + ++Y +++ C + GLL E
Sbjct: 84 VSNSLISMYAKFSRKYA----VRK---VFDEM----LHRDTVSYCSIINSCCQDGLLYEA 132
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVE---YAQRVFDEMGERNIVCWNSML 208
++ + G+ P + +L+ L G+ V +A + DE + +++ +++
Sbjct: 133 MKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALV 192
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
+Y++ + A +FD+M +N V+WT MI+G N + LF M+R ++ ++V
Sbjct: 193 DMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRV 252
Query: 269 SLVAALSACAELG-DLRLGRWIHTY-------IEEKLSGKSQSLLISLNNALIHMYASCG 320
+L++ L AC EL L + IH + +E+L+ A + MY CG
Sbjct: 253 TLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTA-----------AFMTMYCRCG 301
Query: 321 VIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ + +F R + W++MI +A+ G +E + + M+ G
Sbjct: 302 NVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEG 348
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 48/322 (14%)
Query: 41 LQSCK-TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
L++C+ LK QIH GF+ + ++ Y +G +A +F+ + +P V
Sbjct: 85 LKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
WN ++ G ++ V+ +M++A + TYS LS C S G Q+ V+
Sbjct: 145 WNTILSGFDDNQIALNFVV---RMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
KT L E ++V NS + +Y R G+ G
Sbjct: 202 ----------KTGL------------------------ESDLVVGNSFITMYSRSGSFRG 227
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCR-QALILFNKMRRAHVDLDQVSLVAALSACA 278
ARR+FD+M +++++W ++++G ++ G +A+++F M R V+LD VS + ++ C
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC 287
Query: 279 ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI 338
DL+L R IH + + L+ + N L+ Y+ CGV+E VF M +R+ +
Sbjct: 288 HETDLKLARQIHGLCIK----RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVV 343
Query: 339 SWTTMICAFAKQGYANEALAIF 360
SWTTMI + ++A++IF
Sbjct: 344 SWTTMISS-----NKDDAVSIF 360
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 139/316 (43%), Gaps = 56/316 (17%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+ + +V G + ++ Y SG A +VF E+ + WN ++ G ++
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 112 S-PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
+ ++V++F M E + ++++ +++ C L+ Q+HG + GY
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY------- 307
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
E + N +++ Y +CG +E + +F +M ER
Sbjct: 308 ---------------------------ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
NVV+WTTMI+ + A+ +F MR V ++V+ V ++A ++ G IH
Sbjct: 341 NVVSWTTMISSNKDD-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIH 395
Query: 291 T------YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMI 344
++ E S+ N+ I +YA +E+A + F + R ISW MI
Sbjct: 396 GLCIKTGFVSEP----------SVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 345 CAFAKQGYANEALAIF 360
FA+ G+++EAL +F
Sbjct: 446 SGFAQNGFSHEALKMF 461
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 46/319 (14%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRG 106
LK QIH + G+ + L+S Y G L + VF ++ +V W MI
Sbjct: 292 LKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-- 349
Query: 107 HARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPN 166
S + +V +F MR PN +T+ L++ + ++EG ++HG + G+
Sbjct: 350 ---SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSE 406
Query: 167 VFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
+ + I LY A +E A++ F+++ R I+ WN+
Sbjct: 407 PSVGNSFITLYAKFEA---LEDAKKAFEDITFREIISWNA-------------------- 443
Query: 227 MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRL- 285
MI+G+A+NG +AL +F A ++ + + L+A A D+ +
Sbjct: 444 -----------MISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVK 491
Query: 286 -GRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMI 344
G+ H ++ KL S ++ S AL+ MYA G I+E+ +VF M +++ WT++I
Sbjct: 492 QGQRCHAHL-LKLGLNSCPVVSS---ALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSII 547
Query: 345 CAFAKQGYANEALAIFELM 363
A++ G + +F M
Sbjct: 548 SAYSSHGDFETVMNLFHKM 566
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 10/213 (4%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+IH + GF + + ++ Y L A K F+++ + WN MI G A++
Sbjct: 393 KIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNG 452
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGC--ARSGLLREGEQVHGRVLVNGYYPNVFM 169
+++ +F AAE PN T+ +L+ A +++G++ H +L G +
Sbjct: 453 FSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVV 511
Query: 170 KTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
+ L+++Y G ++ +++VF+EM ++N W S+++ Y G+ E +F KM++
Sbjct: 512 SSALLDMYAKRG---NIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Query: 230 RNV----VTWTTMIAGYARNGKCRQALILFNKM 258
NV VT+ +++ R G + +FN M
Sbjct: 569 ENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 131/315 (41%), Gaps = 56/315 (17%)
Query: 59 IHGFSQKSYILAKLLSFYIASGHLLSAHKVFK-EVKNPSVTLWNQMIRGHARSESPRKSV 117
+H KS++ + S Y AHK+F + + T N I R SP +++
Sbjct: 7 LHCNRSKSFLFQRFYSPYRI------AHKLFDGSSQRNATTSINHSISESLRRNSPARAL 60
Query: 118 ILFN---QMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLI 174
+F Q+ + +T L C G L+ G Q+HG +G+
Sbjct: 61 SIFKENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGF----------- 107
Query: 175 NLYGMAGADFGVEYAQRVFDEMGERNIVC-WNSMLAVYMRCGNVEGARRIFDKMMERNVV 233
+ VC N+++ +Y + G + A IF+ +++ +VV
Sbjct: 108 ------------------------TSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 234 TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYI 293
+W T+++G+ N + AL +M+ A V D + ALS C LG + + +
Sbjct: 144 SWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 294 EEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG-Y 352
+ +G L++ N+ I MY+ G A VF M + ISW +++ +++G +
Sbjct: 201 VK--TGLESDLVV--GNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF 256
Query: 353 ANEALAIFELMQSLG 367
EA+ IF M G
Sbjct: 257 GFEAVVIFRDMMREG 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 101/223 (45%), Gaps = 8/223 (3%)
Query: 46 TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIR 105
++K + H ++ G + + + LL Y G++ + KVF E+ + +W +I
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL-VNGYY 164
++ + LF++M P+L+T+ +L+ C R G++ +G ++ ++ V
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEM-GERNIVCWNSMLAVYMRCGNVEGARRI 223
P+ + ++++ G AG ++ A+ + E+ G SML GNV+ ++
Sbjct: 609 PSHEHYSCMVDMLGRAGR---LKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKV 665
Query: 224 FDKMMERNVV---TWTTMIAGYARNGKCRQALILFNKMRRAHV 263
+ ME ++ M YA + +A + MR+ +V
Sbjct: 666 AELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNV 708
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 42/319 (13%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH +V G Y+ LLS Y G + A VF V + + +WN M+ +A ++
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND 352
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++ LF MR P+ T S ++S C+ GL G+ VH + + T
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL-----FKRPIQST 407
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+ I +++L +Y +CG A +F M E++
Sbjct: 408 STIE-----------------------------SALLTLYSKCGCDPDAYLVFKSMEEKD 438
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL--DQVSLVAALSACAELGDLRLGRWI 289
+V W ++I+G +NGK ++AL +F M+ L D + + +ACA L LR G +
Sbjct: 439 MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQV 498
Query: 290 H-TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFA 348
H + I+ L L + + ++LI +Y+ CG+ E A +VF M + ++W +MI ++
Sbjct: 499 HGSMIKTGL-----VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYS 553
Query: 349 KQGYANEALAIFELMQSLG 367
+ ++ +F LM S G
Sbjct: 554 RNNLPELSIDLFNLMLSQG 572
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 51/338 (15%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKE----- 91
LL++C L LS IH +V+ G+ +I L++ Y+ G L A +VF
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQ 125
Query: 92 --VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLR 149
V VT+WN MI G+ + ++ V F +M P+ + S ++S + G R
Sbjct: 126 SGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFR 185
Query: 150 --EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY-AQRVFDEMGERNIVCWNS 206
EG+Q+HG +L N + F+KT LI++Y FG+ A RVF E+ +++
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMY----FKFGLSIDAWRVFVEIEDKS------ 235
Query: 207 MLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
NVV W MI G+ +G C +L L+ + V L
Sbjct: 236 ------------------------NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLV 271
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
S AL AC++ + GR IH + K+ + + + +L+ MY+ CG++ EA
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDV-VKMGLHNDPYVCT---SLLSMYSKCGMVGEAE 327
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
VF + + W M+ A+A+ Y AL +F M+
Sbjct: 328 TVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 149/336 (44%), Gaps = 43/336 (12%)
Query: 37 LFHLLQSCKTL---KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +++ C L Y +H ++ S I + LL+ Y G A+ VFK ++
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA--EPNLLTYSFLLSGCARSGLLREG 151
+ W +I G ++ ++++ +F M+ + +P+ + + + CA LR G
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
QVHG ++ G NVF+ ++LI+LY G E A +VF M N+V WNSM
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP---EMALKVFTSMSTENMVAWNSM---- 548
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
I+ Y+RN ++ LFN M + D VS+
Sbjct: 549 ---------------------------ISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
+ L A + L G+ +H Y +L S + L NALI MY CG + A +F+
Sbjct: 582 SVLVAISSTASLLKGKSLHGYT-LRLGIPSDT---HLKNALIDMYVKCGFSKYAENIFKK 637
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
M +S I+W MI + G AL++F+ M+ G
Sbjct: 638 MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAG 673
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 149/329 (45%), Gaps = 44/329 (13%)
Query: 19 EELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIA 78
+ L P + I TS + + + L++ Q+H ++ G ++ + L+ Y
Sbjct: 470 DSLKPDSDIMTS------VTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523
Query: 79 SGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFL 138
G A KVF + ++ WN MI ++R+ P S+ LFN M + P+ ++ + +
Sbjct: 524 CGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583
Query: 139 LSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGE 198
L + + L +G+ +HG L G + +K LI++Y G +YA+ +F +M
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS---KYAENIFKKMQH 640
Query: 199 RNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM 258
++++ WN M I GY +G C AL LF++M
Sbjct: 641 KSLITWNLM-------------------------------IYGYGSHGDCITALSLFDEM 669
Query: 259 RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYAS 318
++A D V+ ++ +SAC G + G+ I ++++ G ++ N ++ +
Sbjct: 670 KKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDY-GIEPNMEHYAN--MVDLLGR 726
Query: 319 CGVIEEAYEVFRWMPKRSNIS-WTTMICA 346
G++EEAY + MP ++ S W ++ A
Sbjct: 727 AGLLEEAYSFIKAMPIEADSSIWLCLLSA 755
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
++ T+ LL C+ L G+ +HG V+V G+ + F+ T+L+N+Y G ++YA
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGF---LDYAV 115
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+VFD G + + R+V W +MI GY + + ++
Sbjct: 116 QVFD------------------------GWSQSQSGVSARDVTVWNSMIDGYFKFRRFKE 151
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRL--GRWIHTYIEEKLSGKSQSLLISL 308
+ F +M V D SL +S + G+ R G+ IH ++ S + S L
Sbjct: 152 GVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLDTDSF---L 207
Query: 309 NNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQGYANEALAIFELMQS 365
ALI MY G+ +A+ VF + +SN+ W MI F G +L ++ L ++
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
+ ++L + I ++++ + +L + S +L +H + G +++ L+
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVA-----ISSTASLLKGKSLHGYTLRLGIPSDTHLKNALI 619
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y+ G A +FK++++ S+ WN MI G+ ++ LF++M+ A P+ +
Sbjct: 620 DMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDV 679
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAG 181
T+ L+S C SG + EG+ + + + G PN+ N+++L G AG
Sbjct: 680 TFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAG 728
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 45/336 (13%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L L S L Y + +H QI++ G +Y+ L++ Y +G ++ A KVF+++ +
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLREGE--- 152
+ W+ M+ +S+++F + R + PN S + C SGL G
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMV 167
Query: 153 -QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
Q+ ++ +G+ +V++ T LI+ Y
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFY---------------------------------- 193
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
++ GN++ AR +FD + E++ VTWTTMI+G + G+ +L LF ++ +V D L
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
LSAC+ L L G+ IH +I + SL N LI Y CG + A+++F
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILR----YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
MP ++ ISWTT++ + + EA+ +F M G
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 152/337 (45%), Gaps = 48/337 (14%)
Query: 37 LFHLLQSCKTLK-----YLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKE 91
L +Q+C L + Q+ + +V GF + Y+ L+ FY+ G++ A VF
Sbjct: 149 LSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDA 208
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
+ S W MI G + S+ LF Q+ P+ S +LS C+ L G
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG 268
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+Q+H +L G + M +L+N+ ++ Y
Sbjct: 269 KQIHAHILRYG----LEMDASLMNV------------------------------LIDSY 294
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
++CG V A ++F+ M +N+++WTT+++GY +N ++A+ LF M + + D +
Sbjct: 295 VKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACS 354
Query: 272 AALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
+ L++CA L L G +H Y I+ L S + N+LI MYA C + +A +VF
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIKANLGNDSY-----VTNSLIDMYAKCDCLTDARKVFD 409
Query: 331 WMPKRSNISWTTMICAFAKQGYA---NEALAIFELMQ 364
+ + MI +++ G +EAL IF M+
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 163/360 (45%), Gaps = 47/360 (13%)
Query: 8 VHFQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQ 64
V Q YQ++ + ++P I ++ +L +C L +L QIH I+ +G
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILST---------VLSACSILPFLEGGKQIHAHILRYGLEM 282
Query: 65 KSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR 124
+ ++ L+ Y+ G +++AHK+F + N ++ W ++ G+ ++ ++++ LF M
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 125 AAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADF 184
+P++ S +L+ CA L G QVH + + ++ +LI++Y
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC-- 400
Query: 185 GVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYAR 244
+ A++VFD ++V +N+M+ Y R G W
Sbjct: 401 -LTDARKVFDIFAAADVVLFNAMIEGYSRLG-----------------TQW--------- 433
Query: 245 NGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSL 304
+ +AL +F MR + ++ V+ L A A L L L + IH + + +L
Sbjct: 434 --ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK----YGLNL 487
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
I +ALI +Y++C ++++ VF M + + W +M + +Q EAL +F +Q
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 151/332 (45%), Gaps = 17/332 (5%)
Query: 43 SCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQ 102
S +L QIH + +G + + + L+ Y L + VF E+K + +WN
Sbjct: 466 SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525
Query: 103 MIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNG 162
M G+ + +++ LF +++ + P+ T++ +++ ++ G++ H ++L G
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 163 YYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARR 222
N ++ L+++Y G+ E A + FD R++VCWNS+++ Y G + A +
Sbjct: 586 LECNPYITNALLDMYAKCGSP---EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQ 642
Query: 223 IFDKMM----ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
+ +KMM E N +T+ +++ + G L F M R ++ + V +S
Sbjct: 643 MLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLG 702
Query: 279 ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVI---EEAYEVFRWMPKR 335
G L R + EK+ K +++ +L+ A G + E A E+ +
Sbjct: 703 RAGRLNKAR----ELIEKMPTKPAAIVW---RSLLSGCAKAGNVELAEHAAEMAILSDPK 755
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ S+T + +A +G EA + E M+ G
Sbjct: 756 DSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 177/420 (42%), Gaps = 80/420 (19%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
Y +++ +P N T ++L F L+ KT IH+ I++ G + L+
Sbjct: 213 YSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKT------IHSNIIVRGIPLNVVLKTSLV 266
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
FY + A +V V LW ++ G R+ +++V F +MR+ +PN
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF 326
Query: 134 TYSFLLSGCARSGLLREGEQVH--------------GRVLVNGYY--------------- 164
TYS +LS C+ L G+Q+H G LV+ Y
Sbjct: 327 TYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGA 386
Query: 165 ---PNVF-----------------------------MKTNLINLYGMAGADFGVEYAQRV 192
PNV ++ N++ L G+ A + + +RV
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 193 FDEMG-------ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARN 245
+ + +V NS++ Y V+ A + M R+ +T+T+++ +
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNEL 506
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSL 304
GK AL + N M + +DQ+SL +SA A LG L G+ +H Y ++ SG + L
Sbjct: 507 GKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVL 566
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
N+L+ MY+ CG +E+A +VF + +SW ++ A G+ + AL+ FE M+
Sbjct: 567 -----NSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMR 621
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 151/344 (43%), Gaps = 58/344 (16%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+++SC L+ +S ++H ++ GF S + + L Y G A ++F ++N
Sbjct: 130 VVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNAD 189
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
W MI + R+++ +++M A PN T+ LL + GL G+ +H
Sbjct: 190 TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHS 248
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
++V G NV +KT+L++ Y F +M
Sbjct: 249 NIIVRGIPLNVVLKTSLVDFYSQ-------------FSKM-------------------- 275
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
E A R+ + E++V WT++++G+ RN + ++A+ F +MR + + + A LS
Sbjct: 276 -EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSL 334
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLI------SLNNALIHMYASCGVIE-EAYEVF 329
C+ + L G+ IH SQ++ + + NAL+ MY C E EA VF
Sbjct: 335 CSAVRSLDFGKQIH----------SQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 330 RWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
M + +SWTT+I G+ + F L+ + E +P
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDC---FGLLMEMVKREVEP 425
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 151/337 (44%), Gaps = 41/337 (12%)
Query: 33 LQQHLFHLLQSCKT--LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
LQ+ +L C++ + IH ++ G + + LLS Y+ + + +A K+F
Sbjct: 23 LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFD 82
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE 150
E+ + +V W MI +S+ ++ LF +M A+ PN T+S ++ CA +
Sbjct: 83 EMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISY 142
Query: 151 GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAV 210
G +VHG V+ G+ E N V +S+ +
Sbjct: 143 GGRVHGSVIKTGF----------------------------------EGNSVVGSSLSDL 168
Query: 211 YMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSL 270
Y +CG + A +F + + ++WT MI+ K R+AL +++M +A V ++ +
Sbjct: 169 YSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
V L A + LG L G+ IH+ I + L + L +L+ Y+ +E+A V
Sbjct: 229 VKLLGASSFLG-LEFGKTIHSNIIV----RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Query: 331 WMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++ WT+++ F + A EA+ F M+SLG
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 143/334 (42%), Gaps = 75/334 (22%)
Query: 22 IPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYI-ASG 80
+ N T S IL L + ++L + QIH+Q + GF + + L+ Y+ S
Sbjct: 321 LQPNNFTYSAILS-----LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 81 HLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLS 140
+ A +VF + +P+V W +I G + L +M E EPN++T S +L
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLR 435
Query: 141 GCAR-----------SGLLR---EGEQVHGRVLVNGY----------------------- 163
C++ + LLR +GE V G LV+ Y
Sbjct: 436 ACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNIT 495
Query: 164 YPNVFMKTNLINLYGMAGADFGVEYAQRV-FDEMG----------------ERNIVCW-- 204
Y ++ + N + + MA + Y + D++ +++ C+
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 205 -----------NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
NS++ +Y +CG++E A+++F+++ +VV+W +++G A NG AL
Sbjct: 556 KSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALS 615
Query: 254 LFNKMRRAHVDLDQVSLVAALSACA--ELGDLRL 285
F +MR + D V+ + LSAC+ L DL L
Sbjct: 616 AFEEMRMKETEPDSVTFLILLSACSNGRLTDLGL 649
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+H V GFS + +L L+ Y G L A KVF+E+ P V WN ++ G A +
Sbjct: 549 HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNG 608
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY--YPNVFM 169
++ F +MR E EP+ +T+ LLS C+ L G + + +V+ Y P V
Sbjct: 609 FISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE-YFQVMKKIYNIEPQVEH 667
Query: 170 KTNLINLYGMAG 181
+L+ + G AG
Sbjct: 668 YVHLVGILGRAG 679
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 18/320 (5%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH ++ +G + L+ FY G+L + F +++ ++ WN ++ G+A +
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD 396
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
P + LF QM P T+S L C + E +Q+H ++ GY N ++ +
Sbjct: 397 GP-ICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLS 451
Query: 172 NLINLYG----MAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
+L+ Y M A +++A G ++V N + +Y R G + ++ +
Sbjct: 452 SLMRSYAKNQLMNDALLLLDWAS------GPTSVVPLNIVAGIYSRRGQYHESVKLISTL 505
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
+ + V+W IA +R+ + + LF M ++++ D+ + V+ LS C++L DL LG
Sbjct: 506 EQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGS 565
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
IH I + + + + N LI MY CG I +VF +++ I+WT +I
Sbjct: 566 SIHGLITKTDFSCADTFVC---NVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCL 622
Query: 348 AKQGYANEALAIFELMQSLG 367
GY EAL F+ SLG
Sbjct: 623 GIHGYGQEALEKFKETLSLG 642
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 41/305 (13%)
Query: 64 QKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM 123
Q Y+ ++S Y G + A KVF ++ + +N +I+G+++ K+ +F++M
Sbjct: 47 QPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM 106
Query: 124 RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY-PNVFMKTNLINLYGMAGA 182
R PN T S LLS CA S +R G Q+HG L G + + F+ T L+ LYG
Sbjct: 107 RYFGYLPNQSTVSGLLS-CA-SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYG---- 160
Query: 183 DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGY 242
R +E A ++F+ M +++ TW M++
Sbjct: 161 ------------------------------RLDLLEMAEQVFEDMPFKSLETWNHMMSLL 190
Query: 243 ARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQ 302
G ++ + F ++ R L + S + L + + DL + + +H + K
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHC----SATKKGL 246
Query: 303 SLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFEL 362
IS+ N+LI Y CG A +F+ +SW +ICA AK +AL +F
Sbjct: 247 DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS 306
Query: 363 MQSLG 367
M G
Sbjct: 307 MPEHG 311
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 26/329 (7%)
Query: 43 SC-KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWN 101
SC K L Q+H G + ++ L+S Y G+ A ++F++ + + WN
Sbjct: 226 SCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 102 QMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN 161
+I A+SE+P K++ LF M PN TY +L + LL G Q+HG ++ N
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN 345
Query: 162 GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG-- 219
G + + LI+ Y G +E ++ FD + ++NIVCWN++L+ Y N +G
Sbjct: 346 GCETGIVLGNALIDFYAKCG---NLEDSRLCFDYIRDKNIVCWNALLSGY---ANKDGPI 399
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK--MRRAHVDLDQV--SLVAALS 275
+F +M++ T A C L + +R + D D V SL+ + +
Sbjct: 400 CLSLFLQMLQMGFRP-TEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 276 ACAELGD-LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK 334
+ D L L W SG + + + N + +Y+ G E+ ++ + +
Sbjct: 459 KNQLMNDALLLLDWA--------SGPTSVVPL---NIVAGIYSRRGQYHESVKLISTLEQ 507
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELM 363
+SW I A ++ Y E + +F+ M
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHM 536
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 134/337 (39%), Gaps = 71/337 (21%)
Query: 41 LQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIAS--------------------- 79
L+SC + L Q+H+ IV G+ Y+L+ L+ Y +
Sbjct: 423 LKSC-CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP 481
Query: 80 -----------GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA 128
G + K+ ++ P WN I +RS+ + + LF M +
Sbjct: 482 LNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNI 541
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
P+ T+ +LS C++ L G +HG LI + AD
Sbjct: 542 RPDKYTFVSILSLCSKLCDLTLGSSIHG----------------LITKTDFSCAD----- 580
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
VC N ++ +Y +CG++ ++F++ E+N++TWT +I+ +G
Sbjct: 581 -----------TFVC-NVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYG 628
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
++AL F + D+VS ++ L+AC G ++ G + +K+ +
Sbjct: 629 QEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLF----QKMKDYGVEPEMDH 684
Query: 309 NNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMI 344
+ + A G ++EA + R MP ++ W T +
Sbjct: 685 YRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 10/170 (5%)
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA 261
VC N+++++Y + G V A ++FD+M ERN V++ T+I GY++ G +A +F++MR
Sbjct: 51 VC-NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS--LNNALIHMYASC 319
L S V+ L +CA L D+R G +H LS K + + L+ +Y
Sbjct: 110 GY-LPNQSTVSGLLSCASL-DVRAGTQLH-----GLSLKYGLFMADAFVGTCLLCLYGRL 162
Query: 320 GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
++E A +VF MP +S +W M+ +G+ E + F + +GA+
Sbjct: 163 DLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS 212
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 140/334 (41%), Gaps = 50/334 (14%)
Query: 41 LQSCKTL--KYLSQIHTQIVIHG-FSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
L SC +L + +Q+H + +G F +++ LL Y L A +VF+++ S+
Sbjct: 121 LLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSL 180
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
WN M+ ++ + F ++ A ++ +L G + L +Q+H
Sbjct: 181 ETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCS 240
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
G + + +LI+ YG G A+R+F + G +IV WN+++ + N
Sbjct: 241 ATKKGLDCEISVVNSLISAYGKCG---NTHMAERMFQDAGSWDIVSWNAIICATAKSENP 297
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
A ++F M E G++ N + +V + VS + L +C
Sbjct: 298 LKALKLFVSMPEH----------GFSPN-------------QGTYVSVLGVSSLVQLLSC 334
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
GR IH + + I L NALI YA CG +E++ F ++ ++
Sbjct: 335 --------GRQIHGMLIKNGCETG----IVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI 382
Query: 338 ISWTTMICAFAKQGYANE----ALAIFELMQSLG 367
+ W ++ GYAN+ L++F M +G
Sbjct: 383 VCWNALL-----SGYANKDGPICLSLFLQMLQMG 411
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 160/340 (47%), Gaps = 34/340 (10%)
Query: 58 VIHGFSQKSYI-LAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKS 116
V G + K + + ++ Y G ++ A +F + +V W MI G+ ++
Sbjct: 199 VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG 258
Query: 117 VILFNQMR-AAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN 175
LF +MR + + N T + + C REG Q+HG V ++F+ +L++
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS 318
Query: 176 LY------GMAGADFGV----------------------EYAQRVFDEMGERNIVCWNSM 207
+Y G A A FGV A +F++M +++V W M
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDM 378
Query: 208 LAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
+ + G + +F M E++ +TWT MI+ + NG +AL F+KM + V +
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 268 VSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYE 327
+ + LSA A L DL G IH + K++ + +S+ N+L+ MY CG +AY+
Sbjct: 439 YTFSSVLSATASLADLIEGLQIHGRV-VKMNIVND---LSVQNSLVSMYCKCGNTNDAYK 494
Query: 328 VFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+F + + + +S+ TMI ++ G+ +AL +F +++S G
Sbjct: 495 IFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSG 534
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 161/366 (43%), Gaps = 54/366 (14%)
Query: 27 ITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH 86
++ + Q + L++ T + Q ++QI H +G+L A
Sbjct: 27 VSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHA----------------RNGNLQEAE 70
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM----------------------- 123
+F+++ N S+ W MI +A + K+ +F++M
Sbjct: 71 AIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLG 130
Query: 124 RAAE-----AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYG 178
+A E E N ++Y+ +++G R+G E E ++ V + + L++ Y
Sbjct: 131 KAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK--FRDSVASNVLLSGYL 188
Query: 179 MAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTM 238
AG A RVF M + +V +SM+ Y + G + AR +FD+M ERNV+TWT M
Sbjct: 189 RAGK---WNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAM 245
Query: 239 IAGYARNGKCRQALILFNKMRR-AHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKL 297
I GY + G LF +MR+ V ++ +L AC + R G IH +
Sbjct: 246 IDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV---- 301
Query: 298 SGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEAL 357
S + L N+L+ MY+ G + EA VF M + ++SW ++I ++ +EA
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY 361
Query: 358 AIFELM 363
+FE M
Sbjct: 362 ELFEKM 367
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
++ + G + ++F + W MI + +++ F++M E PN
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
T+S +LS A L EG Q+HGRV+ K N++N D V+
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVV----------KMNIVN-------DLSVQ---- 476
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
NS++++Y +CGN A +IF + E N+V++ TMI+GY+ NG ++A
Sbjct: 477 -------------NSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKA 523
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
L LF+ + + + + V+ +A LSAC +G + LG W Y + S +
Sbjct: 524 LKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG-W--KYFKSMKSSYNIEPGPDHYAC 580
Query: 312 LIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMICA 346
++ + G++++A + MP K + W +++ A
Sbjct: 581 MVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSA 616
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
Query: 14 YQMLLEELIPANTITTSRILQQ--HLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAK 71
++ML +E+ P N+ T S +L L L++ QIH ++V +
Sbjct: 427 HKMLQKEVCP-NSYTFSSVLSATASLADLIEGL-------QIHGRVVKMNIVNDLSVQNS 478
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L+S Y G+ A+K+F + P++ +N MI G++ + +K++ LF+ + ++ EPN
Sbjct: 479 LVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 132 LLTYSFLLSGCARSGLLREG 151
+T+ LLS C G + G
Sbjct: 539 GVTFLALLSACVHVGYVDLG 558
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 151/308 (49%), Gaps = 14/308 (4%)
Query: 45 KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMI 104
+ K I ++ G SQ +I ++S Y+ L AHKVF E+ ++ W M+
Sbjct: 19 QAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMV 78
Query: 105 RGHARSESPRKSVILFNQMRAAEAE-PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY 163
G+ P K++ L+ +M +E E N YS +L C G ++ G V+ R+
Sbjct: 79 SGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENL 138
Query: 164 YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRI 223
+V + +++++Y G + A F E+ + WN++++ Y + G ++ A +
Sbjct: 139 RGDVVLMNSVVDMYVKNGR---LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 224 FDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDL 283
F +M + NVV+W +I+G+ G R AL +M+R + LD +L L AC+ G L
Sbjct: 196 FHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 284 RLGRWIHTYIEEKLSG-KSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS--- 339
+G+ +H + + SG +S IS ALI MY++CG + A +VF N S
Sbjct: 255 TMGKQLHCCVVK--SGLESSPFAIS---ALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 340 WTTMICAF 347
W +M+ F
Sbjct: 310 WNSMLSGF 317
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 41/324 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK---NPSVTLWNQMIRGHA 108
Q+H +V G + ++ L+ Y G L+ A VF + K N SV +WN M+ G
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 109 RSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF 168
+E ++ L Q+ ++ + T S L C LR G QVH V+V+GY +
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
+ + L++L+ GN++ A ++F ++
Sbjct: 379 VGSILVDLHA----------------------------------NVGNIQDAHKLFHRLP 404
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
++++ ++ +I G ++G A LF ++ + +D DQ + L C+ L L G+
Sbjct: 405 NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQ 464
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFA 348
IH +K +S+ + + AL+ MY CG I+ +F M +R +SWT +I F
Sbjct: 465 IHGLCIKK-GYESEPVTAT---ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFG 520
Query: 349 KQGYANEALAIFELMQSLGANEAK 372
+ G EA F M ++G K
Sbjct: 521 QNGRVEEAFRYFHKMINIGIEPNK 544
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 136/311 (43%), Gaps = 38/311 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H+ +V+ G+ + + L+ + G++ AHK+F + N + ++ +IRG +S
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+ LF ++ + + S +L C+ L G+Q+HG + GY T
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT 482
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
L+++Y ++CG ++ +FD M+ER+
Sbjct: 483 ALVDMY----------------------------------VKCGEIDNGVVLFDGMLERD 508
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VV+WT +I G+ +NG+ +A F+KM ++ ++V+ + LSAC G L R +
Sbjct: 509 VVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEAR---S 565
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQ 350
+E S + ++ + G+ +EA E+ MP + + WT+++ A
Sbjct: 566 TLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTH 625
Query: 351 GYANEALAIFE 361
A I E
Sbjct: 626 KNAGLVTVIAE 636
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 41/224 (18%)
Query: 142 CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI 201
C + + GE + V+ G NVF+ N+I++Y DF R+ +
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMY----VDF------RLLSD------ 58
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA 261
A ++FD+M ERN+VTWTTM++GY +GK +A+ L+ +M +
Sbjct: 59 ------------------AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDS 100
Query: 262 HVD-LDQVSLVAALSACAELGDLRLGRWIHTYI-EEKLSGKSQSLLISLNNALIHMYASC 319
+ ++ A L AC +GD++LG ++ I +E L G + L N+++ MY
Sbjct: 101 EEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGD-----VVLMNSVVDMYVKN 155
Query: 320 GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
G + EA F+ + + S+ SW T+I + K G +EA+ +F M
Sbjct: 156 GRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM 199
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 13/257 (5%)
Query: 10 FQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYIL 69
F S L ELI + + + ++ + S +L + QIH + G+ +
Sbjct: 423 FNSLAFYLFRELIKLG-LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA 481
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
L+ Y+ G + + +F + V W +I G ++ ++ F++M E
Sbjct: 482 TALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIE 541
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEY 188
PN +T+ LLS C SGLL E + G P + +++L G AG +
Sbjct: 542 PNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGL---FQE 598
Query: 189 AQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMME---RNVVTWTTMIAGYAR 244
A + ++M E + W S+L N I +K+++ + +T++ YA
Sbjct: 599 ANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYAT 658
Query: 245 NGKCRQALILFNKMRRA 261
G Q +K+R A
Sbjct: 659 LGMWDQ----LSKVREA 671
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 157/327 (48%), Gaps = 42/327 (12%)
Query: 37 LFHLLQSCKTLKYLSQ-IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
L ++ +C++L + + IH ++ GF S + +L Y A LSA K+F E+
Sbjct: 130 LVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMY-ADSDSLSARKLFDEMSER 188
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
V W+ +IR + +S+ P + LF +M A+ EP+ +T + +L C + G V
Sbjct: 189 DVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSV 248
Query: 155 HGRVLVNGY-YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
HG + G+ +VF+ +LI++Y F V+ A RVFDE RNIV WNS+L
Sbjct: 249 HGFSIRRGFDLADVFVCNSLIDMYSKG---FDVDSAFRVFDETTCRNIVSWNSIL----- 300
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
AG+ N + +AL +F+ M + V++D+V++V+
Sbjct: 301 --------------------------AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSL 334
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
L C + IH I + ++ L ++LI Y SC ++++A V M
Sbjct: 335 LRVCKFFEQPLPCKSIHGVIIRRGYESNEVAL----SSLIDAYTSCSLVDDAGTVLDSMT 390
Query: 334 KRSNISWTTMICAFAKQGYANEALAIF 360
+ +S +TMI A G ++EA++IF
Sbjct: 391 YKDVVSCSTMISGLAHAGRSDEAISIF 417
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 152/336 (45%), Gaps = 52/336 (15%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKS-------YILAKLLSFYIASGHLLSAHKVFKEV 92
+L++C ++ I +HGFS + ++ L+ Y + SA +VF E
Sbjct: 232 VLKACTVME---DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDET 288
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
++ WN ++ G ++ +++ +F+ M E + +T LL C +
Sbjct: 289 TCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCK 348
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
+HG ++ GY E N V +S++ Y
Sbjct: 349 SIHGVIIRRGY----------------------------------ESNEVALSSLIDAYT 374
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
C V+ A + D M ++VV+ +TMI+G A G+ +A+ +F MR + +++++
Sbjct: 375 SCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NAITVIS 431
Query: 273 ALSACAELGDLRLGRWIH-TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
L+AC+ DLR +W H I L+ IS+ +++ YA CG IE A F
Sbjct: 432 LLNACSVSADLRTSKWAHGIAIRRSLAIND----ISVGTSIVDAYAKCGAIEMARRTFDQ 487
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ +++ ISWT +I A+A G ++ALA+F+ M+ G
Sbjct: 488 ITEKNIISWTVIISAYAINGLPDKALALFDEMKQKG 523
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 49/323 (15%)
Query: 14 YQMLLEELIPANTITTSRILQQ-HLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKL 72
+ ++++E + + +T +L+ F CK+ IH I+ G+ L+ L
Sbjct: 316 FHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS------IHGVIIRRGYESNEVALSSL 369
Query: 73 LSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
+ Y + + A V + V + MI G A + +++ +F MR PN
Sbjct: 370 IDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNA 426
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
+T LL+ C+ S LR + HG + N
Sbjct: 427 ITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-------------------------- 460
Query: 193 FDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQAL 252
+I S++ Y +CG +E ARR FD++ E+N+++WT +I+ YA NG +AL
Sbjct: 461 -------DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKAL 513
Query: 253 ILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI-HTYIEEKLSGKSQSLLISLNNA 311
LF++M++ + V+ +AALSAC G ++ G I + +EE Q +
Sbjct: 514 ALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHY-----SC 568
Query: 312 LIHMYASCGVIEEAYEVFRWMPK 334
++ M + G I+ A E+ + +P+
Sbjct: 569 IVDMLSRAGEIDTAVELIKNLPE 591
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 41/293 (13%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
+ FY+ G L S + F + + WN ++ G + + F+++R EPN
Sbjct: 67 IADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPN 126
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
T ++ C RS L +GE++HG V+ +G+ G+ Q
Sbjct: 127 TSTLVLVIHAC-RS-LWFDGEKIHGYVIRSGFC--------------------GISSVQ- 163
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
NS+L +Y ++ AR++FD+M ER+V++W+ +I Y ++ +
Sbjct: 164 -------------NSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVG 209
Query: 252 LILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
L LF +M A + D V++ + L AC + D+ +GR +H + + + + N
Sbjct: 210 LKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVC---N 266
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+LI MY+ ++ A+ VF R+ +SW +++ F +EAL +F LM
Sbjct: 267 SLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
NS+ YM+CG++ R FD M R+ V+W ++ G G + L F+K+R +
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
+ +LV + AC L G IH Y I G S S+ N+++ MYA +
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGIS-----SVQNSILCMYADSDSL- 176
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
A ++F M +R ISW+ +I ++ + L +F+ M
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM 216
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
++ Y G + A + F ++ ++ W +I +A + P K++ LF++M+ PN
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA-DFGVEYAQ 190
+TY LS C GL+++G + ++ + P++ + ++++ AG D VE +
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIK 587
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
+ +++ + W ++L+ G R F K++
Sbjct: 588 NLPEDV-KAGASAWGAILS---------GCRNRFKKLI 615
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 160/331 (48%), Gaps = 40/331 (12%)
Query: 35 QHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN 94
Q L + L+SC+ +S+IH +V G + + ++KLL+F + + A +F+ V N
Sbjct: 29 QKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFS-SVLDIRYASSIFEHVSN 87
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
++ ++N MIRG++ S+ P ++ +FNQ+RA + ++ L C+R + GE +
Sbjct: 88 TNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGL 147
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRC 214
HG L +G+ ++ LI+ Y + G + A++VFDEM +
Sbjct: 148 HGIALRSGFMVFTDLRNALIHFYCVCGK---ISDARKVFDEMPQ---------------- 188
Query: 215 GNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
+ VT++T++ GY + K AL LF MR++ V ++ +L++ L
Sbjct: 189 --------------SVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFL 234
Query: 275 SACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
SA ++LGDL H I+ L L + L ALI MY G I A +F
Sbjct: 235 SAISDLGDLSGAESAHVLCIKIGL-----DLDLHLITALIGMYGKTGGISSARRIFDCAI 289
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQ 364
++ ++W MI +AK G E + + M+
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 45/313 (14%)
Query: 59 IHGFSQKSYILA------KLLSFYIASGHLLSAHKVFKEV-KNPSVTLWNQMIRGHARSE 111
+HG + +S + L+ FY G + A KVF E+ ++ ++ ++ G+ +
Sbjct: 147 LHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVS 206
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++ LF MR +E N+ T LS + G L E H + G ++ + T
Sbjct: 207 KKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLIT 266
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
LI +YG + G + ARRIFD + ++
Sbjct: 267 ALIGMYG----------------------------------KTGGISSARRIFDCAIRKD 292
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VVTW MI YA+ G + + L +M+ + + + V LS+CA +GR +
Sbjct: 293 VVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD 352
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+EE + +L L AL+ MYA G++E+A E+F M + SWT MI + G
Sbjct: 353 LLEE----ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHG 408
Query: 352 YANEALAIFELMQ 364
A EA+ +F M+
Sbjct: 409 LAREAVTLFNKME 421
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 145/323 (44%), Gaps = 42/323 (13%)
Query: 54 HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESP 113
H + G +++ L+ Y +G + SA ++F V WN MI +A++
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLL 309
Query: 114 RKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNL 173
+ V L QM+ + +PN T+ LLS CA S E V GR + + ++
Sbjct: 310 EECVWLLRQMKYEKMKPNSSTFVGLLSSCAYS----EAAFV-GRTVAD------LLEEER 358
Query: 174 INLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVV 233
I L + G +++ +Y + G +E A IF++M +++V
Sbjct: 359 IALDAILG-----------------------TALVDMYAKVGLLEKAVEIFNRMKDKDVK 395
Query: 234 TWTTMIAGYARNGKCRQALILFNKMRRAHVDL--DQVSLVAALSACAELGDLRLGRWIHT 291
+WT MI+GY +G R+A+ LFNKM + + ++++ + L+AC+ G + G
Sbjct: 396 SWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFK 455
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAFAKQ 350
+ E S + + ++ + G +EEAYE+ R +P S+ +W ++ A
Sbjct: 456 RMVEAYSFTPK---VEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVY 512
Query: 351 GYANEALAIFELMQSLGANEAKP 373
G A+ ++ + +G E P
Sbjct: 513 GNADLGESVMMRLAEMG--ETHP 533
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 150/331 (45%), Gaps = 42/331 (12%)
Query: 41 LQSCKTL---KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
L++C +L Y SQIH + + + L Y G L SA +VF +++ P
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
WN +I G A + ++V +F+QMR++ P+ ++ LL + L +G Q+H
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
++ G+ ++ VC NS+L +Y C ++
Sbjct: 397 IIKWGFLADL---------------------------------TVC-NSLLTMYTFCSDL 422
Query: 218 EGARRIFDKMMER-NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+F+ + V+W T++ ++ + + L LF M + + D +++ L
Sbjct: 423 YCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRG 482
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
C E+ L+LG +H Y + Q + N LI MYA CG + +A +F M R
Sbjct: 483 CVEISSLKLGSQVHCYSLKTGLAPEQFI----KNGLIDMYAKCGSLGQARRIFDSMDNRD 538
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLG 367
+SW+T+I +A+ G+ EAL +F+ M+S G
Sbjct: 539 VVSWSTLIVGYAQSGFGEEALILFKEMKSAG 569
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 43/304 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL-WNQMIRGHARS 110
QIH+ I+ GF + LL+ Y L +F++ +N + ++ WN ++ +
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
E P + + LF M +E EP+ +T LL GC L+ G QVH L G P F+K
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
LI++Y G+ + A+R+FD M R++V W+++
Sbjct: 512 NGLIDMYAKCGS---LGQARRIFDSMDNRDVVSWSTL----------------------- 545
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
I GYA++G +ALILF +M+ A ++ + V+ V L+AC+ +G + G ++
Sbjct: 546 --------IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597
Query: 291 TYI--EEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAF 347
+ E +S + + ++ + A G + EA M + + W T++ A
Sbjct: 598 ATMQTEHGISPTKEHC-----SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Query: 348 AKQG 351
QG
Sbjct: 653 KTQG 656
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 144/292 (49%), Gaps = 41/292 (14%)
Query: 77 IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFN-QMRAAEAEPNLLTY 135
+++ +L+ V +K L N I +S R+++ F+ + + + L TY
Sbjct: 13 VSNSQILATSSVVSTIKTEE--LMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTY 70
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
L+ C+ S L +G ++H +L + + + +++++YG
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYG----------------- 113
Query: 196 MGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILF 255
+CG++ AR +FD M ERN+V++T++I GY++NG+ +A+ L+
Sbjct: 114 -----------------KCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLY 156
Query: 256 NKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
KM + + DQ + + + ACA D+ LG+ +H + + +S S LI+ NALI M
Sbjct: 157 LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV---IKLESSSHLIA-QNALIAM 212
Query: 316 YASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
Y + +A VF +P + ISW+++I F++ G+ EAL+ + M S G
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 264
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 166/359 (46%), Gaps = 44/359 (12%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILA 70
Y+ LE A ++ +I + L+ +C + + L+Q IH I+ + +
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
+LS Y G L A +VF + ++ + +I G++++ +++ L+ +M + P
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+ + ++ CA S + G+Q+H +V+ +E +
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVI-------------------------KLESSS 201
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
+++ N+++A+Y+R + A R+F + +++++W+++IAG+++ G +
Sbjct: 202 ---------HLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFE 252
Query: 251 ALILFNKMRRAHV-DLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISL 308
AL +M V ++ ++L AC+ L G IH I+ +L+G + +
Sbjct: 253 ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA----- 307
Query: 309 NNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+L MYA CG + A VF + + SW +I A GYA+EA+++F M+S G
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 122/233 (52%), Gaps = 11/233 (4%)
Query: 39 HLLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
+LL+ C +LK SQ+H + G + + +I L+ Y G L A ++F + N
Sbjct: 478 NLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
V W+ +I G+A+S +++ILF +M++A EPN +T+ +L+ C+ GL+ EG +++
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597
Query: 156 GRVLV-NGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMR 213
+ +G P + +++L AG + A+R DEM E ++V W ++L+
Sbjct: 598 ATMQTEHGISPTKEHCSCVVDLLARAGR---LNEAERFIDEMKLEPDVVVWKTLLSACKT 654
Query: 214 CGNVEGARRIFDKMMERNVVTWTT---MIAGYARNGKCRQALILFNKMRRAHV 263
GNV A++ + +++ + T + + +A +G A +L + M++ V
Sbjct: 655 QGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDV 707
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 160/359 (44%), Gaps = 62/359 (17%)
Query: 15 QMLLEELIPANTITTSRILQQHLF-HLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILA 70
+ML E+L+P Q F ++++C + + Q+H Q++ S+++A
Sbjct: 158 KMLQEDLVP----------DQFAFGSIIKACASSSDVGLGKQLHAQVI--KLESSSHLIA 205
Query: 71 K--LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRA-AE 127
+ L++ Y+ + A +VF + + W+ +I G ++ +++ +M +
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 128 AEPNLLTYSFLLSGCARSGLLRE--GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG 185
PN + L C S LLR G Q+HG + +K+ L AG
Sbjct: 266 FHPNEYIFGSSLKAC--SSLLRPDYGSQIHG----------LCIKSEL------AG---- 303
Query: 186 VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARN 245
N + S+ +Y RCG + ARR+FD++ + +W +IAG A N
Sbjct: 304 --------------NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANN 349
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
G +A+ +F++MR + D +SL + L A + L G IH+YI + G L
Sbjct: 350 GYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKW--GFLADLT 407
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAFAKQGYANEALAIFELM 363
+ N+L+ MY C + + +F ++ +SW T++ A + E L +F+LM
Sbjct: 408 VC--NSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM 464
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 155/332 (46%), Gaps = 43/332 (12%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L H L + + +HT + GF+ ++ + L+ Y+ + +A K+F E+ P+
Sbjct: 35 LVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPN 94
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAE-AEPNLLTYSFLLSGCARSGLLREGEQVH 155
V W +I G+ P+ ++ +F +M PN T++ + C+ R G+ +H
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIH 154
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM--GERNIVCWNSMLAVYMR 213
R+ ++G N+ + ++L+++YG VE A+RVFD M RN+V W
Sbjct: 155 ARLEISGLRRNIVVSSSLVDMYGKCN---DVETARRVFDSMIGYGRNVVSW--------- 202
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD--LDQVSLV 271
T+MI YA+N + +A+ LF A +Q L
Sbjct: 203 ----------------------TSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLA 240
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
+ +SAC+ LG L+ G+ H + G + +++ +L+ MYA CG + A ++F
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTR--GGYESNTVVA--TSLLDMYAKCGSLSCAEKIFLR 296
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+ S IS+T+MI A AK G A+ +F+ M
Sbjct: 297 IRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 140/327 (42%), Gaps = 53/327 (16%)
Query: 12 SSYQMLLEEL-IPANTITTSRILQQHLFHLLQSCKTL---KYLSQIHTQIVIHGFSQKSY 67
S +Q + E+ +P N T + + + +C L + IH ++ I G +
Sbjct: 116 SMFQKMHEDRPVPPNEYTFASVFK--------ACSALAESRIGKNIHARLEISGLRRNIV 167
Query: 68 ILAKLLSFYIASGHLLSAHKVFKEV--KNPSVTLWNQMIRGHARSESPRKSVILFNQMRA 125
+ + L+ Y + +A +VF + +V W MI +A++ +++ LF A
Sbjct: 168 VSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNA 227
Query: 126 A--EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGAD 183
A N + ++S C+ G L+ G+ HG V GY
Sbjct: 228 ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGY-------------------- 267
Query: 184 FGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYA 243
E N V S+L +Y +CG++ A +IF ++ +V+++T+MI A
Sbjct: 268 --------------ESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKA 313
Query: 244 RNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
++G A+ LF++M ++ + V+L+ L AC+ G + G + + EK S
Sbjct: 314 KHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDS 373
Query: 304 LLISLNNALIHMYASCGVIEEAYEVFR 330
+ ++ M G ++EAYE+ +
Sbjct: 374 RHYT---CVVDMLGRFGRVDEAYELAK 397
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 11/244 (4%)
Query: 27 ITTSRILQQHLFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLL 83
+T+ R Q L ++ +C +L L H + G+ + + LL Y G L
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 84 SAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA 143
A K+F ++ SV + MI A+ +V LF++M A PN +T +L C+
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 144 RSGLLREG-EQVHGRVLVNGYYPNVFMKTNLINLYGMAG-ADFGVEYAQRVFDEMG-ERN 200
SGL+ EG E + G P+ T ++++ G G D E A+ + E+G E+
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTI--EVGAEQG 406
Query: 201 IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIA---GYARNGKCRQALILFNK 257
+ W ++L+ G VE ++++ N + IA YA +G + L +
Sbjct: 407 ALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLE 466
Query: 258 MRRA 261
M+R+
Sbjct: 467 MKRS 470
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 150/329 (45%), Gaps = 38/329 (11%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK-NP 95
L LL L Q+H +++ G + I ++S Y G + A +VF + +
Sbjct: 154 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 213
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+ WN MI G ++ E + LF QM+ E ++ TY+ LLS C+ G+ +H
Sbjct: 214 DLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLH 273
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
G V+ G LI++Y + G
Sbjct: 274 GMVIKKGLEQVTSATNALISMY--------------------------------IQFPTG 301
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
+E A +F+ + +++++W ++I G+A+ G A+ F+ +R + + +D + A L
Sbjct: 302 TMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLR 361
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM-PK 334
+C++L L+LG+ IH + K S +IS +LI MY+ CG+IE A + F+ + K
Sbjct: 362 SCSDLATLQLGQQIHA-LATKSGFVSNEFVIS---SLIVMYSKCGIIESARKCFQQISSK 417
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELM 363
S ++W MI +A+ G +L +F M
Sbjct: 418 HSTVAWNAMILGYAQHGLGQVSLDLFSQM 446
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 150/334 (44%), Gaps = 44/334 (13%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L + S K Q+H ++ G+ Y+ + L+ Y + A + FKE+ P+
Sbjct: 52 LLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPN 111
Query: 97 VTLWNQMIRGHARSESPRKSVILFN--QMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
WN +I G + + + L +M+AA + T++ LL+ +QV
Sbjct: 112 SVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA-VTMDAGTFAPLLTLLDDPMFCNLLKQV 170
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRC 214
H +VL G + I N+M++ Y C
Sbjct: 171 HAKVLKLGL----------------------------------QHEITICNAMISSYADC 196
Query: 215 GNVEGARRIFDKMM-ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
G+V A+R+FD + +++++W +MIAG++++ A LF +M+R V+ D +
Sbjct: 197 GSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGL 256
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYA--SCGVIEEAYEVFRW 331
LSAC+ G+ +H + +K G Q + S NALI MY G +E+A +F
Sbjct: 257 LSACSGEEHQIFGKSLHGMVIKK--GLEQ--VTSATNALISMYIQFPTGTMEDALSLFES 312
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+ + ISW ++I FA++G + +A+ F ++S
Sbjct: 313 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 346
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 88 VFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGL 147
+F E+ WN MI G+ + LF M+ + ++ + ++S LL G A
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 148 LREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSM 207
GEQVHG V+ GY NV++ ++L+++Y
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYA----------------------------- 92
Query: 208 LAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR-RAHVDLD 266
+C VE A F ++ E N V+W +IAG+ + + A L M +A V +D
Sbjct: 93 -----KCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 147
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+ L+ + L + +H + KL + + I++ NA+I YA CG + +A
Sbjct: 148 AGTFAPLLTLLDDPMFCNLLKQVHAKV-LKLGLQHE---ITICNAMISSYADCGSVSDAK 203
Query: 327 EVFRWMPKRSN-ISWTTMICAFAKQGYANEALAIFELMQ 364
VF + + ISW +MI F+K A +F MQ
Sbjct: 204 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ 242
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 44/286 (15%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYI--ASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
+H ++ G Q + L+S YI +G + A +F+ +K+ + WN +I G A+
Sbjct: 272 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 331
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
+V F+ +R++E + + +S LL C+ L+ G+Q+H +G+ N F+
Sbjct: 332 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 391
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGER-NIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
++LI +Y G +E A++ F ++ + + V WN+M
Sbjct: 392 SSLIVMYSKCGI---IESARKCFQQISSKHSTVAWNAM---------------------- 426
Query: 230 RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI 289
I GYA++G + +L LF++M +V LD V+ A L+AC+ G ++ G +
Sbjct: 427 ---------ILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 477
Query: 290 HTYIEE--KLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
+E K+ + + A + + G++ +A E+ MP
Sbjct: 478 LNLMEPVYKIQPRMEHY-----AAAVDLLGRAGLVNKAKELIESMP 518
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LL+SC L L QIH GF ++++ L+ Y G + SA K F+++ +
Sbjct: 359 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 418
Query: 97 VTL-WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG-EQV 154
T+ WN MI G+A+ + S+ LF+QM + + +T++ +L+ C+ +GL++EG E +
Sbjct: 419 STVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 478
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMR 213
+ V P + ++L G AG V A+ + + M + + + L V
Sbjct: 479 NLMEPVYKIQPRMEHYAAAVDLLGRAGL---VNKAKELIESMPLNPDPMVLKTFLGVCRA 535
Query: 214 CGNVEGARRIFDKMME 229
CG +E A ++ + ++E
Sbjct: 536 CGEIEMATQVANHLLE 551
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 137/290 (47%), Gaps = 39/290 (13%)
Query: 76 YIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
Y S L A K+F+ + WN +I G+ +S S ++ LF +M++ +PN T
Sbjct: 69 YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
+L C LL GEQ+HG + G+ +V
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDV---------------------------- 160
Query: 196 MGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM-ERNVVTWTTMIAGYARNGKCRQALIL 254
N+V N +LA+Y +C + A +F+ M E+N VTWT+M+ GY++NG +A+
Sbjct: 161 ----NVV--NGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIEC 214
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
F +RR +Q + + L+ACA + R+G +H I + SG ++ + +ALI
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK--SGFKTNIYV--QSALID 270
Query: 315 MYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
MYA C +E A + M +SW +MI +QG EAL++F M
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 43/318 (13%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H IV GF Y+ + L+ Y + SA + + ++ V WN MI
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMI------- 300
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
GC R GL+ E + GR+ + F
Sbjct: 301 ----------------------------VGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 172 NLINLYGMAGADFGV-EYAQRVFDEMGERNI-VCWNSMLAVYMRCGNVEGARRIFDKMME 229
+++N + ++ + + A + + G + N+++ +Y + G ++ A ++F+ M+E
Sbjct: 333 SILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 230 RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI 289
++V++WT ++ G NG +AL LF MR + D++ + LSA AEL L G+ +
Sbjct: 393 KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQV 452
Query: 290 H-TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFA 348
H YI+ SG SL S+NN+L+ MY CG +E+A +F M R I+WT +I +A
Sbjct: 453 HGNYIK---SGFPSSL--SVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA 507
Query: 349 KQGYANEALAIFELMQSL 366
K G +A F+ M+++
Sbjct: 508 KNGLLEDAQRYFDSMRTV 525
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 158/342 (46%), Gaps = 45/342 (13%)
Query: 37 LFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK--E 91
L +L+ C +L L QIH + GF ++ LL+ Y + A +F+ E
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
+ +VT W M+ G++++ K++ F +R + N T+ +L+ CA R G
Sbjct: 188 GEKNNVT-WTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVG 246
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
QVH ++ +G+ N+++++ LI++Y
Sbjct: 247 VQVHCCIVKSGFKTNIYVQSALIDMYA--------------------------------- 273
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
+C +E AR + + M +VV+W +MI G R G +AL +F +M + +D ++
Sbjct: 274 -KCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 272 AALSACA-ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
+ L+ A ++++ H I + +G + L+ NNAL+ MYA G+++ A +VF
Sbjct: 333 SILNCFALSRTEMKIASSAHCLIVK--TGYATYKLV--NNALVDMYAKRGIMDSALKVFE 388
Query: 331 WMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
M ++ ISWT ++ G +EAL +F M+ G K
Sbjct: 389 GMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDK 430
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 19/299 (6%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRG 106
+K S H IV G++ + L+ Y G + SA KVF+ + V W ++ G
Sbjct: 345 MKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTG 404
Query: 107 HARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPN 166
+ + S +++ LF MR P+ + + +LS A LL G+QVHG + +G+ +
Sbjct: 405 NTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSS 464
Query: 167 VFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
+ + +L+ +Y G+ +E A +F+ M R+++ W ++ Y + G +E A+R FD
Sbjct: 465 LSVNNSLVTMYTKCGS---LEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDS 521
Query: 227 MMERNVVT-----WTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
M +T + MI + R+G + L ++M V+ D A L+A + G
Sbjct: 522 MRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM---EVEPDATVWKAILAASRKHG 578
Query: 282 DLRLG-RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
++ G R T +E L + + L+N MY++ G +EA V R M R NIS
Sbjct: 579 NIENGERAAKTLME--LEPNNAVPYVQLSN----MYSAAGRQDEAANVRRLMKSR-NIS 630
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 186 VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARN 245
V+ A+++FD+M ER+ WN+M+ Y + A ++F +N ++W +I+GY ++
Sbjct: 44 VDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKS 103
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
G +A LF +M+ + ++ +L + L C L L G IH + + L
Sbjct: 104 GSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK----TGFDLD 159
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMICAFAKQGYANEALAIFELMQ 364
+++ N L+ MYA C I EA +F M +++N++WT+M+ +++ G+A +A+ F ++
Sbjct: 160 VNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLR 219
Query: 365 SLG 367
G
Sbjct: 220 REG 222
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 38/316 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H V GFS+ + + ++L FY +L +F E+ +N +I +++++
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
S+ F +M+ + ++ +LS A L+ G Q+H + L
Sbjct: 331 QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL------------ 378
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+A AD + NS++ +Y +C E A IF + +R
Sbjct: 379 -------LATADSILHVG---------------NSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
V+WT +I+GY + G L LF KMR +++ DQ + L A A L LG+ +H
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+I SG +++ + L+ MYA CG I++A +VF MP R+ +SW +I A A G
Sbjct: 477 FIIR--SGNLENVFS--GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNG 532
Query: 352 YANEALAIFELMQSLG 367
A+ F M G
Sbjct: 533 DGEAAIGAFAKMIESG 548
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 139/322 (43%), Gaps = 42/322 (13%)
Query: 50 LSQIHTQIVIHGFSQKSYILAK--LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGH 107
+ Q+H V GF ++ LL Y L A +F+E+ +N +I G+
Sbjct: 166 VGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 108 ARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
+ +S+ LF +MR + +P+ T+S +L G+Q+H + G+ +
Sbjct: 226 EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDA 285
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
+ +++ Y V + +FDEM E + V +N
Sbjct: 286 SVGNQILDFYSKHDR---VLETRMLFDEMPELDFVSYN---------------------- 320
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
+I+ Y++ + +L F +M+ D LS A L L++GR
Sbjct: 321 ---------VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
+H + L + S+L + N+L+ MYA C + EEA +F+ +P+R+ +SWT +I +
Sbjct: 372 QLHC---QALLATADSIL-HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 348 AKQGYANEALAIFELMQSLGAN 369
++G L +F M+ G+N
Sbjct: 428 VQKGLHGAGLKLFTKMR--GSN 447
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
Query: 186 VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARN 245
V A++V+DEM +N V N+M++ +++ G+V AR +FD M +R VVTWT ++ YARN
Sbjct: 64 VSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARN 123
Query: 246 GKCRQALILFNKM-RRAHVDL-DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
+A LF +M R + L D V+ L C + +H + KL G +
Sbjct: 124 SHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFA-VKL-GFDTN 181
Query: 304 LLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
++++N L+ Y ++ A +F +P++ ++++ T+I + K G E++ +F M
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 364 QSLG 367
+ G
Sbjct: 242 RQSG 245
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 34/241 (14%)
Query: 46 TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIR 105
+L+ Q+H Q ++ ++ L+ Y A +FK + + W +I
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP 165
G+ + + LF +MR + + T++ +L A L G+Q+H ++ +G
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE 485
Query: 166 NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFD 225
NVF + L+++Y +CG+++ A ++F+
Sbjct: 486 NVFSGSGLVDMYA----------------------------------KCGSIKDAVQVFE 511
Query: 226 KMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRL 285
+M +RN V+W +I+ +A NG A+ F KM + + D VS++ L+AC+ G +
Sbjct: 512 EMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQ 571
Query: 286 G 286
G
Sbjct: 572 G 572
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 133/298 (44%), Gaps = 38/298 (12%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAE- 129
++S ++ +G + SA +F + + +V W ++ +AR+ ++ LF QM R++
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
P+ +T++ LL GC + QVH + G+ N F+ +
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS----------------- 187
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
N +L Y ++ A +F+++ E++ VT+ T+I GY ++G
Sbjct: 188 ---------------NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYT 232
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
+++ LF KMR++ + L A L D LG+ +H +G S+ S+
Sbjct: 233 ESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHAL--SVTTGFSRD--ASVG 288
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
N ++ Y+ + E +F MP+ +S+ +I ++++ +L F MQ +G
Sbjct: 289 NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H I+ G + + + L+ Y G + A +VF+E+ + + WN +I HA +
Sbjct: 473 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNG 532
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG-EQVHGRVLVNGYYPNVFMK 170
++ F +M + +P+ ++ +L+ C+ G + +G E + G P
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY 592
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKM-- 227
+++L G G A+++ DEM E + + W+S+L N A R +K+
Sbjct: 593 ACMLDLLGRNGR---FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 649
Query: 228 ME--RNVVTWTTMIAGYARNGKCRQALILFNKMR 259
ME R+ + +M YA G+ + + MR
Sbjct: 650 MEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMR 683
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 150/314 (47%), Gaps = 12/314 (3%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYI--ASGHLLSAHKVFKEVKNPSVTLWNQMIRGHAR 109
QIH IV GF ++ L+S Y + K+F E+ V WN ++ +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 110 SESPRKSVILFNQMRAAEA-EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF 168
K+ LF +M E + T S LLS C S +L G ++HGR + G +
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
+ LI Y + ++ + +++ M ++ V + M+ YM G V+ A IF +
Sbjct: 322 VNNALIGFYSKF---WDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
E+N +T+ ++AG+ RNG +AL LF M + V+L SL +A+ AC + + ++
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQ 438
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR--SNISWTTMICA 346
IH + + + + + AL+ M C + +A E+F P S+ + T++I
Sbjct: 439 IHGFCIKFGTAFNP----CIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGG 494
Query: 347 FAKQGYANEALAIF 360
+A+ G ++A+++F
Sbjct: 495 YARNGLPDKAVSLF 508
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 46/315 (14%)
Query: 63 SQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQ 122
+Q + ++++ Y++ G + SA ++F V + +N ++ G R+ K++ LF
Sbjct: 348 AQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTD 407
Query: 123 MRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA 182
M E + + + C + EQ+HG + G N ++T L+++
Sbjct: 408 MLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDM------ 461
Query: 183 DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM---MERNVVTWTTMI 239
C RC + A +FD+ ++ + T T++I
Sbjct: 462 --------------------C--------TRCERMADAEEMFDQWPSNLDSSKAT-TSII 492
Query: 240 AGYARNGKCRQALILFNK-MRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLS 298
GYARNG +A+ LF++ + + LD+VSL L+ C LG +G IH Y + +
Sbjct: 493 GGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALK--A 550
Query: 299 GKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALA 358
G ISL N+LI MYA C ++A ++F M + ISW ++I + Q +EALA
Sbjct: 551 GYFSD--ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALA 608
Query: 359 IFELMQSLGANEAKP 373
++ M E KP
Sbjct: 609 LWSRMNE---KEIKP 620
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 137/299 (45%), Gaps = 38/299 (12%)
Query: 64 QKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM 123
+K+ + L+S Y+ G A VF + +P+V + +I G +R +++ +F +M
Sbjct: 112 EKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRM 171
Query: 124 RAAE-AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA 182
R A +PN T+ +L+ C R G Q+HG ++ +G+ +VF+ +L++LY
Sbjct: 172 RKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG 231
Query: 183 DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGY 242
+ ++FDE+ +R++ WN T+++
Sbjct: 232 S-SCDDVLKLFDEIPQRDVASWN-------------------------------TVVSSL 259
Query: 243 ARNGKCRQALILFNKMRRAH-VDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKS 301
+ GK +A LF +M R +D +L LS+C + L GR +H G
Sbjct: 260 VKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHG--RAIRIGLM 317
Query: 302 QSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
Q L S+NNALI Y+ +++ ++ M + +++T MI A+ G + A+ IF
Sbjct: 318 QEL--SVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIF 374
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 193 FDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQAL 252
F ++ E N++++ Y++ G A +F + VV++T +I+G++R +AL
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 253 ILFNKMRRAH-VDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
+F +MR+A V ++ + VA L+AC + LG IH I + SG S+ +S N+
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVK--SGFLNSVFVS--NS 221
Query: 312 LIHMY-----ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
L+ +Y +SC ++ ++F +P+R SW T++ + K+G +++A +F
Sbjct: 222 LMSLYDKDSGSSC---DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLF 272
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 123/309 (39%), Gaps = 66/309 (21%)
Query: 48 KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN--PSVTLWNQMIR 105
K QIH + G + I LL + A ++F + + S +I
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIG 493
Query: 106 GHARSESPRKSVILFNQMRAAEAE-PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
G+AR+ P K+V LF++ + + ++ + +L+ C G G Q+H L GY+
Sbjct: 494 GYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYF 553
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIF 224
++ + NS++++Y +C + + A +IF
Sbjct: 554 SDISLG----------------------------------NSLISMYAKCCDSDDAIKIF 579
Query: 225 DKMMERNVVTWTTMIAGY--ARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD 282
+ M E +V++W ++I+ Y RNG +AL L+++M + D ++L +SA
Sbjct: 580 NTMREHDVISWNSLISCYILQRNGD--EALALWSRMNEKEIKPDIITLTLVISA------ 631
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLN------------NALIHMYASCGVIEEAYEVFR 330
Y E + L +S+ A + + G++EEA +
Sbjct: 632 -------FRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTIN 684
Query: 331 WMPKRSNIS 339
MP + +S
Sbjct: 685 SMPVQPEVS 693
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 44/329 (13%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L L +K Q+H +V G + L+ FY G ++ A +VF+ V +
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAE--PNLLTYSFLLSGCARSGLLREGEQV 154
+ LWN ++ + + ++ L M + + + T+S LLS C + +G+Q+
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQI 263
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRC 214
H + Y ++ + T L+N+Y +
Sbjct: 264 HAILFKVSYQFDIPVATALLNMYA----------------------------------KS 289
Query: 215 GNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
++ AR F+ M+ RNVV+W MI G+A+NG+ R+A+ LF +M ++ D+++ + L
Sbjct: 290 NHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVL 349
Query: 275 SACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK 334
S+CA+ + W ++ ++ K + +S+ N+LI Y+ G + EA F + +
Sbjct: 350 SSCAKFSAI----WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE 405
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELM 363
+SWT++I A A G+A E+L +FE M
Sbjct: 406 PDLVSWTSVIGALASHGFAEESLQMFESM 434
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 43/296 (14%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
LL +C+ ++ QIH + + + LL+ Y S HL A + F+ + +V
Sbjct: 251 LLSACR-IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVS 309
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
WN MI G A++ R+++ LF QM +P+ LT++ +LS CA+ + E +QV V
Sbjct: 310 WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVT 369
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
G ADF + NS+++ Y R GN+
Sbjct: 370 KKG------------------SADF----------------LSVANSLISSYSRNGNLSE 395
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
A F + E ++V+WT++I A +G ++L +F M + + D+++ + LSAC+
Sbjct: 396 ALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSH 454
Query: 280 LGDLRLGRWIHTYIEE--KLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
G ++ G + E K+ + + LI + G I+EA +V MP
Sbjct: 455 GGLVQEGLRCFKRMTEFYKIEAEDEHY-----TCLIDLLGRAGFIDEASDVLNSMP 505
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 143/342 (41%), Gaps = 64/342 (18%)
Query: 46 TLKYLSQI---HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQ 102
+L +LS + H +V G ++ KLL Y A K+F E+ ++ WN
Sbjct: 48 SLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNI 107
Query: 103 MIRGHARSESPRK----------SVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
+I G + + S ILF + + +++ L+ C S ++ G
Sbjct: 108 LIHGVIQRDGDTNHRAHLGFCYLSRILF-----TDVSLDHVSFMGLIRLCTDSTNMKAGI 162
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
Q+H ++ G + F T+L++ YG
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYG---------------------------------- 188
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM--RRAHVDLDQVSL 270
+CG + ARR+F+ +++R++V W +++ Y NG +A L M + D +
Sbjct: 189 KCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTF 248
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
+ LSAC + G+ IH L S I + AL++MYA + +A E F
Sbjct: 249 SSLLSACR----IEQGKQIHAI----LFKVSYQFDIPVATALLNMYAKSNHLSDARECFE 300
Query: 331 WMPKRSNISWTTMICAFAKQGYANEALAIFE--LMQSLGANE 370
M R+ +SW MI FA+ G EA+ +F L+++L +E
Sbjct: 301 SMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE 342
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 154/338 (45%), Gaps = 46/338 (13%)
Query: 40 LLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L++C + Y +H V Y+ + LL Y G + + +VF E+ +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
W +I G + ++ + F++M +E + T++ L CA ++ G+ +H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
V+V G+ + + NS+ +Y CG
Sbjct: 234 HVIVRGFVTTLCVA----------------------------------NSLATMYTECGE 259
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
++ +F+ M ER+VV+WT++I Y R G+ +A+ F KMR + V ++ + + SA
Sbjct: 260 MQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSA 319
Query: 277 CAELGDLRLGRWIHTYIEEKLS-GKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
CA L L G +H + LS G + SL S++N+++ MY++CG + A +F+ M R
Sbjct: 320 CASLSRLVWGEQLHCNV---LSLGLNDSL--SVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
ISW+T+I + + G+ E F M+ G KP
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG---TKP 409
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 148/330 (44%), Gaps = 41/330 (12%)
Query: 41 LQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
L++C + +KY IHT +++ GF + L + Y G + +F+ + V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
W +I + R K+V F +MR ++ PN T++ + S CA L GEQ+H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
VL G ++ + NSM+ +Y CGN+
Sbjct: 336 VLSLGLNDSLSVS----------------------------------NSMMKMYSTCGNL 361
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
A +F M R++++W+T+I GY + G + F+ MR++ +L + LS
Sbjct: 362 VSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVS 421
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
+ + GR +H G Q+ ++ ++LI+MY+ CG I+EA +F +
Sbjct: 422 GNMAVIEGGRQVHAL--ALCFGLEQNS--TVRSSLINMYSKCGSIKEASMIFGETDRDDI 477
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+S T MI +A+ G + EA+ +FE +G
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVG 507
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 77 IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAE--AEPNLLT 134
I +G+L +A +VF ++ + + W +I+ + + + +++ILF+ MR + P+
Sbjct: 51 INAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
S +L C +S + GE +H + +V++ ++L+++Y G ++ + RVF
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGK---IDKSCRVFS 167
Query: 195 EMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALIL 254
EM RN VTWT +I G G+ ++ L
Sbjct: 168 EMPFRN-------------------------------AVTWTAIITGLVHAGRYKEGLTY 196
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
F++M R+ D + AL ACA L ++ G+ IHT++ + G +L ++ N+L
Sbjct: 197 FSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV--IVRGFVTTLCVA--NSLAT 252
Query: 315 MYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
MY CG +++ +F M +R +SWT++I A+ + G +A+ F M++
Sbjct: 253 MYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 140/322 (43%), Gaps = 41/322 (12%)
Query: 34 QQHLFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
+Q + +C +L L Q+H ++ G + + ++ Y G+L+SA +F+
Sbjct: 310 EQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ 369
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE 150
++ + W+ +I G+ ++ + F+ MR + +P + LLS ++
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEG 429
Query: 151 GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAV 210
G QVH L G N ++++LIN+Y
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYS-------------------------------- 457
Query: 211 YMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSL 270
+CG+++ A IF + ++V+ T MI GYA +GK ++A+ LF K + D V+
Sbjct: 458 --KCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
++ L+AC G L LG ++E + + ++ + G + +A ++
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQETYNMRPAK---EHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 331 WMP-KRSNISWTTMICAFAKQG 351
M K+ ++ WTT++ A +G
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKG 594
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAH-- 262
NS L + GN+ AR++FDKM ++V+WT++I Y +ALILF+ MR
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 263 VDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS--LNNALIHMYASCG 320
V D L L AC + ++ G +H Y SLL S + ++L+ MY G
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAY------AVKTSLLSSVYVGSSLLDMYKRVG 157
Query: 321 VIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
I+++ VF MP R+ ++WT +I G E L F M
Sbjct: 158 KIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEM 200
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 151/327 (46%), Gaps = 22/327 (6%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+ ++C +K LS QI+ + S + + Y L A +VF E++
Sbjct: 346 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 405
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
WN +I H ++ +++ LF M + EP+ T+ +L C G L G ++H
Sbjct: 406 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHS 464
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
++ +G N + +LI++Y G +E A+++ +R V G
Sbjct: 465 SIVKSGMASNSSVGCSLIDMYSKCGM---IEEAEKIHSRFFQRANVS-----------GT 510
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+E ++ +K ++ V+W ++I+GY + A +LF +M + D+ + L
Sbjct: 511 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 570
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
CA L LG+ IH + +K + QS + + + L+ MY+ CG + ++ +F +R
Sbjct: 571 CANLASAGLGKQIHAQVIKK---ELQSD-VYICSTLVDMYSKCGDLHDSRLMFEKSLRRD 626
Query: 337 NISWTTMICAFAKQGYANEALAIFELM 363
++W MIC +A G EA+ +FE M
Sbjct: 627 FVTWNAMICGYAHHGKGEEAIQLFERM 653
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 121/227 (53%), Gaps = 7/227 (3%)
Query: 142 CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI 201
CA+ G L G+Q H ++++G+ P F+ L+ +Y DF A VFD+M R++
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVY-TNSRDF--VSASMVFDKMPLRDV 72
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA 261
V WN M+ Y + ++ A F+ M R+VV+W +M++GY +NG+ +++ +F M R
Sbjct: 73 VSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 132
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV 321
++ D + L C+ L D LG IH + G ++ + +AL+ MYA
Sbjct: 133 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR--VGCDTDVVAA--SALLDMYAKGKR 188
Query: 322 IEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
E+ VF+ +P+++++SW+ +I + + AL F+ MQ + A
Sbjct: 189 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 235
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 157/356 (44%), Gaps = 62/356 (17%)
Query: 40 LLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L+SC L L Q+H + F+ + L Y ++ A +F +N +
Sbjct: 245 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 304
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+N MI G+++ E K+++LF+++ ++ + ++ S + CA L EG Q++G
Sbjct: 305 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 364
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ + +V + I++YG +C
Sbjct: 365 LAIKSSLSLDVCVANAAIDMYG----------------------------------KCQA 390
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+ A R+FD+M R+ V+W +IA + +NGK + L LF M R+ ++ D+ + + L A
Sbjct: 391 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 450
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
C G L G IH+ I + SG + + S+ +LI MY+ CG+IEEA ++ +R+
Sbjct: 451 CTG-GSLGYGMEIHSSIVK--SGMASN--SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA 505
Query: 337 N--------------------ISWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
N +SW ++I + + + +A +F M +G K
Sbjct: 506 NVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDK 561
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 146/328 (44%), Gaps = 60/328 (18%)
Query: 40 LLQSCK--TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKV---FKEVKN 94
+L++C +L Y +IH+ IV G + S + L+ Y G + A K+ F + N
Sbjct: 447 ILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 506
Query: 95 PSVTL-----------------WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSF 137
S T+ WN +I G+ E + +LF +M P+ TY+
Sbjct: 507 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 566
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
+L CA G+Q+H +V+ +V++ + L+++Y
Sbjct: 567 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS------------------- 607
Query: 198 ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK 257
+CG++ +R +F+K + R+ VTW MI GYA +GK +A+ LF +
Sbjct: 608 ---------------KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 652
Query: 258 MRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYA 317
M ++ + V+ ++ L ACA +G + G + Y+ ++ G L N ++ +
Sbjct: 653 MILENIKPNHVTFISILRACAHMGLIDKG-LEYFYMMKRDYGLDPQLPHYSN--MVDILG 709
Query: 318 SCGVIEEAYEVFRWMP-KRSNISWTTMI 344
G ++ A E+ R MP + ++ W T++
Sbjct: 710 KSGKVKRALELIREMPFEADDVIWRTLL 737
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 141/325 (43%), Gaps = 43/325 (13%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L+ C L+ S QIH +V G + LL Y + + +VF+ + +
Sbjct: 144 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
W+ +I G ++ ++ F +M+ A + Y+ +L CA LR G Q+H
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
L + + + ++T +++Y +C N
Sbjct: 264 HALKSDFAADGIVRTATLDMYA----------------------------------KCDN 289
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
++ A+ +FD N ++ MI GY++ +AL+LF+++ + + D++SL A
Sbjct: 290 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 349
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQ-SLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
CA + L G I+ L+ KS SL + + NA I MY C + EA+ VF M +R
Sbjct: 350 CALVKGLSEGLQIYG-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR 404
Query: 336 SNISWTTMICAFAKQGYANEALAIF 360
+SW +I A + G E L +F
Sbjct: 405 DAVSWNAIIAAHEQNGKGYETLFLF 429
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 161/348 (46%), Gaps = 36/348 (10%)
Query: 37 LFHLLQSCK-----TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKE 91
L H+ +S + L+ Q H ++I GF +++L LL Y S +SA VF +
Sbjct: 7 LLHMTRSVECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 66
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG----- 146
+ V WN+MI G+++S K+ FN M ++++++ +LSG ++G
Sbjct: 67 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV----RDVVSWNSMLSGYLQNGESLKS 122
Query: 147 ------LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERN 200
+ REG + GR + +K + G++ V + +
Sbjct: 123 IEVFVDMGREGIEFDGRTFA------IILKVCSF----LEDTSLGMQIHGIVVRVGCDTD 172
Query: 201 IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRR 260
+V +++L +Y + + R+F + E+N V+W+ +IAG +N AL F +M++
Sbjct: 173 VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQK 232
Query: 261 AHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASC 319
+ + Q + L +CA L +LRLG +H + ++ + + A + MYA C
Sbjct: 233 VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG-----IVRTATLDMYAKC 287
Query: 320 GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+++A +F + S+ MI ++++ + +AL +F + S G
Sbjct: 288 DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 335
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 144/316 (45%), Gaps = 38/316 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H +V+ G + I LLS Y G A K+F+ + WN MI G+ +S
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+S+ F +M ++ P+ +T+S LL ++ L +Q+H ++ + ++F+ +
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
LI+ Y +C V A+ IF + +
Sbjct: 380 ALID----------------------------------AYFKCRGVSMAQNIFSQCNSVD 405
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VV +T MI+GY NG +L +F + + + ++++LV+ L L L+LGR +H
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
+I +K ++ A+I MYA CG + AYE+F + KR +SW +MI A+
Sbjct: 466 FIIKKGFDNR----CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 352 YANEALAIFELMQSLG 367
+ A+ IF M G
Sbjct: 522 NPSAAIDIFRQMGVSG 537
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 46/351 (13%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
Y+M+ ++P + IT S +L + + L+Y QIH I+ H S ++ + L+
Sbjct: 329 YEMISSGVLP-DAITFSSLLPS-----VSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y + A +F + + V ++ MI G+ + S+ +F + + PN +
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
T +L L+ G ++HG ++ G F
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKG------------------------------F 472
Query: 194 DEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
D NI C +++ +Y +CG + A IF+++ +R++V+W +MI A++ A+
Sbjct: 473 DN--RCNIGC--AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAID 528
Query: 254 LFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNAL 312
+F +M + + D VS+ AALSACA L G+ IH + I+ L+ S + L
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS-----ESTL 583
Query: 313 IHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
I MYA CG ++ A VF+ M +++ +SW ++I A G ++L +F M
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 155/358 (43%), Gaps = 58/358 (16%)
Query: 17 LLEELIPANTITTSRILQQHLFHLLQSCKT---LKYLSQIHTQIVIHGFSQKSYILAKLL 73
LEE IP + L LLQ+C L+ Q+H ++++ S SY ++L
Sbjct: 29 FLEETIP-----------RRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERIL 77
Query: 74 SFYIASGHLLSAHKVFK--EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
Y G K+F +++ S+ WN +I
Sbjct: 78 GMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSII--------------------------- 110
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADF-GVEYAQ 190
S R+GLL + + ++L G P+V L+ +A +F G+++
Sbjct: 111 --------SSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA-CVALKNFKGIDFLS 161
Query: 191 RVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
+G + N +S++ Y+ G ++ ++FD++++++ V W M+ GYA+ G
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
+ F+ MR + + V+ LS CA + LG +H + +SG S+
Sbjct: 222 SVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV--VVSG--VDFEGSIK 277
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
N+L+ MY+ CG ++A ++FR M + ++W MI + + G E+L F M S G
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 153/335 (45%), Gaps = 44/335 (13%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
++ L++ I N IT IL ++ LK ++H I+ GF + I ++
Sbjct: 429 FRWLVKVKISPNEITLVSILP-----VIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y G + A+++F+ + + WN MI A+S++P ++ +F QM + + +
Sbjct: 484 DMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
+ S LS CA G+ +HG ++ + +V+ ++ LI++Y G ++ A VF
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG---NLKAAMNVF 600
Query: 194 DEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
M E+NIV WNS++A CGN +GK + +L
Sbjct: 601 KTMKEKNIVSWNSIIAA---CGN----------------------------HGKLKDSLC 629
Query: 254 LFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
LF++M ++ + DQ++ + +S+C +GD+ G + E + Q + +
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA---CV 686
Query: 313 IHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICA 346
+ ++ G + EAYE + MP + W T++ A
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 41/320 (12%)
Query: 41 LQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLW 100
L++ K + +LS + + G ++ + L+ Y+ G + K+F V +W
Sbjct: 151 LKNFKGIDFLSDTVSSL---GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIW 207
Query: 101 NQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLV 160
N M+ G+A+ + + F+ MR + PN +T+ +LS CA L+ G Q+HG V+V
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVV 267
Query: 161 NGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGA 220
+G +K +L+++Y G + A ++F M + V WN M+
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGR---FDDASKLFRMMSRADTVTWNCMI------------ 312
Query: 221 RRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAEL 280
+GY ++G ++L F +M + V D ++ + L + ++
Sbjct: 313 -------------------SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 281 GDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISW 340
+L + IH YI S SL I L +ALI Y C + A +F + +
Sbjct: 354 ENLEYCKQIHCYIMR----HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 341 TTMICAFAKQGYANEALAIF 360
T MI + G ++L +F
Sbjct: 410 TAMISGYLHNGLYIDSLEMF 429
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 154/312 (49%), Gaps = 43/312 (13%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGH---LLSAHKVFKEVKNPSVTLWNQMIRGHA 108
Q H +++ GF Q S++ + L+ FY G + + KVF+E+ +P + +WN MI G++
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYS 320
Query: 109 RSES-PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
+E ++V F QM+ P+ ++ + S C+ + +Q+HG + + + P+
Sbjct: 321 MNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG-LAIKSHIPSN 379
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
+ N N+++++Y + GN++ AR +FD+M
Sbjct: 380 RISVN--------------------------------NALISLYYKSGNLQDARWVFDRM 407
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
E N V++ MI GYA++G +AL+L+ +M + + ++++ VA LSACA G + G+
Sbjct: 408 PELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQ 467
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMICA 346
++E + ++ S +I + G +EEA MP K +++W ++ A
Sbjct: 468 EYFNTMKETFKIEPEAEHYS---CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Query: 347 FAKQGYANEALA 358
K + N ALA
Sbjct: 525 CRK--HKNMALA 534
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 150/330 (45%), Gaps = 44/330 (13%)
Query: 44 CKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVF---KEVKNPSVTLW 100
C + + Q+H V GF S + +++Y G L A VF E+++ W
Sbjct: 151 CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDE--VSW 208
Query: 101 NQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLV 160
N MI + + + K++ L+ +M + ++ T + +L+ L G Q HG+++
Sbjct: 209 NSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK 268
Query: 161 NGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGA 220
G++ N + + LI+ Y G C + +
Sbjct: 269 AGFHQNSHVGSGLIDFYSKCGG-------------------------------CDGMYDS 297
Query: 221 RRIFDKMMERNVVTWTTMIAGYARNGK-CRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
++F +++ ++V W TMI+GY+ N + +A+ F +M+R D S V SAC+
Sbjct: 298 EKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQ--SLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
L + IH L+ KS S IS+NNALI +Y G +++A VF MP+ +
Sbjct: 358 LSSPSQCKQIHG-----LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNA 412
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+S+ MI +A+ G+ EAL +++ M G
Sbjct: 413 VSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 11/229 (4%)
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
LL A L G+ +H + + + ++ + +NLY G + YA+ F
Sbjct: 13 DLLLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGR---LSYARAAFYS 68
Query: 196 MGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILF 255
E N+ +N ++ Y + + AR++FD++ + + V++ T+I+GYA + A++LF
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLF 128
Query: 256 NKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
+MR+ ++D +L ++AC + DL + +H + +SG S S+NNA +
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCF---SVSGGFDS-YSSVNNAFVTY 182
Query: 316 YASCGVIEEAYEVFRWMPK-RSNISWTTMICAFAKQGYANEALAIFELM 363
Y+ G++ EA VF M + R +SW +MI A+ + +ALA+++ M
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 150/357 (42%), Gaps = 53/357 (14%)
Query: 18 LEELIPANTITTSRILQQHLFHLLQSCKTLKYL-SQIHTQIVIHGFSQKSYILAKLLSFY 76
L L + + +S L H +L C L Y + ++ + FS + A Y
Sbjct: 30 LHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA-----Y 84
Query: 77 IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
+ A ++F E+ P +N +I G+A + +++LF +MR E + T S
Sbjct: 85 AKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 137 FLLSGCA-RSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
L++ C R L+++ ++ + ++G FD
Sbjct: 145 GLIAACCDRVDLIKQ-----------------------LHCFSVSGG----------FDS 171
Query: 196 MGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME-RNVVTWTTMIAGYARNGKCRQALIL 254
N N+ + Y + G + A +F M E R+ V+W +MI Y ++ + +AL L
Sbjct: 172 YSSVN----NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALAL 227
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
+ +M +D +L + L+A L L GR H + + +G Q+ + + LI
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK--AGFHQNSHV--GSGLID 283
Query: 315 MYASCGVIEEAYE---VFRWMPKRSNISWTTMICAFA-KQGYANEALAIFELMQSLG 367
Y+ CG + Y+ VF+ + + W TMI ++ + + EA+ F MQ +G
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIG 340
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 149/328 (45%), Gaps = 44/328 (13%)
Query: 42 QSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWN 101
+S K++++L+++ GF +L SG + + ++F + PSV+ WN
Sbjct: 296 RSDKSVEFLTRMRDS----GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWN 351
Query: 102 QMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVN 161
M+ G++ E +++ F QM+ +P+ T S +LS CAR L G+Q+HG V+
Sbjct: 352 AMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT 411
Query: 162 GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE-MGERNIVCWNSMLAVYMRCGNVEGA 220
N + + LI +Y +E ++ +FD+ + E +I CWNS
Sbjct: 412 EISKNSHIVSGLIAVYSECEK---MEISECIFDDCINELDIACWNS-------------- 454
Query: 221 RRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL-DQVSLVAALSACAE 279
MI+G+ N +ALILF +M + V ++ S LS+C+
Sbjct: 455 -----------------MISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 497
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
L L GR H + + SG + AL MY CG I+ A + F + +++ +
Sbjct: 498 LCSLLHGRQFHGLVVK--SGYVSDSFV--ETALTDMYCKCGEIDSARQFFDAVLRKNTVI 553
Query: 340 WTTMICAFAKQGYANEALAIFELMQSLG 367
W MI + G +EA+ ++ M S G
Sbjct: 554 WNEMIHGYGHNGRGDEAVGLYRKMISSG 581
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 162 GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGAR 221
G + ++ L++LY G +YA++VFDEM R++ WN+ L + G++ A
Sbjct: 2 GMKSDTYLCNRLLDLYIECGDG---DYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEAC 58
Query: 222 RIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
+FD M ER+VV+W MI+ R G +AL+++ +M + +L + LSAC+++
Sbjct: 59 EVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVL 118
Query: 282 DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCG-VIEEAYEVFRWMPKRSNISW 340
D G H + +G +++ + NAL+ MYA CG +++ VF + + + +S+
Sbjct: 119 DGVFGMRCHGVAVK--TGLDKNIFV--GNALLSMYAKCGFIVDYGVRVFESLSQPNEVSY 174
Query: 341 TTMICAFAKQGYANEALAIFELMQSLG 367
T +I A++ EA+ +F LM G
Sbjct: 175 TAVIGGLARENKVLEAVQMFRLMCEKG 201
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 52/358 (14%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAK 71
QM + L P T L +L SC L++L QIH ++ S+ S+I++
Sbjct: 372 QMQFQNLKPDKTT---------LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSG 422
Query: 72 LLSFYIASGHLLSAHKVFKEVKNP-SVTLWNQMIRGHARSESPRKSVILFNQM-RAAEAE 129
L++ Y + + +F + N + WN MI G + K++ILF +M + A
Sbjct: 423 LIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLC 482
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
PN +++ +LS C+R L G Q HG V+ +GY + F++T L ++Y G ++ A
Sbjct: 483 PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGE---IDSA 539
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
++ FD + +N V WN MI GY NG+
Sbjct: 540 RQFFDAVLRKNTVIWNE-------------------------------MIHGYGHNGRGD 568
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
+A+ L+ KM + D ++ V+ L+AC+ G + G I + + +++ G L +
Sbjct: 569 EAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM-QRIHGIEPELDHYI- 626
Query: 310 NALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMICAFAKQGYANEALAIFELMQSL 366
++ G +E+A ++ P K S++ W ++ + G + A + E + L
Sbjct: 627 -CIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRL 683
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 149/318 (46%), Gaps = 19/318 (5%)
Query: 61 GFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILF 120
G +Y+ +LL YI G A KVF E+ V WN + + ++ +F
Sbjct: 2 GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61
Query: 121 NQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYG-M 179
+ M E ++++++ ++S R G + V+ R++ +G+ P+ F ++++ +
Sbjct: 62 DGM----PERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKV 117
Query: 180 AGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN-VEGARRIFDKMMERNVVTWTTM 238
FG+ ++NI N++L++Y +CG V+ R+F+ + + N V++T +
Sbjct: 118 LDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAV 177
Query: 239 IAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS------ACAELGDL---RLGRWI 289
I G AR K +A+ +F M V +D V L LS C L ++ LG+ I
Sbjct: 178 IGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQI 237
Query: 290 HTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAK 349
H G + LNN+L+ +YA + A +F MP+ + +SW MI F +
Sbjct: 238 HCLALRLGFGGD----LHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 293
Query: 350 QGYANEALAIFELMQSLG 367
+ +++++ M+ G
Sbjct: 294 EYRSDKSVEFLTRMRDSG 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 61/363 (16%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLS-AHKVFKEVKNPSVTLWNQMIRGHARS 110
+ H V G + ++ LLS Y G ++ +VF+ + P+ + +I G AR
Sbjct: 125 RCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARE 184
Query: 111 ESPRKSVILFNQM--RAAEAEP----NLLTYSFLLSGCARSGLLRE------GEQVHGRV 158
++V +F M + + + N+L+ S GC L E G+Q+H
Sbjct: 185 NKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDS---LSEIYGNELGKQIHCLA 241
Query: 159 LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWN------------- 205
L G+ ++ + +L+ +Y + + A+ +F EM E N+V WN
Sbjct: 242 LRLGFGGDLHLNNSLLEIYA---KNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 298
Query: 206 ----------------------SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYA 243
S+L R G+VE RRIF + + +V W M++GY+
Sbjct: 299 KSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYS 358
Query: 244 RNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH-TYIEEKLSGKSQ 302
+A+ F +M+ ++ D+ +L LS+CA L L G+ IH I ++S S
Sbjct: 359 NYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSH 418
Query: 303 SLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAKQGYANEALAIFE 361
+ + LI +Y+ C +E + +F +I+ W +MI F +AL +F
Sbjct: 419 -----IVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFR 473
Query: 362 LMQ 364
M
Sbjct: 474 RMH 476
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 157/373 (42%), Gaps = 51/373 (13%)
Query: 2 LILLFTVHFQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHG 61
LI H +S + + L+ N + +F K + H VI G
Sbjct: 136 LIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILG 195
Query: 62 FSQKS-YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILF 120
+ ++ + L+ Y+ G A V V+ V L +I G+++ ++V F
Sbjct: 196 LEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAF 255
Query: 121 NQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMA 180
M + +PN TY+ +L C + G+ +HG ++ +G+
Sbjct: 256 QSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF----------------- 298
Query: 181 GADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIA 240
E + S+L +Y+RC V+ + R+F + N V+WT++I+
Sbjct: 299 -----------------ESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLIS 341
Query: 241 GYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYI------E 294
G +NG+ ALI F KM R + + +L +AL C+ L GR IH +
Sbjct: 342 GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR 401
Query: 295 EKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYAN 354
+K +G + LI +Y CG + A VF + + IS TMI ++A+ G+
Sbjct: 402 DKYAG----------SGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGR 451
Query: 355 EALAIFELMQSLG 367
EAL +FE M +LG
Sbjct: 452 EALDLFERMINLG 464
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 45/268 (16%)
Query: 13 SYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYIL 69
++Q +L E + N T + +L SC LK + IH +V GF
Sbjct: 254 AFQSMLVEKVQPNEYTYASVLI--------SCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
LL+ Y+ + + +VFK ++ P+ W +I G ++ ++I F +M +
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
PN T S L GC+ + EG Q+HG V G+ + + + LI+LYG G + A
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS---DMA 422
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
+ VFD + E +++ N TMI YA+NG R
Sbjct: 423 RLVFDTLSEVDVISLN-------------------------------TMIYSYAQNGFGR 451
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSAC 277
+AL LF +M + + V++++ L AC
Sbjct: 452 EALDLFERMINLGLQPNDVTVLSVLLAC 479
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 152/346 (43%), Gaps = 47/346 (13%)
Query: 22 IPANTITTSRILQQHLFHLLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIA 78
I +T+TT+ Q LL+ C +++ + I ++ GF + +KL+ +
Sbjct: 57 ITCDTLTTTHNFSQ----LLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLK 111
Query: 79 SGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFL 138
G + A +VF + + WN +I + +++V ++ M P+ T S +
Sbjct: 112 CGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSV 171
Query: 139 LSGCARSGLLREGEQVHGRVLVNGY-YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
+ L +E ++ HG ++ G NVF+ + L+++
Sbjct: 172 FKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDM--------------------- 210
Query: 198 ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK 257
Y++ G A+ + D++ E++VV T +I GY++ G+ +A+ F
Sbjct: 211 -------------YVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 258 MRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYA 317
M V ++ + + L +C L D+ G+ IH + + SG +L + +L+ MY
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK--SGFESAL--ASQTSLLTMYL 313
Query: 318 SCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
C +++++ VF+ + + +SWT++I + G AL F M
Sbjct: 314 RCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 27/257 (10%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILA 70
++ ++ + I N+ T S L+ C L QIH + +GF + Y +
Sbjct: 356 FRKMMRDSIKPNSFTLS--------SALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGS 407
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
L+ Y G A VF + V N MI +A++ R+++ LF +M +P
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN-----LINLYGMAGADFG 185
N +T +L C S L+ EG + L + + + M TN +++L G AG
Sbjct: 468 NDVTVLSVLLACNNSRLVEEGCE-----LFDSFRKDKIMLTNDHYACMVDLLGRAGR--- 519
Query: 186 VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAG---Y 242
+E A+ + E+ ++V W ++L+ VE A RI K++E T+I Y
Sbjct: 520 LEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLY 579
Query: 243 ARNGKCRQALILFNKMR 259
A GK + + + +KM+
Sbjct: 580 ASTGKWNRVIEMKSKMK 596
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 23/177 (12%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
+ ++ ++CG+++ AR++FD M ER++VTW ++IA ++ + ++A+ ++ M +V
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL---------NNALIHM 315
D+ +L + A DL L EK + +S L + L +AL+ M
Sbjct: 163 PDEYTLSSVFKA---FSDLSL---------EKEAQRSHGLAVILGLEVSNVFVGSALVDM 210
Query: 316 YASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFE--LMQSLGANE 370
Y G EA V + ++ + T +I ++++G EA+ F+ L++ + NE
Sbjct: 211 YVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNE 267
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 149/338 (44%), Gaps = 47/338 (13%)
Query: 37 LFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L L SC +LK+ QIH + + G + L++ Y +G+L K+F +
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 94 NPSVTLWNQMIRGHARSES--PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
WN +I ARSE P V N RA + + N +T+S +LS + G
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGELG 536
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+Q+HG L N + DE N +++A Y
Sbjct: 537 KQIHGLALKN-----------------------------NIADEATTEN-----ALIACY 562
Query: 212 MRCGNVEGARRIFDKMMER-NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSL 270
+CG ++G +IF +M ER + VTW +MI+GY N +AL L M + LD
Sbjct: 563 GKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMY 622
Query: 271 VAALSACAELGDLRLGRWIHT-YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
LSA A + L G +H + L + + +AL+ MY+ CG ++ A F
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESD-----VVVGSALVDMYSKCGRLDYALRFF 677
Query: 330 RWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
MP R++ SW +MI +A+ G EAL +FE M+ G
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 145/313 (46%), Gaps = 53/313 (16%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRG 106
++ L QI I G ++ + L+S + SG L A KVF +++ + N ++ G
Sbjct: 224 VRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVG 283
Query: 107 HARSESPRKSVILFNQMRAA-EAEPNLLTYSFLLSGCARSGL-----LREGEQVHGRVLV 160
R + ++ LF M + + P +Y LLS L L++G +VHG V+
Sbjct: 284 LVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 161 NGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGA 220
G DF V N ++ +Y +CG++ A
Sbjct: 342 TGL------------------VDFMVGIG---------------NGLVNMYAKCGSIADA 368
Query: 221 RRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAEL 280
RR+F M +++ V+W +MI G +NG +A+ + MRR + +L+++LS+CA L
Sbjct: 369 RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Query: 281 GDLRLGRWIHTYIEEKLSGKSQSLLISLN----NALIHMYASCGVIEEAYEVFRWMPKRS 336
+LG+ IH G+S L I LN NAL+ +YA G + E ++F MP+
Sbjct: 429 KWAKLGQQIH--------GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 480
Query: 337 NISWTTMICAFAK 349
+SW ++I A A+
Sbjct: 481 QVSWNSIIGALAR 493
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 103/184 (55%), Gaps = 7/184 (3%)
Query: 188 YAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
+ R++ ++++ N+++ Y+ G+ AR++FD+M RN V+W +++GY+RNG+
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRL--GRWIHTYIEEKLSGKSQSLL 305
++AL+ M + + +Q + V+ L AC E+G + + GR IH + KLS ++
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLM-FKLSYAVDAV- 140
Query: 306 ISLNNALIHMYASC-GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
++N LI MY C G + A F + ++++SW ++I +++ G A IF MQ
Sbjct: 141 --VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 365 SLGA 368
G+
Sbjct: 199 YDGS 202
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 169/406 (41%), Gaps = 88/406 (21%)
Query: 40 LLQSCKTLKYLSQI-HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVT 98
+QSC + ++ H+++ + + Y+ L++ Y+ +G +SA KVF E+ +
Sbjct: 9 FVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCV 68
Query: 99 LWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGL--LREGEQVHG 156
W ++ G++R+ +++++ M N + +L C G + G Q+HG
Sbjct: 69 SWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHG 128
Query: 157 --------------RVLVNGYYP------------------NVFMKTNLINLYGMAGADF 184
VL++ Y+ N ++I++Y AG
Sbjct: 129 LMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ- 187
Query: 185 GVEYAQRVFDEM---GER-------------------------NIVC------------- 203
A R+F M G R I+C
Sbjct: 188 --RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 204 WNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
+ +++ + + G++ AR++F++M RN VT ++ G R +A LF M + +
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMI 304
Query: 264 DLDQVSLVAALSA-----CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYAS 318
D+ S V LS+ AE L+ GR +H ++ ++ ++ + N L++MYA
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHV---ITTGLVDFMVGIGNGLVNMYAK 361
Query: 319 CGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
CG I +A VF +M + ++SW +MI + G EA+ ++ M+
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 140/325 (43%), Gaps = 43/325 (13%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAK-LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIR 105
LK ++H ++ G + L++ Y G + A +VF + + WN MI
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP 165
G ++ ++V + MR + P T LS CA + G+Q+HG L G
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG--- 445
Query: 166 NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFD 225
I+L N+ N+++ +Y G + R+IF
Sbjct: 446 --------IDL-----------------------NVSVSNALMTLYAETGYLNECRKIFS 474
Query: 226 KMMERNVVTWTTMIAGYARNGKC-RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLR 284
M E + V+W ++I AR+ + +A++ F +RA L++++ + LSA + L
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE 534
Query: 285 LGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF-RWMPKRSNISWTT 342
LG+ IH ++ ++ ++ + NALI Y CG ++ ++F R +R N++W +
Sbjct: 535 LGKQIHGLALKNNIADEATT-----ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589
Query: 343 MICAFAKQGYANEALAIFELMQSLG 367
MI + +AL + M G
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTG 614
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV--KNPSVTLWNQMIRGHAR 109
QIH + + + ++ L++ Y G + K+F + + +VT WN MI G+
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT-WNSMISGYIH 596
Query: 110 SESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFM 169
+E K++ L M + Y+ +LS A L G +VH +
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA----------CSV 646
Query: 170 KTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
+ L E ++V ++++ +Y +CG ++ A R F+ M
Sbjct: 647 RACL------------------------ESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 230 RNVVTWTTMIAGYARNGKCRQALILFNKMR-RAHVDLDQVSLVAALSACAELGDLRLGRW 288
RN +W +MI+GYAR+G+ +AL LF M+ D V+ V LSAC+ G L G
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG-- 740
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI-SWTTMICA 346
+ E + I + + + G +++ + MP + N+ W T++ A
Sbjct: 741 -FKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 152/339 (44%), Gaps = 48/339 (14%)
Query: 37 LFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYI---ASGHLLSAHKVFK 90
L + +C L+ LS Q+H+ + G + L+ Y A G + KVF
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 91 EVKNPSVTLWNQMIRGHARSES-PRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLL 148
+++ SV W +I G+ ++ + +++ LF++M EPN T+S C
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 149 REGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
R G+QV G+ G N + NS++
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVA----------------------------------NSVI 415
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
+++++ +E A+R F+ + E+N+V++ T + G RN QA L +++ + +
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ + LS A +G +R G IH+ + + +Q + NALI MY+ CG I+ A V
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC----NALISMYSKCGSIDTASRV 531
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
F +M R+ ISWT+MI FAK G+A L F M G
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 154/334 (46%), Gaps = 44/334 (13%)
Query: 17 LLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFY 76
L E+I + + F + + Q+ Q G + S + ++S +
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF 418
Query: 77 IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
+ S + A + F+ + ++ +N + G R+ + ++ L +++ E + T++
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFA 478
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
LLSG A G +R+GEQ+H +V+ G N
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQVVKLGLSCN------------------------------ 508
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
VC N+++++Y +CG+++ A R+F+ M RNV++WT+MI G+A++G + L FN
Sbjct: 509 ---QPVC-NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH---TYIEEKLSGKSQSLLISLNNALI 313
+M V ++V+ VA LSAC+ +G + G W H Y + K+ K + ++
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEG-WRHFNSMYEDHKIKPKMEHYA-----CMV 618
Query: 314 HMYASCGVIEEAYEVFRWMPKRSNI-SWTTMICA 346
+ G++ +A+E MP ++++ W T + A
Sbjct: 619 DLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 157/363 (43%), Gaps = 58/363 (15%)
Query: 16 MLLEELIPANTITTSRILQQHLFHLLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKL 72
M + + P +++T S LL+SC + + +H +++ S + L
Sbjct: 52 MARDGIRPMDSVTFS--------SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSL 103
Query: 73 LSFYIASGHLLSAHKVFKEVK---NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
+S Y SG A VF+ ++ V W+ M+ + + ++ +F +
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY-PNVFMKTNLINLYGMAGADFGVEY 188
PN Y+ ++ C+ S + G G ++ G++ +V + +LI+++ F
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF---- 219
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
E A ++FDKM E NVVTWT MI + G
Sbjct: 220 -----------------------------ENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
R+A+ F M + + D+ +L + SACAEL +L LG+ +H++ L+ +
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW------AIRSGLVDDV 304
Query: 309 NNALIHMYASC---GVIEEAYEVFRWMPKRSNISWTTMICAFAKQ-GYANEALAIFELMQ 364
+L+ MYA C G +++ +VF M S +SWT +I + K A EA+ +F M
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 365 SLG 367
+ G
Sbjct: 365 TQG 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 40/272 (14%)
Query: 95 PSVT----LWNQMIRGHARSESPRKSVILFNQMRAAEAEP-NLLTYSFLLSGCARSGLLR 149
PSV+ + +++I H + R +V + M P + +T+S LL C R+ R
Sbjct: 20 PSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFR 79
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLA 209
G+ VH R++ P+ + +LI+LY +G E G+R++V W++M+A
Sbjct: 80 LGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMA 139
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
Y G A ++F + +E G N C A+I RA + D V
Sbjct: 140 CYGNNGRELDAIKVFVEFLE----------LGLVPNDYCYTAVI------RACSNSDFVG 183
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASC-GVIEEAYEV 328
+G + LG + T G +S + + +LI M+ E AY+V
Sbjct: 184 ----------VGRVTLGFLMKT-------GHFES-DVCVGCSLIDMFVKGENSFENAYKV 225
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
F M + + ++WT MI + G+ EA+ F
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 8 VHFQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSY 67
++F+ ++++L E I + S L + + +++ QIH+Q+V G S
Sbjct: 453 LNFEQAFKLLSE--ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 68 ILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
+ L+S Y G + +A +VF ++N +V W MI G A+ + + FNQM
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 128 AEPNLLTYSFLLSGCARSGLLREG 151
+PN +TY +LS C+ GL+ EG
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEG 594
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 246 GKCRQALILFNKMRRAHV-DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSL 304
G R A+ + M R + +D V+ + L +C D RLG+ +H + E + S+
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIE-FDIEPDSV 98
Query: 305 LISLNNALIHMYASCG---VIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFE 361
L N+LI +Y+ G E+ +E R KR +SW+ M+ + G +A+ +F
Sbjct: 99 LY---NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 362 LMQSLG 367
LG
Sbjct: 156 EFLELG 161
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 120/235 (51%), Gaps = 36/235 (15%)
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
P+ LT+ FL+ C ++ G+Q+H V+ NG VF+ + +
Sbjct: 11 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNG----VFLSDSHVQ-------------- 52
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
+L +Y+ + AR++FD++ + +VV W ++ GY R G
Sbjct: 53 ---------------TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGS 97
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
+ L +F +M ++ D+ S+ AL+ACA++G L G+WIH ++++K +S + +
Sbjct: 98 EGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESD---VFVG 154
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
AL+ MYA CG IE A EVF+ + +R+ SW +I +A GYA +A+ E ++
Sbjct: 155 TALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 209
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 140/317 (44%), Gaps = 49/317 (15%)
Query: 38 FH-LLQSCKTLKYLS---QIHTQIVIHG-FSQKSYILAKLLSFYIASGHLLSAHKVFKEV 92
FH L+ +C + S QIH +V +G F S++ +L Y+ LL A KVF E+
Sbjct: 16 FHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEI 75
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
P V W+ ++ G+ R + + +F +M EP+ + + L+ CA+ G L +G+
Sbjct: 76 PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGK 135
Query: 153 QVHGRVLVNGYY-PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+H V + +VF+ T L+++Y G +E A VF ++ RN
Sbjct: 136 WIHEFVKKKSWIESDVFVGTALVDMYAKCGC---IETAVEVFKKLTRRN----------- 181
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAH-VDLDQVSL 270
V +W +I GYA G ++A+ ++ R + D V L
Sbjct: 182 --------------------VFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVL 221
Query: 271 VAALSACAELGDLRLGRWIHTYIEEK--LSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ L+ACA G L GR + +E + ++ K + + ++ + G +++A +
Sbjct: 222 LGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY-----SCIVDLMCRAGRLDDALNL 276
Query: 329 FRWMPKRSNIS-WTTMI 344
MP + S W ++
Sbjct: 277 IEKMPMKPLASVWGALL 293
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 147/324 (45%), Gaps = 39/324 (12%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN-PSVTLWNQMIR 105
L + ++H GF Y+ + L++ Y + A KVF E+ + LWN ++
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP 165
G+++ ++++F++MR + T + +LS SG + G +HG + G
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGS 295
Query: 166 NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFD 225
++ + LI++YG + +E A +F+ M ER++ WNS+L V+ CG+ +G +F+
Sbjct: 296 DIVVSNALIDMYGKSKW---LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFE 352
Query: 226 KMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRL 285
+M+ C + + D V+L L C L LR
Sbjct: 353 RML-------------------C------------SGIRPDIVTLTTVLPTCGRLASLRQ 381
Query: 286 GRWIHTY--IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTM 343
GR IH Y + L+ KS + I +N+L+ MY CG + +A VF M + + SW M
Sbjct: 382 GREIHGYMIVSGLLNRKSSNEFI--HNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIM 439
Query: 344 ICAFAKQGYANEALAIFELMQSLG 367
I + Q AL +F M G
Sbjct: 440 INGYGVQSCGELALDMFSCMCRAG 463
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 153/332 (46%), Gaps = 45/332 (13%)
Query: 41 LQSCKTLK-YLS--QIHTQIVIHGFSQKSYILA-KLLSFYIASGHLLSAHKVFKEVKNPS 96
LQ C K Y+S QIH +V GF S L++ Y G + A VF +
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSER-D 125
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V +N +I G + SP ++ + +MRA P+ T+ LL G + + L + ++VHG
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHG 184
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
G+ + ++ + L+ Y + +M +
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSY-------------------------------SKFM---S 210
Query: 217 VEGARRIFDKMMERN-VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
VE A+++FD++ +R+ V W ++ GY++ + AL++F+KMR V + + ++ + LS
Sbjct: 211 VEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLS 270
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
A GD+ GR IH + SG I ++NALI MY +EEA +F M +R
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSD----IVVSNALIDMYGKSKWLEEANSIFEAMDER 326
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+W +++C G + LA+FE M G
Sbjct: 327 DLFTWNSVLCVHDYCGDHDGTLALFERMLCSG 358
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 137/317 (43%), Gaps = 38/317 (11%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH V G + L+ Y S L A+ +F+ + + WN ++ H
Sbjct: 284 IHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGD 343
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
++ LF +M + P+++T + +L C R LR+G ++HG ++V+G
Sbjct: 344 HDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSG---------- 393
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
L+N N NS++ +Y++CG++ AR +FD M ++
Sbjct: 394 LLN--------------------RKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDS 433
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
+W MI GY AL +F+ M RA V D+++ V L AC+ G L GR
Sbjct: 434 ASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQ 493
Query: 293 IEEKLSGKSQSLLISLNN--ALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAFAK 349
+E ++L + ++ +I M +EEAYE+ P N + W +++ +
Sbjct: 494 ME-----TVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRL 548
Query: 350 QGYANEALAIFELMQSL 366
G + AL + + L
Sbjct: 549 HGNKDLALVAGKRLHEL 565
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 153/336 (45%), Gaps = 44/336 (13%)
Query: 41 LQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
+++C +L + Q H Q + G+ ++ + L+ Y G L A KVF E+ ++
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY------SFLLSGCARSGLLREG 151
W MIRG+ + + +V LF + E + + + ++S C+R
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
E +H V+ G+ V + L++ Y G + GV A+++FD++ +++ V +NS+++VY
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYA-KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
+ G A +F ++++ VVT+ + ++L
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTF------------------------------NAITLS 291
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
L A + G LR+G+ IH + G +++ ++I MY CG +E A + F
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRM--GLEDDVIV--GTSIIDMYCKCGRVETARKAFDR 347
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
M ++ SWT MI + G+A +AL +F M G
Sbjct: 348 MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 46/277 (16%)
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
V V WN +I ARS ++++ F+ MR P ++ + C+ + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+Q H + V GY ++F+ + LI +Y
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYST-------------------------------- 123
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD------L 265
CG +E AR++FD++ +RN+V+WT+MI GY NG A+ LF + D L
Sbjct: 124 --CGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFL 181
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV--IE 323
D + LV+ +SAC+ + L IH+++ ++ + +S+ N L+ YA G +
Sbjct: 182 DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG----VSVGNTLLDAYAKGGEGGVA 237
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
A ++F + + +S+ +++ +A+ G +NEA +F
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 45/301 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGH--LLSAHKVFKEVKNPSVTLWNQMIRGHAR 109
IH+ ++ GF + + LL Y G + A K+F ++ + +N ++ +A+
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 110 SESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF 168
S ++ +F ++ + N +T S +L + SG LR G+ +H +V+ G +V
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
+ T++I++ Y +CG VE AR+ FD+M
Sbjct: 324 VGTSIIDM----------------------------------YCKCGRVETARKAFDRMK 349
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG-R 287
+NV +WT MIAGY +G +AL LF M + V + ++ V+ L+AC+ G G R
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 288 WIHTYIEEKLSGK-SQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMIC 345
W + + G+ + ++ + G +++AY++ + M K +I W++++
Sbjct: 410 WFNA-----MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
Query: 346 A 346
A
Sbjct: 465 A 465
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 87/140 (62%), Gaps = 5/140 (3%)
Query: 223 IFDKMMER-NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
+F++ +++ +V +W ++IA AR+G +AL+ F+ MR+ + + S A+ AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 282 DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWT 341
D+ G+ H + + G + +S +ALI MY++CG +E+A +VF +PKR+ +SWT
Sbjct: 91 DIFSGKQTHQ--QAFVFGYQSDIFVS--SALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 342 TMICAFAKQGYANEALAIFE 361
+MI + G A +A+++F+
Sbjct: 147 SMIRGYDLNGNALDAVSLFK 166
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 10 FQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYIL 69
F+ +++ +++ N IT S +L + L+ IH Q++ G +
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLA-----VSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
++ Y G + +A K F +KN +V W MI G+ K++ LF M +
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385
Query: 130 PNLLTYSFLLSGCARSGLLREG----EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG 185
PN +T+ +L+ C+ +GL EG + GR G P + +++L G AG
Sbjct: 386 PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF---GVEPGLEHYGCMVDLLGRAG---- 438
Query: 186 VEYAQRVFD-----EMGERNIVCWNSMLAVYMRCGNVE 218
+ Q+ +D +M +I+ W+S+LA NVE
Sbjct: 439 --FLQKAYDLIQRMKMKPDSII-WSSLLAACRIHKNVE 473
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 152/325 (46%), Gaps = 41/325 (12%)
Query: 40 LLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP- 95
LL++C L+ + S++H+ +V G+ +I+ L+S Y + L +A ++F +
Sbjct: 151 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 210
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
LWN ++ ++ S +++ LF +M PN T L+ C + G+++H
Sbjct: 211 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 270
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
VL + T+ LY VC N+++A+Y RCG
Sbjct: 271 ASVLKSS--------THSSELY------------------------VC-NALIAMYTRCG 297
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
+ A RI +M +VVTW ++I GY +N ++AL F+ M A D+VS+ + ++
Sbjct: 298 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 357
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
A L +L G +H Y+ + G +L + N LI MY+ C + F M +
Sbjct: 358 ASGRLSNLLAGMELHAYVIKH--GWDSNLQV--GNTLIDMYSKCNLTCYMGRAFLRMHDK 413
Query: 336 SNISWTTMICAFAKQGYANEALAIF 360
ISWTT+I +A+ EAL +F
Sbjct: 414 DLISWTTVIAGYAQNDCHVEALELF 438
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 158/332 (47%), Gaps = 45/332 (13%)
Query: 41 LQSCKTLKYLS---QIHTQIVIHG-FSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L +C Y +IH ++ S + Y+ L++ Y G + A ++ +++ N
Sbjct: 254 LTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNAD 313
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V WN +I+G+ ++ ++++ F+ M AA + + ++ + +++ R L G ++H
Sbjct: 314 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHA 373
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
V+ +G+ N+ + LI++Y N+ C+
Sbjct: 374 YVIKHGWDSNLQVGNTLIDMYSKC-------------------NLTCYMG---------- 404
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
R F +M ++++++WTT+IAGYA+N +AL LF + + +++D++ L + L A
Sbjct: 405 -----RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 459
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLIS-LNNALIHMYASCGVIEEAYEVFRWMPKR 335
+ L + + + IH +I K LL + + N L+ +Y C + A VF + +
Sbjct: 460 SSVLKSMLIVKEIHCHILRK------GLLDTVIQNELVDVYGKCRNMGYATRVFESIKGK 513
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+SWT+MI + A G +EA+ +F M G
Sbjct: 514 DVVSWTSMISSSALNGNESEAVELFRRMVETG 545
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 83 LSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGC 142
+S KVF E+ + + WN MI + + P ++ L+ MR L ++ LL C
Sbjct: 96 VSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC 155
Query: 143 ARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER-NI 201
A+ +R G ++H ++ GY+ F+ L+++Y + + A+R+FD E+ +
Sbjct: 156 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY---AKNDDLSAARRLFDGFQEKGDA 212
Query: 202 VCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA 261
V WNS+L + Y+ +GK + L LF +M
Sbjct: 213 VLWNSIL-------------------------------SSYSTSGKSLETLELFREMHMT 241
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV 321
+ ++V+AL+AC +LG+ IH + L + S + + NALI MY CG
Sbjct: 242 GPAPNSYTIVSALTACDGFSYAKLGKEIHASV---LKSSTHSSELYVCNALIAMYTRCGK 298
Query: 322 IEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ +A + R M ++W ++I + + EAL F M + G
Sbjct: 299 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 344
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 39/313 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
++H ++ HG+ + L+ Y + F + + + W +I G+A+++
Sbjct: 370 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 429
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+++ LF + E + + +L + + +++H +L G V
Sbjct: 430 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQ-- 487
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
N ++ VY +C N+ A R+F+ + ++
Sbjct: 488 ---------------------------------NELVDVYGKCRNMGYATRVFESIKGKD 514
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VV+WT+MI+ A NG +A+ LF +M + D V+L+ LSA A L L GR IH
Sbjct: 515 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 574
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
Y L K L S+ A++ MYA CG ++ A VF + ++ + +T+MI A+ G
Sbjct: 575 Y----LLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHG 630
Query: 352 YANEALAIFELMQ 364
A+ +F+ M+
Sbjct: 631 CGKAAVELFDKMR 643
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLS 74
+M ++E+I + + S +L K++ + +IH I+ G + I +L+
Sbjct: 445 RMEIDEMILGSILRASSVL-----------KSMLIVKEIHCHILRKGL-LDTVIQNELVD 492
Query: 75 FYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
Y ++ A +VF+ +K V W MI A + + ++V LF +M + +
Sbjct: 493 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 552
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
+LS A L +G ++H +L G+ + ++++Y
Sbjct: 553 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC--------------- 597
Query: 195 EMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALIL 254
CG+++ A+ +FD++ + ++ +T+MI Y +G + A+ L
Sbjct: 598 -------------------CGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 638
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
F+KMR +V D +S +A L AC+ G L GR
Sbjct: 639 FDKMRHENVSPDHISFLALLYACSHAGLLDEGR 671
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 159/335 (47%), Gaps = 43/335 (12%)
Query: 40 LLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L+++C K+++ + +++ ++ +GF + Y++ ++L ++ G ++ A ++F E+ +
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN 188
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ + +I G + ++ LF M ++ T++ +L A G + G+Q+H
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV 248
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
L G N F+ LI++Y +CG+
Sbjct: 249 CALKLGVVDNTFVSCGLIDMYS----------------------------------KCGD 274
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+E AR F+ M E+ V W +IAGYA +G +AL L MR + V +DQ +L +
Sbjct: 275 IEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRI 334
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
+L L L + H + + +S +++ N AL+ Y+ G ++ A VF +P+++
Sbjct: 335 STKLAKLELTKQAHASL---IRNGFESEIVA-NTALVDFYSKWGRVDTARYVFDKLPRKN 390
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLGANEA 371
ISW ++ +A G +A+ +FE M + AN A
Sbjct: 391 IISWNALMGGYANHGRGTDAVKLFEKM--IAANVA 423
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 38/236 (16%)
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
TY L+ C R +R ++V+G ++ NG+ P +M
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYM------------------------ 160
Query: 194 DEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
N +L ++++CG + ARR+FD++ ERN+ ++ ++I+G+ G +A
Sbjct: 161 ----------MNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFE 210
Query: 254 LFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALI 313
LF M D + + L A A LG + +G+ +H KL G + +S LI
Sbjct: 211 LFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV-CALKL-GVVDNTFVSC--GLI 266
Query: 314 HMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
MY+ CG IE+A F MP+++ ++W +I +A GY+ EAL + M+ G +
Sbjct: 267 DMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVS 322
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 141/334 (42%), Gaps = 43/334 (12%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
++M+ EEL T T + +L+ ++ Q+H + G +++ L+
Sbjct: 212 FKMMWEELSDCETHTFAVMLRAS-----AGLGSIYVGKQLHVCALKLGVVDNTFVSCGLI 266
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y G + A F+ + + WN +I G+A +++ L MR + +
Sbjct: 267 DMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQF 326
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
T S ++ + L +Q H ++ NG+ + T L++ Y
Sbjct: 327 TLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYS--------------- 371
Query: 194 DEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
+ G V+ AR +FDK+ +N+++W ++ GYA +G+ A+
Sbjct: 372 -------------------KWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVK 412
Query: 254 LFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALI 313
LF KM A+V + V+ +A LSACA G G I + E K +++ + +I
Sbjct: 413 LFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYA---CMI 469
Query: 314 HMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICA 346
+ G+++EA R P ++ ++ W ++ A
Sbjct: 470 ELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 142/325 (43%), Gaps = 41/325 (12%)
Query: 45 KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMI 104
+ L + QIH ++ G + I +++ Y+ G L+ A +VF ++ ++
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 105 RGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
G+ ++ R ++ LF + E + +S +L CA L G+Q+H V G
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIF 224
V + T L++ Y ++C + E A R F
Sbjct: 318 SEVSVGTPLVDFY----------------------------------IKCSSFESACRAF 343
Query: 225 DKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD-LDQVSLVAALSACAELGDL 283
++ E N V+W+ +I+GY + + +A+ F +R + L+ + + AC+ L D
Sbjct: 344 QEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403
Query: 284 RLGRWIHT-YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTT 342
+G +H I+ L G +ALI MY+ CG +++A EVF M ++WT
Sbjct: 404 NIGGQVHADAIKRSLIGSQYG-----ESALITMYSKCGCLDDANEVFESMDNPDIVAWTA 458
Query: 343 MICAFAKQGYANEALAIFELMQSLG 367
I A G A+EAL +FE M S G
Sbjct: 459 FISGHAYYGNASEALRLFEKMVSCG 483
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 149/334 (44%), Gaps = 43/334 (12%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAK-LLSFYIASGHLLSAHKVFKEVKNP 95
L ++C+ L+ LS +H ++ + G S +L +L Y L A K+F E+
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRM-GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSEL 147
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+ MI +A K+V LF+ M A+ +P Y+ LL L G Q+H
Sbjct: 148 NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIH 207
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
V+ G N ++T ++N+Y ++CG
Sbjct: 208 AHVIRAGLCSNTSIETGIVNMY----------------------------------VKCG 233
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
+ GA+R+FD+M + V T ++ GY + G+ R AL LF + V+ D L
Sbjct: 234 WLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLK 293
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
ACA L +L LG+ IH + KL +S+ +S+ L+ Y C E A F+ + +
Sbjct: 294 ACASLEELNLGKQIHACV-AKLGLESE---VSVGTPLVDFYIKCSSFESACRAFQEIREP 349
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
+++SW+ +I + + EA+ F+ ++S A+
Sbjct: 350 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 135/310 (43%), Gaps = 42/310 (13%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L++C +L+ L+ QIH + G + + L+ FYI SA + F+E++ P+
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP-NLLTYSFLLSGCARSGLLREGEQVH 155
W+ +I G+ + ++V F +R+ A N TY+ + C+ G QVH
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
+ + + ++ LI +Y G ++ A VF+ M +IV W + ++ + G
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGC---LDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
N A R+F+KM+ G N V+ +A L+
Sbjct: 468 NASEALRLFEKMVS----------CGMKPN---------------------SVTFIAVLT 496
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
AC+ G + G+ ++ L + + I + +I +YA G+++EA + + MP
Sbjct: 497 ACSHAGLVEQGKHC---LDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFE 553
Query: 336 SN-ISWTTMI 344
+ +SW +
Sbjct: 554 PDAMSWKCFL 563
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 127/293 (43%), Gaps = 47/293 (16%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
+LS Y+ + + A F + WN MI G+AR K+ LF M E N
Sbjct: 44 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKN 99
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
++++ ++SG G L E A
Sbjct: 100 EVSWNAMISGYIECGDL--------------------------------------EKASH 121
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM-MERNVVTWTTMIAGYARNGKCRQ 250
F R +V W +M+ YM+ VE A +F M + +N+VTW MI+GY N +
Sbjct: 122 FFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPED 181
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
L LF M + + L +AL C+EL L+LGR IH + + + L S
Sbjct: 182 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS--- 238
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
LI MY CG + +A+++F M K+ ++W MI +A+ G A++AL +F M
Sbjct: 239 -LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 290
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 125/267 (46%), Gaps = 7/267 (2%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
++S YI G L A FK V W MI G+ +++ + +F M + N
Sbjct: 106 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNK---N 162
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF-MKTNLINLYGMAGADFGVEYAQ 190
L+T++ ++SG + +G ++ +L G PN + + L+ ++ G + Q
Sbjct: 163 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 222
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
V ++ S++++Y +CG + A ++F+ M +++VV W MI+GYA++G +
Sbjct: 223 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK 282
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
AL LF +M + D ++ VA L AC G + +G Y E +
Sbjct: 283 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGM---AYFESMVRDYKVEPQPDHYT 339
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSN 337
++ + G +EEA ++ R MP R +
Sbjct: 340 CMVDLLGRAGKLEEALKLIRSMPFRPH 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 52/239 (21%)
Query: 131 NLLTYSFLLSGCARS-GLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
N +T++ LL G ++ + E Q+ + P+ F +++ Y + +F E A
Sbjct: 5 NTITWNSLLIGISKDPSRMMEAHQLFDEIP----EPDTFSYNIMLSCY-VRNVNF--EKA 57
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
Q FD M ++ WN+M+ Y R G +E AR +F MME+N V+W MI+GY G
Sbjct: 58 QSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLE 117
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
+A F +V+ V + A W
Sbjct: 118 KASHFF-----------KVAPVRGVVA-----------W--------------------- 134
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAFAKQGYANEALAIFELMQSLG 367
A+I Y +E A +F+ M N ++W MI + + + L +F M G
Sbjct: 135 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 193
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 114/293 (38%), Gaps = 48/293 (16%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILA 70
++ +LEE I N+ L L C L L QIH + L
Sbjct: 186 FRAMLEEGIRPNS--------SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALT 237
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
L+S Y G L A K+F+ +K V WN MI G+A+ + K++ LF +M + P
Sbjct: 238 SLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRP 297
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY--PNVFMKTNLINLYGMAG------- 181
+ +T+ +L C +GL+ G + +V Y P T +++L G AG
Sbjct: 298 DWITFVAVLLACNHAGLVNIG-MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 356
Query: 182 -----------ADFGV--------------EYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
A FG E+A ++ +N + + +Y
Sbjct: 357 LIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNR 416
Query: 217 VEGARRIFDKMMERNVVTWTTM-IAGYARNGKCRQALILFNKMRRAHVDLDQV 268
E R+ +M E NVV + + GY+ + R + F R H +LD +
Sbjct: 417 WEDVARVRKRMKESNVVKVERVKVPGYSWI-EIRNKVHHFRSSDRIHPELDSI 468
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 175/402 (43%), Gaps = 87/402 (21%)
Query: 43 SCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQ 102
SC +++L + ++ S+ S+ ++S Y + + A +F+++ + W+
Sbjct: 114 SCGGIRFLEEAR-KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 103 MIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRV--LV 160
MI G ++ +V+LF +M ++ P L++G ++ L E V G+ LV
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLV 228
Query: 161 NGYYPNVFMKTNLINLYG-----------------MAGADFGVEYAQR------------ 191
+G V+ LI YG + G D G E+ +R
Sbjct: 229 SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMI 288
Query: 192 --------------VFDEMGERNIVCWNSML----------------------------- 208
+FD+M +R+ + WN+M+
Sbjct: 289 KAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNM 348
Query: 209 --AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
+ Y GNVE AR F+K E++ V+W ++IA Y +N ++A+ LF +M D
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+L + LSA L +LRLG +H + + + + ++NALI MY+ CG I E+
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-----VPVHNALITMYSRCGEIMESR 463
Query: 327 EVFRWMP-KRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+F M KR I+W MI +A G A+EAL +F M+S G
Sbjct: 464 RIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNG 505
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 60/310 (19%)
Query: 71 KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
K L+ I SG++ A +F++++ + WN MI G+ + ++ LF+ M +
Sbjct: 45 KELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKR 100
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+++T++ ++SG G +R F+ E A+
Sbjct: 101 DVVTWNTMISGYVSCGGIR------------------FL-----------------EEAR 125
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
++FDEM R+ WN+M++ Y + + A +F+KM ERN V+W+ MI G+ +NG+
Sbjct: 126 KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDS 185
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
A++LF KM D L A ++ + L W+ +SG+ L+ N
Sbjct: 186 AVVLFRKMPVK----DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRED--LVYAYN 239
Query: 311 ALIHMYASCGVIEEAYEVFRWMPK---------------RSNISWTTMICAFAKQGYANE 355
LI Y G +E A +F +P ++ +SW +MI A+ K G
Sbjct: 240 TLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVS 299
Query: 356 ALAIFELMQS 365
A +F+ M+
Sbjct: 300 ARLLFDQMKD 309
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 30/239 (12%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHAR-----------SESPRKSVILF 120
++ Y+ G ++SA +F ++K+ WN MI G+ SE P + +
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSW 346
Query: 121 NQMRAAEA----------------EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
N M + A E + ++++ +++ ++ +E + R+ + G
Sbjct: 347 NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 165 PNVFMKTNLINL-YGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRI 223
P+ T+L++ G+ G++ Q V + ++ N+++ +Y RCG + +RRI
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRI 465
Query: 224 FDKM-MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
FD+M ++R V+TW MI GYA +G +AL LF M+ + ++ V+ L+ACA G
Sbjct: 466 FDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
N L +R G + AR IF+K+ RN VTW TMI+GY + + QA LF+ M +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR--- 100
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
D V+ +S G +R +E S S S N +I YA I E
Sbjct: 101 -DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSW-----NTMISGYAKNRRIGE 154
Query: 325 AYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
A +F MP+R+ +SW+ MI F + G + A+ +F M
Sbjct: 155 ALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 152/335 (45%), Gaps = 46/335 (13%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L C LS +H V GF + ++SFY G L A + F E+
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V +N +I G + P +S LF++MR + P++ T +L+ C+ L G HG
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+V+GY N + L+++Y G ++ A+RVFD M +R+IV WN
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGK---LDVAKRVFDTMHKRDIVSWN----------- 479
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
TM+ G+ +G ++AL LFN M+ V+ D+V+L+A LSA
Sbjct: 480 --------------------TMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN--NALIHMYASCGVIEEAYEVFRWMPK 334
C+ G + G+ + +S +++ ++ N + + A G ++EAY+ MP
Sbjct: 520 CSHSGLVDEGKQLF----NSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPF 575
Query: 335 RSNISWTTMICAFAKQGYANEALA--IFELMQSLG 367
+I + + A Y N L + + MQSLG
Sbjct: 576 EPDIRVLGTLLS-ACWTYKNAELGNEVSKKMQSLG 609
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 42/336 (12%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK-EVKNP 95
+F L L+ +H GFS + +L Y S ++ A +VF + K
Sbjct: 211 MFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAE--AEPNLLTYSFLLSGCARSGLLREGEQ 153
VT W+ MI G+ +E +++ +F QM + A + +L GCAR G L G
Sbjct: 271 EVT-WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRC 329
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
VH + G+ ++ ++ N++++ Y +
Sbjct: 330 VHCYAVKAGFILDLTVQ----------------------------------NTIISFYAK 355
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
G++ A R F ++ ++V+++ ++I G N + ++ LF++MR + + D +L+
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGV 415
Query: 274 LSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
L+AC+ L L G H Y ++ S+ NAL+ MY CG ++ A VF M
Sbjct: 416 LTACSHLAALGHGSSCHGYCVVH----GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH 471
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
KR +SW TM+ F G EAL++F MQ G N
Sbjct: 472 KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVN 507
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 148/347 (42%), Gaps = 60/347 (17%)
Query: 17 LLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFY 76
LLE I + + +++ QHL L+ TL S +L L Y
Sbjct: 5 LLETCIRSRNLVLGQVIHQHL---LKRSLTL----------------SSSTVLVNLTRLY 45
Query: 77 IASGHLLSAHKVFKEVKNPSVT--LWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
+ + A VF E+ +P + W+ MIR +A ++ K++ L+ +M + P T
Sbjct: 46 ASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYT 105
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
Y F+L CA + +G+ +H V + + ++++ T L++ Y G +E A +VFD
Sbjct: 106 YPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGE---LEMAIKVFD 162
Query: 195 EMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALIL 254
EM +R++V WN+ MI+G++ + + L
Sbjct: 163 EMPKRDMVAWNA-------------------------------MISGFSLHCCLTDVIGL 191
Query: 255 FNKMRRAH-VDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALI 313
F MRR + + ++V A G LR G+ +H Y G S L++ ++
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM--GFSNDLVV--KTGIL 247
Query: 314 HMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
+YA I A VF K++ ++W+ MI + + EA +F
Sbjct: 248 DVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 37 LFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +L +C L L S H V+HG++ + I L+ Y G L A +VF +
Sbjct: 412 LLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH 471
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+ WN M+ G ++++ LFN M+ P+ +T +LS C+ SGL+ EG+Q
Sbjct: 472 KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQ 531
Query: 154 V 154
+
Sbjct: 532 L 532
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 23/302 (7%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
++S Y ++G A ++F E+ +V WN ++ G+ ++ ++ +F M E N
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELM----PERN 109
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+++++ ++ G + G++ E E + R+ M LI+ D ++ A++
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID-------DGRIDKARK 162
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQA 251
++D M +++V +M+ R G V+ AR IFD+M ERNVVTWTTMI GY +N + A
Sbjct: 163 LYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVA 222
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
LF M ++ S++ + + D EE +I+ N A
Sbjct: 223 RKLFEVMPE-KTEVSWTSMLLGYTLSGRIED----------AEEFFEVMPMKPVIACN-A 270
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEA 371
+I + G I +A VF M R N +W MI A+ ++G+ EAL +F MQ G +
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 372 KP 373
P
Sbjct: 331 FP 332
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 140/294 (47%), Gaps = 19/294 (6%)
Query: 77 IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
I G + A K++ + V MI G R ++ ++F++MR E N++T++
Sbjct: 152 IDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR----ERNVVTWT 207
Query: 137 FLLSGCARSGLLREGEQVH-GRVLVNGYYPNVFMK-TNLINLYGMAGADFGVEYAQRVFD 194
+++G R+ +V R L + T+++ Y ++G +E A+ F+
Sbjct: 208 TMITG------YRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGR---IEDAEEFFE 258
Query: 195 EMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALIL 254
M + ++ N+M+ + G + ARR+FD M +R+ TW MI Y R G +AL L
Sbjct: 259 VMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDL 318
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
F +M++ V SL++ LS CA L L+ GR +H ++ + + + L+
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD----VYVASVLMT 374
Query: 315 MYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
MY CG + +A VF + I W ++I +A G EAL IF M S G
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 137/308 (44%), Gaps = 52/308 (16%)
Query: 80 GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
G + A +VF +++ W MI+ + R +++ LF QM+ P+ + +L
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
S CA L+ G QVH ++ + +V++ + L+ +Y
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMY---------------------- 376
Query: 200 NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR 259
++CG + A+ +FD+ ++++ W ++I+GYA +G +AL +F++M
Sbjct: 377 ------------VKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 260 RAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASC 319
+ ++V+L+A L+AC+ G L G I +E K + + + + M
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKF---CVTPTVEHYSCTVDMLGRA 481
Query: 320 GVIEEAYEVFRWMPKRSNIS-WTTMICAF------------AKQGYANEA--LAIFELMQ 364
G +++A E+ M + + + W ++ A AK+ + NE + L+
Sbjct: 482 GQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLS 541
Query: 365 SLGANEAK 372
S+ A+ +K
Sbjct: 542 SINASRSK 549
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 37 LFHLLQSCKTL---KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +L C TL +Y Q+H +V F Y+ + L++ Y+ G L+ A VF
Sbjct: 334 LISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS 393
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG-- 151
+ + +WN +I G+A +++ +F++M ++ PN +T +L+ C+ +G L EG
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLE 453
Query: 152 --EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSML 208
E + + V P V + +++ G AG V+ A + + M + + W ++L
Sbjct: 454 IFESMESKFCVT---PTVEHYSCTVDMLGRAGQ---VDKAMELIESMTIKPDATVWGALL 507
Query: 209 A 209
Sbjct: 508 G 508
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 38/279 (13%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P LWN ++R + R ESP ++ ++ M + P+ + ++ + G+++
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRC 214
H + G+ + F ++ I LY +
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLY----------------------------------CKA 165
Query: 215 GNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
G E AR++FD+ ER + +W +I G G+ +A+ +F M+R+ ++ D ++V+
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVT 225
Query: 275 SACAELGDLRLGRWIHTYI-EEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
++C LGDL L +H + + K KS +++ N+LI MY CG ++ A +F M
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML---NSLIDMYGKCGRMDLASHIFEEMR 282
Query: 334 KRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
+R+ +SW++MI +A G EAL F M+ G K
Sbjct: 283 QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 136/301 (45%), Gaps = 36/301 (11%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
++H+ V GF + + ++ Y +G +A KVF E + WN +I G +
Sbjct: 138 ELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAG 197
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++V +F M+ + EP+ T + + C G L Q+H VL
Sbjct: 198 RANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVL------------ 245
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
Q +E + +I+ NS++ +Y +CG ++ A IF++M +RN
Sbjct: 246 ------------------QAKTEE--KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN 285
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
VV+W++MI GYA NG +AL F +MR V ++++ V LSAC G + G+ T
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK---T 342
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI-SWTTMICAFAKQ 350
Y S +S ++ + + G ++EA +V MP + N+ W ++ K
Sbjct: 343 YFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKF 402
Query: 351 G 351
G
Sbjct: 403 G 403
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 43 SCKTLKYLS---QIHTQIVIHGFSQKSYI--LAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
SC L LS Q+H ++ +KS I L L+ Y G + A +F+E++ +V
Sbjct: 227 SCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNV 286
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
W+ MI G+A + + +++ F QMR PN +T+ +LS C GL+ EG+
Sbjct: 287 VSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKT---- 342
Query: 158 VLVNGYYPNVFMKTNL-----INLYG----MAGADFGVEYAQRVFDEMGER-NIVCWNSM 207
Y+ MK+ ++ YG + D ++ A++V +EM + N++ W +
Sbjct: 343 -----YF--AMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL 395
Query: 208 LAVYMRCGNVEGARRIFDKMME 229
+ + G+VE A + M+E
Sbjct: 396 MGGCEKFGDVEMAEWVAPYMVE 417
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 152/314 (48%), Gaps = 38/314 (12%)
Query: 54 HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESP 113
H +I+ +L L++ Y G + A +VF + S+ WN MI + R+
Sbjct: 76 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 135
Query: 114 RKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNL 173
+++ +F +MR + + T S +LS C + E +++H + N+++ T L
Sbjct: 136 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 195
Query: 174 INLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVV 233
++LY +CG ++ A ++F+ M +++ V
Sbjct: 196 LDLYA----------------------------------KCGMIKDAVQVFESMQDKSSV 221
Query: 234 TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYI 293
TW++M+AGY +N +AL+L+ + +R ++ +Q +L + + AC+ L L G+ +H I
Sbjct: 222 TWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI 281
Query: 294 EEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYA 353
+ SG ++ ++ ++ + MYA CG + E+Y +F + +++ W T+I FAK
Sbjct: 282 CK--SGFGSNVFVA--SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 337
Query: 354 NEALAIFELMQSLG 367
E + +FE MQ G
Sbjct: 338 KEVMILFEKMQQDG 351
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 40/230 (17%)
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
+L CAR+G + E + HG+++ I+L G
Sbjct: 59 ILQLCARNGAVMEAKACHGKII-------------RIDLEG------------------- 86
Query: 198 ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK 257
++ N ++ Y +CG VE AR++FD M+ER++V+W TMI Y RN +AL +F +
Sbjct: 87 --DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 144
Query: 258 MRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQ-SLLISLNNALIHMY 316
MR + ++ + LSAC D + +H LS K+ L + + AL+ +Y
Sbjct: 145 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHC-----LSVKTCIDLNLYVGTALLDLY 199
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSL 366
A CG+I++A +VF M +S+++W++M+ + + EAL ++ Q +
Sbjct: 200 AKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM 249
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 133/279 (47%), Gaps = 38/279 (13%)
Query: 67 YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAA 126
Y+ LL Y G + A +VF+ +++ S W+ M+ G+ ++++ ++++L+ + +
Sbjct: 190 YVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM 249
Query: 127 EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
E N T S ++ C+ L EG+Q+H + +G+ NVF+ ++ +++Y
Sbjct: 250 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA-------- 301
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNG 246
+CG++ + IF ++ E+N+ W T+I+G+A++
Sbjct: 302 --------------------------KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 335
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
+ ++ +ILF KM++ + ++V+ + LS C G + GR + +
Sbjct: 336 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 395
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMI 344
S ++ + G++ EAYE+ + +P S W +++
Sbjct: 396 S---CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 431
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 33 LQQHLFHL---LQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH 86
L+Q+ F L + +C L L Q+H I GF ++ + + Y G L ++
Sbjct: 251 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 310
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
+F EV+ ++ LWN +I G A+ P++ +ILF +M+ PN +T+S LLS C +G
Sbjct: 311 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 370
Query: 147 LLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAG 181
L+ EG + + G PNV + ++++ G AG
Sbjct: 371 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 406
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 159/342 (46%), Gaps = 51/342 (14%)
Query: 33 LQQHLF-HLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKV 88
L H F +L +C L Y Q+H ++ G + L+ Y GHL+ + +V
Sbjct: 82 LSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRV 141
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLL 148
F+ V+ + WN ++ G R+ ++++ +F M E + T S ++ CA +L
Sbjct: 142 FESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKIL 201
Query: 149 REGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
++G+QVH V+V G D +V +M+
Sbjct: 202 QQGKQVHAMVVVTGR-------------------DL----------------VVLGTAMI 226
Query: 209 AVYMRCGNVEGARRIFDKM-MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
+ Y G + A ++++ + + + V ++I+G RN ++A +L ++ +R +V +
Sbjct: 227 SFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR-QRPNVRV-- 283
Query: 268 VSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
L ++L+ C++ DL +G+ IH + S+ L N L+ MY CG I +A
Sbjct: 284 --LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSK-----LCNGLMDMYGKCGQIVQAR 336
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
+FR +P +S +SWT+MI A+A G +AL IF M G+
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGS 378
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 117/245 (47%), Gaps = 39/245 (15%)
Query: 85 AHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCAR 144
A +F E+ ++ N + H RS +P ++ LF Q+ A + + T++ +L C+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 145 SGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCW 204
G QVH ++ G KT LI++Y
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYS-------------------------- 130
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
+ G++ + R+F+ + E+++V+W +++G+ RNGK ++AL +F M R V+
Sbjct: 131 --------KYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
+ + +L + + CA L L+ G+ +H + ++G+ L+ L A+I Y+S G+I E
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMV--VVTGRD---LVVLGTAMISFYSSVGLINE 237
Query: 325 AYEVF 329
A +V+
Sbjct: 238 AMKVY 242
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 48/267 (17%)
Query: 37 LFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAK-LLSFYIASGHLLSAHKVFKEV 92
L ++++C +LK L Q+H +V+ G + +L ++SFY + G + A KV+ +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSL 245
Query: 93 K-NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
+ + N +I G R+ + +++ +L ++ R PN+ S L+GC+ + L G
Sbjct: 246 NVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIG 300
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+Q+H L NG+ + + L+++YG
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYG--------------------------------- 327
Query: 212 MRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM--RRAHVDLDQVS 269
+CG + AR IF + ++VV+WT+MI YA NG +AL +F +M + V + V+
Sbjct: 328 -KCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVT 386
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEK 296
+ +SACA G ++ G+ ++EK
Sbjct: 387 FLVVISACAHAGLVKEGKECFGMMKEK 413
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
A +FD++ +R++ + + ++ + R+G L LF ++ RA DL + L AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
L GR +H + + +++ IS ALI MY+ G + ++ VF + ++ +S
Sbjct: 97 LSYPETGRQVHALM---IKQGAETGTIS-KTALIDMYSKYGHLVDSVRVFESVEEKDLVS 152
Query: 340 WTTMICAFAKQGYANEALAIFELM 363
W ++ F + G EAL +F M
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAM 176
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 154/320 (48%), Gaps = 36/320 (11%)
Query: 58 VIHGFSQKSYILAK-------LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
VIHG +S+ + L+ ++ S + A +VF +V +P V+L+ +MI G+ RS
Sbjct: 20 VIHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRS 79
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
++ LF++M + +++++ ++SGC G + ++ + +V
Sbjct: 80 NRLVDALNLFDEMPVRD----VVSWNSMISGCVECGDMNTAVKLFDEMPER----SVVSW 131
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
T ++N +G V+ A+R+F +M ++ WNSM+ Y++ G V+ A ++F +M +
Sbjct: 132 TAMVNGCFRSGK---VDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
NV++WTTMI G +N + +AL LF M R + ++ACA +G +H
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVH 248
Query: 291 TYI-------EEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTM 343
I EE +S +LI YA+C I ++ +VF WT +
Sbjct: 249 GLIIKLGFLYEEYVSA-----------SLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 344 ICAFAKQGYANEALAIFELM 363
+ ++ +AL+IF M
Sbjct: 298 LSGYSLNKKHEDALSIFSGM 317
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 38/288 (13%)
Query: 76 YIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
Y+ G + A K+FK++ +V W MI G ++E +++ LF M + +
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
+ +++ CA + G QVHG ++ G+ ++ +LI Y
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYA----------------- 271
Query: 196 MGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILF 255
C + +R++FD+ + V WT +++GY+ N K AL +F
Sbjct: 272 -----------------NCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIF 314
Query: 256 NKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
+ M R + +Q + + L++C+ LG L G+ +H + KL ++ + + N+L+ M
Sbjct: 315 SGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG-VAVKLGLETDAF---VGNSLVVM 370
Query: 316 YASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
Y+ G + +A VF + K+S +SW ++I A+ G A IF M
Sbjct: 371 YSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 146/316 (46%), Gaps = 41/316 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H I+ GF + Y+ A L++FY + + KVF E + V +W ++ G++ ++
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++ +F+ M PN T++ L+ C+ G L G+++HG + G + F+
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+L+ +Y +G V A VF ++ +++IV WNS
Sbjct: 366 SLVVMYSDSG---NVNDAVSVFIKIFKKSIVSWNS------------------------- 397
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
+I G A++G+ + A ++F +M R + + D+++ LSAC+ G L GR +
Sbjct: 398 ------IIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFY 451
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF-RWMPKRSNISWTTMICAFAKQ 350
Y+ ++ + I ++ + CG ++EA E+ R + K + + W ++ A
Sbjct: 452 YMSSGINHIDRK--IQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
Query: 351 GYANE----ALAIFEL 362
+ A AIF L
Sbjct: 510 SDVDRGEKAAAAIFNL 525
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 36/205 (17%)
Query: 41 LQSCK---TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
L SC TL + ++H V G +++ L+ Y SG++ A VF ++ S+
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
WN +I G A+ + + ++F QM EP+ +T++ LLS C+ G L +G ++
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL--- 449
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
+Y +M + + ++ +R I + M+ + RCG +
Sbjct: 450 -----FY---YMSSGINHI---------------------DRKIQHYTCMVDILGRCGKL 480
Query: 218 EGARRIFDKMMER-NVVTWTTMIAG 241
+ A + ++M+ + N + W +++
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSA 505
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 47/305 (15%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLL-SAHKVFKEVKNPSVTLWNQMIRGHARSE 111
+H+ I+ G + + + L+S Y G + A+ F + + V WN +I G + +
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENN 203
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA---RSGLLREGEQVHGRVLVNGYYPNVF 168
+ F M EPN T + +L CA ++ R G Q+H V+ +
Sbjct: 204 MMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW----- 258
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
++T++ VC NS+++ Y+R G +E A +F +M
Sbjct: 259 LQTHVF---------------------------VC-NSLVSFYLRVGRIEEAASLFTRMG 290
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILF-NKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
+++V+W +IAGYA N + +A LF N + + V D V++++ L CA+L DL G+
Sbjct: 291 SKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGK 350
Query: 288 WIHTYIEEKLSGKSQSLLI---SLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMI 344
IH+YI S L+ S+ NALI YA G AY F M + ISW ++
Sbjct: 351 EIHSYILR------HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAIL 404
Query: 345 CAFAK 349
AFA
Sbjct: 405 DAFAD 409
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 160/335 (47%), Gaps = 16/335 (4%)
Query: 37 LFHLLQSCKTLKYLS---QIHTQIVIHGFS-QKSYILAKLLSFYIASGHLLSAHKVFKEV 92
+ +L C L L+ +IH+ I+ H + + + + L+SFY G +A+ F +
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM 392
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
+ WN ++ A S + + L + + + +T LL C + + +
Sbjct: 393 STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVK 452
Query: 153 QVHGRVLVNGYYPN---VFMKTNLINLYGMAGADFGVEYAQRVFDEMGER-NIVCWNSML 208
+VHG + G + + L++ Y G VEYA ++F + ER +V +NS+L
Sbjct: 453 EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCG---NVEYAHKIFLGLSERRTLVSYNSLL 509
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
+ Y+ G+ + A+ +F +M ++ TW+ M+ YA + +A+ +F +++ + + V
Sbjct: 510 SGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTV 569
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+++ L CA+L L L R H YI G I L L+ +YA CG ++ AY V
Sbjct: 570 TIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-----IRLKGTLLDVYAKCGSLKHAYSV 624
Query: 329 FRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
F+ +R + +T M+ +A G EAL I+ M
Sbjct: 625 FQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHM 659
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 46/315 (14%)
Query: 33 LQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILA--KLLSFYIASGHLLSAHKVFK 90
L L C ++Y +I G S++ +++ LLS Y+ SG A +F
Sbjct: 472 LGNALLDAYAKCGNVEYAHKIFL-----GLSERRTLVSYNSLLSGYVNSGSHDDAQMLFT 526
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE 150
E+ +T W+ M+R +A S P +++ +F +++A PN +T LL CA+ L
Sbjct: 527 EMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHL 586
Query: 151 GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAV 210
Q HG ++ G I L G ++L V
Sbjct: 587 VRQCHGYIIRGGL--------GDIRLKG---------------------------TLLDV 611
Query: 211 YMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSL 270
Y +CG+++ A +F R++V +T M+AGYA +G+ ++AL++++ M +++ D V +
Sbjct: 612 YAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFI 671
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
L+AC G ++ G I+ I K + + + A G +++AY
Sbjct: 672 TTMLTACCHAGLIQDGLQIYDSIRTVHGMKPT---MEQYACAVDLIARGGRLDDAYSFVT 728
Query: 331 WMPKRSNIS-WTTMI 344
MP N + W T++
Sbjct: 729 QMPVEPNANIWGTLL 743
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 141/331 (42%), Gaps = 44/331 (13%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
++++C ++ L+ +H + G S + +L+ Y + K+F+++
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMR-AAEAEPNLLTYSFLLSGCARSGLLREGE 152
+ +WN ++ G + S R+++ F M A E +P+ +T++ +L C R G G+
Sbjct: 84 SLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGK 142
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
+H ++ G + + L+++Y A FG +
Sbjct: 143 SMHSYIIKAGLEKDTLVGNALVSMY----AKFGFIFPD---------------------- 176
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
A FD + +++VV+W +IAG++ N A F M + + + ++
Sbjct: 177 -------AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIAN 229
Query: 273 ALSACAELGD---LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
L CA + R GR IH+Y+ ++ ++ + N+L+ Y G IEEA +F
Sbjct: 230 VLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVC---NSLVSFYLRVGRIEEAASLF 286
Query: 330 RWMPKRSNISWTTMICAFAKQGYANEALAIF 360
M + +SW +I +A +A +F
Sbjct: 287 TRMGSKDLVSWNVVIAGYASNCEWFKAFQLF 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 141/319 (44%), Gaps = 41/319 (12%)
Query: 52 QIHTQIVIHGFSQKS-YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
QIH+ +V + Q ++ L+SFY+ G + A +F + + + WN +I G+A +
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 111 ESPRKSVILF-NQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY-YPNVF 168
K+ LF N + + P+ +T +L CA+ L G+++H +L + Y +
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS 367
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
+ LI+ Y G +A F M ++I+ WN++L
Sbjct: 368 VGNALISFYARFGDTSAAYWA---FSLMSTKDIISWNAIL-------------------- 404
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
+A + K Q L L + + + LD V++++ L C + + +
Sbjct: 405 -----------DAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE 453
Query: 289 IHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICA 346
+H Y ++ L + L NAL+ YA CG +E A+++F + +R +S+ +++
Sbjct: 454 VHGYSVKAGLLHDEEE--PKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 347 FAKQGYANEALAIFELMQS 365
+ G ++A +F M +
Sbjct: 512 YVNSGSHDDAQMLFTEMST 530
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA-HVD 264
S+L +Y +C ++ +++F +M + V W ++ G + + R+ + F M A
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPK 119
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVI-E 323
V+ L C LGD G+ +H+YI + +G + L+ NAL+ MYA G I
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIK--AGLEKDTLV--GNALVSMYAKFGFIFP 175
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+AY F + + +SW +I F++ +A F LM
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM 215
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 97/159 (61%), Gaps = 4/159 (2%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
+S++ +Y G VE A ++F++M ERNVV+WT MI+G+A+ + L L++KMR++ D
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
+ + A LSAC G L GR +H + L +S L ++N+LI MY CG +++
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHC---QTLHMGLKSYL-HISNSLISMYCKCGDLKD 274
Query: 325 AYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
A+ +F + +SW +MI +A+ G A +A+ +FELM
Sbjct: 275 AFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 47/311 (15%)
Query: 41 LQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
++SC + + S H + GF Y+ + L+ Y SG + +A+KVF+E+ +V
Sbjct: 127 VRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV 186
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
W MI G A+ + L+++MR + ++PN T++ LLS C SG L +G VH +
Sbjct: 187 VSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQ 246
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
L G + + +LI++Y G ++ A R+FD+ +++V WNSM
Sbjct: 247 TLHMGLKSYLHISNSLISMYCKCG---DLKDAFRIFDQFSNKDVVSWNSM---------- 293
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN-KMRRAHVDLDQVSLVAALSA 276
IAGYA++G QA+ LF M ++ D ++ + LS+
Sbjct: 294 ---------------------IAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN--NALIHMYASCGVIEEAYEVFRWMPK 334
C G ++ GR + E L LN + L+ + G+++EA E+ MP
Sbjct: 333 CRHAGLVKEGRKFFNLMAE------HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Query: 335 RSN-ISWTTMI 344
+ N + W +++
Sbjct: 387 KPNSVIWGSLL 397
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LL +C L Q +H Q + G +I L+S Y G L A ++F + N
Sbjct: 227 LLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKD 286
Query: 97 VTLWNQMIRGHARSESPRKSVILFN-QMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
V WN MI G+A+ +++ LF M + +P+ +TY +LS C +GL++EG +
Sbjct: 287 VVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF 346
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER-NIVCWNSML 208
+ +G P + + L++L G G ++ A + + M + N V W S+L
Sbjct: 347 NLMAEHGLKPELNHYSCLVDLLGRFGL---LQEALELIENMPMKPNSVIWGSLL 397
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 256 NKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
+ ++R D L +A+ +C D R G H L G S + L ++L+ +
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCL---ALKGGFISD-VYLGSSLVVL 164
Query: 316 YASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
Y G +E AY+VF MP+R+ +SWT MI FA++ + L ++ M+
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH ++ GF ++ +L Y G+L A F E+++ + WN +I RS+
Sbjct: 234 QIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD 293
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
S +++++F + + PN T++ L++ CA L G+Q+HGR+ G+ NV +
Sbjct: 294 S-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELAN 352
Query: 172 NLINLYGMAGADFGVEYAQRVFDEM-GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
LI++Y G + +QRVF E+ RN+V W SM+
Sbjct: 353 ALIDMYAKCG---NIPDSQRVFGEIVDRRNLVSWTSMM---------------------- 387
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
GY +G +A+ LF+KM + + D++ +A LSAC G + G
Sbjct: 388 ---------IGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYF 438
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-KRSNISWTTMICA 346
+E + + N ++ + G I EAYE+ MP K +W ++ A
Sbjct: 439 NVMESEYGINPDR---DIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGA 492
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 48/338 (14%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFY-IASGHLLSAHKVFKEV 92
L +L+SC+ +K L+ +H +V G Y+ +++ Y S + +A +F+++
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQM--RAAEAEPNLLTYSFLLSGCARSGLLRE 150
K + W +I G + ++ QM AE P +T + S S +
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS--VTT 231
Query: 151 GEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAV 210
G+Q+H V+ G+ + N+ NS+L +
Sbjct: 232 GKQIHASVIKRGF----------------------------------QSNLPVMNSILDL 257
Query: 211 YMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSL 270
Y RCG + A+ F +M +++++TW T+I+ R+ +AL++F + + +
Sbjct: 258 YCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTF 316
Query: 271 VAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFR 330
+ ++ACA + L G+ +H I + K+ + L NALI MYA CG I ++ VF
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIFRRGFNKN----VELANALIDMYAKCGNIPDSQRVFG 372
Query: 331 WMPKRSN-ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ R N +SWT+M+ + GY EA+ +F+ M S G
Sbjct: 373 EIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG 410
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 64 QKSYILA-KLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQ 122
+K +ILA L+ Y G + A +F E+ + V W MI G+A S ++ F++
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 123 MRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA 182
M PN T S +L C +L G VHG V+ G ++++ ++N+Y
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA---- 157
Query: 183 DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGY 242
C +M E A IF + +N VTWTT+I G+
Sbjct: 158 -------------------TCSVTM----------EAACLIFRDIKVKNDVTWTTLITGF 188
Query: 243 ARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQ 302
G L ++ +M + ++ + A+ A A + + G+ IH + ++ G
Sbjct: 189 THLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKR--GFQS 246
Query: 303 SLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFEL 362
+L + N+++ +Y CG + EA F M + I+W T+I + ++EAL +F+
Sbjct: 247 NLPVM--NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQR 303
Query: 363 MQSLG 367
+S G
Sbjct: 304 FESQG 308
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 151/330 (45%), Gaps = 43/330 (13%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
++ SC Q+H + G+ + + + ++ Y + +AHKVF+ ++ +
Sbjct: 297 VMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
WN MI + +++ + ++ ++ +M +P+ T+ LL+ +L E V ++
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACII 413
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
FG+ I N++++ Y + G +E
Sbjct: 414 -----------------------KFGLS-----------SKIEISNALISAYSKNGQIEK 439
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL--DQVSLVAALSAC 277
A +F++ + +N+++W +I+G+ NG + L F+ + + V + D +L LS C
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
L LG H Y+ G+ + LI NALI+MY+ CG I+ + EVF M ++
Sbjct: 500 VSTSSLMLGSQTHAYVLRH--GQFKETLI--GNALINMYSQCGTIQNSLEVFNQMSEKDV 555
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+SW ++I A+++ G A+ ++ MQ G
Sbjct: 556 VSWNSLISAYSRHGEGENAVNTYKTMQDEG 585
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 151/349 (43%), Gaps = 57/349 (16%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
LL + L L + I+ G S K I L+S Y +G + A +F+ ++
Sbjct: 395 LLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLIS 454
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAE--PNLLTYSFLLSGCARSGLLREGEQVHGR 157
WN +I G + P + + F+ + +E P+ T S LLS C + L G Q H
Sbjct: 455 WNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAY 514
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
VL +G + + LIN+Y G ++ + VF++M E+++V WNS+++ Y R G
Sbjct: 515 VLRHGQFKETLIGNALINMYSQCGT---IQNSLEVFNQMSEKDVVSWNSLISAYSRHGEG 571
Query: 218 EGARRIFDKMMER-----NVVTWTTMIAGYARNGKCRQALILFNKM-------------- 258
E A + M + + T++ +++ + G + L +FN M
Sbjct: 572 ENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFS 631
Query: 259 -------RRAHVDLDQVSLV---------------AALSACAELGDLRLGRWIHTYIEEK 296
R H+D + SLV A SACA GDL+LG+ + + EK
Sbjct: 632 CLVDLLGRAGHLD-EAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEK 690
Query: 297 LSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP-----KRSNISW 340
S+ + L+N +YA G+ +EA E R + K+ SW
Sbjct: 691 -EKDDPSVYVQLSN----IYAGAGMWKEAEETRRAINMIGAMKQRGCSW 734
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 101 NQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLRE---GEQVHG 156
N+ + G RS R ++ LF + R P+ + S ++ AR LR+ G QVH
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAIT-TARH--LRDTIFGGQVHC 81
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ +G + + L++LY G + ++ FDE+ E ++ W ++L+ + G+
Sbjct: 82 YAIRSGLLCHSHVSNTLLSLYERLG---NLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 217 VEGARRIFDKMMER-NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
+E A +FDKM ER +V W MI G +G ++ LF +M + V D+ LS
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW--MP 333
C + G L G+ +H+ + + + S++ NALI MY +C V+ +A VF +
Sbjct: 199 MC-DYGSLDFGKQVHSLVIKAGFFIASSVV----NALITMYFNCQVVVDACLVFEETDVA 253
Query: 334 KRSNISWTTMICAFAKQGYA-NEALAIFELM 363
R +++ +I A G+ +E+L +F M
Sbjct: 254 VRDQVTFNVVIDGLA--GFKRDESLLVFRKM 282
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 157/352 (44%), Gaps = 33/352 (9%)
Query: 27 ITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH 86
ITT+R L+ +F Q+H + G S++ LLS Y G+L S
Sbjct: 64 ITTARHLRDTIFG-----------GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLK 112
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K F E+ P V W ++ + + +F++M + ++ ++ +++GC SG
Sbjct: 113 KKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERD---DVAIWNAMITGCKESG 169
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS 206
++ + G + F ++++ DFG + V N+
Sbjct: 170 YHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNA 229
Query: 207 MLAVYMRCGNVEGARRIFDK--MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV- 263
++ +Y C V A +F++ + R+ VT+ +I G A K ++L++F KM A +
Sbjct: 230 LITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLVFRKMLEASLR 288
Query: 264 --DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV 321
DL VS++ + S CA +G G I T G + L+S NA + MY+S
Sbjct: 289 PTDLTFVSVMGSCS-CAAMGHQVHGLAIKT-------GYEKYTLVS--NATMTMYSSFED 338
Query: 322 IEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
A++VF + ++ ++W TMI ++ + A+++++ M +G KP
Sbjct: 339 FGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG---VKP 387
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L + S +L SQ H ++ HG +++ I L++ Y G + ++ +VF ++
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKD 554
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMR-AAEAEPNLLTYSFLLSGCARSGLLREGEQV- 154
V WN +I ++R +V + M+ + P+ T+S +LS C+ +GL+ EG ++
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIF 614
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRC 214
+ V +G NV + L++L G AG E ++ ++ + W ++ +
Sbjct: 615 NSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAH 674
Query: 215 GNVEGARRIFDKMMER 230
G+++ + + +ME+
Sbjct: 675 GDLKLGKMVAKLLMEK 690
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 160/339 (47%), Gaps = 52/339 (15%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV--KN 94
LL++C +L+ + ++H I + I +KL+ Y + G+ AH+VF + ++
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
S WN +I G+A ++ L+ QM +P+ T+ +L C G ++ GE +
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRC 214
H ++ G+ +V++ N+++ +Y +C
Sbjct: 218 HRDLVKEGFGYDVYV----------------------------------LNALVVMYAKC 243
Query: 215 GNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
G++ AR +FD + ++ V+W +M+ GY +G +AL +F M + ++ D+V++ + L
Sbjct: 244 GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303
Query: 275 SACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK 334
A + + GR +H ++ + +S+ NALI +Y+ G + +A +F M +
Sbjct: 304 ---ARVLSFKHGRQLHGWVIR----RGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE 356
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
R +SW +I A +K + L FE M AN AKP
Sbjct: 357 RDTVSWNAIISAHSKN---SNGLKYFEQMHR--AN-AKP 389
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 165 PNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIF 224
P +F L Y + D GV + + N+ + ++ +Y CG E A +F
Sbjct: 92 PEIFASL-LETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVF 150
Query: 225 DKMMERN--VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD 282
D+M +R+ W ++I+GYA G+ A+ L+ +M V D+ + L AC +G
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGS 210
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTT 342
+++G IH + ++ G +L NAL+ MYA CG I +A VF +P + +SW +
Sbjct: 211 VQIGEAIHRDLVKEGFGYDVYVL----NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNS 266
Query: 343 MICAFAKQGYANEALAIFELMQSLGANEAK 372
M+ + G +EAL IF LM G K
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPDK 296
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 48/313 (15%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
Y + E+ + + T R+L+ +++ IH +V GF Y+L L+
Sbjct: 183 YFQMAEDGVKPDRFTFPRVLKA-----CGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALV 237
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y G ++ A VF + + WN M+ G+ +++ +F M EP+ +
Sbjct: 238 VMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKV 297
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
S +L AR + G Q+HG V+ G + + LI LY G + A +F
Sbjct: 298 AISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQ---LGQACFIF 351
Query: 194 DEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
D+M ER+ V WN++++ + + N L
Sbjct: 352 DQMLERDTVSWNAIISAHSKNSN----------------------------------GLK 377
Query: 254 LFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALI 313
F +M RA+ D ++ V+ LS CA G + G + + + ++ + + ++
Sbjct: 378 YFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPK---MEHYACMV 434
Query: 314 HMYASCGVIEEAY 326
++Y G++EEAY
Sbjct: 435 NLYGRAGMMEEAY 447
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
++++++ I + + S +L + L + K+ Q+H ++ G + + L+
Sbjct: 284 FRLMVQNGIEPDKVAISSVLARVL--------SFKHGRQLHGWVIRRGMEWELSVANALI 335
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y G L A +F ++ WN +I H+++ + K F QM A A+P+ +
Sbjct: 336 VLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLK---YFEQMHRANAKPDGI 392
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
T+ +LS CA +G++ +GE++ + G P + ++NLYG AG E +
Sbjct: 393 TFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAG--MMEEAYSMI 450
Query: 193 FDEMG-ERNIVCWNSMLAVYMRCGNVE----GARRIFD 225
EMG E W ++L GN + A+R+F+
Sbjct: 451 VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE 488
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 150/330 (45%), Gaps = 40/330 (12%)
Query: 40 LLQSCKTLKYLS--QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
LL S +T + Q+H +V G S + L++FY S + + F++ S
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSS 81
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
T W+ +I A++E P S+ +M A P+ CA G VH
Sbjct: 82 TTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCL 141
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
+ GY +VF+ ++L+++Y +CG +
Sbjct: 142 SMKTGYDADVFVGSSLVDMYA----------------------------------KCGEI 167
Query: 218 EGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSAC 277
AR++FD+M +RNVVTW+ M+ GYA+ G+ +AL LF + ++ ++ S + +S C
Sbjct: 168 VYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVC 227
Query: 278 AELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
A L LGR IH S + ++L+ +Y+ CGV E AY+VF +P ++
Sbjct: 228 ANSTLLELGRQIHGL----SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNL 283
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQSLG 367
W M+ A+A+ + + + +F+ M+ G
Sbjct: 284 GIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 38/281 (13%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H + G+ ++ + L+ Y G ++ A K+F E+ +V W+ M+ G+A+
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
+++ LF + N ++S ++S CA S LL G Q+HG + + + + F+ ++
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSS 257
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
L++LY G G A +VF+E+ +N+ WN+ML
Sbjct: 258 LVSLYSKCGVPEG---AYQVFNEVPVKNLGIWNAML------------------------ 290
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
YA++ ++ + LF +M+ + + + ++ + L+AC+ G + GR+
Sbjct: 291 -------KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQ 343
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
++E + S L+ M G ++EA EV MP
Sbjct: 344 MKESRIEPTDKHYAS----LVDMLGRAGRLQEALEVITNMP 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 42/236 (17%)
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
LL AR+ +G Q+HG V+ +G + NLIN Y + Q FD
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKS---------QLPFD--- 68
Query: 198 ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK 257
+RR F+ +++ TW+++I+ +A+N +L K
Sbjct: 69 ----------------------SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKK 106
Query: 258 MRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQ-SLLISLNNALIHMY 316
M ++ D L +A +CA L +GR +H LS K+ + + ++L+ MY
Sbjct: 107 MMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC-----LSMKTGYDADVFVGSSLVDMY 161
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFE--LMQSLGANE 370
A CG I A ++F MP+R+ ++W+ M+ +A+ G EAL +F+ L ++L N+
Sbjct: 162 AKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND 217
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L+S Y G A++VF EV ++ +WN M++ +A+ +K + LF +M+ + +PN
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPN 317
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR 191
+T+ +L+ C+ +GL+ EG ++ + P +L+++ G AG ++ A
Sbjct: 318 FITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGR---LQEALE 374
Query: 192 VFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIA---GYARNGK 247
V M + W ++L N E A DK+ E V+ I+ YA +G+
Sbjct: 375 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 434
Query: 248 CRQA 251
A
Sbjct: 435 FEDA 438
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 104/179 (58%), Gaps = 20/179 (11%)
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
A+++FDEM +RNI+ WN +++ YM+ G ++ AR++FD M ERNVV+WT ++ GY NGK
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
A LF KM ++VS L +G L+ GR I++ + K ++
Sbjct: 127 DVAESLFWKMPEK----NKVSWTVML-----IGFLQDGR-----IDD--ACKLYEMIPDK 170
Query: 309 NN----ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
+N ++IH G ++EA E+F M +RS I+WTTM+ + + ++A IF++M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 150/325 (46%), Gaps = 54/325 (16%)
Query: 80 GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
G + A K+F + S++ WN M+ G+ + PR + LF++M + N+++++ L+
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----PDRNIISWNGLV 86
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
SG ++G + E +V + NV T L+ Y G V+ A+ +F +M E+
Sbjct: 87 SGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGK---VDVAESLFWKMPEK 139
Query: 200 NIVCWNSMLAVYMR-----------------------------C--GNVEGARRIFDKMM 228
N V W ML +++ C G V+ AR IFD+M
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
ER+V+TWTTM+ GY +N + A +F+ M +VS + L +G ++ GR
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSML-----MGYVQNGRI 250
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFA 348
EE +I+ N A+I G I +A VF M +R++ SW T+I
Sbjct: 251 EDA--EELFEVMPVKPVIACN-AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHE 307
Query: 349 KQGYANEALAIFELMQSLGANEAKP 373
+ G+ EAL +F LMQ G P
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFP 332
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 154/358 (43%), Gaps = 69/358 (19%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
L+S Y+ +G + A KVF + +V W +++G+ + + LF +M E N
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKN 140
Query: 132 LLTYSFLLSG----------------------CARS----GLLREGEQVHGRVLVNGYYP 165
++++ +L G AR+ GL +EG R + +
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 166 -NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGA---- 220
+V T ++ YG V+ A+++FD M E+ V W SML Y++ G +E A
Sbjct: 201 RSVITWTTMVTGYGQNNR---VDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF 257
Query: 221 ---------------------------RRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
RR+FD M ERN +W T+I + RNG +AL
Sbjct: 258 EVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALD 317
Query: 254 LFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALI 313
LF M++ V +L++ LS CA L L G+ +H +L + + + + L+
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA----QLVRCQFDVDVYVASVLM 373
Query: 314 HMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEA 371
MY CG + ++ +F P + I W ++I +A G EAL +F M G+ +
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 37 LFHLLQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +L C +L L Q+H Q+V F Y+ + L++ YI G L+ + +F
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP 393
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMR-AAEAEPNLLTYSFLLSGCARSGLLREGE 152
+ + +WN +I G+A +++ +F +M + +PN +T+ LS C+ +G++ EG
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 153 QVHGRV-LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAV 210
+++ + V G P ++++ G AG A + D M E + W S+L
Sbjct: 454 KIYESMESVFGVKPITAHYACMVDMLGRAGR---FNEAMEMIDSMTVEPDAAVWGSLLGA 510
Query: 211 YMRCGNVEGARRIFDKMME---RNVVTWTTMIAGYARNGK 247
++ A K++E N T+ + YA G+
Sbjct: 511 CRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGR 550
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
R G + AR++FD +++ +W +M+AGY N R A LF++M D + +S
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----PDRNIISWNG 84
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
+S + G++ R + + E+ ++S AL+ Y G ++ A +F M
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPER-------NVVSW-TALVKGYVHNGKVDVAESLFWKM 136
Query: 333 PKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
P+++ +SWT M+ F + G ++A ++E++
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD 169
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 152/346 (43%), Gaps = 59/346 (17%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHK-----VFKEVKN 94
L Q+ KTL QIH Q+VI+G S + KL+ Y + S+ K VF +
Sbjct: 14 LQQNSKTLIQAKQIHAQLVINGCHDNS-LFGKLIGHYCSKPSTESSSKLAHLLVFPRFGH 72
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA--EPNLLTYSFLLSGCARSGL---LR 149
P L+N +++ P S+ +F + + N T+ F+L CARS LR
Sbjct: 73 PDKFLFNTLLK----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALR 128
Query: 150 EGEQVHGRVLVNGY-YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
G VHG V G+ Y + + T L++ Y
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYA------------------------------ 158
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYAR-----NGKCRQALILFNKMR--RA 261
+ G++ AR++FD+M ER VTW MI GY N R+A++LF + +
Sbjct: 159 ----KNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGS 214
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV 321
V ++V LSA ++ G L +G +H YIE+ G + + + + AL+ MY+ CG
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL--GFTPEVDVFIGTALVDMYSKCGC 272
Query: 322 IEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ A+ VF M ++ +WT+M A G NE + M G
Sbjct: 273 LNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESG 318
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 133/303 (43%), Gaps = 47/303 (15%)
Query: 53 IHTQIVIHGFSQKSYILAK-LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHAR-- 109
+H + GF +S ++ LL FY +G L A KVF E+ + WN MI G+
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 110 ---SESPRKSVILFNQMR--AAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
+ + RK+++LF + + P T +LS +++GLL G VHG + G+
Sbjct: 193 DKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFT 252
Query: 165 P--NVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARR 222
P +VF+ T L+++Y G C N+ +V
Sbjct: 253 PEVDVFIGTALVDMYSKCG---------------------CLNNAFSV------------ 279
Query: 223 IFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD 282
F+ M +NV TWT+M G A NG+ + L N+M + + ++++ + LSA +G
Sbjct: 280 -FELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGL 338
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTT 342
+ G + ++ + + +I ++ + G I+EAY+ MP + +
Sbjct: 339 VEEGIELFKSMKTRF---GVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLR 395
Query: 343 MIC 345
+C
Sbjct: 396 SLC 398
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 145 SGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQR-----VFDEMGER 199
S L + +Q+H ++++NG + N L G + E + + VF G
Sbjct: 18 SKTLIQAKQIHAQLVINGCHDNSLFG----KLIGHYCSKPSTESSSKLAHLLVFPRFGHP 73
Query: 200 NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMR 259
+ +N++L +C E + RIF A YA + +L+ N
Sbjct: 74 DKFLFNTLL----KCSKPEDSIRIF---------------ANYAS----KSSLLYLN--- 107
Query: 260 RAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASC 319
+ V ++ A + A LR+GR +H ++ KL +S LI L+H YA
Sbjct: 108 ----ERTFVFVLGACARSASSSALRVGRIVHGMVK-KLGFLYESELI--GTTLLHFYAKN 160
Query: 320 GVIEEAYEVFRWMPKRSNISWTTMI---CAFAKQGYAN--EALAIFELMQSLGA 368
G + A +VF MP+R++++W MI C+ +G N +A+ +F G+
Sbjct: 161 GDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGS 214
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 146/335 (43%), Gaps = 42/335 (12%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIH-GFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP 95
L H S K+L + +I + I+ + +L+KL++ + L A K+F +V +
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 96 SV---TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
S+ +W M G++R+ SPR ++I++ M + EP + S L C LR G
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGR 256
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
+H +++ + + L+ LY +G + A++VFD M ERN+V WNS+++V
Sbjct: 257 GIHAQIVKRKEKVDQVVYNVLLKLYMESGL---FDDARKVFDGMSERNVVTWNSLISV-- 311
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
++ + + LF KM+ + +L
Sbjct: 312 -----------------------------LSKKVRVHEMFNLFRKMQEEMIGFSWATLTT 342
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
L AC+ + L G+ IH I + LL N+L+ MY CG +E + VF M
Sbjct: 343 ILPACSRVAALLTGKEIHAQILKSKEKPDVPLL----NSLMDMYGKCGEVEYSRRVFDVM 398
Query: 333 PKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ SW M+ +A G E + +FE M G
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG 433
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 10/226 (4%)
Query: 41 LQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSV 97
L++C LK L IH QIV + LL Y+ SG A KVF + +V
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
WN +I ++ + LF +M+ + T + +L C+R L G+++H +
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNV 217
+L + P+V + +L+++YG G VEY++RVFD M +++ WN ML Y GN+
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGE---VEYSRRVFDVMLTKDLASWNIMLNCYAINGNI 419
Query: 218 EGARRIFDKMMERNV----VTWTTMIAGYARNGKCRQALILFNKMR 259
E +F+ M+E V +T+ +++G + G L LF +M+
Sbjct: 420 EEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMK 465
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 12/268 (4%)
Query: 101 NQMIRGHARSESPRKSVILFNQMRAAEAEP-NLLTYSFLLSGCARSGLLREGEQVHGRVL 159
+ + +A + +++ LF QM ++ A P + +S L CA + G VH +
Sbjct: 16 TKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSV 75
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
+ + N F+ L+++YG V +A+++FDE+ +RN V WN+M++ Y CG V+
Sbjct: 76 KSNFLSNPFVGCALLDMYGKC---LSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 220 ARRIFDKM-MERNVVTWTTMIAGY--ARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
A +++ M + N ++ +I G +G R A+ + KM + ++L+A +SA
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 277 CAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS 336
C+ +G RL + IH+Y L L + L+ Y CG I VF M R
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQL----KSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQ 364
++W+++I A+A G A AL F+ M+
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEME 275
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 135/352 (38%), Gaps = 75/352 (21%)
Query: 33 LQQHLFHL-LQSCKTLKYL---SQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKV 88
L H+F L L+SC +H V F ++ LL Y + A K+
Sbjct: 46 LDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKL 105
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM------------------------R 124
F E+ + +WN MI + +++V L+ M R
Sbjct: 106 FDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR 165
Query: 125 AAEA---------EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN 175
A E +PNL+T L+S C+ G R +++H N P+ +K+ L+
Sbjct: 166 AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVE 225
Query: 176 LYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTW 235
YG RCG++ + +FD M +R+VV W
Sbjct: 226 AYG----------------------------------RCGSIVYVQLVFDSMEDRDVVAW 251
Query: 236 TTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEE 295
+++I+ YA +G AL F +M A V D ++ + L AC+ G L Y +
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAG---LADEALVYFKR 308
Query: 296 KLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI-SWTTMICA 346
+ L+ + + G EEAY+V + MP++ +W ++ A
Sbjct: 309 MQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGA 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAH-VDLDQVSLVAALSACAELGDLRLGRWI 289
+++ T ++ YA G QAL LF +M + + LD AL +CA LG +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 290 HTYIEEKLSGKSQSLLIS-LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFA 348
H + S KS L + AL+ MY C + A ++F +P+R+ + W MI +
Sbjct: 71 HAH-----SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYT 125
Query: 349 KQGYANEALAIFELMQ 364
G EA+ ++E M
Sbjct: 126 HCGKVKEAVELYEAMD 141
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H + S++ L+ Y + + A +F E N + WN M+ G+ +S
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSH 496
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
K++ LF M + T + + C + +G+QVH + +GY ++++ +
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
++++Y ++CG++ A+ FD + +
Sbjct: 557 GILDMY----------------------------------VKCGDMSAAQFAFDSIPVPD 582
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
V WTTMI+G NG+ +A +F++MR V D+ ++ A + L L GR IH
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
KL+ + + +L+ MYA CG I++AY +F+ + + +W M+ A+ G
Sbjct: 643 N-ALKLNCTNDPFV---GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 352 YANEALAIFELMQSLGANEAK 372
E L +F+ M+SLG K
Sbjct: 699 EGKETLQLFKQMKSLGIKPDK 719
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 50/350 (14%)
Query: 54 HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS--- 110
H +I+ + + +++ L+S Y G L A +VF ++ + + WN ++ +A+S
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 111 --ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF 168
E+ +++ +LF +R + +T S +L C SG + E HG G + F
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGA-------- 220
+ L+N+Y G V+ + +F+EM R++V WN ML Y+ G E A
Sbjct: 182 VAGALVNIYLKFGK---VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 221 ------RRIFDKMMER------------------------NVVTWTTMIAGYARNGKCRQ 250
I +++ R ++ ++ Y +G+
Sbjct: 239 SSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSA 298
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
L F M + V+ DQV+ + L+ ++ L LG+ +H + KL L+++++N
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC-MALKL---GLDLMLTVSN 354
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIF 360
+LI+MY A VF M +R ISW ++I A+ G EA+ +F
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 13/184 (7%)
Query: 192 VFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC--- 248
F+E ER ++ N+++++Y +CG++ ARR+FDKM +R++V+W +++A YA++ +C
Sbjct: 67 TFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVE 124
Query: 249 --RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLL 305
+QA +LF +R+ V +++L L C G + H Y + L G
Sbjct: 125 NIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE---- 180
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
+ AL+++Y G ++E +F MP R + W M+ A+ + G+ EA+ + S
Sbjct: 181 -FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239
Query: 366 LGAN 369
G N
Sbjct: 240 SGLN 243
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 34/230 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H + G+ ++ + +L Y+ G + +A F + P W MI G +
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
++ +F+QMR P+ T + L + L +G Q+H L + F+ T
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 657
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+L+++Y G+ ++ A +F + NI WN+ML
Sbjct: 658 SLVDMYAKCGS---IDDAYCLFKRIEMMNITAWNAML----------------------- 691
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
G A++G+ ++ L LF +M+ + D+V+ + LSAC+ G
Sbjct: 692 --------VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 128/320 (40%), Gaps = 46/320 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H + G + L++ Y A VF + + WN +I G A++
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG----EQVHGRVLVNGYYPNV 167
++V LF Q+ +P+ T + +L + L EG +QVH + +
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDS 452
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
F+ T LI+ Y RN RC ++ A +F++
Sbjct: 453 FVSTALIDAYS--------------------RN------------RC--MKEAEILFERH 478
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
++V W M+AGY ++ + L LF M + D +L C L + G+
Sbjct: 479 -NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
+H Y + SG L +S + ++ MY CG + A F +P +++WTTMI
Sbjct: 538 QVHAYAIK--SGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGC 593
Query: 348 AKQGYANEALAIFELMQSLG 367
+ G A +F M+ +G
Sbjct: 594 IENGEEERAFHVFSQMRLMG 613
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 43 SCKT-LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWN 101
SC T L+ QIH + + ++ L+ Y G + A+ +FK ++ ++T WN
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688
Query: 102 QMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG----EQVHGR 157
M+ G A+ ++++ LF QM++ +P+ +T+ +LS C+ SGL+ E +HG
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGN 216
G P + + L + G AG V+ A+ + + M E + + ++LA G+
Sbjct: 749 Y---GIKPEIEHYSCLADALGRAGL---VKQAENLIESMSMEASASMYRTLLAACRVQGD 802
Query: 217 VEGARRIFDKMME 229
E +R+ K++E
Sbjct: 803 TETGKRVATKLLE 815
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 158/340 (46%), Gaps = 50/340 (14%)
Query: 38 FHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLS-AHKVFKEVKNPS 96
+L+ CK+L+ L QIH QI+ G S +Y L+KLL +++S LS A + +++ NPS
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLL--HLSSTVCLSYALSILRQIPNPS 70
Query: 97 VTLWNQMIRGHARSESPRKSVI---LFNQM---RAAEAEPNLLTYSFLLSGCARSGLL-R 149
V L+N +I + + ++ + L++Q+ R+ PN TY L R
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 150 EGEQVHGRVL--VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSM 207
G +H VL + + F++ L+ Y G + A+ +F+ + E ++ WN++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGK---LREARSLFERIREPDLATWNTL 187
Query: 208 LAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
LA Y ++ + L+LF +M+ V ++
Sbjct: 188 LAAYANSEEIDSDEEV----------------------------LLLFMRMQ---VRPNE 216
Query: 268 VSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYE 327
+SLVA + +CA LG+ G W H Y+ + + +L + +LI +Y+ CG + A +
Sbjct: 217 LSLVALIKSCANLGEFVRGVWAHVYVLK----NNLTLNQFVGTSLIDLYSKCGCLSFARK 272
Query: 328 VFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
VF M +R + MI A G+ E + +++ + S G
Sbjct: 273 VFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG 312
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 44/302 (14%)
Query: 54 HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE-- 111
H + + ++ A L+ FY G L A +F+ ++ P + WN ++ +A SE
Sbjct: 138 HVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEI 197
Query: 112 -SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMK 170
S + ++LF +M + PN L+ L+ CA G G H VL N N F+
Sbjct: 198 DSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVG 254
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
T+LI+LY +CG + AR++FD+M +R
Sbjct: 255 TSLIDLYS----------------------------------KCGCLSFARKVFDEMSQR 280
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
+V + MI G A +G ++ + L+ + + D + V +SAC+ G + G I
Sbjct: 281 DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIF 340
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAK 349
++ + + + L+ + G +EEA E + MP + N + W + + +
Sbjct: 341 NSMKAVYGIEPK---VEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQT 397
Query: 350 QG 351
G
Sbjct: 398 HG 399
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L L++SC L + H ++ + + ++ L+ Y G L A KVF E+
Sbjct: 219 LVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMS 278
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
V+ +N MIRG A ++ + L+ + + P+ T+ +S C+ SGL+ EG Q
Sbjct: 279 QRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQ 338
Query: 154 VHGRV-LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER-NIVCWNSMLAVY 211
+ + V G P V L++L G +G +E A+ +M + N W S L
Sbjct: 339 IFNSMKAVYGIEPKVEHYGCLVDLLGRSGR---LEEAEECIKKMPVKPNATLWRSFLGSS 395
Query: 212 MRCGNVE 218
G+ E
Sbjct: 396 QTHGDFE 402
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 122/243 (50%), Gaps = 41/243 (16%)
Query: 128 AEPNLLTYSFLLSG---CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADF 184
+E LL+ S L C+ + ++ +HG + NG+ N+ +K LI+LY
Sbjct: 5 SENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLY------- 57
Query: 185 GVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYAR 244
++ G+V+ AR++FD++ +R+VV+WT MI+ ++R
Sbjct: 58 ---------------------------LKQGDVKHARKLFDRISKRDVVSWTAMISRFSR 90
Query: 245 NGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSL 304
G AL+LF +M R V +Q + + L +C +LG L+ G IH +E+ G
Sbjct: 91 CGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK---GNCAGN 147
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
LI + +AL+ +YA CG +EEA F M +R +SW MI + A+ + ++F+LM
Sbjct: 148 LI-VRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 365 SLG 367
+ G
Sbjct: 207 TEG 209
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 140/329 (42%), Gaps = 41/329 (12%)
Query: 40 LLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L+SCK L L QIH + + + + LLS Y G + A F +K
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ WN MI G+ + S LF M +P+ T+ LL L ++HG
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ G+ + + +L+N Y++CG+
Sbjct: 239 LAIKLGFGRSSALIRSLVN----------------------------------AYVKCGS 264
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKC-RQALILFNKMRRAHVDLDQVSLVAALS 275
+ A ++ + +R++++ T +I G+++ C A +F M R +D+V + + L
Sbjct: 265 LANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLK 324
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
C + + +GR IH + L ++L N+LI MYA G IE+A F M ++
Sbjct: 325 ICTTIASVTIGRQIHGF---ALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK 381
Query: 336 SNISWTTMICAFAKQGYANEALAIFELMQ 364
SWT++I + + G +A+ ++ M+
Sbjct: 382 DVRSWTSLIAGYGRHGNFEKAIDLYNRME 410
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 141/317 (44%), Gaps = 39/317 (12%)
Query: 48 KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGH 107
K L IH + +GF + L+ Y+ G + A K+F + V W MI
Sbjct: 29 KQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRF 88
Query: 108 ARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
+R +++LF +M + + N TY +L C G L+EG Q+HG V N+
Sbjct: 89 SRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNL 148
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
+++ L++LY G +E A+ FD M ER++V WN+M+ Y + + +F M
Sbjct: 149 IVRSALLSLYARCGK---MEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLM 205
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
+ GK + F + RA + + + +V+ L A ++LG
Sbjct: 206 LTE---------------GK-KPDCFTFGSLLRASIVVKCLEIVSELHGLA----IKLG- 244
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
G+S +L+ SL NA Y CG + A+++ KR +S T +I F
Sbjct: 245 ----------FGRSSALIRSLVNA----YVKCGSLANAWKLHEGTKKRDLLSCTALITGF 290
Query: 348 AKQ-GYANEALAIFELM 363
++Q ++A IF+ M
Sbjct: 291 SQQNNCTSDAFDIFKDM 307
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 163/366 (44%), Gaps = 47/366 (12%)
Query: 12 SSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAK 71
S +Q++L E + T +L+ + K L+ +S++H + GF + S ++
Sbjct: 200 SLFQLMLTEGKKPDCFTFGSLLRASIV-----VKCLEIVSELHGLAIKLGFGRSSALIRS 254
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVI-LFNQMRAAEAEP 130
L++ Y+ G L +A K+ + K + +I G ++ + +F M + +
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
+ + S +L C + G Q+HG F ++ +Q
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHG---------------------------FALKSSQ 347
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
FD + NS++ +Y + G +E A F++M E++V +WT++IAGY R+G +
Sbjct: 348 IRFD------VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEK 401
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
A+ L+N+M + + V+ ++ LSAC+ G LG I+ + K +++ +S
Sbjct: 402 AIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLS--- 458
Query: 311 ALIHMYASCGVIEEAYEVFR---WMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+I M A G +EEAY + R + S+ +W + A + G N L+ Q L
Sbjct: 459 CIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHG--NVQLSKVAATQLLS 516
Query: 368 ANEAKP 373
KP
Sbjct: 517 MEPRKP 522
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
KVF ++ +V WN +I + ++ ++ F M E +P+ +++ + + S
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS 206
+++ NVF YG+ G EY + +F +S
Sbjct: 229 SIKKA--------------NVF--------YGLM-LKLGDEYVKDLF---------VVSS 256
Query: 207 MLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILF-NKMRRAHVDL 265
+++Y G++E +RR+FD +ERN+ W TMI Y +N +++ LF + +
Sbjct: 257 AISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS 316
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
D+V+ + A SA + L + LGR H ++ + + L I + N+L+ MY+ CG + ++
Sbjct: 317 DEVTYLLAASAVSALQQVELGRQFHGFVSKNF----RELPIVIVNSLMVMYSRCGSVHKS 372
Query: 326 YEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ VF M +R +SW TMI AF + G +E L + MQ G
Sbjct: 373 FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 414
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 163/348 (46%), Gaps = 46/348 (13%)
Query: 27 ITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSY------ILAKLLSFYIASG 80
I + I+ + +LL + + L Q+ HGF K++ I+ L+ Y G
Sbjct: 309 IGSKEIVSDEVTYLL-AASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCG 367
Query: 81 HLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLS 140
+ + VF ++ V WN MI ++ + ++L +M+ + + +T + LLS
Sbjct: 368 SVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLS 427
Query: 141 GCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERN 200
+ G+Q H ++ G M + LI++Y +G + +Q++F+ G
Sbjct: 428 AASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGL---IRISQKLFEGSG--- 480
Query: 201 IVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRR 260
ER+ TW +MI+GY +NG + ++F KM
Sbjct: 481 --------------------------YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 261 AHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASC 319
++ + V++ + L AC+++G + LG+ +H + I + L Q++ ++ +AL+ MY+
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD---QNVFVA--SALVDMYSKA 569
Query: 320 GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
G I+ A ++F +R+++++TTMI + + G A+++F MQ G
Sbjct: 570 GAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESG 617
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 41/277 (14%)
Query: 72 LLSFYIASGHLLSAHKVFKE--VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE 129
L+ Y SG + + K+F+ WN MI G+ ++ K+ ++F +M
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
PN +T + +L C++ G + G+Q+HG + NVF+ + L+++Y AGA ++YA
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGA---IKYA 575
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
+ +F + ERN V + TTMI GY ++G
Sbjct: 576 EDMFSQTKERNSVTY-------------------------------TTMILGYGQHGMGE 604
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
+A+ LF M+ + + D ++ VA LSAC+ G + G I + E + + S
Sbjct: 605 RAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYC-- 662
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNIS--WTTMI 344
+ M G + EAYE + + + NI+ W +++
Sbjct: 663 -CITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLL 698
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 137/303 (45%), Gaps = 48/303 (15%)
Query: 67 YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILF-NQMRA 125
++++ +S Y G + S+ +VF ++ +WN MI + +++ +S+ LF + +
Sbjct: 252 FVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGS 311
Query: 126 AEAEPNLLTYSFLLSGCARSGL--LREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGAD 183
E + +TY LL+ A S L + G Q HG V N + + +L+ +Y G+
Sbjct: 312 KEIVSDEVTY--LLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGS- 368
Query: 184 FGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYA 243
V + VF M ER++V WN TMI+ +
Sbjct: 369 --VHKSFGVFLSMRERDVVSWN-------------------------------TMISAFV 395
Query: 244 RNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQ 302
+NG + L+L +M++ +D +++ A LSA + L + +G+ H + I + +
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ---- 451
Query: 303 SLLISLNNALIHMYASCGVIEEAYEVFR--WMPKRSNISWTTMICAFAKQGYANEALAIF 360
+N+ LI MY+ G+I + ++F +R +W +MI + + G+ + +F
Sbjct: 452 --FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVF 509
Query: 361 ELM 363
M
Sbjct: 510 RKM 512
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 42/304 (13%)
Query: 73 LSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
LS G+ A ++F + P+ LWN +I G + P ++++ +++M+ N
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 133 --LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLY--GMAGAD-FGVE 187
TYS L CA + L+ G+ VH ++ + + +L+N+Y + D F +
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 188 YAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
++VFD M +N+V WN++++ Y++ G RN +
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTG----------------------------RNAE 197
Query: 248 -CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
CRQ F M R V VS V A + ++ + + KL + L
Sbjct: 198 ACRQ----FGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLM-LKLGDEYVKDLF 252
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSL 366
+++A I MYA G IE + VF +R+ W TMI + + E++ +F ++++
Sbjct: 253 VVSSA-ISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--LEAI 309
Query: 367 GANE 370
G+ E
Sbjct: 310 GSKE 313
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRA--HV 263
S L+ + GN + AR++FD + + V W T+I G+ N +AL+ +++M++
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
+ D + + L ACAE +L+ G+ +H ++ L S+ ++N+L++MY SC
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSR----VVHNSLMNMYVSCLNAP 159
Query: 324 EAYE------VFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
+ +E VF M +++ ++W T+I + K G EA F +M + E KP
Sbjct: 160 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM---EVKP 212
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 138/300 (46%), Gaps = 40/300 (13%)
Query: 70 AKLLSFYIASGHLL-SAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQM-RAAE 127
+KL+ Y HL ++ VF + ++ WN +I +RS KS+ LF +M R +
Sbjct: 51 SKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESC 110
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVE 187
P+ T +L C+ S + G+ +H L G+ ++F+ + L+
Sbjct: 111 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALV------------- 157
Query: 188 YAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
+Y+ G + AR++FD M R+ V +T M GY + G+
Sbjct: 158 ---------------------IMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 196
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
L +F +M + LD V +V+ L AC +LG L+ G+ +H + + S L ++
Sbjct: 197 AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCS----CLGLN 252
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
L NA+ MY C +++ A+ VF M +R ISW+++I + G + +F+ M G
Sbjct: 253 LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG 312
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 123/285 (43%), Gaps = 38/285 (13%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
IH + GFS ++ + L+ Y+ G LL A K+F ++ L+ M G+ +
Sbjct: 137 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 196
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
+ +F +M + + + LL C + G L+ G+ VHG
Sbjct: 197 AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWC-------------- 242
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
I G + G N++ +Y++C ++ A +F M R+V
Sbjct: 243 -IRRCSCLGLNLG-------------------NAITDMYVKCSILDYAHTVFVNMSRRDV 282
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
++W+++I GY +G + LF++M + ++ + V+ + LSACA G L W++
Sbjct: 283 ISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH-GGLVEKSWLYFR 341
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN 337
+ ++ + + + ++ + G++EEA + MP + +
Sbjct: 342 LMQEYNIVPE---LKHYASVADCMSRAGLLEEAEKFLEDMPVKPD 383
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 141/320 (44%), Gaps = 38/320 (11%)
Query: 48 KYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGH 107
K L IH ++ G + ++ Y +G ++ A K+F + +P + LWN MI G+
Sbjct: 123 KGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY 182
Query: 108 ARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
K + LFN M+ +PN T L SG LL VH L +
Sbjct: 183 GCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
++ L+N+Y + A VF+ + E ++V +S++ Y RCGN
Sbjct: 243 YVGCALVNMYSRC---MCIASACSVFNSISEPDLVACSSLITGYSRCGNH---------- 289
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
++AL LF ++R + D V + L +CAEL D G+
Sbjct: 290 ---------------------KEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGK 328
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
+H+Y+ L I + +ALI MY+ CG+++ A +F +P+++ +S+ ++I
Sbjct: 329 EVHSYVIR----LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 348 AKQGYANEALAIFELMQSLG 367
G+A+ A F + +G
Sbjct: 385 GLHGFASTAFEKFTEILEMG 404
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 118/275 (42%), Gaps = 43/275 (15%)
Query: 59 IHGFSQK------SYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H F K SY+ L++ Y + SA VF + P + + +I G++R +
Sbjct: 229 VHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGN 288
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
++++ LF ++R + +P+ + + +L CA G++VH V+ G
Sbjct: 289 HKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGL--------- 339
Query: 173 LINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV 232
E +I ++++ +Y +CG ++ A +F + E+N+
Sbjct: 340 -------------------------ELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNI 374
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
V++ ++I G +G A F ++ + D+++ A L C G L G+ I
Sbjct: 375 VSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFER 434
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYE 327
++ + + Q+ ++ + G +EEA+E
Sbjct: 435 MKSEFGIEPQT---EHYVYMVKLMGMAGKLEEAFE 466
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
AR++FD ER+V W ++I YA+ + L LF+++ R+ D + +E
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
D + R IH G Q +A++ Y+ G+I EA ++F +P
Sbjct: 119 SFDTKGLRCIHGIAIVSGLGFDQ----ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLAL 174
Query: 340 WTTMICAFAKQGYANEALAIFELMQSLG 367
W MI + G+ ++ + +F LMQ G
Sbjct: 175 WNVMILGYGCCGFWDKGINLFNLMQHRG 202
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 92/160 (57%), Gaps = 4/160 (2%)
Query: 210 VYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
+Y +C + AR++FD+M ERN++++ ++I+GY + G QA+ LF + R A++ LD+ +
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
AL C E DL LG +H + ++G SQ + L N LI MY+ CG +++A +F
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLV--VVNGLSQQVF--LINVLIDMYSKCGKLDQAMSLF 206
Query: 330 RWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
+R +SW ++I + + G A E L + M G N
Sbjct: 207 DRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLN 246
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 140/321 (43%), Gaps = 45/321 (14%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHAR--- 109
IH G + LL Y +G L A K+F + + +V +N MI G +
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 110 --SESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
E+ ++ LF M+ EP+ T+S +L C+ + L G Q+H + N + +
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE 393
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
F+ + LI LY + G+ E + F +++I W SM+ +++ +E A FD
Sbjct: 394 FIGSALIELYALMGS---TEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESA---FD-- 445
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
LF ++ +H+ ++ ++ +SACA+ L G
Sbjct: 446 --------------------------LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 288 WIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICA 346
I Y I+ + S+ + I MYA G + A +VF + +++ MI +
Sbjct: 480 QIQGYAIKSGIDA-----FTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISS 534
Query: 347 FAKQGYANEALAIFELMQSLG 367
A+ G ANEAL IFE M++ G
Sbjct: 535 LAQHGSANEALNIFESMKTHG 555
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 85 AHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCAR 144
A ++F + ++ +N +I G+ + +++ LF + R A + + TY+ L C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 145 SGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCW 204
L GE +HG V+VNG VF+ LI++Y G ++ A +FD ER+ V W
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGK---LDQAMSLFDRCDERDQVSW 217
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
NS+++ Y+R G E + L L KM R ++
Sbjct: 218 NSLISGYVRVGAAE-------------------------------EPLNLLAKMHRDGLN 246
Query: 265 LDQVSLVAALSACA---ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV 321
L +L + L AC G + G IH Y KL I + AL+ MYA G
Sbjct: 247 LTTYALGSVLKACCINLNEGFIEKGMAIHCYT-AKL---GMEFDIVVRTALLDMYAKNGS 302
Query: 322 IEEAYEVFRWMPKRSNISWTTMICAFAKQG-----YANEALAIFELMQSLG 367
++EA ++F MP ++ +++ MI F + ++EA +F MQ G
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG 353
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 37/245 (15%)
Query: 40 LLQSC---KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L++C KTL+Y QIH I + F +I + L+ Y G + F
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQD 423
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ W MI H ++E + LF Q+ ++ P T S ++S CA L GEQ+ G
Sbjct: 424 IASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQG 483
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
+ +G +KT+ I++Y +G N
Sbjct: 484 YAIKSGIDAFTSVKTSSISMYAKSG----------------------------------N 509
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
+ A ++F ++ +V T++ MI+ A++G +AL +F M+ + +Q + + L A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 277 CAELG 281
C G
Sbjct: 570 CCHGG 574
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 103/167 (61%), Gaps = 5/167 (2%)
Query: 206 SMLAVYMRCGNVEGARRIFDKMMER-NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
S++ Y G+V+ AR++FD+ E+ N+V WT MI+ Y N +A+ LF +M ++
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
LD V + ALSACA+LG +++G I++ I+ K + ++ ++L N+L++MY G E
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRK---RRLAMDLTLRNSLLNMYVKSGETE 221
Query: 324 EAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANE 370
+A ++F ++ ++T+MI +A G A E+L +F+ M+++ ++
Sbjct: 222 KARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQ 268
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 142/318 (44%), Gaps = 63/318 (19%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV-KNPSVTLWNQMIRGHARS 110
QIH + GF+ I L+ FY + G + A +VF E + ++ LW MI + +
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTEN 145
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNG--YYPNVF 168
E+ +++ LF +M A + E + + + LS CA G ++ GE+++ R + ++
Sbjct: 146 ENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLT 205
Query: 169 MKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
++ +L+N+Y +G E A+++FDE +++ + S
Sbjct: 206 LRNSLLNMYVKSGE---TEKARKLFDESMRKDVTTYTS---------------------- 240
Query: 229 ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD------QVSLVAALSACAELGD 282
MI GYA NG+ +++L LF KM+ D V+ + L AC+
Sbjct: 241 ---------MIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS---- 287
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLN--------NALIHMYASCGVIEEAYEVFRWMPK 334
H+ + E+ +S+++ N ++ ++ G +++A+E MP
Sbjct: 288 -------HSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPI 340
Query: 335 RSN-ISWTTMICAFAKQG 351
+ N + W T++ A + G
Sbjct: 341 KPNTVIWRTLLGACSLHG 358
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE-- 129
LL+ Y+ SG A K+F E VT + MI G+A + ++S+ LF +M+ +
Sbjct: 210 LLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD 269
Query: 130 ----PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY--YPNVFMKTNLINLYGMAGAD 183
PN +T+ +L C+ SGL+ EG++ H + ++ Y P +++L+ +G
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDYNLKPREAHFGCMVDLFCRSGH- 327
Query: 184 FGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGA----RRIFDKMMERN-VVTWTT 237
++ A ++M + N V W ++L GNVE RRIF+ ++R+ V +
Sbjct: 328 --LKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE--LDRDHVGDYVA 383
Query: 238 MIAGYARNGKCRQALILFNKMRR 260
+ YA G + + +++R+
Sbjct: 384 LSNIYASKGMWDEKSKMRDRVRK 406
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 150/315 (47%), Gaps = 39/315 (12%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
L + + L Q+H+++V GF+ + L++ Y G +L A +VF + ++ L
Sbjct: 246 LFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFL 305
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
++ + + +S +++ LF++M E PN T++ LL+ A LL++G+ +HG VL
Sbjct: 306 NTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL 365
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
+GY +V + L+N+Y +G+ +E A++ F M R+IV WN
Sbjct: 366 KSGYRNHVMVGNALVNMYAKSGS---IEDARKAFSGMTFRDIVTWN-------------- 408
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
TMI+G + +G R+AL F++M ++++ + L AC+
Sbjct: 409 -----------------TMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSH 451
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-I 338
+G + G + +K + I ++ + + G+ ++A + R P + +
Sbjct: 452 IGFVEQGLHYFNQLMKKFDVQPD---IQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVV 508
Query: 339 SWTTMICA-FAKQGY 352
+W T++ A + ++ Y
Sbjct: 509 AWRTLLNACYVRRNY 523
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 5/234 (2%)
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYG-MAGADFGVEYA 189
+L +S LSG G +EG V + + N + + L+ + + ++
Sbjct: 201 DLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVH 260
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
R+ + +++ +Y +CG V A+R+FD +N+ TT++ Y ++
Sbjct: 261 SRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE 320
Query: 250 QALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN 309
+AL LF+KM V ++ + L++ AEL L+ G +H + + SG +++
Sbjct: 321 EALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK--SGYRNHVMVG-- 376
Query: 310 NALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELM 363
NAL++MYA G IE+A + F M R ++W TMI + G EAL F+ M
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 148/355 (41%), Gaps = 47/355 (13%)
Query: 18 LEELIPANTITTSRILQQHLFHLLQSCKTLKYL---SQIHTQIVIHGFS---QKSYILAK 71
L L+P + T I L LL+ C YL IH +++ S + +Y +
Sbjct: 17 LASLVPKSKKTPFPI--DRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINS 74
Query: 72 LLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMR-AAEAEP 130
L++ Y+ + A K+F + +V W M++G+ S + + LF M + E+ P
Sbjct: 75 LINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRP 134
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
N + + C+ SG + EG+Q HG L G + F++ L+ +Y + G A
Sbjct: 135 NEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCS---GNGEAI 191
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQ 250
RV D++ ++ ++S L+ Y+ CG + + K + V W +
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNL------------ 238
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
+ +++L + L DL L +H+ ++ + +
Sbjct: 239 ------------------TYLSSLRLFSNLRDLNLALQVHS----RMVRFGFNAEVEACG 276
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
ALI+MY CG + A VF ++ TT++ A+ + EAL +F M +
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT 331
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 254 LFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY--IEEKLSGKSQSLLISLNNA 311
L K ++ +D+++ + L CA LR+G IH + + + S + I N+
Sbjct: 20 LVPKSKKTPFPIDRLNEL--LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQI---NS 74
Query: 312 LIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLGANEA 371
LI++Y C A ++F MP+R+ +SW M+ + G+ E L +F+ M + E+
Sbjct: 75 LINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM--FFSGES 132
Query: 372 KP 373
+P
Sbjct: 133 RP 134
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 147/316 (46%), Gaps = 40/316 (12%)
Query: 50 LSQIHTQIVIHG-FSQKSYILAKLL-SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGH 107
L + + ++G +K+Y+ + +L + Y+ +G L++A KVF E+ + +T WN MI G
Sbjct: 7 LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGL 66
Query: 108 ARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
+ E + + LF +M P+ T + SG A + G+Q+HG + G ++
Sbjct: 67 IQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDL 126
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
+ ++L ++Y G ++ + V M RN+V WN
Sbjct: 127 VVNSSLAHMYMRNGK---LQDGEIVIRSMPVRNLVAWN---------------------- 161
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
T+I G A+NG L L+ M+ + ++++ V LS+C++L G+
Sbjct: 162 ---------TLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 212
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
IH + S ++++ ++LI MY+ CG + +A + F + W++MI A+
Sbjct: 213 QIHA----EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 348 AKQGYANEALAIFELM 363
G +EA+ +F M
Sbjct: 269 GFHGQGDEAIELFNTM 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKC 248
A V+ M ++N + N ++ Y+R G++ AR++FD+M +R + TW MIAG +
Sbjct: 13 AVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFN 72
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLIS 307
+ L LF +M D+ +L + S A L + +G+ IH Y I+ L L +
Sbjct: 73 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL-----ELDLV 127
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+N++L HMY G +++ V R MP R+ ++W T+I A+ G L ++++M+ G
Sbjct: 128 VNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 187
Query: 368 ANEAK 372
K
Sbjct: 188 CRPNK 192
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 142/322 (44%), Gaps = 39/322 (12%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
QIH + +G + + L Y+ +G L V + + ++ WN +I G+A++
Sbjct: 112 QIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG 171
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
P + L+ M+ + PN +T+ +LS C+ + +G+Q+H + G V + +
Sbjct: 172 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 231
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+LI++Y G + A + F E + + V W+SM
Sbjct: 232 SLISMYSKCGC---LGDAAKAFSEREDEDEVMWSSM------------------------ 264
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
I+ Y +G+ +A+ LFN M + ++++++V+ + L AC+ G G +
Sbjct: 265 -------ISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 317
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMICAFAK 349
+ EK K + ++ + G +++A + R MP +++I W T++ A
Sbjct: 318 DMMVEKYGFKPG---LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 350 QGYANEALAIFELMQSLGANEA 371
A A +F+ + + N++
Sbjct: 375 HKNAEMAQRVFKEILQIDPNDS 396
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L SC L Q IH + + G S +++ L+S Y G L A K F E ++
Sbjct: 198 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 257
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+W+ MI + +++ LFN M E N + + LL C+ SGL +G ++
Sbjct: 258 EVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 317
Query: 156 GRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMR 213
++ G+ P + T +++L G AG ++ A+ + M + +IV W ++L+
Sbjct: 318 DMMVEKYGFKPGLKHYTCVVDLLGRAGC---LDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 214 CGNVEGARRIFDKMME 229
N E A+R+F ++++
Sbjct: 375 HKNAEMAQRVFKEILQ 390
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 118/220 (53%), Gaps = 14/220 (6%)
Query: 148 LREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSM 207
L++G H R + +G L+NLY +G + A+ VFDEM ERN+ WN++
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGL---LREARNVFDEMLERNVYSWNAV 60
Query: 208 LAVYMRCGNVEGARRIFD-KMMERNVVTWTTMIAGYARNGKCR-QALILFNKMRRAHVD- 264
+A Y++ NV+ AR +F+ ER+++T+ T+++G+A+ C +A+ +F +M R D
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 265 --LDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVI 322
+D ++ + A+L ++ G +H + K +S +LIHMY+ CG
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVL-VKTGNDGTKFAVS---SLIHMYSKCGKF 176
Query: 323 EEAYEVFRW--MPKRSNISWTTMICAFAKQGYANEALAIF 360
+E +F + +++ MI A+ ++G ++AL++F
Sbjct: 177 KEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVF 216
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 151/336 (44%), Gaps = 17/336 (5%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
L H+ C K + I + S +++ Y G + A VF +NP
Sbjct: 166 LIHMYSKCGKFKEVCNIFNGSCVEFVD--SVARNAMIAAYCREGDIDKALSVF--WRNPE 221
Query: 97 VT---LWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+ WN +I G+A++ +++ + M + + ++ +L+ + L+ G++
Sbjct: 222 LNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKE 281
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
VH RVL NG Y N F+ + ++++Y G ++YA+ G N+ +SM+ Y
Sbjct: 282 VHARVLKNGSYSNKFVSSGIVDVYCKCG---NMKYAESAHLLYGFGNLYSASSMIVGYSS 338
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL-DQVSLVA 272
G + A+R+FD + E+N+V WT M GY + L L + D + +V+
Sbjct: 339 QGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVS 398
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS-LNNALIHMYASCGVIEEAYEVFRW 331
L AC+ + G+ IH + S ++ L+ L A + MY+ CG +E A +F
Sbjct: 399 VLGACSLQAYMEPGKEIHGH-----SLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS 453
Query: 332 MPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+R + + MI A G+ ++ FE M G
Sbjct: 454 SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGG 489
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 164/373 (43%), Gaps = 66/373 (17%)
Query: 31 RILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
+ L+ H ++S K+ L+ + + +L++ Y SG L A VF
Sbjct: 2 KCLKDGFLHHIRSIKSGSTLTAVSSN--------------QLVNLYSKSGLLREARNVFD 47
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARS-GLLR 149
E+ +V WN +I + + + +++ LF + E +L+TY+ LLSG A++ G
Sbjct: 48 EMLERNVYSWNAVIAAYVKFNNVKEARELF---ESDNCERDLITYNTLLSGFAKTDGCES 104
Query: 150 E--------------------------------------GEQVHGRVLVNGYYPNVFMKT 171
E GEQ+HG ++ G F +
Sbjct: 105 EAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVS 164
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGER--NIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
+LI++Y G + +F+ + V N+M+A Y R G+++ A +F + E
Sbjct: 165 SLIHMYSKCGK---FKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPE 221
Query: 230 RN-VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
N ++W T+IAGYA+NG +AL + M + D+ S A L+ + L L++G+
Sbjct: 222 LNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKE 281
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFA 348
+H + + +G + +S + ++ +Y CG ++ A + S ++MI ++
Sbjct: 282 VHARVLK--NGSYSNKFVS--SGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYS 337
Query: 349 KQGYANEALAIFE 361
QG EA +F+
Sbjct: 338 SQGKMVEAKRLFD 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 39/258 (15%)
Query: 25 NTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLS 84
N +++ + + + C +KY H +++GF Y + ++ Y + G ++
Sbjct: 289 NGSYSNKFVSSGIVDVYCKCGNMKYAESAH---LLYGFGNL-YSASSMIVGYSSQGKMVE 344
Query: 85 AHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE-PNLLTYSFLLSGCA 143
A ++F + ++ +W M G+ P + L A E P+ L +L C+
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACS 404
Query: 144 RSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVC 203
+ G+++HG L G + M L+ +
Sbjct: 405 LQAYMEPGKEIHGHSLRTG----ILMDKKLVTAF-------------------------- 434
Query: 204 WNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
+ +Y +CGNVE A RIFD ER+ V + MIAG A +G ++ F M
Sbjct: 435 ----VDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGF 490
Query: 264 DLDQVSLVAALSACAELG 281
D+++ +A LSAC G
Sbjct: 491 KPDEITFMALLSACRHRG 508
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 138/291 (47%), Gaps = 37/291 (12%)
Query: 77 IASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
I SG+LLSAH+ F E+ V +N +I G++R +++ L+ +M + + T+
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
+LS C+ REG QVH RV+ G+ N+F+++ L+ LY V+ A ++FDEM
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRL---VDVALKLFDEM 173
Query: 197 GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFN 256
+RN+ N +L + + G ++R+F+ V + G A+NG
Sbjct: 174 LDRNLAVCNLLLRCFCQTGE---SKRLFE-------VYLRMELEGVAKNG---------- 213
Query: 257 KMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMY 316
++ + C+ + G+ +H+ + + S I + N L+ Y
Sbjct: 214 -----------LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISN---IFVANVLVDYY 259
Query: 317 ASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
++CG + + F +P++ ISW +++ A G ++L +F MQ G
Sbjct: 260 SACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWG 310
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 150/318 (47%), Gaps = 38/318 (11%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
Q+H +++ GF ++ + L+ Y + A K+F E+ + ++ + N ++R ++
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY-YPNVFMK 170
++ ++ +M N LTY +++ GC+ L+ EG+Q+H V+ +G+ N+F+
Sbjct: 193 ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVA 252
Query: 171 TNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
L++ Y G G + R F+ + E++++ WNS+++V G+V + +F KM
Sbjct: 253 NVLVDYYSACGDLSG---SMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ-- 307
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
W GK R ++ F ++ L+ C+ D++ G+ IH
Sbjct: 308 ---FW----------GK-RPSIRPF---------------MSFLNFCSRNSDIQSGKQIH 338
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQ 350
Y+ K+ SL + +ALI MY C IE + +++ +P + +++ +
Sbjct: 339 CYV-LKMGFDVSSLHV--QSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHC 395
Query: 351 GYANEALAIFELMQSLGA 368
G + + +F LM G
Sbjct: 396 GITKDIIEMFGLMIDEGT 413
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 141/321 (43%), Gaps = 46/321 (14%)
Query: 52 QIHTQIVIHGFSQKSYILAKLL-SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARS 110
Q+H+ +V G++ + +A +L +Y A G L + + F V V WN ++ A
Sbjct: 234 QLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADY 293
Query: 111 ESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY-YPNVFM 169
S S+ LF++M+ P++ + L+ C+R+ ++ G+Q+H VL G+ ++ +
Sbjct: 294 GSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHV 353
Query: 170 KTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMME 229
++ LI++YG G+E + ++ + N+ C NS++ M CG + +F M++
Sbjct: 354 QSALIDMYGKCN---GIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 230 RNV----VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRL 285
VT +T++ + +SL +L +C
Sbjct: 411 EGTGIDEVTLSTVLKALS------------------------LSLPESLHSCT------- 439
Query: 286 GRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMIC 345
+H + SG + + +S +LI Y G E + +VF + + T++I
Sbjct: 440 --LVHCCAIK--SGYAADVAVSC--SLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIIN 493
Query: 346 AFAKQGYANEALAIFELMQSL 366
+A+ G + + + M +
Sbjct: 494 GYARNGMGTDCVKMLREMDRM 514
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
+ ++++E + +T S +L+ L +S L + +H + G++ + L+
Sbjct: 405 FGLMIDEGTGIDEVTLSTVLKALSLSLPES---LHSCTLVHCCAIKSGYAADVAVSCSLI 461
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y SG + KVF E+ P++ +I G+AR+ V + +M P+ +
Sbjct: 462 DAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEV 521
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQR- 191
T +LSGC+ SGL+ EGE + + G P + +++L G AG VE A+R
Sbjct: 522 TILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGL---VEKAERL 578
Query: 192 VFDEMGERNIVCWNSML 208
+ G+ + V W+S+L
Sbjct: 579 LLQARGDADCVAWSSLL 595
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
S++ Y + G E +R++FD++ N+ T++I GYARNG + + +M R ++
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIP 518
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
D+V++++ LS C+ G + G I +E K L + ++ + G++E+A
Sbjct: 519 DEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYA---CMVDLLGRAGLVEKA 575
Query: 326 YEVFRWMPKRSN-ISWTTMI 344
+ ++ ++W++++
Sbjct: 576 ERLLLQARGDADCVAWSSLL 595
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 144/324 (44%), Gaps = 46/324 (14%)
Query: 54 HTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHAR 109
+ +I+ GF Y+ L++ + G++ A KVF E+ P+V +N +I G+ +
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 110 SESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFM 169
+ + L +QM + P++ TYS L++ + + + + G PN +
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 170 KTNLINLYGMAGA-DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMM 228
T LI+ + G D E Q++ + + +IV +N+++ + + G++ AR I D M+
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 229 ERNV----VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA-CAELGDL 283
R + +T+TT+I G+ R G AL + +M + ++LD+V A + C E
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE---- 463
Query: 284 RLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTM 343
GR I E L E+ R K ++++T M
Sbjct: 464 --GRVIDA--ERALR----------------------------EMLRAGIKPDDVTYTMM 491
Query: 344 ICAFAKQGYANEALAIFELMQSLG 367
+ AF K+G A + + MQS G
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDG 515
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 143/336 (42%), Gaps = 49/336 (14%)
Query: 37 LFHLLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +LL C ++SQ +H G S + L+SFY L SA +F+E+K
Sbjct: 44 LVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMK 103
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+ S WN MI +++S +++ +F M E + +T LLS E
Sbjct: 104 DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH------EP 157
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
+H V+ K ++N +I S++ Y R
Sbjct: 158 LHCLVV----------KCGMVN------------------------DISVVTSLVCAYSR 183
Query: 214 CGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAA 273
CG + A R++ + ++V T++++ YA G A++ F+K R+ + +D V+LV
Sbjct: 184 CGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGI 243
Query: 274 LSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
L C + + +G +H Y I+ L K+ + N LI MY+ +E +F +
Sbjct: 244 LHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV-----NGLITMYSKFDDVETVLFLFEQL 298
Query: 333 PKRSNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
+ ISW ++I + G A+ A +F M G
Sbjct: 299 QETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGG 334
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 154/355 (43%), Gaps = 50/355 (14%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
++ + E+ + + +T +L H+ H +H +V G ++ L+
Sbjct: 130 FKNMFEKNVEISPVTIINLLSAHVSH-----------EPLHCLVVKCGMVNDISVVTSLV 178
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y G L+SA +++ K S+ ++ +A +V+ F++ R + + +
Sbjct: 179 CAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAV 238
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
+L GC +S + G +HG + +G + LI +Y F
Sbjct: 239 ALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSK-------------F 285
Query: 194 DEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALI 253
D+ VE +F+++ E +++W ++I+G ++G+ A
Sbjct: 286 DD---------------------VETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFE 324
Query: 254 LFNKMRRAHVDL-DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
+F++M L D +++ + L+ C++L L LG+ +H Y + ++++ + + AL
Sbjct: 325 VFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRN-NFENENFVCT---AL 380
Query: 313 IHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
I MYA CG +A VF+ + +W +MI ++ G + AL+ + M+ G
Sbjct: 381 IDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG 435
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 37 LFHLLQSCKTLKYLS---QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK 93
L +L CK ++ +H + G K+ ++ L++ Y + + +F++++
Sbjct: 240 LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 299
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAE-PNLLTYSFLLSGCARSGLLREGE 152
+ WN +I G +S + +F+QM P+ +T + LL+GC++ L G+
Sbjct: 300 ETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGK 359
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
++HG L N + F+ T LI++Y
Sbjct: 360 ELHGYTLRNNFENENFVCTALIDMYA---------------------------------- 385
Query: 213 RCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
+CGN A +F + TW +MI+GY+ +G +AL + +MR + D+++ +
Sbjct: 386 KCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLG 445
Query: 273 ALSACAELGDLRLGR 287
LSAC G + G+
Sbjct: 446 VLSACNHGGFVDEGK 460
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 6/138 (4%)
Query: 227 MMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
M ER+ V W +I GY+RNG A LF M + +LV L C + G + G
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 287 RWIHTYIEEKLSGKSQSLLIS-LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMIC 345
R +H ++ KS L S + NALI Y+ C + A +FR M +S +SW TMI
Sbjct: 61 RSVH-----GVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIG 115
Query: 346 AFAKQGYANEALAIFELM 363
A+++ G EA+ +F+ M
Sbjct: 116 AYSQSGLQEEAITVFKNM 133
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 10 FQSSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLS---QIHTQIVIHGFSQKS 66
F+ +QM+L + + IT + LL C L L+ ++H + + F ++
Sbjct: 323 FEVFHQMMLTGGLLPDAITIAS--------LLAGCSQLCCLNLGKELHGYTLRNNFENEN 374
Query: 67 YILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAA 126
++ L+ Y G+ + A VFK +K P WN MI G++ S +++ + +MR
Sbjct: 375 FVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREK 434
Query: 127 EAEPNLLTYSFLLSGCARSGLLREGE 152
+P+ +T+ +LS C G + EG+
Sbjct: 435 GLKPDEITFLGVLSACNHGGFVDEGK 460
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
E + + ++ L+ G +R+G + ++ +L G+ P+ NL+ G G
Sbjct: 3 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 62
Query: 189 AQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
V + G E + N++++ Y +C + A +F +M +++ V+W TMI Y+++G
Sbjct: 63 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 122
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
+A+ +F M +V++ V+++ LSA L H + + G IS
Sbjct: 123 QEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVK--CGMVND--IS 172
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSL 366
+ +L+ Y+ CG + A ++ + S + T+++ +A++G + A+ F + L
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL 231
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 143/305 (46%), Gaps = 31/305 (10%)
Query: 84 SAHKVFKEVKN----PSVTLWNQMIR---GHAR-SESPRKSVILFNQMRAAEAEPNLLTY 135
A +F E+ N P+V +N +IR + R S++ R L + M + PN++T+
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR----LLSDMIERKINPNVVTF 328
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
S L+ + G L E E+++ ++ P++F ++LIN + M ++ A+ +F+
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR---LDEAKHMFEL 385
Query: 196 MGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGK 247
M + N+V +N+++ + + VE +F +M +R N VT+ T+I G + G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
C A +F KM V D ++ L + G L + Y+++ I
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK----SKMEPDIY 501
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELM 363
N +I G +E+ +++F + K + I +TTMI F ++G EA A+F M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 364 QSLGA 368
+ G
Sbjct: 562 KEDGT 566
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 136/325 (41%), Gaps = 48/325 (14%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K+ K P + + ++ G+ + ++V L +QM E +PN +T++ L+ G
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLIN------------------LYGMAGADF---- 184
E + R++ G P++F ++N G AD
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 185 ----------GVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
V A +F EM + N+V +NS++ G A R+ M+ER
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 231 ----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
NVVT++ +I + + GK +A L+++M + +D D + + ++ + D RL
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-MHD-RLD 377
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTT 342
H + E + K + N LI + +EE E+FR M +R + +++ T
Sbjct: 378 EAKHMF--ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 343 MICAFAKQGYANEALAIFELMQSLG 367
+I + G + A IF+ M S G
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 40/237 (16%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P+V +N +I+G +++ + + LF +M N +TY+ L+ G ++G +++
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 155 HGRVLVNGYYPNVFMKTNLIN---LYG-MAGADFGVEYAQRVFDEMGERNIVCWNSMLAV 210
+++ +G P++ + L++ YG + A EY Q+ E +I +N M+
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK---SKMEPDIYTYNIMIEG 509
Query: 211 YMRCGNVEGARRIFD----KMMERNVVTWTTMIAGYARNGKCRQALILFNKMR------- 259
+ G VE +F K ++ NV+ +TTMI+G+ R G +A LF +M+
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 260 --------RAHV-DLDQVS---LVAALSACAELGD----------LRLGRWIHTYIE 294
RA + D D+ + L+ + +C +GD L GR +Y+E
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 79 SGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
+G A K+FK++ + P + ++ ++ G + K++++F ++ ++ EP++ T
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
Y+ ++ G ++G + +G + + + G PNV + T +I+ + G E A +F
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK---EEADALFR 559
Query: 195 EMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKM 227
EM E N +N+++ +R G+ + + +M
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 131/319 (41%), Gaps = 56/319 (17%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ +N+++ A+ + L +M+ +L +Y+ L++ R L V
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG----ERNIVCWNSMLAV 210
G+++ GY P++ ++L+N Y + A + D+M + N V +N+++
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKR---ISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 211 YMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
A + D+M+ R ++ T+ T++ G + G AL L KM + ++ D
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 267 QV---SLVAALSACAELGD---------------------------LRLGRW------IH 290
V +++ AL + D GRW +
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS----NISWTTMICA 346
IE K++ + +ALI + G + EA +++ M KRS +++++I
Sbjct: 315 DMIERKINPNVVTF-----SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Query: 347 FAKQGYANEALAIFELMQS 365
F +EA +FELM S
Sbjct: 370 FCMHDRLDEAKHMFELMIS 388
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 158/323 (48%), Gaps = 11/323 (3%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL 99
LL TL + +H Q++ GF + +Y + L Y SG +++A ++F ++ + +
Sbjct: 15 LLSKSPTLAKI--VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTIT 72
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
WN ++G ++ ++ LF++M E ++++++ ++SG G G +V +
Sbjct: 73 WNVCLKGLFKNGYLNNALDLFDEM----PERDVVSWNTMISGLVSCGFHEYGIRVFFDMQ 128
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
P F + L +L + + + + N+V WNS++ +Y R G +
Sbjct: 129 RWEIRPTEFTFSILASLVTCVRHGEQI-HGNAICSGVSRYNLVVWNSVMDMYRRLGVFDY 187
Query: 220 ARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE 279
A +F M +R+VV+W +I + +G AL F MR + D+ ++ +S C++
Sbjct: 188 ALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSD 247
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
L +L G+ + K+ S S+++ A I M++ C ++++ ++FR + K ++
Sbjct: 248 LRELSKGKQALA-LCIKMGFLSNSIVL---GAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 340 WTTMICAFAKQGYANEALAIFEL 362
+MI +++ +AL +F L
Sbjct: 304 CNSMIGSYSWHCCGEDALRLFIL 326
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 16/246 (6%)
Query: 130 PNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA 189
P+ L +S L++ S + VH ++L G+ + + LY +G+ V A
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGS---VINA 58
Query: 190 QRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
++FD++ ++N + WN L + G + A +FD+M ER+VV+W TMI+G G
Sbjct: 59 LQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHE 118
Query: 250 QALILFNKMRRAHVDLDQV--SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
+ +F M+R + + S++A+L C +R G IH SG S+ L+
Sbjct: 119 YGIRVFFDMQRWEIRPTEFTFSILASLVTC-----VRHGEQIHG--NAICSGVSRYNLV- 170
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ N+++ MY GV + A VF M R +SW +I + + G AL F LM+ +
Sbjct: 171 VWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREM- 229
Query: 368 ANEAKP 373
E +P
Sbjct: 230 --EIQP 233
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 132/312 (42%), Gaps = 51/312 (16%)
Query: 44 CKTLKYLSQIHTQIVI---HGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLW 100
C L+ LS+ + + GF S +L + + L + K+F+E++ L
Sbjct: 245 CSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC 304
Query: 101 NQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLV 160
N MI ++ ++ LF P+ T+S +LS + +L G VH V+
Sbjct: 305 NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIK 363
Query: 161 NGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGA 220
G+ + + T S++ +Y + G+V+ A
Sbjct: 364 LGFDLDTAVAT----------------------------------SLMEMYFKTGSVDLA 389
Query: 221 RRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNK-MRRAHVDLDQVSLVAALSACAE 279
+F K ++++ W T+I G ARN + ++L +FN+ + + D+V+L+ L AC
Sbjct: 390 MGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCY 449
Query: 280 LGDLRLGRWIHTYIEEKLSGKSQSLLISLNN----ALIHMYASCGVIEEAYEVFRWMP-K 334
G + G I + + EK G ++ N +I + G+I EA ++ +P +
Sbjct: 450 AGFVNEGIQIFSSM-EKAHG------VNPGNEHYACIIELLCRVGMINEAKDIADKIPFE 502
Query: 335 RSNISWTTMICA 346
S+ W ++CA
Sbjct: 503 PSSHIWEPILCA 514
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 18/192 (9%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRG 106
L + + +H+ ++ GF + + L+ Y +G + A VF + + WN +I G
Sbjct: 351 LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMG 410
Query: 107 HARSESPRKSVILFNQMRAAEA-EPNLLTYSFLLSGCARSGLLREG-------EQVHGRV 158
AR+ +S+ +FNQ+ ++ +P+ +T +L C +G + EG E+ HG
Sbjct: 411 LARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVN 470
Query: 159 LVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNV 217
N +Y + L+ GM + A+ + D++ E + W +L + G+
Sbjct: 471 PGNEHYACII---ELLCRVGM------INEAKDIADKIPFEPSSHIWEPILCASLDLGDT 521
Query: 218 EGARRIFDKMME 229
A + M+E
Sbjct: 522 RLAETVAKTMLE 533
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 155/327 (47%), Gaps = 28/327 (8%)
Query: 60 HGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESP-R 114
GFS Y L+S + SG A VFK+++ P++ +N ++ + +P
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 115 KSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLI 174
K L +M++ P+ TY+ L++ C R L +E QV + G+ + L+
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 175 NLYGMAGADFGVEYAQRVFDEM----GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
++YG + + A +V +EM +IV +NS+++ Y R G ++ A + ++M E+
Sbjct: 322 DVYGKSHRP---KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 231 ----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
+V T+TT+++G+ R GK A+ +F +MR A + + A + G +
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG--KFT 436
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM------PKRSNISW 340
+ + E + G S ++ N L+ ++ G+ E VF+ M P+R ++
Sbjct: 437 EMMKIFDEINVCGLSPDIVTW--NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TF 492
Query: 341 TTMICAFAKQGYANEALAIFELMQSLG 367
T+I A+++ G +A+ ++ M G
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAG 519
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 62/299 (20%)
Query: 85 AHKVFKEVKNPSVT----LWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLS 140
A +VF+E+K + +N ++ + +S P++++ + N+M P+++TY+ L+S
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 141 GCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG--- 197
AR G+L E ++ ++ G P+VF T L++ + AG VE A +F+EM
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK---VESAMSIFEEMRNAG 414
Query: 198 -ERNIVCWNSMLAVYMRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQAL 252
+ NI +N+ + +Y G +IFD++ + ++VTW T++A + +NG +
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 253 ILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
+F +M+RA ++ E+ + N L
Sbjct: 475 GVFKEMKRA-----------------------------GFVPERETF----------NTL 495
Query: 313 IHMYASCGVIEEAYEVFRWM------PKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
I Y+ CG E+A V+R M P S ++ T++ A A+ G ++ + M+
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLS--TYNTVLAALARGGMWEQSEKVLAEMED 552
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 135/328 (41%), Gaps = 50/328 (15%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSE 111
++ Q+ G + LLS + +G + SA +F+E
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE-------------------- 409
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
MR A +PN+ T++ + G E ++ + V G P++
Sbjct: 410 -----------MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIV----CWNSMLAVYMRCGNVEGA----RRI 223
L+ ++G G D V VF EM V +N++++ Y RCG+ E A RR+
Sbjct: 459 TLLAVFGQNGMDSEV---SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 224 FDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDL 283
D + ++ T+ T++A AR G Q+ + +M ++++ + L A A ++
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 284 RLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNIS 339
L +H+ EE SG + + L L+ + + C ++ EA F + +R +
Sbjct: 576 GL---MHSLAEEVYSGVIEPRAVLL-KTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 340 WTTMICAFAKQGYANEALAIFELMQSLG 367
+M+ + ++ +A + + M+ G
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERG 659
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 150/405 (37%), Gaps = 124/405 (30%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGH 107
+I +I + G S LL+ + +G VFKE+K P +N +I +
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 108 ARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
+R S +++ ++ +M A P+L TY+ +L+ AR G+ + E+V + PN
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 168 FMKTNLINLYGMAGADFGVEY---------------------------------AQRVFD 194
+L++ Y G + G+ + A+R F
Sbjct: 560 LTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 195 EMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER-------------------- 230
E+ ER +I NSM+++Y R V A + D M ER
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 231 -------------------NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
+++++ T+I Y RN + R A +F++MR + + D +
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI--- 735
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRW 331
TY N I YA+ + EEA V R+
Sbjct: 736 -------------------TY-----------------NTFIGSYAADSMFEEAIGVVRY 759
Query: 332 MPK---RSNI-SWTTMICAFAKQGYANEALAIFELMQSLGANEAK 372
M K R N ++ +++ + K +EA E +++L + K
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPK 804
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 136/341 (39%), Gaps = 67/341 (19%)
Query: 40 LLQSCKTLKYLSQ---IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
LLQ CK K ++ IH Q+ + GF+ Y+ KLL Y S
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS----------------D 157
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
+ WN MI G+ + ++ + ++ MR P+ T++ + C+ L G++ H
Sbjct: 158 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 217
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGN 216
++ N+ + + L+++ Y +C +
Sbjct: 218 VMIKRCIKSNIIVDSALVDM----------------------------------YFKCSS 243
Query: 217 VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA 276
R+FD++ RNV+TWT++I+GY +GK + L F KM+ + V+ + L+A
Sbjct: 244 FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 303
Query: 277 CAELGDLRLGRWIHTYIEEKLSG---KSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
C G + G W H Y ++ G + Q A++ G ++EAYE P
Sbjct: 304 CNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYA-----AMVDTLGRAGRLQEAYEFVMKSP 357
Query: 334 -KRSNISWTTMICAFAKQGYAN----EALAIFELMQSLGAN 369
K W +++ A G A EL + G N
Sbjct: 358 CKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGN 398
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 94/257 (36%), Gaps = 12/257 (4%)
Query: 14 YQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLL 73
Y M ++P S +F + L++ + H ++ + + L+
Sbjct: 182 YDMRQNRIVPDQYTFAS------VFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALV 235
Query: 74 SFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
Y H+VF ++ +V W +I G+ + + F +M+ PN +
Sbjct: 236 DMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPV 295
Query: 134 TYSFLLSGCARSGLLREG-EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
T+ +L+ C GL+ +G E + G P +++ G AG E + V
Sbjct: 296 TFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL--QEAYEFV 353
Query: 193 FDEMGERNIVCWNSMLAVYMRCGNV---EGARRIFDKMMERNVVTWTTMIAGYARNGKCR 249
+ + W S+L GNV E A F ++ N + GYA G
Sbjct: 354 MKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLRE 413
Query: 250 QALILFNKMRRAHVDLD 266
A + KM A V D
Sbjct: 414 AASKVRRKMENAGVKKD 430
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 147/345 (42%), Gaps = 28/345 (8%)
Query: 41 LQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PS 96
L K + ++V +G ++ +S YI + SA K KE++ P+
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
L +I + + ++ + M + TY+ L++G ++ + + E++
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 157 RVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYM 212
+ G P+VF LIN + G ++ A +FDEM E N++ +N +L +
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLG---NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 213 RCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
R G +E A+ + D+M + N VT+ T+I GY ++G +A LF++M+ + D
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ C L D+ R I + K S + NALI+ G E EV
Sbjct: 734 VYTTLVDGCCRLNDVE--RAITIFGTNKKGCASSTAPF---NALINWVFKFGKTELKTEV 788
Query: 329 --------FRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
F K +++++ MI K+G A +F MQ+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 153/369 (41%), Gaps = 53/369 (14%)
Query: 12 SSYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAK 71
S+Y+ ++++ I + T + +L LF + +I ++ G + +
Sbjct: 578 SAYRSMVDQGILGDAKTYT-VLMNGLFK----NDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 72 LLSFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
L++ + G++ A +F E+ P+V ++N ++ G RS K+ L ++M
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN------------ 175
PN +TY ++ G +SG L E ++ + + G P+ F+ T L++
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 176 -----------------------LYGMAGADFGVEYAQRV----FDEMGERNIVCWNSML 208
++ + E R+ FD G+ N V +N M+
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 209 AVYMRCGNVEGARRIFDKMMERN----VVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
+ GN+E A+ +F +M N V+T+T+++ GY + G+ + +F++ A ++
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Query: 265 LDQVSLVAALSACAELG-DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
D + ++A + G + + + L IS AL+ +A G +E
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932
Query: 324 EAYEVFRWM 332
A +V M
Sbjct: 933 VAEKVMENM 941
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 141/329 (42%), Gaps = 25/329 (7%)
Query: 56 QIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSE 111
++V HG + K Y+ + G + A +F + P + +I G+ R +
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+ R+ L +M+ + TY ++ G SG L + ++ +G PNV + T
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKM 227
LI + + + FG A RV EM E+ +I C+NS++ + ++ AR +M
Sbjct: 457 TLIKTF-LQNSRFG--DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 228 MER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA-CAELGD 282
+E N T+ I+GY + A +MR V ++V ++ C +
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNI 338
+ + +++ + G +++ + +N + +++A E+FR M +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKN-----DKVDDAEEIFREMRGKGIAPDVF 628
Query: 339 SWTTMICAFAKQGYANEALAIFELMQSLG 367
S+ +I F+K G +A +IF+ M G
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEG 657
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 7/163 (4%)
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQAL-ILFNKMRRAHV 263
N ++ M+ G A+++ ++NV+TW MI GY RN + +AL L N + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
++ S ++L+ACA LGDL +W+H+ + + SG + ++S +AL+ +YA CG I
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMID--SGIELNAILS--SALVDVYAKCGDIG 217
Query: 324 EAYEVFRWMPKRSNIS-WTTMICAFAKQGYANEALAIFELMQS 365
+ EVF + KR+++S W MI FA G A EA+ +F M++
Sbjct: 218 TSREVF-YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEA 259
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 41/276 (14%)
Query: 85 AHKVFKEVKNPSVTLWNQMIRGHARSESPRKSV-ILFNQMRAAEAEPNLLTYSFLLSGCA 143
A KV + + +V WN MI G+ R+ +++ L N + + +PN +++ L+ CA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 144 RSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVC 203
R G L + VH ++ +G N + + L++
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVD---------------------------- 208
Query: 204 WNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
VY +CG++ +R +F + +V W MI G+A +G +A+ +F++M HV
Sbjct: 209 ------VYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV 262
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
D ++ + L+ C+ G L G+ + + S + + + A++ + G ++
Sbjct: 263 SPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPK---LEHYGAMVDLLGRAGRVK 319
Query: 324 EAYEVFRWMPKRSNIS-WTTMICAFAKQGYANEALA 358
EAYE+ MP ++ W +++ + + Y N L
Sbjct: 320 EAYELIESMPIEPDVVIWRSLLS--SSRTYKNPELG 353
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSES 112
+H+ ++ G + + + L+ Y G + ++ +VF VK V++WN MI G A
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY---PNVFM 169
+++ +F++M A P+ +T+ LL+ C+ GLL EG++ G L++ + P +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG--LMSRRFSIQPKLEH 304
Query: 170 KTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLA 209
+++L G AG V+ A + + M E ++V W S+L+
Sbjct: 305 YGAMVDLLGRAGR---VKEAYELIESMPIEPDVVIWRSLLS 342
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 22/286 (7%)
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGL-LREGEQV 154
+V ++ +I + RS +++ +FN M+ PNL+TY+ ++ C + G+ ++ +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG----ERNIVCWNSMLAV 210
+ NG P+ +L+ + G E A+ +FDEM E+++ +N++L
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGL---WEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 211 YMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
+ G ++ A I +M + NVV+++T+I G+A+ G+ +AL LF +MR + LD
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+VS LS ++G R + E G + ++ NAL+ Y G +E
Sbjct: 444 RVSYNTLLSIYTKVG--RSEEALDILREMASVGIKKDVVTY--NALLGGYGKQGKYDEVK 499
Query: 327 EVFRWMPKRSNI-----SWTTMICAFAKQGYANEALAIFELMQSLG 367
+VF M KR ++ +++T+I ++K G EA+ IF +S G
Sbjct: 500 KVFTEM-KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 15/247 (6%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQ 102
K +++ ++ +G LL+ G +A +F E+ N V +N
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 103 MIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNG 162
++ + + + QM PN+++YS ++ G A++G E + G + G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 163 YYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG----ERNIVCWNSMLAVYMRCGNVE 218
+ L+++Y G E A + EM ++++V +N++L Y + G +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRS---EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 219 GARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
+++F +M N++T++T+I GY++ G ++A+ +F + + A + D V A +
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 275 SACAELG 281
A + G
Sbjct: 557 DALCKNG 563
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
LLS Y G A + +E+ + V +N ++ G+ + + +F +M+
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVE 187
PNLLTYS L+ G ++ GL +E ++ G +V + + LI+ G V
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL---VG 566
Query: 188 YAQRVFDEMGER----NIVCWNSMLAVYMRCGNVE 218
A + DEM + N+V +NS++ + R ++
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 134/262 (51%), Gaps = 11/262 (4%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
L+ + +L + KVFKE+ + P+V +N +I G +++ + ++M +A
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGA-DFGV 186
+PNL+TY+ L++G ++ +L+E + G V G P M LI+ Y G D G
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 187 EYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER---NVVTWTTMIAGYA 243
+ + E ++ +N ++A R GN+E A+++FD++ + ++VT+ ++ GY
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYC 481
Query: 244 RNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
R G+ R+A +L +M + + ++ + + G+L+ + T +E++ +
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE---RRLR 538
Query: 304 LLISLNNALIHMYASCGVIEEA 325
+ ++ N L+ Y+ G +E+A
Sbjct: 539 MNVASYNVLLQGYSQKGKLEDA 560
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 119 LFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYG 178
++ +M + +PN+ T++ +++ ++G + + V + V G PNV LI+ Y
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 179 MAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER---- 230
G + + A V EM E N+ +N ++ + + N+ G+ ++F +M+++
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
NV+++ ++I G GK +A+ + +KM A V + ++ A ++ + L+ +
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI----SWTTMICA 346
++ G+ + N LI Y G I++ + + M + + ++ +I
Sbjct: 390 GSVK----GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 347 FAKQGYANEALAIFELMQSLG 367
+ G A +F+ + S G
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKG 466
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 158/327 (48%), Gaps = 19/327 (5%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGH 107
++ +Q + G + + + Y+ SG L +A V+K + +P+V + +I+G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 108 ARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
+ ++ ++ Q+ EP+++TYS L+ G + G LR G ++ ++ GY P+V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 168 FMKTNLINLYGMAGADF-GVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
+ L++ G + ++ ++ + N+V +NS++ + R + A ++F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 227 M----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD 282
M ++ +V T+TT++ G+ +AL LF +M + ++ D ++ + A +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 283 LRLGRWIHTYIEE-KLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP----KRSN 337
+G + ++ K+S I++ N +IH+ C IE+A + F + +
Sbjct: 582 PTIGLQLFDLMQRNKISAD-----IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 338 ISWTTMICAFAKQGYANEALAIFELMQ 364
+++ TMIC + +EA IFEL++
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLK 663
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 23/287 (8%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P+V + +I G + ++ LF M EP+L+ YS L+ G ++G+L G ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAG--ADFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
+ L G +V + ++ I++Y +G A V Y +R+ + N+V + ++
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY-KRMLCQGISPNVVTYTILIKGLC 402
Query: 213 RCGNVEGA----RRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
+ G + A +I + ME ++VT++++I G+ + G R L+ M + D V
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 269 ---SLVAALSACAELGDLRLGRWIHTY-IEEKLSGKSQSLLISLNNALIHMYASCGVIEE 324
LV LS + G +H K+ G+S L + + N+LI + +E
Sbjct: 463 IYGVLVDGLS--------KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 325 AYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
A +VFR M K ++TT++ +G EAL +F M +G
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 119 LFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYG 178
FN + + EP+++TY+ ++ G L E E++ + V + PN T LI++
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL- 681
Query: 179 MAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER---- 230
+ ++ A R+F M E+ N V + ++ + + ++EG+ ++F++M E+
Sbjct: 682 --CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDL 283
++V+++ +I G + G+ +A +F++ A + D V+ + ++G L
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 145/305 (47%), Gaps = 31/305 (10%)
Query: 84 SAHKVFKEVKN----PSVTLWNQMIR---GHAR-SESPRKSVILFNQMRAAEAEPNLLTY 135
A +F E+ N P+V +N +IR + R S++ R L + M + PN++T+
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR----LLSDMIERKINPNVVTF 329
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
S L+ + G L E E+++ ++ P++F ++LIN + M ++ A+ +F+
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR---LDEAKHMFEL 386
Query: 196 MGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGK 247
M + N+V +N+++ + + V+ +F +M +R N VT+TT+I G+ + +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
C A I+F +M V D ++ L G + + Y++ I
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR----SKMEPDIY 502
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELM 363
N +I G +E+ +++F + K + +++TTM+ F ++G EA A+F M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 364 QSLGA 368
+ G
Sbjct: 563 KEEGP 567
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 129/325 (39%), Gaps = 68/325 (20%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ +++++ A+ + L QM+ NL TYS L++ R L V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD---------EMG-ERNIVCW 204
+++ GY P++ +L+N G + R+ D EMG + + +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLN---------GFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 205 NSMLAVYMRCGNVEGARRIFDKMM----ERNVVTWTTMIAGYARNGKCRQALILFNKMRR 260
N+++ R A + D+M+ + ++VT+ ++ G + G AL L KM +
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 261 AHVDLDQV---SLVAALSACAELGD---------------------------LRLGRW-- 288
++ V +++ AL + D GRW
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 289 ----IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS----NISW 340
+ IE K++ + +ALI + G + EA +++ M KRS ++
Sbjct: 310 ASRLLSDMIERKINPNVVTF-----SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 341 TTMICAFAKQGYANEALAIFELMQS 365
+++I F +EA +FELM S
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMIS 389
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 160/355 (45%), Gaps = 24/355 (6%)
Query: 30 SRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVF 89
S ++ H+ L + + ++S+I I + ++ Y + A VF
Sbjct: 42 SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVF 101
Query: 90 KEVKN-----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCAR 144
K ++ P++ +N ++ ++ K LF A PNL TY+ L+ +
Sbjct: 102 KRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCK 161
Query: 145 SGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----N 200
+ + G+ P+VF + +IN AG ++ A +FDEM ER +
Sbjct: 162 KKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGK---LDDALELFDEMSERGVAPD 218
Query: 201 IVCWNSMLAVYMRCGNVEGARRIFDKMMER-----NVVTWTTMIAGYARNGKCRQALILF 255
+ C+N ++ +++ + + A ++D+++E NV T MI+G ++ G+ L ++
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW 278
Query: 256 NKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHM 315
+M++ + D + + + + G++ + ++E + S+ + N ++
Sbjct: 279 ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE----RKASIDVVTYNTMLGG 334
Query: 316 YASCGVIEEAYEVFRWMPKRSN---ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ CG I+E+ E++R M +++ +S+ +I + G +EA I+ LM + G
Sbjct: 335 FCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 131/288 (45%), Gaps = 21/288 (7%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P++ +N +I+ + + K+ + M +P++ +YS +++ A++G L + ++
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER-----NIVCWNSMLA 209
+ G P+V LI+ + + D + A ++D + E N+ N M++
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGF-LKEKDH--KTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 210 VYMRCGNVEGARRIFDKMM----ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
+CG V+ +I+++M E+++ T++++I G G +A +FN++ +
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
D V+ L G ++ + +E K S+ I N LI G I+EA
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHK-----NSVNIVSYNILIKGLLENGKIDEA 378
Query: 326 YEVFRWMPKR----SNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
++R MP + ++ I GY N+AL + + ++S G +
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGH 426
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 157/341 (46%), Gaps = 32/341 (9%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGH 107
++ ++ G S+ + L++ Y +G ++ ++ +KN PS+ +N +I
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 108 ARSESPRKSVI-LFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPN 166
AR + ++ LF +MR +P+++TY+ LLS CA GL E E V + G P+
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 167 VFMKTNLINLYGMAGADFGVEYAQRVFDEMGE-------RNIVCWNSMLAVYMRCGNVEG 219
+ ++L+ +G + ++V D +GE +I +N +L Y + G+++
Sbjct: 282 LTTYSHLVETFGK------LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE 335
Query: 220 ARRIFDKMM----ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
A +F +M N T++ ++ + ++G+ LF +M+ ++ D D + +
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 276 ACAELGDLR-LGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK 334
E G + + H +EE + ++ +I G+ E+A ++ ++M
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETY-----EGIIFACGKGGLHEDARKILQYMTA 450
Query: 335 R----SNISWTTMICAFAKQGYANEALAIFELMQSLGANEA 371
S+ ++T +I AF + EAL F M +G+N +
Sbjct: 451 NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPS 491
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 19/265 (7%)
Query: 114 RKSVILFNQM-RAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
++S+ LF M R +PN Y+ ++S R GLL + +V + G +VF T
Sbjct: 122 QRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTA 181
Query: 173 LINLYGMAGA-DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG-NVEGARRIFDKM--- 227
LIN YG G + +E R+ +E +I+ +N+++ R G + EG +F +M
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 228 -MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
++ ++VT+ T+++ A G +A ++F M + D L G LR
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD---LTTYSHLVETFGKLRRL 298
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM------PKRSNISW 340
+ + E SG S + S N L+ YA G I+EA VF M P + ++
Sbjct: 299 EKVCDLLGEMASGGSLPDITSY-NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN--TY 355
Query: 341 TTMICAFAKQGYANEALAIFELMQS 365
+ ++ F + G ++ +F M+S
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKS 380
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 29/288 (10%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P +T +N ++ +A+S S ++++ +F+QM+AA PN TYS LL+ +SG + Q+
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV---FDEMGERNI-VCWNSMLAV 210
+ + P+ LI ++G G Y + V F +M E NI + +
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGG------YFKEVVTLFHDMVEENIEPDMETYEGI 428
Query: 211 YMRCGNV---EGARRIFDKMMERNVV----TWTTMIAGYARNGKCRQALILFNKMRRAHV 263
CG E AR+I M ++V +T +I + + +AL+ FN M
Sbjct: 429 IFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
+ + + L + A G ++ I + + + +++ NA I Y G E
Sbjct: 489 NPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF----NAQIEAYKQGGKFE 544
Query: 324 EAYEVF------RWMPKRSNISWTTMICAFAKQGYANEALAIFELMQS 365
EA + + R P + + +FA+ +E FE M++
Sbjct: 545 EAVKTYVDMEKSRCDPDERTLEAVLSVYSFAR--LVDECREQFEEMKA 590
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 109/205 (53%), Gaps = 9/205 (4%)
Query: 162 GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGAR 221
G NVF+ + ++N Y + A+R FD+ + N+V ++++ Y++ E A
Sbjct: 2 GLASNVFVGSAVLNCYVKLST---LTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEAL 58
Query: 222 RIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL-DQVSLVAALSACAEL 280
+F M ER+VVTW +I G+++ G+ +A+ F M R V + ++ + A++A + +
Sbjct: 59 SLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNI 118
Query: 281 GDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM--PKRSNI 338
G+ IH K GK ++ + N+LI Y+ CG +E++ F + +R+ +
Sbjct: 119 ASHGAGKSIHA-CAIKFLGKRFNVFVW--NSLISFYSKCGNMEDSLLAFNKLEEEQRNIV 175
Query: 339 SWTTMICAFAKQGYANEALAIFELM 363
SW +MI +A G EA+A+FE M
Sbjct: 176 SWNSMIWGYAHNGRGEEAVAMFEKM 200
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 45/284 (15%)
Query: 69 LAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILF-NQMRAAE 127
+ L+S Y+ A +F+ + SV WN +I G +++ ++V F + +R
Sbjct: 41 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 100
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHG-RVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
PN T+ ++ + G+ +H + G NVF+ +LI+ Y G +
Sbjct: 101 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG---NM 157
Query: 187 EYAQRVFDEMGE--RNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYAR 244
E + F+++ E RNIV WNSM+ W GYA
Sbjct: 158 EDSLLAFNKLEEEQRNIVSWNSMI--------------------------W-----GYAH 186
Query: 245 NGKCRQALILFNKM-RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
NG+ +A+ +F KM + ++ + V+++ L AC G ++ G + Y + ++
Sbjct: 187 NGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEG---YMYFNKAVNDYDDP 243
Query: 304 LLISLNN--ALIHMYASCGVIEEAYEVFRWMPKRSNIS-WTTMI 344
L+ L + ++ M + G +EA E+ + MP I W ++
Sbjct: 244 NLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALL 287
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 155/331 (46%), Gaps = 29/331 (8%)
Query: 56 QIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEV----KNPSVTLWNQMIRGHARSE 111
QI+ GF L+ + HL A ++F ++ P+V +N ++ G
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
+ L M EPN++T++ L+ + G L E ++++ ++ YP+VF
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGER-----NIVCWNSMLAVYMRCGNVEGARRIFDK 226
+LIN M G ++ A+++F M ER N V + +++ + + VE +IF +
Sbjct: 298 SLINGLCMYGL---LDEARQMFYLM-ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 227 MMER----NVVTWTTMIAGYARNGKCRQALILFNKM--RRAHVDLDQVSLVAALSACAEL 280
M ++ N +T+T +I GY G+ A +FN+M RRA D+ +++ C
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN-- 411
Query: 281 GDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM----PKRS 336
G + I Y+ + + + I +I G +E+A+++F + K +
Sbjct: 412 GKVEKALMIFEYMRK----REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLG 367
I++TTMI F ++G +EA ++F+ M+ G
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 126/283 (44%), Gaps = 19/283 (6%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P + N ++ S P ++ +M EP+L+T++ LL+G + + +
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAV 210
++L G+ PNV T LI + + +A +F++MG N+V +N+++
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRC---LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 211 YMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
G A + MM+R NV+T+T +I + + GK +A L+N M + V D
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+ + ++ G L R + Y+ E+ ++ + LIH + +E+
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMF-YLMERNGCYPNEVIYT---TLIHGFCKSKRVEDGM 348
Query: 327 EVFRWMPKR----SNISWTTMICAFAKQGYANEALAIFELMQS 365
++F M ++ + I++T +I + G + A +F M S
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 136/333 (40%), Gaps = 55/333 (16%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K+ K P + + ++ G+ ++ LF+Q+ +PN++TY+ L+ ++
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER---NIVC 203
L ++ ++ NG PNV L+ G+ + A + D M R N++
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVT--GLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 204 WNSMLAVYMRCGNVEGARRIFDKM----------------------------------ME 229
+ +++ +++ G + A+ +++ M ME
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 230 R-----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLR 284
R N V +TT+I G+ ++ + + +F +M + V + ++ + +G
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 285 LGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISW 340
+ + + ++S + I N L+ G +E+A +F +M KR + +++
Sbjct: 381 VAQEVF----NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 341 TTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
T +I K G +A F+L SL + KP
Sbjct: 437 TIIIQGMCKLGKVEDA---FDLFCSLFSKGMKP 466
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 78/182 (42%), Gaps = 7/182 (3%)
Query: 21 LIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASG 80
L+ N + ++ L H K ++ +I ++ G + L+ Y G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 81 HLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
A +VF ++ + P + +N ++ G + K++++F MR E + N++TY+
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
++ G + G + + + + G PNV T +I+ + G + A +F +M
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL---IHEADSLFKKM 494
Query: 197 GE 198
E
Sbjct: 495 KE 496
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 158/357 (44%), Gaps = 26/357 (7%)
Query: 29 TSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYIL-AKLLSFYIASGHLLSAHK 87
TS + L+Q + K + +++T++ G I + L+S Y G SA +
Sbjct: 196 TSSTYNSVILMLMQEGQHEK-VHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 88 VFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA 143
+F E+K+ P+ ++ ++ + + K++ LF +M+ A P + TY+ L+ G
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 144 RSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG----ER 199
++G + E + +L +G P+V NL+N+ G G VE VF EMG
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR---VEELTNVFSEMGMWRCTP 371
Query: 200 NIVCWNSML-AVYMRCGNVEGARRIFDKMMERNV----VTWTTMIAGYARNGKCRQALIL 254
+V +N+++ A++ +V FDKM +V T++ +I GY + + +AL+L
Sbjct: 372 TVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLL 431
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIH 314
+M + + ++A + + ++E S + +I
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYA----VMIK 487
Query: 315 MYASCGVIEEAYEVFRWMPKRSN----ISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ CG + EA ++F M + + ++ ++ K G NEA ++ M+ G
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 84 SAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
+A+++FKE+K N S ++ MI+ + ++V LFN+M+ + P++ Y+ L+
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
SG ++G++ E + ++ NG ++ ++N + G A +F+ +
Sbjct: 522 SGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP---RRAIEMFETIKHS 578
Query: 200 NI----VCWNSMLAVYMRCGNVEGARRIF----DKMMERNVVTWTTMI 239
I V +N++L + G E A R+ DK E + +T+++++
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 136/301 (45%), Gaps = 17/301 (5%)
Query: 80 GHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
G+ A VF+ +K P+ +N MI + ++ S L+ +MR+ + +PN+ TY
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
+ L++ AR GL + E++ ++ +G P+V++ L+ Y AG +G +
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 196 MG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVV----TWTTMIAGYARNGKCRQ 250
MG E + +N M+ Y R G A +F++M + + +++ Y++ +
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 251 ALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNN 310
+ +M V+ D L + L+ LG I +E IS N
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD----ISTYN 478
Query: 311 ALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICAFAKQGYANEALAIFELMQSL 366
LI++Y G +E E+F + ++ ++WT+ I A++++ + L +FE M
Sbjct: 479 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 538
Query: 367 G 367
G
Sbjct: 539 G 539
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 112/239 (46%), Gaps = 15/239 (6%)
Query: 52 QIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGH 107
+I Q+ G Y+ L+ Y +G+ A ++F +++ P +N M+ +
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 108 ARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNV 167
R+ + +F +M+ P + ++ LLS +++ + + E + + NG P+
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 168 FMKTNLINLYGMAGADFGVEYAQRVFDEMGE----RNIVCWNSMLAVYMRCGNVEGARRI 223
F+ +++NLYG G +E ++ EM +I +N ++ +Y + G +E +
Sbjct: 440 FVLNSMLNLYGRLGQFTKME---KILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 496
Query: 224 FDKMMERN----VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
F ++ E+N VVTWT+ I Y+R + L +F +M + D + LSAC+
Sbjct: 497 FVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACS 555
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 38/308 (12%)
Query: 80 GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQ--MRAAEAEPNLLTYSF 137
G L S H + ++ N SV L R S+IL + +R + +P+++ ++
Sbjct: 110 GALPSTHASWDDLINVSVQL---------RLNKKWDSIILVCEWILRKSSFQPDVICFNL 160
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
L+ + +E E ++ ++L + Y P LI Y MAG +E A+ V EM
Sbjct: 161 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL---IERAEVVLVEMQ 217
Query: 198 ERNIVCWNSMLAVY--------MRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARN 245
++ + VY R GN E A +F +M + T+ MI Y +
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277
Query: 246 GKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL 305
K + L+ +MR + + A ++A A G I E+L
Sbjct: 278 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF----EQLQEDGLEPD 333
Query: 306 ISLNNALIHMYASCGVIEEAYEVFRWM------PKRSNISWTTMICAFAKQGYANEALAI 359
+ + NAL+ Y+ G A E+F M P R+ S+ M+ A+ + G ++A A+
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGLHSDAEAV 391
Query: 360 FELMQSLG 367
FE M+ LG
Sbjct: 392 FEEMKRLG 399
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 199 RNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKM 258
+N++ N ++ +Y +CGN+ AR++FD M ERNVV+WT +I GY + G ++ LF+ M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 259 RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYAS 318
+H ++ +L + L++C G+ +H + KL G S+ ++ NA+I MY
Sbjct: 154 -LSHCFPNEFTLSSVLTSCR----YEPGKQVHG-LALKL-GLHCSIYVA--NAVISMYGR 204
Query: 319 C---GVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
C EA+ VF + ++ ++W +MI AF +A+ +F M S G
Sbjct: 205 CHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG 256
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 141/338 (41%), Gaps = 49/338 (14%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHK---VFKEVK 93
L +L SC+ + Q+H + G Y+ ++S Y +A++ VF+ +K
Sbjct: 164 LSSVLTSCR-YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIK 222
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE- 152
++ WN MI +K++ +F +M + + T + S +S L E
Sbjct: 223 FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 153 -----QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGE-RNIVCWNS 206
Q+H + +G + T LI +Y D+ Y ++F EM R+IV WN
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCY--KLFMEMSHCRDIVAWNG 340
Query: 207 MLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
++ + ++D +A+ LF ++R+ + D
Sbjct: 341 IITAFA----------VYDP----------------------ERAIHLFGQLRQEKLSPD 368
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+ + L ACA L R IH + + G + + LNN+LIH YA CG ++
Sbjct: 369 WYTFSSVLKACAGLVTARHALSIHAQV---IKGGFLADTV-LNNSLIHAYAKCGSLDLCM 424
Query: 327 EVFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQ 364
VF M R +SW +M+ A++ G + L +F+ M
Sbjct: 425 RVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD 462
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 140/321 (43%), Gaps = 39/321 (12%)
Query: 34 QQHLFHLLQSCKTLKYLSQ---IHTQIVIHGFS-QKSYILAK-LLSFYIASGHLLSAHKV 88
QQ L Q+C + L +H ++ H + ++ ILA L++ Y G++L A +V
Sbjct: 59 QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQV 118
Query: 89 FKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLL 148
F + +V W +I G+ ++ + ++ LF+ M + PN T S +L+ C
Sbjct: 119 FDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCR----Y 173
Query: 149 REGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSML 208
G+QVHG L G + ++++ +I++YG A VF+ + +N+V WNSM+
Sbjct: 174 EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMI 233
Query: 209 AVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
A + C + A +F +M V G+ R L N + D V
Sbjct: 234 AAFQCCNLGKKAIGVFMRMHSDGV--------GFDR-------ATLLNICSSLYKSSDLV 278
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ C +L L + + T E + LI + + ++ Y C Y++
Sbjct: 279 PNEVS-KCCLQLHSLTVKSGLVTQTE------VATALIKVYSEMLEDYTDC------YKL 325
Query: 329 FRWMPK-RSNISWTTMICAFA 348
F M R ++W +I AFA
Sbjct: 326 FMEMSHCRDIVAWNGIITAFA 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 21/231 (9%)
Query: 40 LLQSCK---TLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+L++C T ++ IH Q++ GF + + L+ Y G L +VF ++ +
Sbjct: 375 VLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRD 434
Query: 97 VTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHG 156
V WN M++ ++ + +F +M + P+ T+ LLS C+ +G + EG ++
Sbjct: 435 VVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFR 491
Query: 157 RVLVNGYYPNVFMKTN----LINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVY 211
+ P + N +I++ ++ A+ E A+ V +M + + V W ++L
Sbjct: 492 SMFEK---PETLPQLNHYACVIDM--LSRAERFAE-AEEVIKQMPMDPDAVVWIALLGSC 545
Query: 212 MRCGNVEGARRIFDKMME----RNVVTWTTMIAGYARNGKCRQALILFNKM 258
+ GN + DK+ E N +++ M Y G +A + +M
Sbjct: 546 RKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEM 596
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 137/305 (44%), Gaps = 23/305 (7%)
Query: 79 SGHLLSAHKVFKEVKNP----SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
G + +A +FKE++ SV +N ++RG ++ +L M + E PN++T
Sbjct: 231 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 290
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
++ LL + G L+E +++ ++ G PN+ L++ Y M + A + D
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR---LSEANNMLD 347
Query: 195 EMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNG 246
M +IV + S++ Y V+ ++F + +R N VT++ ++ G+ ++G
Sbjct: 348 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 407
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
K + A LF +M V D ++ L + G L I E L L I
Sbjct: 408 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF----EDLQKSKMDLGI 463
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFEL 362
+ +I G +E+A+ +F +P K + +++T MI K+G +EA +
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523
Query: 363 MQSLG 367
M+ G
Sbjct: 524 MEEDG 528
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 159/376 (42%), Gaps = 40/376 (10%)
Query: 17 LLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFY 76
L +E+I + + S + F + K + Q+ ++G + Y L +++ +
Sbjct: 65 LFQEMIRSRPLP-SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 123
Query: 77 IASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
A+ V +V P T +N +I+G ++V+L ++M +P++
Sbjct: 124 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 183
Query: 133 LTYSFLLSGCARSG-------LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG 185
+TY+ +++G RSG LLR+ E+ + + +VF + +I+ G
Sbjct: 184 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKA-------DVFTYSTIIDSLCRDGC--- 233
Query: 186 VEYAQRVFDEMGERNI----VCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTT 237
++ A +F EM + I V +NS++ + G + M+ R NV+T+
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293
Query: 238 MIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA-CAELGDLRLGRWIHTYIEEK 296
++ + + GK ++A L+ +M + + ++ + C + + + K
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353
Query: 297 LSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICAFAKQGY 352
S I +LI Y +++ +VFR + KR + ++++ ++ F + G
Sbjct: 354 CSPD-----IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 408
Query: 353 ANEALAIFELMQSLGA 368
A +F+ M S G
Sbjct: 409 IKLAEELFQEMVSHGV 424
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 28/305 (9%)
Query: 81 HLLSAHKVFKEVKN----PSVTLWNQMIR---GHAR-SESPRKSVILFNQMRAAEAEPNL 132
H+ A +F E++ P+V +N +I + R S++ R L + M + PN+
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR----LLSNMLEKKINPNV 328
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
+T++ L+ + G L E E++H ++ P+ LIN + M ++ A+++
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR---LDEAKQM 385
Query: 193 FDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYAR 244
F M + NI +N+++ + +C VE +F +M +R N VT+TT+I G+ +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 245 NGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSL 304
G C A ++F +M V D ++ L G L I Y+++ L
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK----SEMEL 501
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-ISWTTMICAFAKQGYANEALAIFELM 363
I + N +I G + EA+++F + + + +++ TMI + EA +F M
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 364 QSLGA 368
+ G
Sbjct: 562 KEDGT 566
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 31/287 (10%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ +N+++ A+ + L QM+ +L TYS ++ R L V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD---------EMGER-NIVCW 204
+++ GY P++ ++L+N G +++R+ D EMG + + +
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLN---------GYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRR 260
+++ A + D+M++R ++VT+ T++ G + G AL L NKM
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 261 AHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCG 320
A + + V + + + + + + T +E K G +++ N+LI+ + G
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK--GIRPNVVTY--NSLINCLCNYG 307
Query: 321 VIEEAYEVFRWM-PKRSN---ISWTTMICAFAKQGYANEALAIFELM 363
+A + M K+ N +++ +I AF K+G EA + E M
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 130/282 (46%), Gaps = 51/282 (18%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P+V + +I + +++ L+ +M +P++ TY+ L++G G + E +Q+
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIV----CWNSMLAV 210
++ G P+V LIN + + V+ ++F EM +R +V +N+++
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKR---VDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 211 YMRCGNVEGARRIFDKMMER-NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
Y + G + A+ IF +M R N+ T++ ++ G N + +AL+LF M+++ ++LD
Sbjct: 359 YFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD--- 415
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
I TY N +IH G +E+A+++F
Sbjct: 416 -------------------ITTY-----------------NIVIHGMCKIGNVEDAWDLF 439
Query: 330 RWMP----KRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
R + K +S+TTMI F ++ +++ ++ MQ G
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 13/282 (4%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ +++++ A+S++ + LF+ M +L +Y+ +++ R V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER-NIVCWNSMLAVYMR 213
G+++ GY P+V ++LIN + F +EMG R ++V +N+++ +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 214 CGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
G V A +FD+M + + VT+ +++AG +G+ A L M + + ++
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
A + + G + + Y E+++ + + N+LI+ G ++EA ++
Sbjct: 247 FTAVIDVFVKEG--KFSEAMKLY--EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 330 RWMPKR----SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
M + +++ T+I F K +E +F M G
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 160/366 (43%), Gaps = 57/366 (15%)
Query: 56 QIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSE 111
Q+V G + ++ +GH+ A +F +++N P V ++ ++ G S
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
R + L M + +P+++T++ L+ + G + E+++ ++ PN+F T
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKM 227
+LIN + M G V+ A+++F M + ++V + S++ + +C V+ A +IF +M
Sbjct: 287 SLINGFCMEGC---VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 228 MER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDL 283
++ N +T+TT+I G+ + GK A +F+ M V + + L G +
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 284 RLGRWIHTYIEEK-LSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR------- 335
+ I ++++ + G + + I N L+H G +E+A VF M KR
Sbjct: 404 KKALMIFEDMQKREMDGVAPN--IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 336 --------------------------------SNISWTTMICAFAKQGYANEALAIFELM 363
+ +++TTMI ++G +EA +F M
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Query: 364 QSLGAN 369
+ G +
Sbjct: 522 KEDGVS 527
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 147/356 (41%), Gaps = 29/356 (8%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH----KVFKEV 92
L +++ K + + + I G S Y L++ + S A K+ K
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
P + + +I G +++ + NQM +P+++ Y+ ++ ++G +
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSML 208
+ ++ G P+V M T+L+N +G A + M +R +++ +N+++
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGR---WRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 209 AVYMRCGNVEGARRIFDKMME----RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
+++ G A ++++M+ N+ T+T++I G+ G +A +F M
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 265 LDQV---SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGV 321
D V SL+ C ++ D + + ++ L+G + + LI + G
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAM--KIFYEMSQKGLTGNTITY-----TTLIQGFGQVGK 367
Query: 322 IEEAYEVFRWMPKR---SNI-SWTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
A EVF M R NI ++ ++ G +AL IFE MQ + P
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 136/289 (47%), Gaps = 27/289 (9%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ + +++ A+ + + L + ++ +L T + L++ +S
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGE----RNIVCWNSMLAV 210
G+++ G+ P++ T+LIN + + +E A + ++M E ++V + +++
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNR---MEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 211 YMRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
+ G+V A +FD+M + +VV +T+++ G +G+ R A L M + + D
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLN----NALIHMYASCGVI 322
++ A + A ++ G+++ E+L + + I+ N +LI+ + G +
Sbjct: 247 VITFNALIDAF-----VKEGKFLDA---EELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 323 EEAYEVFRWMPKR----SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+EA ++F M + +++T++I F K ++A+ IF M G
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 130/262 (49%), Gaps = 15/262 (5%)
Query: 47 LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSA----HKVFKEVKNPSVTLWNQ 102
+K +S + T++ G+S L+ Y G+ A ++ + PSV +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 103 MIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNG 162
+I ++ + +++ +QMR PN TY+ L+ G ++ G + E +V + NG
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 163 YYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVE 218
+ P+V LIN + + G +E A V ++M E+ ++V ++++L+ + R +V+
Sbjct: 411 FSPSVVTYNALINGHCVTGK---MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 219 GARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
A R+ +M+E+ + +T++++I G+ + ++A L+ +M R + D+ + A +
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 275 SACAELGDLRLGRWIHTYIEEK 296
+A GDL +H + EK
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEK 549
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 153/356 (42%), Gaps = 30/356 (8%)
Query: 27 ITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH 86
+T S I L H + + + Q+ + G L+ + G++ A+
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 87 KVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGC 142
+V +E+ + PSV +N +I GH + ++ + M+ P++++YS +LSG
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 143 ARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI- 201
RS + E +V ++ G P+ ++LI G E A +++EM +
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ--GFCEQRRTKE-ACDLYEEMLRVGLP 517
Query: 202 ---VCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALIL 254
+ +++ Y G++E A ++ ++M+E+ +VVT++ +I G + + R+A L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 255 FNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY-----------IEEKLSGKSQS 303
K+ V+ + C+ + + I + + E + GK+
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 304 LLISLNNALIHMYASCGVIEEAYEVFRWMPKRS----NISWTTMICAFAKQGYANE 355
+ N +IH + G I +AY +++ M K ++ ++ A K+G NE
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 172/394 (43%), Gaps = 48/394 (12%)
Query: 7 TVHFQSSYQMLLEELIPANTITTSRILQQH---LFHLLQSCKTLKYLSQIHTQIVIHGFS 63
T+H + +++ I A + + ++ +F LQ L Y + +V+ +S
Sbjct: 86 TLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYS 145
Query: 64 QKSYILAKLLSFYIASGH-----LLS-----------------AHKVFKEV----KNPSV 97
+ S I L ++A H +LS A VFKE+ +P+V
Sbjct: 146 RLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNV 205
Query: 98 TLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGR 157
+N +IRG + + ++ LF++M PN++TY+ L+ G + + +G ++
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 158 VLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMR 213
+ + G PN+ +IN G V + V EM R + V +N+++ Y +
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSF---VLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 214 CGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
GN A + +M+ +V+T+T++I + G +A+ ++MR + ++ +
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
+ ++ G + E +G S S++ NALI+ + G +E+A V
Sbjct: 383 YTTLVDGFSQKG--YMNEAYRVLREMNDNGFSPSVVTY--NALINGHCVTGKMEDAIAVL 438
Query: 330 RWMPKR----SNISWTTMICAFAKQGYANEALAI 359
M ++ +S++T++ F + +EAL +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 56/292 (19%)
Query: 61 GFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKS 116
G S + +LS + S + A +V +E+ P ++ +I+G +++
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 117 VILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINL 176
L+ +M P+ TY+ L++ G L + Q+H ++ G P+V + LIN
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN- 563
Query: 177 YGMAGADFGVEYAQ---RVFDEMGERNIVCWNSMLAVYMRCGNVE--------------- 218
G+ E + ++F E + V +++++ C N+E
Sbjct: 564 -GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE---NCSNIEFKSVVSLIKGFCMKG 619
Query: 219 ---GARRIFDKMMERN----VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
A ++F+ M+ +N + MI G+ R G R+A L+ +M ++ L V+++
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
A + A + G + LN+ ++H+ SC + E
Sbjct: 680 ALVKALHKEGKVN----------------------ELNSVIVHVLRSCELSE 709
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 139/304 (45%), Gaps = 23/304 (7%)
Query: 81 HLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
H A +F E++N P+V ++ +I E + L + M + PN++T++
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
L+ + G L E E+++ ++ P++F ++LIN + M ++ A+ +F+ M
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR---LDEAKHMFELM 391
Query: 197 GER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKC 248
+ N+V +N+++ + + ++ +F +M +R N VT+TT+I G+ + C
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
A ++F +M V + ++ L + G L + Y++ I
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR----SKMEPTIYT 507
Query: 309 NNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELMQ 364
N +I G +E+ +++F + K I + TMI F ++G EA A+F M+
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 365 SLGA 368
G
Sbjct: 568 EDGP 571
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 136/326 (41%), Gaps = 48/326 (14%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K+ K PS+ + ++ G+ + +V L +QM P+ +T++ L+ G
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 147 LLREGEQVHGRVLVNGYYPN----------------VFMKTNLINLYGMAGADFGV---- 186
E + R++ G PN + + NL+N A + V
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 187 ------------EYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
+ A +F EM + N++ ++S+++ A R+ M+ER
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 231 ----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
NVVT+ +I + + GK +A L+++M + +D D + + ++ + D RL
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-MHD-RLD 382
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTT 342
H + E + K + N LI+ + I+E E+FR M +R + +++TT
Sbjct: 383 EAKHMF--ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 343 MICAFAKQGYANEALAIFELMQSLGA 368
+I F + + A +F+ M S G
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGV 466
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 54/318 (16%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ +N+++ A+ + + L +M+ NL TY+ L++ R + +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 155 HGRVLVNGYYPNVFMKTNLINLY--------GMAGADFGVEYAQR--------------- 191
G+++ GY P++ ++L+N Y +A D VE R
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 192 ---------VFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKM----MERNVVT 234
+ D M +R N+V + ++ + G+++ A + +KM +E NVV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 235 WTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV---SLVAALSACAELGDLRLGRWIHT 291
++T+I + AL LF +M V + + SL++ L D R +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD--ASRLLSD 320
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS----NISWTTMICAF 347
IE K++ + NALI + G + EA +++ M KRS +++++I F
Sbjct: 321 MIERKINPNVVTF-----NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 348 AKQGYANEALAIFELMQS 365
+EA +FELM S
Sbjct: 376 CMHDRLDEAKHMFELMIS 393
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 160/329 (48%), Gaps = 22/329 (6%)
Query: 49 YLSQIHTQIVIHGFSQKSYILAKLLSF----YIASGHLLSAHKVFKEVKNPSVTLWNQMI 104
Y +H + Q L +L++ ++ G L+ +VFKE + S T+++ ++
Sbjct: 107 YCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELV---RVFKEF-SFSPTVFDMIL 162
Query: 105 RGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYY 164
+ +A + ++ +F+ M P+LL+ + LLS R G V+ +++
Sbjct: 163 KVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVS 222
Query: 165 PNVFMKTNLINLYGMAG-ADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARR 222
P+VF + ++N Y +G D + +A+ +G E N+V +NS++ Y G+VEG R
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 282
Query: 223 IFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
+ M ER NVVT+T++I GY + G +A +F ++ + DQ +
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 279 ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF----RWMPK 334
G +R +H + E + ++ + ++ N+LI+ Y G + EA ++F W K
Sbjct: 343 RTGQIRDAVRVHDNMIE-IGVRTNT---TICNSLINGYCKSGQLVEAEQIFSRMNDWSLK 398
Query: 335 RSNISWTTMICAFAKQGYANEALAIFELM 363
+ ++ T++ + + GY +EAL + + M
Sbjct: 399 PDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 27/288 (9%)
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+V + +I+G+ + ++ +F ++ + + Y L+ G R+G +R+ +VH
Sbjct: 295 NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVH 354
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIV----CWNSMLAVY 211
++ G N + +LIN Y +G + A+++F M + ++ +N+++ Y
Sbjct: 355 DNMIEIGVRTNTTICNSLINGYCKSGQ---LVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 212 MRCGNVEGARRIFDKMMERNVV----TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
R G V+ A ++ D+M ++ VV T+ ++ GY+R G L L+ M + V+ D+
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 268 VSLVAALSACAELGDLR--LGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
+S L A +LGD + W E L+ + I+L N +I + EA
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLW-----ENVLARGLLTDTITL-NVMISGLCKMEKVNEA 525
Query: 326 YE------VFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
E +FR P ++ + + K G EA A+ E M+ G
Sbjct: 526 KEILDNVNIFRCKPAVQ--TYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 144/328 (43%), Gaps = 18/328 (5%)
Query: 32 ILQQHLFHLLQS--CKT--LKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHK 87
+ QH++ +L C+T ++ ++H ++ G + I L++ Y SG L+ A +
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQ 387
Query: 88 VFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA 143
+F + + P +N ++ G+ R+ +++ L +QM E P ++TY+ LL G +
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 144 RSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN-LYGMAGADFGVEYAQRVFDEMGERNIV 202
R G + + +L G + + L+ L+ + + ++ + V + +
Sbjct: 448 RIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 507
Query: 203 CWNSMLAVYMRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKM 258
N M++ + V A+ I D + + V T+ + GY + G ++A + M
Sbjct: 508 TLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM 567
Query: 259 RRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYAS 318
R + + + L + A L + IE + G + + ++ ALI + +
Sbjct: 568 ERKGI-FPTIEMYNTLISGA-FKYRHLNKVADLVIELRARGLTPT--VATYGALITGWCN 623
Query: 319 CGVIEEAYEVFRWMPKRSNISWTTMICA 346
G+I++AY M ++ I+ IC+
Sbjct: 624 IGMIDKAYATCFEMIEKG-ITLNVNICS 650
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 83 LSAHKVFKEVKN--------PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA-EPNLL 133
L K+ + V+N P+ ++N I G ++ + LF+ + +++ P+
Sbjct: 697 LKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEY 756
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
TY+ L+ GCA +G + + + + + G PN+ LI G V+ AQR+
Sbjct: 757 TYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG---NVDRAQRLL 813
Query: 194 DEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVV 233
++ ++ N + +N+++ ++ GNV A R+ +KM+E+ +V
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 21/288 (7%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P++ ++N +I G + K L ++RA P + TY L++G G++ +
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 155 HGRVLVNGYYPNVFMKTNLIN-LYGMAGADFGVEYAQRVFD---------EMGERNIVCW 204
++ G NV + + + N L+ + D Q++ D + E
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 693
Query: 205 NSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
+ L +VE + K++ N + + IAG + GK A LF+ + +
Sbjct: 694 TTCLKTQKIAESVENSTP--KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751
Query: 265 L-DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIE 323
+ D+ + + CA GD+ + E L G +++ NALI G ++
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRD--EMALKGIIPNIVTY--NALIKGLCKLGNVD 807
Query: 324 EAYEVFRWMPKR----SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
A + +P++ + I++ T+I K G EA+ + E M G
Sbjct: 808 RAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 134/304 (44%), Gaps = 23/304 (7%)
Query: 80 GHLLSAHKVFKEVKNPSVTL----WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
G L +A +F E++ +T +N +I G + L M + PN++T+
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
S L+ + G LRE E++H ++ G P+ T+LI+ + ++ A ++ D
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH---LDKANQMVDL 393
Query: 196 M----GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV----VTWTTMIAGYARNGK 247
M + NI +N ++ Y + ++ +F KM R V VT+ T+I G+ GK
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
A LF +M V + V+ L + G+ I EK+ L I
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF----EKIEKSKMELDIG 509
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELM 363
+ N +IH + +++A+++F +P K ++ MI K+G +EA +F M
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 364 QSLG 367
+ G
Sbjct: 570 EEDG 573
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 31/259 (11%)
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
EPN +T+S L++G G + E ++ R++ G+ P++ L+N ++G +
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE---AE 211
Query: 189 AQRVFDEMGE----RNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV----VTWTTMIA 240
A + D+M E N V + +L V + G A + KM ERN+ V ++ +I
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 241 GYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW------IHTYIE 294
G ++G A LFN+M + + ++ + G GRW + I+
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG-----GFCNAGRWDDGAKLLRDMIK 326
Query: 295 EKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICAFAKQ 350
K++ + + LI + G + EA E+ + M R I++T++I F K+
Sbjct: 327 RKINPNVVTF-----SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 351 GYANEALAIFELMQSLGAN 369
+ ++A + +LM S G +
Sbjct: 382 NHLDKANQMVDLMVSKGCD 400
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 156/377 (41%), Gaps = 50/377 (13%)
Query: 36 HLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH----KVFKE 91
LF + K + + Q+ + G + Y L+ +++ + L A K+ K
Sbjct: 93 RLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL 152
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
P+ ++ +I G +++ L ++M +P+L+T + L++G SG E
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI----VCWNSM 207
+ +++ G PN ++N+ +G A + +M ERNI V ++ +
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ---TALAMELLRKMEERNIKLDAVKYSII 269
Query: 208 LAVYMRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
+ + G+++ A +F++M + N++T+ +I G+ G+ L M + +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIH-------------TYI--------EEKLSGKSQ 302
+ + V+ + + + G LR +H TY E L +Q
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 303 --SLLISLN--------NALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICAFA 348
L++S N LI+ Y I++ E+FR M R +++ T+I F
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 349 KQGYANEALAIFELMQS 365
+ G N A +F+ M S
Sbjct: 450 ELGKLNVAKELFQEMVS 466
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 123/272 (45%), Gaps = 15/272 (5%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P+V ++++ A+++ + L QM NL T S +++ R L
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAG-ADFGVEYAQRVFDEMGER-NIVCWNSMLAVYM 212
G+++ GY PN + LIN + G +E R+ EMG + +++ N+++
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV-EMGHKPDLITINTLVNGLC 204
Query: 213 RCGNVEGARRIFDKMME----RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
G A + DKM+E N VT+ ++ ++G+ A+ L KM ++ LD V
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ + G L + + E ++ G + +++ N LI + + G ++ ++
Sbjct: 265 KYSIIIDGLCKHG--SLDNAFNLFNEMEMKGITTNIITY--NILIGGFCNAGRWDDGAKL 320
Query: 329 FRWMPKR----SNISWTTMICAFAKQGYANEA 356
R M KR + ++++ +I +F K+G EA
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 146/317 (46%), Gaps = 28/317 (8%)
Query: 72 LLSFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHAR-SESPRKSVILFNQMRAA 126
+L Y +G A +F+ +K +P++ +N ++ + S RK + + ++MR+
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 127 EAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
+ + T S +LS CAR GLLRE ++ + GY P L+ ++G AG
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV---Y 332
Query: 187 EYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTM 238
A V EM E + V +N ++A Y+R G + A + + M ++ N +T+TT+
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 239 IAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLS 298
I Y + GK +AL LF M+ A + + A LS + R I + K +
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS--RSNEMIKMLCDMKSN 450
Query: 299 GKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM------PKRSNISWTTMICAFAKQGY 352
G S + + N ++ + + G+ + VFR M P R ++ T+I A+ + G
Sbjct: 451 GCSPNR--ATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD--TFNTLISAYGRCGS 506
Query: 353 ANEALAIFELMQSLGAN 369
+A ++ M G N
Sbjct: 507 EVDASKMYGEMTRAGFN 523
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 133/320 (41%), Gaps = 52/320 (16%)
Query: 86 HKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSG 141
++VF+E+K+ P +N +I + R S + ++ +M A + TY+ LL+
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 142 CARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAG-------------------- 181
AR G R GE V + G+ P + ++ Y G
Sbjct: 536 LARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Query: 182 ---------ADF------GVEYAQRVFDEMGER-NIVCWNSMLAVYMRCGNVEGARRIFD 225
A+F G E A +F + G + ++V +NSML+++ R + A I +
Sbjct: 596 WMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILE 655
Query: 226 KMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELG 281
+ E ++VT+ +++ Y R G+C +A + + ++ + D VS + G
Sbjct: 656 SIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG 715
Query: 282 DLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK---RSN- 337
++ + + + E + I N + Y + G+ E +V M K R N
Sbjct: 716 LMQEAVRMLSEMTE----RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNE 771
Query: 338 ISWTTMICAFAKQGYANEAL 357
+++ ++ + + G +EA+
Sbjct: 772 LTFKMVVDGYCRAGKYSEAM 791
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 10/254 (3%)
Query: 90 KEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLR 149
KE P WN + G+A P K++ + +M+ PN+++++ + SGC+++G R
Sbjct: 51 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 110
Query: 150 EGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVC----WN 205
+V ++ G PN + L+ + G + + V +N++C
Sbjct: 111 NALKVFIKMQEEGVGPNAATMSTLLKILGCLSL---LHSGKEVHGFCLRKNLICDAYVAT 167
Query: 206 SMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
+++ +Y + G+++ A IF + +++ +W M+ GYA G+ + + F+ M A ++
Sbjct: 168 ALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 227
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
D ++ + LS C G ++ G W Y + S I + ++ + G ++EA
Sbjct: 228 DAITFTSVLSVCKNSGLVQEG-W--KYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA 284
Query: 326 YEVFRWMPKRSNIS 339
++ + M + + +
Sbjct: 285 WDFIQTMSLKPDAT 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 50/256 (19%)
Query: 118 ILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLY 177
++F+ M A N++ ++ L+SG + + LL++ E + R+ G P+
Sbjct: 13 MVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA---------- 58
Query: 178 GMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVV 233
+ WNS+ + Y G E A + KM E+ NVV
Sbjct: 59 ------------------------ITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 94
Query: 234 TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYI 293
+WT + +G ++NG R AL +F KM+ V + ++ L L L G+ +H +
Sbjct: 95 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 154
Query: 294 EEKLSGKSQSLLIS--LNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQG 351
K +L+ + AL+ MY G ++ A E+F + +S SW M+ +A G
Sbjct: 155 LRK------NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFG 208
Query: 352 YANEALAIFELMQSLG 367
E +A F +M G
Sbjct: 209 RGEEGIAAFSVMLEAG 224
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 19 EELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQK------SYILAKL 72
EE + N T S +L K L LS +H+ +HGF + +Y+ L
Sbjct: 121 EEGVGPNAATMSTLL-----------KILGCLSLLHSGKEVHGFCLRKNLICDAYVATAL 169
Query: 73 LSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNL 132
+ Y SG L SA ++F +KN S+ WN M+ G+A + + F+ M A EP+
Sbjct: 170 VDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDA 229
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVN-GYYPNVFMKTNLINLYGMAG 181
+T++ +LS C SGL++EG + + G P + + +++L G +G
Sbjct: 230 ITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 279
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 132/305 (43%), Gaps = 23/305 (7%)
Query: 79 SGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
G L +A +F E++ + ++ +IRG + L M + P+++
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
+S L+ + G LRE E++H ++ G P+ T+LI+ + ++ A + D
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ---LDKANHMLD 376
Query: 195 EMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV----VTWTTMIAGYARNG 246
M + NI +N ++ Y + ++ +F KM R V VT+ T+I G+ G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
K A LF +M V D VS L + G+ I EK+ L I
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF----EKIEKSKMELDI 492
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFEL 362
+ N +IH + +++A+++F +P K ++ MI K+G +EA +F
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 363 MQSLG 367
M+ G
Sbjct: 553 MEEDG 557
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 152/377 (40%), Gaps = 50/377 (13%)
Query: 36 HLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH----KVFKE 91
LF ++ K + + Q+ + G + Y L+ +++ L A K+ K
Sbjct: 77 RLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL 136
Query: 92 VKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREG 151
P ++ +I G +++ L ++M +P L+T + L++G +G + +
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 152 EQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNI----VCWNSM 207
+ R++ G+ PN ++ + +G A + +M ER I V ++ +
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ---TALAMELLRKMEERKIKLDAVKYSII 253
Query: 208 LAVYMRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHV 263
+ + G+++ A +F++M + +++ +TT+I G+ G+ L M + +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 264 DLDQVSLVAALSACAELGDLRLGRWIHT--------------------YIEEKLSGKSQS 303
D V+ A + + G LR +H + +E K+
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 304 LL-----------ISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICAFA 348
+L I N LI+ Y +I++ E+FR M R +++ T+I F
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 349 KQGYANEALAIFELMQS 365
+ G A +F+ M S
Sbjct: 434 ELGKLEVAKELFQEMVS 450
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 54/287 (18%)
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
NP+V +N +I A+ ++ LF++M +PN++TY+ L++G L E +Q
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLA 209
+ ++ P+V LIN + A V +F +M R N V + +++
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKK---VVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 210 VYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
+ + + + A+ +F +M+ N++T+ T++ G +NGK +A+++F ++++ ++
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
D I+TY N + G +E+
Sbjct: 484 D----------------------IYTY-----------------NIMSEGMCKAGKVEDG 504
Query: 326 YEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
+++F + K I++ TMI F K+G EA +F M+ G
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 64/333 (19%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K+ K PS+ N ++ G ++V L +QM +P+ +T++ L+ G +
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 147 LLREGEQVHGRVLVNGYYPNVF----------------MKTNLINLY--GMAGADF---- 184
E + R++V G P++ + NL+N G AD
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 185 ----------GVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
V+ A +F EM + ++ ++S+++ G A R+ M+ER
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 231 ----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
NVVT+ ++I +A+ GK +A LF++M + +D + V+ + ++ G
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN----------G 354
Query: 287 RWIHTYIEEKLSGKSQSLLISLN--------NALIHMYASCGVIEEAYEVFRWMPKR--- 335
+H ++E + + +L++S + N LI+ + + + E+FR M +R
Sbjct: 355 FCMHDRLDE--AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 336 -SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ +++TT+I F + + A +F+ M S G
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 17/277 (6%)
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
+N MI R ++ + +M P+++T + LL+G + E + +++
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 160 VNGYYPNVFMKTNLIN-LYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVE 218
GY P+ T L++ L+ A V +R+ + + ++V + +++ + G +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 219 GARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
A + +KM +E +VV ++T+I + AL LF +M + D V ++L
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD-VFTYSSL 281
Query: 275 SACAELGDLRLGRWIHT--YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
+C GRW + + L K +++ N+LI +A G + EA ++F M
Sbjct: 282 ISCL----CNYGRWSDASRLLSDMLERKINPNVVTF-NSLIDAFAKEGKLIEAEKLFDEM 336
Query: 333 PKRS---NI-SWTTMICAFAKQGYANEALAIFELMQS 365
+RS NI ++ ++I F +EA IF LM S
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 145/308 (47%), Gaps = 31/308 (10%)
Query: 81 HLLSAHKVFKEVKN----PSVTLWNQMIR---GHAR-SESPRKSVILFNQMRAAEAEPNL 132
H+ A +F E+ N P V ++ +I + R S++ R L + M + PN+
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR----LLSDMIERKINPNV 328
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
+T+S L+ + G L E E+++ ++ P++F ++LIN + M ++ A+ +
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR---LDEAKHM 385
Query: 193 FDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYAR 244
F+ M + N+V +++++ + + VE +F +M +R N VT+TT+I G+ +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 245 NGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSL 304
C A ++F +M V + ++ L + G L + Y++ +
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR----STMEP 501
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICAFAKQGYANEALAIF 360
I N +I G +E+ +E+F + + + I++ TMI F ++G EA ++
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 361 ELMQSLGA 368
+ M+ G
Sbjct: 562 KKMKEDGP 569
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
NP++ ++ +I + K+ L+ +M +PN+ TYS L++G L E +Q
Sbjct: 925 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 984
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLA 209
+ ++ PNV LIN + A V+ +F EM +R N V + +++
Sbjct: 985 MLELMIRKDCLPNVVTYNTLINGFCKAKR---VDKGMELFREMSQRGLVGNTVTYTTLIH 1041
Query: 210 VYMRCGNVEGARRIFDKMME----RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
+ + + + A+ +F +M+ N++T+ ++ G +NGK +A+++F ++R+ ++
Sbjct: 1042 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 1101
Query: 266 DQVSLVAALSACAELGDLRLG 286
D + + + G ++G
Sbjct: 1102 DIYTYNIMIEGMCKAGKWKMG 1122
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 145/323 (44%), Gaps = 23/323 (7%)
Query: 61 GFSQKSYILAKLLSFYIASGHLLSAHKVFKEV----KNPSVTLWNQMIRGHARSESPRKS 116
G+ L+ LL+ Y S + A + ++ P + +I G ++
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 117 VILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINL 176
V L +QM +P+L+TY +++G + G + + ++ +V + +I+
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID- 266
Query: 177 YGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER-- 230
G+ ++ A +F EM + ++ ++S+++ G A R+ M+ER
Sbjct: 267 -GLCKYKH-MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 231 --NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW 288
NVVT++ +I + + GK +A L+++M + +D D + + ++ + D RL
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-MHD-RLDEA 382
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMI 344
H + E + K + + LI + +EE E+FR M +R + +++TT+I
Sbjct: 383 KHMF--ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 345 CAFAKQGYANEALAIFELMQSLG 367
F + + A +F+ M S+G
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVG 463
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 23/194 (11%)
Query: 81 HLLSAHKVFKEVKN----PSVTLWNQMIR---GHAR-SESPRKSVILFNQMRAAEAEPNL 132
H A +F E++N P+V ++ +I + R S++ R L + M + PNL
Sbjct: 873 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR----LLSDMIERKINPNL 928
Query: 133 LTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRV 192
+T+S L+ + G L + E+++ ++ PN+F ++LIN + M + A+++
Sbjct: 929 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR---LGEAKQM 985
Query: 193 FDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYAR 244
+ M + N+V +N+++ + + V+ +F +M +R N VT+TT+I G+ +
Sbjct: 986 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 1045
Query: 245 NGKCRQALILFNKM 258
C A ++F +M
Sbjct: 1046 ARDCDNAQMVFKQM 1059
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 128/285 (44%), Gaps = 19/285 (6%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P + +I G ++V L ++M +P+L+TY +++G + G +
Sbjct: 786 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 845
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAV 210
++ NV + + +I+ + + A +F EM + N++ ++S+++
Sbjct: 846 LNKMEAAKIEANVVIYSTVIDSLCKYRHE---DDALNLFTEMENKGVRPNVITYSSLISC 902
Query: 211 YMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
G A R+ M+ER N+VT++ +I + + GK +A L+ +M + +D +
Sbjct: 903 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 962
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
+ + ++ L RLG E + K + N LI+ + +++
Sbjct: 963 IFTYSSLINGFCMLD--RLGEAKQML--ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 1018
Query: 327 EVFRWMPKR----SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
E+FR M +R + +++TT+I F + + A +F+ M S+G
Sbjct: 1019 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 1063
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 60/321 (18%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ +N+++ A+ + L QM+ +L TYS ++ R L V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 155 HGRVLVNGYYPNVFMKTNLINLY--------GMAGADFGVE--YAQRVF----------- 193
+++ GY P++ ++L+N Y +A D VE Y F
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 194 -----------DEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKM----MERNVVT 234
D+M +R ++V + +++ + G+++ A + KM +E +VV
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 235 WTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW------ 288
+ T+I G + AL LF +M + D V ++L +C GRW
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD-VFTYSSLISCL----CNYGRWSDASRL 315
Query: 289 IHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS----NISWTTMI 344
+ IE K++ + +ALI + G + EA +++ M KRS +++++I
Sbjct: 316 LSDMIERKINPNVVTF-----SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 345 CAFAKQGYANEALAIFELMQS 365
F +EA +FELM S
Sbjct: 371 NGFCMHDRLDEAKHMFELMIS 391
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 82/184 (44%), Gaps = 42/184 (22%)
Query: 84 SAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
+A VFK++ + P++ +N ++ G ++ K++++F ++ + EP++ TY+ ++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
G ++G + +G ++ + + G PNV
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNV-------------------------------- 538
Query: 200 NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILF 255
+ +N+M++ + R G+ E A + KM E N T+ T+I R+G + L
Sbjct: 539 --IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Query: 256 NKMR 259
+MR
Sbjct: 597 KEMR 600
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 124/274 (45%), Gaps = 15/274 (5%)
Query: 100 WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVL 159
+N +I R ++ L +M EP+++T + LL+G + + + +++
Sbjct: 721 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 780
Query: 160 VNGYYPNVFMKTNLIN-LYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVE 218
GY P+ T LI+ L+ A V R+ + ++V + +++ + G+ +
Sbjct: 781 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 840
Query: 219 GARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAAL 274
A + +KM +E NVV ++T+I + AL LF +M V + ++ + +
Sbjct: 841 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 900
Query: 275 SACAELGD-LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP 333
S G R + IE K++ L++ +ALI + G + +A +++ M
Sbjct: 901 SCLCNYGRWSDASRLLSDMIERKINPN----LVTF-SALIDAFVKKGKLVKAEKLYEEMI 955
Query: 334 KRS---NI-SWTTMICAFAKQGYANEALAIFELM 363
KRS NI +++++I F EA + ELM
Sbjct: 956 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 989
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 31/327 (9%)
Query: 61 GFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKS 116
GFS Y +++ G A +VF E+ +P T + ++ + ++
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 117 VILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINL 176
+F+ MR+ + P+L+ +S ++S RSG L + V G P+ + T LI
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 177 YGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER-- 230
Y G + A + +EM ++ ++V +N++L + + A ++F++M ER
Sbjct: 420 YCRKGM---ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 231 --NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR- 287
+ T T +I G+ + G + A+ LF KM+ + LD V+ L ++GD+ +
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 288 -WIHTYIEEKLSGK-SQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMIC 345
W +E L S S+L+ NAL S G + EA+ V+ M + NI T MIC
Sbjct: 537 IWADMVSKEILPTPISYSILV---NAL----CSKGHLAEAFRVWDEMISK-NIKPTVMIC 588
Query: 346 -----AFAKQGYANEALAIFELMQSLG 367
+ + G A++ + E M S G
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEG 615
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 138/329 (41%), Gaps = 58/329 (17%)
Query: 88 VFKEVKNPSVTL----WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCA 143
V++E+ V + N M+ + K +Q++ P+++TY+ L+S +
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 144 RSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN------LYGMAGADFG------------ 185
GL+ E ++ + G+ P V+ +IN Y A F
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 186 --------------VEYAQRVFDEMGERNI----VCWNSMLAVYMRCGNVEGARRIFDKM 227
V ++VF +M R++ VC++SM++++ R GN++ A F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 228 MERNV----VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAE---L 280
E + V +T +I GY R G A+ L N+M + +D V+ L + L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 281 GDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----S 336
G+ + + E L S +L I LI + G ++ A E+F+ M ++
Sbjct: 462 GE--ADKLFNEMTERALFPDSYTLTI-----LIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQS 365
+++ T++ F K G + A I+ M S
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 121/305 (39%), Gaps = 62/305 (20%)
Query: 82 LLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSF 137
L A K+F E+ P +I GH + + + ++ LF +M+ +++TY+
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
LL G + G + +++ ++ P + L+N G + A RV+DEM
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH---LAEAFRVWDEMI 577
Query: 198 ERNI-----VCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKC 248
+NI +C NSM+ Y R GN +KM+ + +++ T+I G+ R
Sbjct: 578 SKNIKPTVMIC-NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM 636
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISL 308
+A L KM +Q LV + TY
Sbjct: 637 SKAFGLVKKMEE-----EQGGLVPD---------------VFTY---------------- 660
Query: 309 NNALIHMYASCGVIEEAYEVFRWM------PKRSNISWTTMICAFAKQGYANEALAIFEL 362
N+++H + ++EA V R M P RS ++T MI F Q EA I +
Sbjct: 661 -NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS--TYTCMINGFVSQDNLTEAFRIHDE 717
Query: 363 MQSLG 367
M G
Sbjct: 718 MLQRG 722
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 72 LLSFYIASGHLLSAHKVFKEV--KN--PSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
L++ + GHL A +V+ E+ KN P+V + N MI+G+ RS + +M +
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 128 AEPNLLTYSFLLSGCARS-------GLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMA 180
P+ ++Y+ L+ G R GL+++ E+ G G P+VF ++ L+G
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG-----GLVPDVFTYNSI--LHGFC 668
Query: 181 GADFGVEYAQRVFDEMGERNI----VCWNSMLAVYMRCGNVEGARRIFDKMMER 230
+ ++ A+ V +M ER + + M+ ++ N+ A RI D+M++R
Sbjct: 669 RQN-QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 137/300 (45%), Gaps = 23/300 (7%)
Query: 84 SAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
A FKE++ P+V + ++ G S + L + M + PN++TYS LL
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER 199
++G + E +++ ++ P++ ++LIN G+ D ++ A ++FD M +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN--GLCLHD-RIDEANQMFDLMVSK 324
Query: 200 ----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQA 251
++V +N+++ + + VE ++F +M +R N VT+ T+I G+ + G +A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 252 LILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNA 311
F++M + D + L + G+L I E + + L I
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF----EDMQKREMDLDIVTYTT 440
Query: 312 LIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+I G +EEA+ +F + K +++TTM+ +G +E A++ M+ G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 127/278 (45%), Gaps = 19/278 (6%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P + +N +I +++ + F ++ PN++TY+ L++G S + ++
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG----ERNIVCWNSMLAV 210
++ PNV + L++ + G V A+ +F+EM + +IV ++S++
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGK---VLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 211 YMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
++ A ++FD M+ + +VV++ T+I G+ + + + LF +M + + +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
V+ + + GD+ + + ++ G S I N L+ G +E+A
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMD--FFGISPD--IWTYNILLGGLCDNGELEKAL 420
Query: 327 EVFRWMPKR----SNISWTTMICAFAKQGYANEALAIF 360
+F M KR +++TT+I K G EA ++F
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 130/296 (43%), Gaps = 31/296 (10%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K+ K P ++ G R +V L ++M +P+++ Y+ ++ ++
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER---NIVC 203
+ + + G PNV T L+N G+ + + A+ + D + ++ N++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVN--GLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 204 WNSMLAVYMRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMR 259
++++L +++ G V A+ +F++M ++ ++VT++++I G + + +A +F+ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 260 RAHVDLDQVS---LVAALSACAELGD-LRLGRWIHTYIEEKLSGKSQSLLISLN---NAL 312
D VS L+ + D ++L R + SQ L+S N L
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-----------SQRGLVSNTVTYNTL 371
Query: 313 IHMYASCGVIEEAYEVFRWMP--KRSNISWT--TMICAFAKQGYANEALAIFELMQ 364
I + G +++A E F M S WT ++ G +AL IFE MQ
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 127/287 (44%), Gaps = 54/287 (18%)
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
NP V ++ +I + ++ L+++M +P+++TYS L++G L E +Q
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLA 209
+ ++ +P+V LI + VE VF EM +R N V +N ++
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKR---VEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 210 VYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
+ G+ + A+ IF +M+ N++T+ T++ G +NGK +A+++F ++R+
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS---- 495
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
++ I+TY N +I G +E+
Sbjct: 496 ------------------KMEPTIYTY-----------------NIMIEGMCKAGKVEDG 520
Query: 326 YEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
+++F + K +++ TMI F ++G EA A+F+ M+ G
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 16/267 (5%)
Query: 109 RSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF 168
RS+ P +L M+ EPN++T S LL+G S + E + ++ V GY PN
Sbjct: 129 RSQLPLALAVLGKMMKLG-YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 169 MKTNLIN-LYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM 227
LI+ L+ A + R+ + + ++V + ++ + G+ + A + +KM
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 228 ----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD- 282
+E V+ + T+I G + AL LF +M + + V+ + +S G
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNI 338
R + IE K++ + +ALI + G + EA +++ M KR S +
Sbjct: 308 SDASRLLSDMIERKINPDVFTF-----SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 339 SWTTMICAFAKQGYANEALAIFELMQS 365
+++++I F +EA +FE M S
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVS 389
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 48/325 (14%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K+ K P++ + ++ G+ S+ ++V L +QM +PN +T++ L+ G
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 147 LLREGEQVHGRVLVNGYYPNVF----------------MKTNLINLYGMAGADFGV---- 186
E + R++ G P++ + NL+N + GV
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 187 ------------EYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
+ A +F EM + N+V ++S+++ G A R+ M+ER
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 231 ----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
+V T++ +I + + GK +A L+++M + +D V+ + ++ L
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTT 342
+ + ++ K + N LI + +EE EVFR M +R + +++
Sbjct: 381 KQMFEFMVSKHCFPD----VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 343 MICAFAKQGYANEALAIFELMQSLG 367
+I + G + A IF+ M S G
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDG 461
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 79 SGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
+G A ++FKE+ + P++ +N ++ G ++ K++++F ++ ++ EP + T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
Y+ ++ G ++G + +G + + + G P+V +I+ + G+ E A +F
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK---EEADALFK 560
Query: 195 EMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKM 227
EM E N C+N+++ +R G+ E + + +M
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 137/305 (44%), Gaps = 25/305 (8%)
Query: 81 HLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
H+ A +FKE++ P+V ++ +I + L + M + PNL+T++
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
L+ + G E E++H ++ P++F +LIN + M ++ A+++F+ M
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR---LDKAKQMFEFM 315
Query: 197 GER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKC 248
+ ++ +N+++ + + VE +F +M R + VT+TT+I G +G C
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQ-SLLIS 307
A +F +M V D ++ L G L + Y++ KS+ L I
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-----KSEIKLDIY 430
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELM 363
+ +I G +++ +++F + K + +++ TMI + EA A+ + M
Sbjct: 431 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 490
Query: 364 QSLGA 368
+ G
Sbjct: 491 KEDGP 495
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 130/321 (40%), Gaps = 40/321 (12%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K+ K PS+ + ++ G+ + +V L +QM P+ +T++ L+ G
Sbjct: 69 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 128
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLIN-LYGMAGADFGVEYAQRVFDEMGERNIVCWN 205
E + R++ G PN+ ++N L D ++ E ++V +N
Sbjct: 129 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 188
Query: 206 SMLAVYMRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRA 261
+++ + +V+ A +F +M + NVVT++++I+ G+ A L + M
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248
Query: 262 HVDLDQVSLVAALSACAELGDLRLGRWIH-------------TY--------IEEKLSGK 300
++ + V+ A + A + G +H TY + ++L
Sbjct: 249 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 308
Query: 301 SQ--SLLISLN--------NALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICA 346
Q ++S + N LI + +E+ E+FR M R +++TT+I
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368
Query: 347 FAKQGYANEALAIFELMQSLG 367
G + A +F+ M S G
Sbjct: 369 LFHDGDCDNAQKVFKQMVSDG 389
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 17/286 (5%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ +N +I G+ ++ +P KS + +M+A EP+L+T++ LL G ++G++ + E V
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 155 HGRVLVNGYYPNVFMKTNLINLYG---MAGADFGVEYAQRVFDEMGERNIVCWNSMLAVY 211
+ G+ P+ F + L + Y A A GV + D + N + +L
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV--YETAVDSGVKMNAYTCSILLNAL 364
Query: 212 MRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
+ G +E A I + M + N V + TMI GY R G A + M + + D
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 268 VSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYE 327
++ + ELG++ + KL G S S + N LI Y ++ ++
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKM--KLKGVSPS--VETYNILIGGYGRKYEFDKCFD 480
Query: 328 VFRWMPKRSN----ISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
+ + M +S+ T+I K EA + M+ G +
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 36/313 (11%)
Query: 80 GHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
G + +A K ++K +PSV +N +I G+ R K + +M PN+++Y
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
L++ + L E + V + G P V + LI+ G +E A R E
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK---IEDAFRFSKE 554
Query: 196 MGER----NIVCWNSMLAVYMRCGNVEGAR----RIFDKMMERNVVTWTTMIAGYARNGK 247
M ++ N+V +N+++ G + A I K ++ +V T+ ++I+GY G
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGK---SQSL 304
++ + L+ +M+R+ + + +S C + G + E+L G+ L
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG---------IELTERLFGEMSLKPDL 665
Query: 305 LISLNNALIHMYASCGVIEEAYEVFRWMPKRS----NISWTTMICAFAKQGYANEALAIF 360
L+ N ++H YA G +E+A+ + + M ++S ++ ++I K G E +
Sbjct: 666 LVY--NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE---VR 720
Query: 361 ELMQSLGANEAKP 373
L+ + A E +P
Sbjct: 721 SLIDEMNAREMEP 733
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 40/227 (17%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
L++ LL A V +++++ P V ++N +I G + +M
Sbjct: 500 LINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAG------ 181
E NL+TY+ L+ G + +G L E E + + G P+VF +LI+ YG AG
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619
Query: 182 -------------------------ADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCG 215
G+E +R+F EM + +++ +N +L Y G
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHG 679
Query: 216 NVEGARRIFDKMMERNV----VTWTTMIAGYARNGKCRQALILFNKM 258
++E A + +M+E+++ T+ ++I G + GK + L ++M
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS ++ + I+ + K + LFN+M+ P++ Y+ L+ G + + + EQ+
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAG-ADFGVEYAQRVFDEMGERNIVCWNSMLAVYMR 213
+L P++ LI+ Y AG + + +R+ + E +++ +N++L +
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 214 CGNVEGARRIFDKMMERNVV----TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
G VE A + +M + V T++ + GY+ N K AL ++ + V ++ +
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 270 LVAALSACAELGDLRLGRWI 289
L+A + G + I
Sbjct: 357 CSILLNALCKEGKIEKAEEI 376
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 156/337 (46%), Gaps = 27/337 (8%)
Query: 21 LIPANTITTSRILQQHLFHLLQ----SCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFY 76
LI T +++ LF +L S +K ++ ++ +G Y+ LL
Sbjct: 153 LIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDAL 212
Query: 77 IASGHLLSAHKVFKEVKN---PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLL 133
+G + A KVF++++ P++ + ++ G R ++ + QM+ A EP+++
Sbjct: 213 CKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV 272
Query: 134 TYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVF 193
++ LLSG A +G + + + + G+ PNV T LI + + ++ A RVF
Sbjct: 273 VFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQ--ALCRTEKRMDEAMRVF 330
Query: 194 DEMG----ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV----VTWTTMIAGYARN 245
EM E +IV + ++++ + + G ++ + D M ++ V VT+ ++ + +
Sbjct: 331 VEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
Query: 246 GKCRQALILFNKMRR--AHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEK-LSGKSQ 302
+ + L L KM+R H DL ++V L AC +LG+++ + +E LS
Sbjct: 391 EQFEECLELIEKMKRRGCHPDLLIYNVVIRL-AC-KLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 303 SLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS 339
+ +I +N + S G + EA F+ M R S
Sbjct: 449 TFVIMING-----FTSQGFLIEACNHFKEMVSRGIFS 480
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 142/314 (45%), Gaps = 46/314 (14%)
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+P+V ++ +I G + K+ LF +M N TY+ L++G ++G+ ++G +
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLA 209
++ ++ +G +PN++ ++N G + A +VFDEM ER NIV +N+++
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGR---TKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 210 VYMRCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDL 265
R + A ++ D+M + N++T+ T+I G+ GK +AL L ++ +
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 266 DQVSLVAALSACAELGDLRLGRWIHTYIEE---KLSGKSQSLLIS--------------- 307
V+ +S GD + +EE K S + ++LI
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 308 -------------LNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICAFAKQ 350
+ LIH + G + EA +F+ M ++ + + + TMI + K+
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 351 GYANEALAIFELMQ 364
G + AL + + M+
Sbjct: 492 GSSYRALKLLKEME 505
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 147/324 (45%), Gaps = 16/324 (4%)
Query: 56 QIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNP---SVTLWNQMIRGHARSES 112
++V +GF S LL+F + S F E K+ V + +I+G +
Sbjct: 119 EMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGE 178
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
KS L ++ PN++ Y+ L+ GC + G + + + + + G N T
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 173 LIN-LYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER- 230
LIN L+ G E +++ ++ N+ +N ++ + G + A ++FD+M ER
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 231 ---NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
N+VT+ T+I G R K +A + ++M+ ++ + ++ + +G +LG+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG--KLGK 356
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTM 343
+ + K G S SL+ N L+ + G A ++ + M +R S +++T +
Sbjct: 357 ALSLCRDLKSRGLSPSLVTY--NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 344 ICAFAKQGYANEALAIFELMQSLG 367
I FA+ +A+ + M+ LG
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELG 438
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 82 LLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSF 137
L A+KV ++K NP++ +N +I G K++ L +++ P+L+TY+
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 138 LLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG 197
L+SG R G ++ + G P+ T LI+ + A +D +E A ++ M
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF--ARSD-NMEKAIQLRLSME 435
Query: 198 ERNIV----CWNSMLAVYMRCGNVEGARRIFDKMMERNV----VTWTTMIAGYARNGKCR 249
E +V ++ ++ + G + A R+F M+E+N V + TMI GY + G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 250 QALILFNKMRRAHV 263
+AL L +M +
Sbjct: 496 RALKLLKEMEEKEL 509
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 11/181 (6%)
Query: 72 LLSFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
L+S + G A K+ KE++ PS + +I ARS++ K++ L M
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVE 187
P++ TYS L+ G G + E ++ ++ PN + +I Y G+ +
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY--- 495
Query: 188 YAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYA 243
A ++ EM E+ N+ + M+ V + + A R+ +KM++ + T++++ +
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Query: 244 R 244
R
Sbjct: 556 R 556
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 138/305 (45%), Gaps = 25/305 (8%)
Query: 81 HLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
H+ A +FKE++ P+V ++ +I + L + M + PNL+T++
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
L+ + G E E+++ ++ P++F +L+N + M ++ A+++F+ M
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR---LDKAKQMFEFM 391
Query: 197 GER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKC 248
+ ++V +N+++ + + VE +F +M R + VT+TT+I G +G C
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 249 RQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQ-SLLIS 307
A +F +M V D ++ L G L + Y++ KS+ L I
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-----KSEIKLDIY 506
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELM 363
+ +I G +++ +++F + K + +++ TMI + EA A+ + M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 364 QSLGA 368
+ G
Sbjct: 567 KEDGP 571
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P V +N +I+G +S+ LF +M + +TY+ L+ G G ++V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAV 210
+++ +G P++ + L++ G +E A VFD M + +I + +M+
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGK---LEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Query: 211 YMRCGNVEGARRIFD----KMMERNVVTWTTMIAGYARNGKCRQALILFNKMR------- 259
+ G V+ +F K ++ NVVT+ TMI+G ++A L KM+
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 260 --------RAHV-DLDQVS---LVAALSACAELGD 282
RAH+ D D+ + L+ + +C +GD
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 129/325 (39%), Gaps = 48/325 (14%)
Query: 87 KVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K+ K PS+ + ++ G+ + +V L +QM P+ +T++ L+ G
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 147 LLREGEQVHGRVLVNGYYPNVF----------------MKTNLINLYGMAGADFG----- 185
E + R++ G PN+ + NL+N A +
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 186 -----------VEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER 230
V+ A +F EM + N+V ++S+++ G A ++ M+E+
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 231 ----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLG 286
N+VT+ +I + + GK +A L++ M + +D D + + ++ L
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 287 RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTT 342
+ + ++ K + N LI + +E+ E+FR M R +++TT
Sbjct: 385 KQMFEFMVSKDCFPD----VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 343 MICAFAKQGYANEALAIFELMQSLG 367
+I G + A +F+ M S G
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDG 465
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 54/318 (16%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ +N+++ A+ + + L +M+ E L TY+ L++ R + +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 155 HGRVLVNGYYPNVFMKTNLINLY--GMAGADFGVEYAQRVFDEMGER-NIVCWNSMLAVY 211
G+++ GY P++ ++L+N Y G +D Q V EMG R + + + +++
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV--EMGYRPDTITFTTLIHGL 200
Query: 212 MRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
A + D+M++R N+VT+ ++ G + G AL L NKM A ++ D
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 268 V---SLVAALSACAELGD-LRL--------------------------GRW------IHT 291
V +++ +L + D L L GRW +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS----NISWTTMICAF 347
IE+K++ L++ NALI + G EA +++ M KRS ++ +++ F
Sbjct: 321 MIEKKINPN----LVTF-NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 348 AKQGYANEALAIFELMQS 365
++A +FE M S
Sbjct: 376 CMHDRLDKAKQMFEFMVS 393
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 123/257 (47%), Gaps = 12/257 (4%)
Query: 115 KSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLI 174
K++ F +M P+ +TYS +L ++SG + E ++ R + G+ P+ + L
Sbjct: 239 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 298
Query: 175 NLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMME---- 229
++G AG G+ Y + M + N+V +N++L R G AR +F++M+E
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 358
Query: 230 RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWI 289
N T T ++ Y + R AL L+ +M+ +D + L+ CA++G +
Sbjct: 359 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 290 HTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK---RSNI-SWTTMIC 345
++E + + + + A++++Y S G E+A E+F M K + N+ T ++
Sbjct: 419 FNDMKESVQCRPDNFSYT---AMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQ 475
Query: 346 AFAKQGYANEALAIFEL 362
K ++ + +F+L
Sbjct: 476 CLGKAKRIDDVVYVFDL 492
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 139/306 (45%), Gaps = 41/306 (13%)
Query: 21 LIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASG 80
L+P + +T S IL + +S K + LS ++ + V G+ + + L + +G
Sbjct: 252 LMP-DEVTYSAILDVYS----KSGKVEEVLS-LYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 81 HLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
V +E+K+ P+V ++N ++ R+ P + LFN+M A PN T +
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV-EYAQRVFDE 195
L+ ++ R+ Q+ + + + + L+N+ AD G+ E A+R+F++
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNM----CADIGLEEEAERLFND 421
Query: 196 MGERNIVC------WNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARN 245
M E ++ C + +ML +Y G E A +F++M++ NV+ T ++ +
Sbjct: 422 MKE-SVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKA 480
Query: 246 GKCRQALILFNKMRRAHVDLDQ------VSLVA---------ALSACAELGDLRLGRWIH 290
+ + +F+ + V D +S++A + AC E + +L +++
Sbjct: 481 KRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVN 540
Query: 291 TYIEEK 296
++EK
Sbjct: 541 LIVDEK 546
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 23/305 (7%)
Query: 79 SGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
G L +A +F E++ + +N +I G + L M + PN++T
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
+S L+ + G LRE +Q+ ++ G PN +LI+ + +E A ++ D
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR---LEEAIQMVD 392
Query: 195 EM----GERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNG 246
M + +I+ +N ++ Y + ++ +F +M R N VT+ T++ G+ ++G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
K A LF +M V D VS L + G+L I IE+ L I
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK----SKMELDI 508
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFEL 362
+ +IH + +++A+++F +P K ++ MI ++ ++A +F
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 363 MQSLG 367
M G
Sbjct: 569 MTEEG 573
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 31/259 (11%)
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
EP+ + ++ LL+G + E ++ R++ G+ P + L+N + G V
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK---VSD 211
Query: 189 AQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNV----VTWTTMIA 240
A + D M E N V + +L V + G A + KM ERN+ V ++ +I
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 241 GYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRW------IHTYIE 294
G ++G A LFN+M D ++ + G GRW + I+
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG-----GFCNAGRWDDGAKLLRDMIK 326
Query: 295 EKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICAFAKQ 350
K+S + + LI + G + EA ++ + M +R + I++ ++I F K+
Sbjct: 327 RKISPNVVTF-----SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 351 GYANEALAIFELMQSLGAN 369
EA+ + +LM S G +
Sbjct: 382 NRLEEAIQMVDLMISKGCD 400
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/380 (18%), Positives = 159/380 (41%), Gaps = 54/380 (14%)
Query: 35 QHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAH----KVFK 90
LF + K + + + Q+ G + Y L+ +++ + L A K+ K
Sbjct: 92 NRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMK 151
Query: 91 EVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLRE 150
P ++N ++ G +++ L ++M +P L+T + L++G +G + +
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 151 GEQVHGRVLVNGYYPNVFMKTNLINLYGMAG----------------------------- 181
+ R++ G+ PN ++N+ +G
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 182 ---ADFGVEYAQRVFDEMG----ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER---- 230
D ++ A +F+EM + +I+ +N+++ + G + ++ M++R
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSA-CAELGDLRLGRWI 289
NVVT++ +I + + GK R+A L +M + + + ++ + + C E RL I
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE---NRLEEAI 388
Query: 290 HTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTMIC 345
++ +S +++ N LI+ Y I++ E+FR M R + +++ T++
Sbjct: 389 Q-MVDLMISKGCDPDIMTF-NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 346 AFAKQGYANEALAIFELMQS 365
F + G A +F+ M S
Sbjct: 447 GFCQSGKLEVAKKLFQEMVS 466
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 16/281 (5%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P+V +N++ A+++ + L QM + ++ T S +++ R L
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 155 HGRVLVNGYYPNVFMKTNLIN-LYGMAGADFGVEYAQRVFDEMGER-NIVCWNSMLAVYM 212
G+++ GY P+ + L+N L +E R+ EMG + ++ N+++
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV-EMGHKPTLITLNTLVNGLC 204
Query: 213 RCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
G V A + D+M+E N VT+ ++ ++G+ A+ L KM ++ LD V
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 269 SLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEV 328
+ + G L + + E ++ G ++ N LI + + G ++ ++
Sbjct: 265 KYSIIIDGLCKDG--SLDNAFNLFNEMEIKGFKADIITY--NTLIGGFCNAGRWDDGAKL 320
Query: 329 FRWMPKR----SNISWTTMICAFAKQGYANEALAIF-ELMQ 364
R M KR + ++++ +I +F K+G EA + E+MQ
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 156/378 (41%), Gaps = 50/378 (13%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVF----KEV 92
L H C L + + +++ G+ LL + + A + K
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 93 KNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
P+V ++N +I G ++ ++ L N+M +++TY+ LL+G SG +
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM----GERNIVCWNSML 208
++ ++ P+V T LI+++ G ++ AQ ++ EM + N V +NS++
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQG---NLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 209 AVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVD 264
G + A++ FD M + NVVT+ T+I+G+ + + + LF +M +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 265 LDQVSLVAALSACAELGDLRLGRWIHTYIEEK-----------------LSGKSQSLLIS 307
D + + ++G LR+ I ++ + ++G+ +S L+
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 308 LN--------------NALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAK 349
+ N +IH +E+A+E+F +P K ++T MI K
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 350 QGYANEALAIFELMQSLG 367
G EA + M+ G
Sbjct: 469 NGPRREADELIRRMKEEG 486
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 143/324 (44%), Gaps = 25/324 (7%)
Query: 61 GFSQKSYILAKLLSFYIASGHLLSAHKVF-----KEVKNPSVTLWNQMIRGHARSESPRK 115
GF I +++ + L +A +VF K ++ +VT +N +I G + S
Sbjct: 708 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT-YNTLISGLSNSGRWTD 766
Query: 116 SVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN 175
+ L M + +PN++ ++ L+ + G L E ++ ++ PNVF +LIN
Sbjct: 767 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 826
Query: 176 LYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
+ + G + A+ +FD M + ++V +N+++ + + VE ++F +M +
Sbjct: 827 GFCIHGC---LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 883
Query: 232 VV----TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
+V T+ T+I GY + GK A +FN+M V D V+ L G +
Sbjct: 884 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA- 942
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNISWTTM 343
+ E L + I N +I ++EA+ +FR + ++ I++ TM
Sbjct: 943 ---LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 999
Query: 344 ICAFAKQGYANEALAIFELMQSLG 367
I ++G EA + M+ G
Sbjct: 1000 ISGLCRKGLQREADKLCRRMKEDG 1023
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 126/295 (42%), Gaps = 35/295 (11%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQ-MRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
PS+ + +++ A ++VI F+Q M +L +++ L+ R L
Sbjct: 69 PSIVDFTRLLTATANLRR-YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALS 127
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG----------ERNIVC 203
V G+++ GY P++ +L++ G R+ D E N+V
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLH---------GFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 204 WNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMR 259
+N+++ + G + A + ++M ++ +VVT+ T++ G +G+ A + M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 260 RAHVDLDQVSLVAALSACAELGDLRLGRWIHT-YIEEKLSGKSQSLLISLNNALIHMYAS 318
+ ++ D V+ A + + G+L + ++ I+ + + + +N +H
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH---- 294
Query: 319 CGVIEEAYEVFRWMPKRSN----ISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
G + +A + F M + +++ T+I F K +E + +F+ M G N
Sbjct: 295 -GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 124/257 (48%), Gaps = 15/257 (5%)
Query: 40 LLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----P 95
LL S L + + + +V+ GF + +++ G +L + +E++ P
Sbjct: 233 LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP 292
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
+ + ++ ++ R ++ L++QM +L+ Y+ L+ G ++G LRE E+
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVY 211
+L + PNV T L++ AG + A+ + +M E+ N+V ++SM+ Y
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAG---DLSSAEFIITQMLEKSVIPNVVTYSSMINGY 409
Query: 212 MRCGNVEGARRIFDKMMERNVV----TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
++ G +E A + KM ++NVV T+ T+I G + GK A+ L +MR V+ +
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 469
Query: 268 VSLVAALSACAELGDLR 284
L A ++ +G ++
Sbjct: 470 YILDALVNHLKRIGRIK 486
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 129/285 (45%), Gaps = 20/285 (7%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P +N +I G + + ++ L +++ +E NL+T++ LLS L E+
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEI----SELNLITHTILLSSYYN---LHAIEEA 246
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMR 213
+ ++++G+ P+V +++IN G R +EM N V + +++ +
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 214 CGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
A ++ +M+ R ++V +T ++ G + G R+A F + + + V+
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVT 366
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVF 329
A + + GDL +I T + E KS + +++I+ Y G++EEA +
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLE----KSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Query: 330 RWMPKRSNI----SWTTMICAFAKQGYANEALAIFELMQSLGANE 370
R M ++ + ++ T+I K G A+ + + M+ +G E
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEE 467
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 137/350 (39%), Gaps = 70/350 (20%)
Query: 15 QMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLS 74
QM+L E+ P +TT RI K + + H ++ +G + L++
Sbjct: 633 QMMLMEIHP--NLTTYRIF----LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686
Query: 75 FYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEP 130
G A V +++ P +N ++ G+ RK++ ++ M A P
Sbjct: 687 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 746
Query: 131 NLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQ 190
N+ TY+ ++ G + +GL++E ++ + G P+ F
Sbjct: 747 NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDF---------------------- 784
Query: 191 RVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVV----TWTTMIAGYARNG 246
+N++++ + GN++G+ I+ +M+ +V T+ +I+ +A G
Sbjct: 785 ------------TYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
K QA L +M + V + + +S +L H +E
Sbjct: 833 KMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL-------CTHPDVE------------ 873
Query: 307 SLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAFAKQGYANEA 356
N +++ + G+++E E ++P I W + AF+K G +A
Sbjct: 874 -WNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWIS--AAFSKPGMKVDA 920
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 21/268 (7%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
PS+ N ++ + +++ + NQM E PNL TY L ++ +
Sbjct: 606 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKT 665
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAV 210
H +L G + + LI G + A V +M R + V +NS++
Sbjct: 666 HETLLSYGIKLSRQVYNTLIATLCKLGM---TKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Query: 211 YMRCGNVEGARRIFDKMME----RNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
Y +V A + MME NV T+ T+I G + G ++ ++M+ + D
Sbjct: 723 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782
Query: 267 QVSLVAALSACAELGDLRLGRWIHT-YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEA 325
+ A +S A++G+++ I+ I + L K+ S N LI +A+ G + +A
Sbjct: 783 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKT-----STYNVLISEFANVGKMLQA 837
Query: 326 YEVFRWMPKR----SNISWTTMICAFAK 349
E+ + M KR + ++ TMI K
Sbjct: 838 RELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/426 (19%), Positives = 153/426 (35%), Gaps = 92/426 (21%)
Query: 13 SYQMLLEELIPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKL 72
S+ + IP + T+ I Q+ L KT Y+S HT ++ ++ Y A+
Sbjct: 21 SFSSIKRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAART 80
Query: 73 LSFYIASGHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSV-ILFNQMRAAEAEPN 131
LS G + P LWN +I + V +++++M A P+
Sbjct: 81 LSAMCTFGVV------------PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPD 128
Query: 132 L--------------------------------LTYSFLLSGCARSGLLREGEQVHGRVL 159
+ +TY+ ++SG GL E Q ++
Sbjct: 129 VFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMV 188
Query: 160 VNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEG 219
G P+ LI+ + G A+ + DE+ E N++ +L+ Y +E
Sbjct: 189 KMGILPDTVSYNTLIDGFCKVG---NFVRAKALVDEISELNLITHTILLSSYYNLHAIEE 245
Query: 220 ARR------------IFDKMMER------------------------NVVTWTTMIAGYA 243
A R F ++ R N VT+TT++
Sbjct: 246 AYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF 305
Query: 244 RNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
+ R AL L+++M + +D V + + GDLR + E +Q
Sbjct: 306 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE----DNQV 361
Query: 304 LLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI----SWTTMICAFAKQGYANEALAI 359
+ AL+ G + A + M ++S I ++++MI + K+G EA+++
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 360 FELMQS 365
M+
Sbjct: 422 LRKMED 427
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 23/303 (7%)
Query: 80 GHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTY 135
G + +A +F+E+K P +N MI G + +V F +M+ EP+++TY
Sbjct: 144 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 203
Query: 136 SFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDE 195
+ L++ + G L G + + + NG PNV + L++ + G ++ A + + +
Sbjct: 204 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM---MQQAIKFYVD 260
Query: 196 MGERNIV----CWNSMLAVYMRCGNVEGARRIFDKMM----ERNVVTWTTMIAGYARNGK 247
M +V + S++ + GN+ A R+ ++M+ E NVVT+T +I G +
Sbjct: 261 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 320
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLIS 307
++A LF KM A V + S A + + + + R + E K G LL
Sbjct: 321 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN--MDRALELLNELKGRGIKPDLL-- 376
Query: 308 LNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICAFAKQGYANEALAIFELM 363
L I S IE A V M K +++ +TT++ A+ K G E L + + M
Sbjct: 377 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436
Query: 364 QSL 366
+ L
Sbjct: 437 KEL 439
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 32/334 (9%)
Query: 57 IVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSES 112
+ + GF + L S I G L A + F ++K P N ++ A+
Sbjct: 55 VCVPGFG----VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGK 110
Query: 113 PRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
F M A A P + TY+ ++ + G + + + G P+ +
Sbjct: 111 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNS 170
Query: 173 LINLYGMAGA-DFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM---- 227
+I+ +G G D V + + + D E +++ +N+++ + + G + + +M
Sbjct: 171 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 230
Query: 228 MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDL---- 283
++ NVV+++T++ + + G +QA+ + MRR + ++ + + + A ++G+L
Sbjct: 231 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 290
Query: 284 RLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI----S 339
RLG E L + +++ ALI ++EA E+F M I S
Sbjct: 291 RLGN-------EMLQVGVEWNVVTY-TALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 342
Query: 340 WTTMICAFAKQGYANEALAIFELMQSLGANEAKP 373
+ +I F K + AL EL+ L KP
Sbjct: 343 YNALIHGFVKAKNMDRAL---ELLNELKGRGIKP 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 138/316 (43%), Gaps = 26/316 (8%)
Query: 70 AKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRA 125
+ L+ + G + A K + +++ P+ + +I + + + + L N+M
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298
Query: 126 AEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG 185
E N++TY+ L+ G + ++E E++ G++ G PN+ LI +G A
Sbjct: 299 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI--HGFVKAK-N 355
Query: 186 VEYAQRVFDEMGERNI----VCWNSMLAVYMRCGNVEGARRIFDKMME----RNVVTWTT 237
++ A + +E+ R I + + + + +E A+ + ++M E N + +TT
Sbjct: 356 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 415
Query: 238 MIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKL 297
++ Y ++G + L L ++M+ +++ V+ + + + I
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 475
Query: 298 SGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM------PKRSNISWTTMICAFAKQG 351
++ + + + A+I +E A +F M P R+ ++T+++ KQG
Sbjct: 476 GLQANAAIFT---AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT--AYTSLMDGNFKQG 530
Query: 352 YANEALAIFELMQSLG 367
EALA+ + M +G
Sbjct: 531 NVLEALALRDKMAEIG 546
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 112/229 (48%), Gaps = 17/229 (7%)
Query: 99 LWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRV 158
++ ++ + +S +P + + L ++M+ + E ++T+ L+ G ++ L+ + R+
Sbjct: 412 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 471
Query: 159 LVN-GYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIV----CWNSMLAVYMR 213
+ G N + T +I+ G+ D VE A +F++M ++ +V + S++ +
Sbjct: 472 SNDFGLQANAAIFTAMID--GLC-KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 528
Query: 214 CGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVS 269
GNV A + DKM M+ +++ +T+++ G + + ++A +M + D+V
Sbjct: 529 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 588
Query: 270 LVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYAS 318
++ L ELG + + +Y+ K Q L +NAL ++Y+
Sbjct: 589 CISVLKKHYELGCIDEAVELQSYLM-----KHQLLTSDNDNALPNIYSD 632
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/375 (19%), Positives = 157/375 (41%), Gaps = 55/375 (14%)
Query: 37 LFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPS 96
+ +L+ + + S ++ ++ HG +L +G L K++ E+K +
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 97 VTL----WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGE 152
+ +N +I G +++ ++ MR + +++ L+ G + GL +
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 153 QVHGRVLVNGYYPNVFMKTNLINLYGMAGADFG-VEYAQRVFDEMGERNIVCWNSMLAVY 211
V +L G YP T+ N+Y A DFG ++ A+ + M ++V +N+++ Y
Sbjct: 329 GVTDEMLNAGIYPT----TSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGY 384
Query: 212 MR-----------------------------------CGNVEGARRIFDKMMER----NV 232
++ GN+EGA+R+ ++M + +V
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDV 444
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
+T+TT++ G+ +NG A ++++M R + D + LGD +H
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH-- 502
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYE----VFRWMPKRSNISWTTMICAFA 348
EE ++ + +++ N I G + +A E +FR ++++TT+I +
Sbjct: 503 -EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 349 KQGYANEALAIFELM 363
+ G A +++ M
Sbjct: 562 ENGQFKMARNLYDEM 576
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 58/321 (18%)
Query: 80 GHLLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLL 139
G + A ++ + P V +N ++ G+ + ++ +LF+ +RA + P+++TY+ L+
Sbjct: 357 GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 140 SGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM--- 196
G SG L +++ + +P+V T L+ + G + A V+DEM
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNG---NLSMATEVYDEMLRK 473
Query: 197 --------------GE-----------------------RNIVCWNSMLAVYMRCGN--- 216
GE ++ +N + + GN
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533
Query: 217 -VEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALS 275
+E R+IF + + VT+TT+I GY NG+ + A L+++M R + ++ +
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
A+ G RL + E K G +++ +NAL++ G I+EAY M +
Sbjct: 594 GHAKAG--RLEQAFQYSTEMKKRGVRPNVMT--HNALLYGMCKAGNIDEAYRYLCKMEEE 649
Query: 336 ----SNISWTTMI---CAFAK 349
+ S+T +I C F K
Sbjct: 650 GIPPNKYSYTMLISKNCDFEK 670
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 164/366 (44%), Gaps = 34/366 (9%)
Query: 17 LLEELIPANTITTSRILQQHLFHLLQS-CK--TLKYLSQIHTQIVIHGFSQKSYILAKLL 73
L L ++ + +H+ L+ S C +LK+L+ + V G++ ++
Sbjct: 8 FLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYL----VSRGYTPHRSSFNSVV 63
Query: 74 SFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEA- 128
SF G + A + + P V +N +I GH R+ R + ++ +RA+
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 129 --EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGV 186
+P++++++ L +G ++ +L E V+ V++ PNV + I+ + +G +
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGE---L 179
Query: 187 EYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKM----MERNVVTWTTM 238
+ A + F M N+V + ++ Y + G++E A ++ +M M NVVT+T +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 239 IAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLS 298
I G+ + G+ ++A ++++M V+ + + + + GD K+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA----KML 295
Query: 299 GKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNIS----WTTMICAFAKQGYAN 354
+ L I+ +I G ++EA E+ M K + +TTM+ A+ K G
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 355 EALAIF 360
A+ ++
Sbjct: 356 AAVNMY 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 159/347 (45%), Gaps = 71/347 (20%)
Query: 76 YIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPN 131
+ SG L A K F +K +P+V + +I G+ ++ +V L+ +MR N
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 132 LLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGAD-------- 183
++TY+ L+ G + G ++ E+++ R++ + PN + T +I+ + G
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 184 -------------FGV-----------EYAQRVFDEMGERNI----VCWNSMLAVYMRCG 215
+GV + A + ++M + ++ V + +M+ Y + G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 216 NVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLV 271
++ A ++ K++ER +VV +TMI G A+NG+ +A++ F + +A+ D+ L+
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC-IEKAN-DVMYTVLI 410
Query: 272 AALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYAS-----C--GVIEE 324
AL C E G +I +E S S++ L+ MY S C G + +
Sbjct: 411 DAL--CKE------GDFIE--VERLFSKISEAGLVPDK----FMYTSWIAGLCKQGNLVD 456
Query: 325 AYEVFRWMPKR----SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
A+++ M + +++TT+I A +G EA +F+ M + G
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSG 503
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 123/280 (43%), Gaps = 12/280 (4%)
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
+P+V ++ I +S + ++ F+ M+ PN++T++ L+ G ++G L
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGA-DFGVEYAQRVFDEMGERNIVCWNSMLAVYM 212
++ + NV T LI+ + G E R+ ++ E N + + +++ +
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 213 RCGNVEGARRIFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
+ G+ + A + KM M ++ + +I+G NGK ++A + M ++ + D V
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 269 SLVAALSACAELGDLRLG-RWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYE 327
++A + G ++ H IE +L + +I A G + EA
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL-----STMIDGIAKNGQLHEAI- 393
Query: 328 VFRWMPKRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
V+ + K +++ +T +I A K+G E +F + G
Sbjct: 394 VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAG 433
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 20/287 (6%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P+V +N +I G+ + +V + M + + PN TY+ L+ G +S + + V
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGV 449
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIV----CWNSMLAV 210
++L P+V +LI+ +G + A R+ M +R +V + SM+
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSG---NFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 211 YMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
+ VE A +FD + ++ NVV +T +I GY + GK +A ++ KM + +
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
++ A + G L+ T +EEK+ +S + LIH G + AY
Sbjct: 567 SLTFNALIHGLCADGKLKEA----TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 327 EVFRWM----PKRSNISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
F+ M K ++TT I + ++G +A + M+ G +
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 145/339 (42%), Gaps = 24/339 (7%)
Query: 45 KTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLW 100
K L ++ ++ + G + L+ + + A +F ++K+ P+V +
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 101 NQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLV 160
+I+ SE +++ L +M +PN+ TY+ L+ + ++ G++L
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 161 NGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGN 216
G PNV LIN Y G +E A V + M R N +N ++ Y + N
Sbjct: 387 KGLMPNVITYNALINGYCKRGM---IEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 217 VEGARRIFDKMMER----NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
V A + +KM+ER +VVT+ ++I G R+G A L + M + DQ + +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWM 332
+ + + + + +E+K + + + ALI Y G ++EA+ + M
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPN----VVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 333 PKR----SNISWTTMICAFAKQGYANEALAIFELMQSLG 367
+ +++++ +I G EA + E M +G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
NP+V ++ +I G+ ++ ++ ++ +M + PN LT++ L+ G G L+E
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYA--QRVFDEMGERNIVCWNSMLAVY 211
+ +++ G P V T LI+ + DF Y+ Q++ + + + + + Y
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRL-LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 212 MRCGNVEGARRIFDKMMERNV----VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
R G + A + KM E V T++++I GY G+ A + +MR + Q
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 268 VSLVAALSACAEL 280
+ ++ + E+
Sbjct: 708 HTFLSLIKHLLEM 720
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 15/249 (6%)
Query: 79 SGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
SG+ SA+++ + + P + MI +S+ ++ LF+ + PN++
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
Y+ L+ G ++G + E + ++L PN LI +G+ AD ++ A + +
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI--HGLC-ADGKLKEATLLEE 591
Query: 195 EM---GERNIVCWNSMLA-VYMRCGNVEGARRIFDKMM----ERNVVTWTTMIAGYARNG 246
+M G + V +++L ++ G+ + A F +M+ + + T+TT I Y R G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLI 306
+ A + KMR V D + + + +LG + + + SQ +
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 307 SLNNALIHM 315
SL L+ M
Sbjct: 712 SLIKHLLEM 720
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 115/277 (41%), Gaps = 32/277 (11%)
Query: 120 FNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGM 179
F QM ++ +P+ TY+ + R G L + E + ++ NG P++F ++LI YG
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 180 AG-ADFGVEYAQRVFDEMGERNIVCWNSMLA--VYMRCGNVEGAR--------------- 221
G +F + +R+ D E + + S++ + M+ G +G+
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 222 -RIFDKMMERNVV----TWTTMIAGYARNGKCRQALILFNKMRRAH-VDLDQVSLVAALS 275
+ +KM+E +V ++ +I G G R A +F+ M+R + ++ A LS
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 276 ACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK- 334
C +L + +++ + L S + +Y G E VF+ + +
Sbjct: 805 CCCKLKKHNEAAKV---VDDMICVGHLPQLESCKVLICGLYKK-GEKERGTSVFQNLLQC 860
Query: 335 ---RSNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
++W +I KQG +F +M+ G
Sbjct: 861 GYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGC 897
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 17/226 (7%)
Query: 119 LFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYG 178
++ +M + PN+ TY+ +++G + G + E Q +++ G P+ F T+LI Y
Sbjct: 205 VYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYC 264
Query: 179 MAGADFGVEYAQRVFDEMG----ERNIVCWNSMLAVYMRCGNVEGARRIFDKMMER---- 230
++ A +VF+EM RN V + ++ ++ A +F KM +
Sbjct: 265 QRK---DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD-QVSLVAALSACAELGDLRLGRWI 289
V T+T +I + + +AL L +M + + V S C++ + +
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 290 HTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
+E+ L + NALI+ Y G+IE+A +V M R
Sbjct: 382 GQMLEKGLMPN-----VITYNALINGYCKRGMIEDAVDVVELMESR 422
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 139/314 (44%), Gaps = 50/314 (15%)
Query: 66 SYILAKLLSFYIASGHLLSAHKVFKEVKNPS-----VTLWNQMIRGHARSESPRKSVILF 120
S LA ++ Y G + A VF +N S V +N MI+ + +++ K++ LF
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 121 NQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMA 180
M+ P+ TY+ L A L+ E +++ +L +G P KT
Sbjct: 539 KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC--KT--------- 587
Query: 181 GADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM----MERNVVTWT 236
+ +M+A Y+R G + A +++ M ++ N V +
Sbjct: 588 -----------------------YAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYG 624
Query: 237 TMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEK 296
++I G+A +G +A+ F M V + + L + + A +++G L R ++ +++
Sbjct: 625 SLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDS 684
Query: 297 LSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN---ISWTTMICAFAKQGYA 353
G ++ +N+++ + A G++ EA +F + ++ IS+ TM+ + G
Sbjct: 685 EGGPD----VAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGML 740
Query: 354 NEALAIFELMQSLG 367
+EA+ + E M+ G
Sbjct: 741 DEAIEVAEEMRESG 754
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 58/292 (19%)
Query: 94 NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQ 153
P + MI + R +V L+ M +PN + Y L++G A SG++ E Q
Sbjct: 582 KPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Query: 154 VHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM----GERNIVCWNSMLA 209
+ +G N + T+LI Y G +E A+RV+D+M G ++ NSML+
Sbjct: 642 YFRMMEEHGVQSNHIVLTSLIKAYSKVGC---LEEARRVYDKMKDSEGGPDVAASNSMLS 698
Query: 210 VYMRCGNVEGARRIFDKMMER---NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLD 266
+ G V A IF+ + E+ +V+++ TM+ Y G +A+ + +MR + +
Sbjct: 699 LCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGL--- 755
Query: 267 QVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAY 326
LS C N ++ YA+ G + E
Sbjct: 756 -------LSDCTSF-----------------------------NQVMACYAADGQLSECC 779
Query: 327 EVFRWM--PKRSNISWTTMICAFA---KQGYANEALAIFELMQSLGANEAKP 373
E+F M ++ + W T F K G +EA++ + NEAKP
Sbjct: 780 ELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQ----TAYNEAKP 827
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 156/347 (44%), Gaps = 55/347 (15%)
Query: 45 KTLKYLSQIHT-QIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTLWNQM 103
+L Y+ ++T +VI+ F ++S + L FY ++ K P+V +N M
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFY----------RMLKCGVWPNVVSFNMM 259
Query: 104 IRGHARSESPRKSVILFNQMRAAEAE---PNLLTYSFLLSGCARSGLLREGEQVHGRVLV 160
I G ++ R ++ L +M PN +TY+ +++G ++G L E++ G ++
Sbjct: 260 IDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVK 319
Query: 161 NGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGN 216
+G N L++ YG AG+ + A R+ DEM + N V +NS++ G+
Sbjct: 320 SGVDCNERTYGALVDAYGRAGSS---DEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGD 376
Query: 217 VEGARRIFDKMMERNV----VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVA 272
+EGA + M +N+ T ++ G RNG ++A+ + +R + + LV
Sbjct: 377 IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAV----EFQR---QISEKKLVE 429
Query: 273 ALSACAELGDLRLGRWIHTYIEEKLSGKSQSLL-------ISLN----NALIHMYASCGV 321
+ L +H ++ +K + +L +SL+ LI Y G
Sbjct: 430 DIVCHNTL--------MHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481
Query: 322 IEEAYEVFRWMPKRSNIS----WTTMICAFAKQGYANEALAIFELMQ 364
+E A E++ M K + S + +++ +K+G A A A+ M+
Sbjct: 482 LERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 128/295 (43%), Gaps = 27/295 (9%)
Query: 58 VIHGFSQKS--YILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSE 111
+IH F + ++ + LS ++G +L A +F+E+ P + MI G+
Sbjct: 363 LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLG 422
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
K+ F + + P+L T + L+ C+R G + + E V + G +V
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGE-------RNIVCWNSMLAVYMRCGNVEGARRIF 224
NL++ YG +VF+ + E ++ +N ++ + G ++ A I
Sbjct: 483 NLMHGYGKT------HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 225 DKMMERNVV----TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAEL 280
+++ R V +T +I G+++ G ++A IL+ M + D V+ A L +
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 281 GDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR 335
R+ + I + KL + L N LIH Y S G IE+A E+ M +R
Sbjct: 597 Q--RMEKAIVLF--NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 104/272 (38%), Gaps = 51/272 (18%)
Query: 104 IRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGY 163
I G + P +++ L + R PN+ YS LS +G + + + G
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 164 YPNVFMKTNLINLYGMAG-ADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARR 222
P+ T +I+ Y G D +Y + ++ ++ R G++ A
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 223 IFDKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACA 278
+F M ++ +VVT+ ++ GY + + + L ++MR A + D
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD------------ 512
Query: 279 ELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR--- 335
+ TY N LIH G I+EA E+ + +R
Sbjct: 513 ----------VATY-----------------NILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 336 -SNISWTTMICAFAKQGYANEALAIFELMQSL 366
S +++T +I F+K+G EA ++ M L
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 15/218 (6%)
Query: 79 SGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLT 134
GH + A +F E+ + P V ++ MI RS + L M + P+++T
Sbjct: 89 DGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVT 148
Query: 135 YSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFD 194
+S L++ + G + E E+++G +L G +P ++I+ G D + A+R+ D
Sbjct: 149 FSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMID--GFCKQD-RLNDAKRMLD 205
Query: 195 EMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NVVTWTTMIAGYARNG 246
M + ++V +++++ Y + V+ IF +M R N VT+TT+I G+ + G
Sbjct: 206 SMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
Query: 247 KCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLR 284
A L N M + V + ++ + L++ +LR
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 137/321 (42%), Gaps = 52/321 (16%)
Query: 60 HGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRK 115
G ++ L+S+ G++ A +F E+ +PS + +I G +
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 116 SVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN 175
+ IL N+M++ + ++ L+ G R G++ E ++ + G+ +VF + +
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 176 LYG-MAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKM----MER 230
+ + D ++ R+ + + + V + +++ VY + GNVE A+R+F +M ++
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 231 NVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIH 290
N +T+ MI Y + GK ++A L M +D D +
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS----------------------Y 540
Query: 291 TYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP----KRSNISWTTMICA 346
TY +LIH ++EA +F M ++++++T MI
Sbjct: 541 TY-----------------TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Query: 347 FAKQGYANEALAIFELMQSLG 367
+K G ++EA +++ M+ G
Sbjct: 584 LSKAGKSDEAFGLYDEMKRKG 604
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 126/294 (42%), Gaps = 50/294 (17%)
Query: 119 LFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYG 178
+F +M + + + + + ++ G R G + + +++ V G P + +IN Y
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY- 269
Query: 179 MAGADF-GVEYAQRVFDEMGE-RNIVCWNSMLAVYMRCGNVEGARRIFDKMMER----NV 232
+ DF GVE +V + G N V + ++ + ++ G + A ++FD+M ER +V
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
+T++I+ R G ++A +LF+++ + + A + ++G++ +
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 293 IEEKLSGKSQSLLISLNNALIHMYASCGVIEEA---YEV--------------------- 328
++ K +Q + N LI Y G+++EA Y+V
Sbjct: 390 MQSKGVNITQVVF----NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFN 445
Query: 329 ------------FRWMP---KRSNISWTTMICAFAKQGYANEALAIFELMQSLG 367
FR M K S +S+T +I + K+G EA +F M S G
Sbjct: 446 RLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 96 SVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVH 155
S + +I + + + ++ LF +M + +PN +TY+ ++ + G ++E ++
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 156 GRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNSMLAVYMRCG 215
+ NG P+ + T+LI +G AD V+ A R+F EMG
Sbjct: 528 ANMEANGMDPDSYTYTSLI--HGECIAD-NVDEAMRLFSEMGL----------------- 567
Query: 216 NVEGARRIFDKMMERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQ 267
K +++N VT+T MI+G ++ GK +A L+++M+R +D
Sbjct: 568 ----------KGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDN 609
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 145/331 (43%), Gaps = 48/331 (14%)
Query: 53 IHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHA 108
+ +V G + ++S + G++ A + KE++ P+ + +I G+A
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 109 RSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVF 168
+S R+S+ +F+ MR P + T++ L++G + + ++ + + G N
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 169 MKTNLINLYGMAGADFG--VEYAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDK 226
T ++ Y G D G EY R+ +E + +I + ++L + G ++ A + +
Sbjct: 661 TYTKIMQGYASVG-DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 719
Query: 227 MMERNV----VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGD 282
M RN+ + +I G+AR G +A L +M++ V D + + +SAC++ GD
Sbjct: 720 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 779
Query: 283 LRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNI-SWT 341
+ R T IEE + GV + NI ++T
Sbjct: 780 --MNRATQT-IEE--------------------MEALGV-------------KPNIKTYT 803
Query: 342 TMICAFAKQGYANEALAIFELMQSLGANEAK 372
T+I +A+ +AL+ +E M+++G K
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/320 (18%), Positives = 136/320 (42%), Gaps = 39/320 (12%)
Query: 72 LLSFYIASGHLLSAHKVFKEVK----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
++ FY G + A + F+ ++ P+ ++ +I +A +++ +M+
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 128 AEPNLLTYSFLLSGCARSG-------LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMA 180
E +L+TYS ++ G +++G E +++H + + Y ++ N+
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM---- 430
Query: 181 GADFGVEYAQRVFDEMGERNI----VCWNSMLAVYMRCGNVEGARRIFDKMME----RNV 232
E A+ + EM E I +++M+ Y + + +F ++ E V
Sbjct: 431 ------ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 233 VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTY 292
VT+ +I Y + GK +AL + M+ V + + ++ +L D W + +
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD-----WANAF 539
Query: 293 -IEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPK----RSNISWTTMICAF 347
+ E + + + L N +I + G ++ A + + M K + ++ +I +
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 348 AKQGYANEALAIFELMQSLG 367
AK G +L +F++M+ G
Sbjct: 600 AKSGDMRRSLEVFDMMRRCG 619
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 17 LLEEL----IPANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKL 72
+L+E+ + AN T ++I+Q + + + K +Y +++ + G + L
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYA-SVGDTGKAFEYFTRLQNE----GLDVDIFTYEAL 700
Query: 73 LSFYIASGHLLSAHKVFKEVKNPSVT----LWNQMIRGHARSESPRKSVILFNQMRAAEA 128
L SG + SA V KE+ ++ ++N +I G AR ++ L QM+
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 129 EPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEY 188
+P++ TY+ +S C+++G + Q + G PN+ T LI + A
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS------- 813
Query: 189 AQRVFDEMGERNIVCWNSMLAVYMR 213
+ E+ + C+ M A+ ++
Sbjct: 814 -------LPEKALSCYEEMKAMGIK 831
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 137/333 (41%), Gaps = 31/333 (9%)
Query: 50 LSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVTL----WNQMIR 105
+S + +++ GFS+ +GH +A F E K TL + ++I
Sbjct: 377 MSLVTYSVIVGGFSK--------------AGHAEAADYWFDEAKRIHKTLNASIYGKIIY 422
Query: 106 GHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYP 165
H ++ + ++ L +M + + Y ++ G ++G V R+ G+ P
Sbjct: 423 AHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 166 NVFMKTNLINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIF 224
V LINLY G RV E G + N+ ++ M+ +++ + A +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 225 DKM----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAEL 280
+ M M+ +V+ + +I+ + G +A+ +M++ + + + A+
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 281 GDLRLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMP----KRS 336
GD+R R + + + G + + N LI+ +E+A E+ M +
Sbjct: 603 GDMR--RSLEVFDMMRRCGCVPT--VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 337 NISWTTMICAFAKQGYANEALAIFELMQSLGAN 369
++T ++ +A G +A F +Q+ G +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 691
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 143/312 (45%), Gaps = 17/312 (5%)
Query: 60 HGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKNPSVT------LWNQMIRGHARSESP 113
HG S L+ ++ G + +A +V + + N +V + + +I G + P
Sbjct: 128 HGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKP 187
Query: 114 RKSVILFNQ-MRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTN 172
++ F + + PNL+TY+ L+S + G + E + R+ G+ + +N
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 173 LINLYGMAGADFGVEYAQRVFDEMG-ERNIVCWNSMLAVYMRCGNVEGARRIFDKMM--- 228
I+ Y GA R E G R++V ++ ++ + GNVE A + KM+
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 229 -ERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGR 287
E N++T+T +I G + GK +A +LFN++ +++D+ V + G+L
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 288 WIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSNISWTTMICAF 347
+ +E++ G S+L N +I+ G + EA EV + + I+++T++ ++
Sbjct: 368 SMLGDMEQR--GIQPSILTY--NTVINGLCMAGRVSEADEVSKGVVGDV-ITYSTLLDSY 422
Query: 348 AKQGYANEALAI 359
K + L I
Sbjct: 423 IKVQNIDAVLEI 434
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 133/313 (42%), Gaps = 21/313 (6%)
Query: 60 HGFSQKSYILAKLLSFYIASGHLLSA----HKVFKEVKNPSVTLWNQMIRGHARSESPRK 115
GF + + Y G L+ A ++ ++ N V ++ +I G ++ + +
Sbjct: 236 EGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEE 295
Query: 116 SVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLIN 175
++ L +M EPNL+TY+ ++ G + G L E + R+L G + F+ LI+
Sbjct: 296 ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 176 LYGMAGADFGVEYAQRVFDEMGER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMERN 231
G + A + +M +R +I+ +N+++ G V A + K + +
Sbjct: 356 GICRKG---NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-SKGVVGD 411
Query: 232 VVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHT 291
V+T++T++ Y + L + + A + +D V L A +G ++
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 292 YIEE-KLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRS---NISWTTMICAF 347
+ E L+ + + +I Y G IEEA E+F + K S + + +I A
Sbjct: 472 AMPEMDLTPDTATY-----ATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDAL 526
Query: 348 AKQGYANEALAIF 360
K+G + A +
Sbjct: 527 CKKGMLDTATEVL 539
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 56/244 (22%)
Query: 31 RILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFK 90
R L +L + TL + I I+I+G ++ G L+ A +
Sbjct: 634 RSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKE--------------GFLVKALNLCS 679
Query: 91 EVKNPSVTL----WNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSG 146
K+ VTL +N +I G + +++ LF+ + P+ +TY L+ + G
Sbjct: 680 FAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEG 739
Query: 147 LLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERNIVCWNS 206
L + E++ ++ G P NI+ +NS
Sbjct: 740 LFLDAEKLLDSMVSKGLVP----------------------------------NIIIYNS 765
Query: 207 MLAVYMRCGNVEGARRIFD-KMMER---NVVTWTTMIAGYARNGKCRQALILFNKMRRAH 262
++ Y + G E A R+ KMM R + T ++MI GY + G +AL +F + + +
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKN 825
Query: 263 VDLD 266
+ D
Sbjct: 826 ISAD 829
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 143/323 (44%), Gaps = 21/323 (6%)
Query: 62 FSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSV 117
FS ++ L+ G + A + K V + P++ ++N +I + ++
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 118 ILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLY 177
+LF++M PN +TYS L+ R G L G ++ G +V+ +LIN +
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 178 GMAGADFGVE-YAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVV--- 233
G E + + ++ E +V + S++ Y G + A R++ +M + +
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 234 -TWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDL-RLGRWIHT 291
T+TT+++G R G R A+ LFN+M +V ++V+ + E GD+ + ++
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 292 YIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKRSN-----ISWTTMICA 346
E+ + + S LIH G EA +VF + N I +T ++
Sbjct: 568 MTEKGIVPDTYSY-----RPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHG 621
Query: 347 FAKQGYANEALAIFELMQSLGAN 369
F ++G EAL++ + M G +
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVD 644
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 138/329 (41%), Gaps = 23/329 (6%)
Query: 56 QIVIHGFSQKSYILAKLLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSE 111
++V G Y L++ + G + +A E+ N P+V + ++ G+
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 112 SPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKT 171
K++ L+++M P++ T++ LLSG R+GL+R+ ++ + PN
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 172 NLINLYGMAGADFGVEYAQRVFDEMGERNIV----CWNSMLAVYMRCGNVEGARRIFDKM 227
+I Y G + A EM E+ IV + ++ G A+ D +
Sbjct: 547 VMIEGYCEEG---DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 228 ----MERNVVTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQVSLVAALSACAELGDL 283
E N + +T ++ G+ R GK +AL + +M + VDLD V + + D
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 284 RLGRWIHTYIEEKLSGKSQSLLISLNNALIHMYASCGVIEEAYEVFRWMPKR----SNIS 339
+L + + ++ + S +I + G +EA+ ++ M + ++
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTS----MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 340 WTTMICAFAKQGYANEALAIFELMQSLGA 368
+T +I K G+ NEA + MQ + +
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 86/195 (44%), Gaps = 7/195 (3%)
Query: 95 PSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSGCARSGLLREGEQV 154
P ++ MI +++ +++ +++ M PN +TY+ +++G ++G + E E +
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 155 HGRVLVNGYYPNVFMKTNLINLYGMAGADF--GVEYAQRVFDEMGERNIVCWNSMLAVYM 212
++ PN +++ D VE + + N +N ++ +
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL-LANTATYNMLIRGFC 798
Query: 213 RCGNVEGARRIFDKMMERNV----VTWTTMIAGYARNGKCRQALILFNKMRRAHVDLDQV 268
R G +E A + +M+ V +T+TTMI R ++A+ L+N M + D+V
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 269 SLVAALSACAELGDL 283
+ + C G++
Sbjct: 859 AYNTLIHGCCVAGEM 873
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 123/263 (46%), Gaps = 24/263 (9%)
Query: 24 ANTITTSRILQQHLFHLLQSCKTLKYLSQIHTQIVIHGFSQKSYILA--KLLSFYIASGH 81
N T IL + L + ++ K L+ L V+ GF + I+ L+ + S
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLG------VMSGFGCEPDIVTYNTLIQGFCKSNE 256
Query: 82 LLSAHKVFKEVK-----NPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYS 136
L A ++FK+VK +P V + MI G+ ++ R++ L + M P +T++
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN 316
Query: 137 FLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVEYAQRVFDEM 196
L+ G A++G + E++ G+++ G +P+V T+LI+ Y G V R+++EM
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ---VSQGFRLWEEM 373
Query: 197 GER----NIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVT----WTTMIAGYARNGKC 248
R N ++ ++ + AR + ++ ++++ + +I G+ + GK
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 249 RQALILFNKMRRAHVDLDQVSLV 271
+A ++ +M + D+++
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFT 456
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 22/304 (7%)
Query: 82 LLSAHKVFKEVKNPSVTLWNQMIRGHARSESPRKSVILFNQMRAAEAEPNLLTYSFLLSG 141
L H F+ + +N +IRG K++ L M EP+++TY+ L+ G
Sbjct: 193 LFDEHLRFQSCNDTKT--FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG 250
Query: 142 CARSGLLREGEQVHGRVLVNGY-YPNVFMKTNLINLYGMAGADFGVEYAQRVFDEMGERN 200
+S L + ++ V P+V T++I+ Y AG + A + D+M
Sbjct: 251 FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK---MREASSLLDDMLRLG 307
Query: 201 I----VCWNSMLAVYMRCGNVEGARRIFDKMME----RNVVTWTTMIAGYARNGKCRQAL 252
I V +N ++ Y + G + A I KM+ +VVT+T++I GY R G+ Q
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 253 ILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQSLLISLNNAL 312
L+ +M + + + ++A L R + +L+ K + N +
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG----QLASKDIIPQPFMYNPV 423
Query: 313 IHMYASCGVIEEAYEVFRWMPKR----SNISWTTMICAFAKQGYANEALAIFELMQSLGA 368
I + G + EA + M K+ I++T +I +G EA++IF M ++G
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGC 483
Query: 369 NEAK 372
+ K
Sbjct: 484 SPDK 487
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 102/236 (43%), Gaps = 39/236 (16%)
Query: 72 LLSFYIASGHLLSAHKVFKEVKN----PSVTLWNQMIRGHARSESPRKSVILFNQMRAAE 127
L+ Y +G +L+A ++ ++ + P V + +I G+ R + L+ +M A
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 128 AEPNLLTYSFLLSGCARSGLLREGEQVHGRVLVNGYYPNVFMKTNLINLYGMAGADFGVE 187
PN TYS L++ L + ++ G++ P FM +I+ + AG V
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK---VN 434
Query: 188 YAQRVFDEMGERNIVCWNSMLAVYMRCGNVEGARRIFDKMMERNVVTWTTMIAGYARNGK 247
A + +EM ++ +C + + +T+T +I G+ G+
Sbjct: 435 EANVIVEEMEKK-------------KC--------------KPDKITFTILIIGHCMKGR 467
Query: 248 CRQALILFNKMRRAHVDLDQVSLVAALSACAELGDLRLGRWIHTYIEEKLSGKSQS 303
+A+ +F+KM D+++ V++L +C L+ G Y +++ K QS
Sbjct: 468 MFEAVSIFHKMVAIGCSPDKIT-VSSLLSCL----LKAGMAKEAYHLNQIARKGQS 518