Jatropha Genome Database

JcCA0152991.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152991.20 + phase: 2 /partial
         (154 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G25360.1 | Symbols:  | unknown protein | chr5:8799934-8802333...   187   2e-48
AT4G32342.1 | Symbols:  | unknown protein | chr4:15615184-156162...   148   1e-36
AT3G15770.2 | Symbols:  | unknown protein | chr3:5340243-5341216...   137   2e-33
AT3G15770.1 | Symbols:  | unknown protein | chr3:5340243-5341216...   137   2e-33
AT1G15350.1 | Symbols:  | unknown protein | chr1:5278481-5279486...   125   7e-30
AT1G15350.2 | Symbols:  | unknown protein | chr1:5278481-5279486...   125   7e-30
AT1G15350.3 | Symbols:  | unknown protein | chr1:5278481-5279056...   108   1e-24
AT5G03440.2 | Symbols:  | unknown protein | chr5:857179-857898 R...    86   9e-18
AT5G03440.1 | Symbols:  | unknown protein | chr5:857179-857898 R...    86   9e-18
AT3G54880.1 | Symbols:  | unknown protein | chr3:20337078-203377...    84   2e-17

>AT5G25360.1 | Symbols:  | unknown protein | chr5:8799934-8802333
           REVERSE
          Length = 169

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/147 (65%), Positives = 111/147 (75%), Gaps = 4/147 (2%)

Query: 8   KPSTINAVDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSISALNQPF 67
           KP  I AVD+ SKGLRI+    K+ S+ +DFWS+S  +MD S +QSQRS SSIS  N   
Sbjct: 27  KPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSISFTNN-- 84

Query: 68  DPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNKKQVREPTIRWNATYENLLGSN 127
             ++ + STSNP+EFVN+GL LW QTRQQWLAN  S  K +VREPTI WNATYE+LLG N
Sbjct: 85  --TSTSASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKAKVREPTISWNATYESLLGMN 142

Query: 128 KPFPRPIPLAEMVDFLVDVWEQEGLYD 154
           K F RPIPL EMVDFLVDVWEQEGLYD
Sbjct: 143 KRFSRPIPLPEMVDFLVDVWEQEGLYD 169


>AT4G32342.1 | Symbols:  | unknown protein | chr4:15615184-15616200
           REVERSE
          Length = 161

 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 18/158 (11%)

Query: 1   GCFGCCAKPS-TINAVDQSSKGLRIKDERAKQHSIP-DDFWSSSAGDMDYS-GVQSQRSA 57
            CFGCC +    +  VD+ SKGL+I+ +  K+ S   DDFWS+S  DMD++  +QSQ S 
Sbjct: 16  NCFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQSQSS- 74

Query: 58  SSISALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNKKQ--VREPTIR 115
                 N PFDP     STSN +EFVN+GL+LW  TRQQW   +    ++Q  V EP I 
Sbjct: 75  ------NPPFDPQC---STSNSTEFVNHGLILWNHTRQQW---RECLTRQQCLVPEPAIS 122

Query: 116 WNATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLY 153
           WN+TY++LL +NK FP+PIPL EMV FLVDVWE+EGLY
Sbjct: 123 WNSTYDSLLSTNKLFPQPIPLKEMVHFLVDVWEEEGLY 160


>AT3G15770.2 | Symbols:  | unknown protein | chr3:5340243-5341216
           FORWARD
          Length = 161

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 100/160 (62%), Gaps = 11/160 (6%)

Query: 2   CFGCCAKPSTINAVD---QSSKGLRIKDE----RAKQHSIPDDFWSSSAGDMDYSGVQSQ 54
           C  C  K     +VD     +K + ++++    R       +DFW+++  DM+ +   + 
Sbjct: 4   CLACFDKSKAKTSVDVPLNGTKDVLVEEDWSELRKPSVVASEDFWTNTTLDMESN---AH 60

Query: 55  RSASSISALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNKKQV-REPT 113
            S SSIS  N   D      S++ P+EFVN+GL+LW QTRQQW+ +KRS ++K V REP 
Sbjct: 61  GSVSSISTTNLTIDSQGCGSSSNEPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVGREPI 120

Query: 114 IRWNATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLY 153
           +  N TYE+LLGSNK FPRPIPL EMV FLV+VWE+EGLY
Sbjct: 121 LNENVTYESLLGSNKRFPRPIPLDEMVQFLVEVWEEEGLY 160


>AT3G15770.1 | Symbols:  | unknown protein | chr3:5340243-5341216
           FORWARD
          Length = 162

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 100/160 (62%), Gaps = 11/160 (6%)

Query: 2   CFGCCAKPSTINAVD---QSSKGLRIKDE----RAKQHSIPDDFWSSSAGDMDYSGVQSQ 54
           C  C  K     +VD     +K + ++++    R       +DFW+++  DM+ +   + 
Sbjct: 5   CLACFDKSKAKTSVDVPLNGTKDVLVEEDWSELRKPSVVASEDFWTNTTLDMESN---AH 61

Query: 55  RSASSISALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNKKQV-REPT 113
            S SSIS  N   D      S++ P+EFVN+GL+LW QTRQQW+ +KRS ++K V REP 
Sbjct: 62  GSVSSISTTNLTIDSQGCGSSSNEPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVGREPI 121

Query: 114 IRWNATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLY 153
           +  N TYE+LLGSNK FPRPIPL EMV FLV+VWE+EGLY
Sbjct: 122 LNENVTYESLLGSNKRFPRPIPLDEMVQFLVEVWEEEGLY 161


>AT1G15350.1 | Symbols:  | unknown protein | chr1:5278481-5279486
           REVERSE
          Length = 154

 Score =  125 bits (315), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 97/157 (61%), Gaps = 8/157 (5%)

Query: 1   GCFGCCAKPSTINAVDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSI 60
           GC GC  +  +  A  +      I     K+ S+ +DFWS+S  DMD     SQ    S+
Sbjct: 3   GCVGCYREHRSTAASLKDPPSNSIA-RPCKKPSVSEDFWSTSTVDMDNITFPSQ---GSL 58

Query: 61  SALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNK--KQVREPTIRWN- 117
           S+ NQ FD  + A +++ P E+VN GLLLW QTR++W+  K  PN      +   + WN 
Sbjct: 59  SSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVG-KDKPNNPVDHNQGAKLNWNT 117

Query: 118 ATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLYD 154
           ATY++LLGSNK FP+PIPL EMVDFLVD+WEQEGLYD
Sbjct: 118 ATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154


>AT1G15350.2 | Symbols:  | unknown protein | chr1:5278481-5279486
           REVERSE
          Length = 154

 Score =  125 bits (315), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 97/157 (61%), Gaps = 8/157 (5%)

Query: 1   GCFGCCAKPSTINAVDQSSKGLRIKDERAKQHSIPDDFWSSSAGDMDYSGVQSQRSASSI 60
           GC GC  +  +  A  +      I     K+ S+ +DFWS+S  DMD     SQ    S+
Sbjct: 3   GCVGCYREHRSTAASLKDPPSNSIA-RPCKKPSVSEDFWSTSTVDMDNITFPSQ---GSL 58

Query: 61  SALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNK--KQVREPTIRWN- 117
           S+ NQ FD  + A +++ P E+VN GLLLW QTR++W+  K  PN      +   + WN 
Sbjct: 59  SSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVG-KDKPNNPVDHNQGAKLNWNT 117

Query: 118 ATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLYD 154
           ATY++LLGSNK FP+PIPL EMVDFLVD+WEQEGLYD
Sbjct: 118 ATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154


>AT1G15350.3 | Symbols:  | unknown protein | chr1:5278481-5279056
           REVERSE
          Length = 108

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 4/102 (3%)

Query: 56  SASSISALNQPFDPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNK--KQVREPT 113
           S  S+S+ NQ FD  + A +++ P E+VN GLLLW QTR++W+  K  PN      +   
Sbjct: 8   SQGSLSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVG-KDKPNNPVDHNQGAK 66

Query: 114 IRWN-ATYENLLGSNKPFPRPIPLAEMVDFLVDVWEQEGLYD 154
           + WN ATY++LLGSNK FP+PIPL EMVDFLVD+WEQEGLYD
Sbjct: 67  LNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 108


>AT5G03440.2 | Symbols:  | unknown protein | chr5:857179-857898
           REVERSE
          Length = 98

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 57/85 (67%)

Query: 70  SANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNKKQVREPTIRWNATYENLLGSNKP 129
           S+N    S+   FVN+  + W++ R++W+ +  +   +   EP I +NATYE+LL SN P
Sbjct: 14  SSNDKEKSSEEIFVNHAEIAWQEMRKKWVGDPSNRTSEMPDEPVIGFNATYEDLLTSNTP 73

Query: 130 FPRPIPLAEMVDFLVDVWEQEGLYD 154
           F +PIPLAEMVDFL D+W  +GL++
Sbjct: 74  FNKPIPLAEMVDFLFDIWHGDGLFE 98


>AT5G03440.1 | Symbols:  | unknown protein | chr5:857179-857898
           REVERSE
          Length = 98

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 57/85 (67%)

Query: 70  SANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNKKQVREPTIRWNATYENLLGSNKP 129
           S+N    S+   FVN+  + W++ R++W+ +  +   +   EP I +NATYE+LL SN P
Sbjct: 14  SSNDKEKSSEEIFVNHAEIAWQEMRKKWVGDPSNRTSEMPDEPVIGFNATYEDLLTSNTP 73

Query: 130 FPRPIPLAEMVDFLVDVWEQEGLYD 154
           F +PIPLAEMVDFL D+W  +GL++
Sbjct: 74  FNKPIPLAEMVDFLFDIWHGDGLFE 98


>AT3G54880.1 | Symbols:  | unknown protein | chr3:20337078-20337786
           REVERSE
          Length = 112

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 56/87 (64%)

Query: 68  DPSANAGSTSNPSEFVNYGLLLWKQTRQQWLANKRSPNKKQVREPTIRWNATYENLLGSN 127
           + S+   ++ N    VN+G  +W++ R++W+ ++    K   ++  I W+ TYE+LL ++
Sbjct: 26  EKSSVKTNSENTLTLVNHGAKMWQENREKWVGDQSRQRKNTAKDQIISWSTTYEDLLSTH 85

Query: 128 KPFPRPIPLAEMVDFLVDVWEQEGLYD 154
           +PF   IPL EMVDFLVD+W  EGLYD
Sbjct: 86  EPFSESIPLPEMVDFLVDIWYDEGLYD 112