Jatropha Genome Database

JcCA0152731.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152731.20 + phase: 0 
         (205 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46580.1 | Symbols:  | pyridoxine 5'-phosphate oxidase-relate...   284   3e-77

>AT2G46580.1 | Symbols:  | pyridoxine 5'-phosphate oxidase-related |
           chr2:19129409-19130513 REVERSE
          Length = 198

 Score =  284 bits (727), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 128/200 (64%), Positives = 162/200 (81%), Gaps = 2/200 (1%)

Query: 6   MGTVSATTPWKQLLIRALESNSHLKHSSFFQLATVGSDGRPSNRTVVFRGFEENSDKIQI 65
           MGT  A  PWKQLL  A+E+NSHL HSS+ QLAT+G +GRPSNRTVVFRGFEENSD+IQI
Sbjct: 1   MGTHVA--PWKQLLFGAIEANSHLSHSSYVQLATIGLNGRPSNRTVVFRGFEENSDRIQI 58

Query: 66  NTDTRTRKVEELKQCPFAEICWYFTDSWEQFRINGRVDVIDGSNLDSVKLQLREKSWYDS 125
           NTD R+RK+EELK CPF+E+CWYF+D+WEQFRINGR++VID SN D  KLQ REK+W+ +
Sbjct: 59  NTDLRSRKIEELKHCPFSEMCWYFSDTWEQFRINGRIEVIDASNPDQTKLQQREKAWFAN 118

Query: 126 SIKSRMQYLGPNPGLPCLNERPSNEFFLDPSSGPVAPFCLLIVDPEQVDYLNLKSNQRIM 185
           S++SR+ Y+ P PG PC +E+ S +  LDPSSGPV  +CLL+++PE+VDYLNLK+NQR+ 
Sbjct: 119 SLRSRLIYVCPTPGSPCNSEQSSQQVKLDPSSGPVPEYCLLLLEPEKVDYLNLKTNQRLF 178

Query: 186 FTFTQNANGENCWNSVRINP 205
           F+      GE CW S ++NP
Sbjct: 179 FSSMATGTGEKCWTSEKVNP 198