Jatropha Genome Database

JcCA0152721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152721.10 + phase: 0 /partial
         (296 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02470.4 | Symbols:  | SAMDC (S-ADENOSYLMETHIONINE DECARBOXYL...   442   e-124
AT3G02470.3 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE DECAR...   442   e-124
AT3G02470.1 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE DECAR...   442   e-124
AT5G15950.2 | Symbols:  | adenosylmethionine decarboxylase famil...   439   e-123
AT5G15950.1 | Symbols:  | adenosylmethionine decarboxylase famil...   439   e-123
AT3G25570.1 | Symbols:  | adenosylmethionine decarboxylase famil...   409   e-114
AT5G18930.1 | Symbols: BUD2, SAMDC4 | BUD2 (BUSHY AND DWARF 2); ...   247   7e-66

>AT3G02470.4 | Symbols:  | SAMDC (S-ADENOSYLMETHIONINE
           DECARBOXYLASE); adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD
          Length = 366

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/294 (72%), Positives = 250/294 (85%), Gaps = 3/294 (1%)

Query: 1   MALPTSAIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSN 60
           MAL  SAIGFEGYEKRLEV+F EP  F D  G+GLR+L+K+Q+DEIL PA CTIV SLSN
Sbjct: 1   MAL--SAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSN 58

Query: 61  DHVDSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIF 120
           D +DSYVLSESS F+YPYKVIIKTCGTTKLLLSIP +LKLAG LSL+V SV+Y+RGSF+ 
Sbjct: 59  DQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLC 118

Query: 121 PGAQSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASL-DTGRHSSSV 179
           PG Q FPHRSFSEEV+VLDGHF +LGL SVAY+MG+ D+T+KWHVY+AS  D+   +++V
Sbjct: 119 PGGQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSSNCNNNV 178

Query: 180 QTLEMCMTGLDRDRASVFYKTPASSAAGMTEESGIRKILPQSEICDFDFEPCGYSMNSIE 239
            TLEMCMTGLDR++A+VFYK  A     MT+ SGIRKILP+SEICDF+FEPCGYSMNSIE
Sbjct: 179 YTLEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIE 238

Query: 240 GGAISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEFSIALHS 293
           G AISTIHVTPEDGFSYASFEAVGY+   + L+ L+ RVL+CFEP +FS+A+HS
Sbjct: 239 GDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHS 292


>AT3G02470.3 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE
           DECARBOXYLASE); adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD
          Length = 366

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/294 (72%), Positives = 250/294 (85%), Gaps = 3/294 (1%)

Query: 1   MALPTSAIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSN 60
           MAL  SAIGFEGYEKRLEV+F EP  F D  G+GLR+L+K+Q+DEIL PA CTIV SLSN
Sbjct: 1   MAL--SAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSN 58

Query: 61  DHVDSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIF 120
           D +DSYVLSESS F+YPYKVIIKTCGTTKLLLSIP +LKLAG LSL+V SV+Y+RGSF+ 
Sbjct: 59  DQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLC 118

Query: 121 PGAQSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASL-DTGRHSSSV 179
           PG Q FPHRSFSEEV+VLDGHF +LGL SVAY+MG+ D+T+KWHVY+AS  D+   +++V
Sbjct: 119 PGGQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSSNCNNNV 178

Query: 180 QTLEMCMTGLDRDRASVFYKTPASSAAGMTEESGIRKILPQSEICDFDFEPCGYSMNSIE 239
            TLEMCMTGLDR++A+VFYK  A     MT+ SGIRKILP+SEICDF+FEPCGYSMNSIE
Sbjct: 179 YTLEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIE 238

Query: 240 GGAISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEFSIALHS 293
           G AISTIHVTPEDGFSYASFEAVGY+   + L+ L+ RVL+CFEP +FS+A+HS
Sbjct: 239 GDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHS 292


>AT3G02470.1 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE
           DECARBOXYLASE); adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD
          Length = 366

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/294 (72%), Positives = 250/294 (85%), Gaps = 3/294 (1%)

Query: 1   MALPTSAIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSN 60
           MAL  SAIGFEGYEKRLEV+F EP  F D  G+GLR+L+K+Q+DEIL PA CTIV SLSN
Sbjct: 1   MAL--SAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSN 58

Query: 61  DHVDSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIF 120
           D +DSYVLSESS F+YPYKVIIKTCGTTKLLLSIP +LKLAG LSL+V SV+Y+RGSF+ 
Sbjct: 59  DQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLC 118

Query: 121 PGAQSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASL-DTGRHSSSV 179
           PG Q FPHRSFSEEV+VLDGHF +LGL SVAY+MG+ D+T+KWHVY+AS  D+   +++V
Sbjct: 119 PGGQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSSNCNNNV 178

Query: 180 QTLEMCMTGLDRDRASVFYKTPASSAAGMTEESGIRKILPQSEICDFDFEPCGYSMNSIE 239
            TLEMCMTGLDR++A+VFYK  A     MT+ SGIRKILP+SEICDF+FEPCGYSMNSIE
Sbjct: 179 YTLEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIE 238

Query: 240 GGAISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEFSIALHS 293
           G AISTIHVTPEDGFSYASFEAVGY+   + L+ L+ RVL+CFEP +FS+A+HS
Sbjct: 239 GDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHS 292


>AT5G15950.2 | Symbols:  | adenosylmethionine decarboxylase family
           protein | chr5:5206706-5207794 FORWARD
          Length = 362

 Score =  439 bits (1129), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/291 (72%), Positives = 249/291 (85%)

Query: 3   LPTSAIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSNDH 62
           +  SAIGFEGYEKRLEV+F EPG F D  G GLR+L+K+QIDEIL+PAECTIV SLSND 
Sbjct: 1   MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQ 60

Query: 63  VDSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIFPG 122
           +DSYVLSESSLFI+PYK++IKTCGTTKLLLSI  +L+LAG LSL V +VRY+RGSF+ PG
Sbjct: 61  LDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPG 120

Query: 123 AQSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASLDTGRHSSSVQTL 182
            Q FPHR+FSEEV+VLDGHF KLGL SVAY+MG+ D+T+KWHVYSAS     + ++V TL
Sbjct: 121 GQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDDETKKWHVYSASSANSNNKNNVYTL 180

Query: 183 EMCMTGLDRDRASVFYKTPASSAAGMTEESGIRKILPQSEICDFDFEPCGYSMNSIEGGA 242
           EMCMTGLD+D+ASVFYK  +SSA  MT+ SGIRKILPQS+ICDF+FEPCGYSMNSIEG A
Sbjct: 181 EMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEGDA 240

Query: 243 ISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEFSIALHS 293
           ISTIHVTPEDGFSYASFEAVGY+   + L+ L+ +VL CF+P +FS+A+HS
Sbjct: 241 ISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHS 291


>AT5G15950.1 | Symbols:  | adenosylmethionine decarboxylase family
           protein | chr5:5206706-5207794 FORWARD
          Length = 362

 Score =  439 bits (1129), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/291 (72%), Positives = 249/291 (85%)

Query: 3   LPTSAIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSNDH 62
           +  SAIGFEGYEKRLEV+F EPG F D  G GLR+L+K+QIDEIL+PAECTIV SLSND 
Sbjct: 1   MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQ 60

Query: 63  VDSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIFPG 122
           +DSYVLSESSLFI+PYK++IKTCGTTKLLLSI  +L+LAG LSL V +VRY+RGSF+ PG
Sbjct: 61  LDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPG 120

Query: 123 AQSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASLDTGRHSSSVQTL 182
            Q FPHR+FSEEV+VLDGHF KLGL SVAY+MG+ D+T+KWHVYSAS     + ++V TL
Sbjct: 121 GQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDDETKKWHVYSASSANSNNKNNVYTL 180

Query: 183 EMCMTGLDRDRASVFYKTPASSAAGMTEESGIRKILPQSEICDFDFEPCGYSMNSIEGGA 242
           EMCMTGLD+D+ASVFYK  +SSA  MT+ SGIRKILPQS+ICDF+FEPCGYSMNSIEG A
Sbjct: 181 EMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEGDA 240

Query: 243 ISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEFSIALHS 293
           ISTIHVTPEDGFSYASFEAVGY+   + L+ L+ +VL CF+P +FS+A+HS
Sbjct: 241 ISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHS 291


>AT3G25570.1 | Symbols:  | adenosylmethionine decarboxylase family
           protein | chr3:9287413-9288462 REVERSE
          Length = 349

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/296 (68%), Positives = 237/296 (80%), Gaps = 3/296 (1%)

Query: 3   LPTSAIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSNDH 62
           +  SA GFEG+EKRLE+SF E   F DP G  LRSL+K+Q+DEIL PAECTIV SL+N  
Sbjct: 1   MAVSATGFEGFEKRLEISFFETTDFLDPQGKSLRSLTKSQLDEILTPAECTIVSSLTNSF 60

Query: 63  VDSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIFPG 122
           VDSYVLSESSLF+YPYK+IIKTCGTTKLLLSIP IL+LA +L LTV SVRY+RGSFIFPG
Sbjct: 61  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILRLADSLCLTVKSVRYTRGSFIFPG 120

Query: 123 AQSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKT-QKWHVYSASL--DTGRHSSSV 179
           AQS+PHRSFSEEVA+LD +FGKL   S A+VMG  D   Q+WHVYSAS   ++      V
Sbjct: 121 AQSYPHRSFSEEVALLDDYFGKLNAGSKAFVMGGSDNNPQRWHVYSASSTEESAVCDKPV 180

Query: 180 QTLEMCMTGLDRDRASVFYKTPASSAAGMTEESGIRKILPQSEICDFDFEPCGYSMNSIE 239
            TLEMCMTGLD  +ASVF+KT + SA+ MT  SGIR ILP SEICDF+FEPCGYSMNSIE
Sbjct: 181 YTLEMCMTGLDNIKASVFFKTNSVSASEMTISSGIRNILPGSEICDFNFEPCGYSMNSIE 240

Query: 240 GGAISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEFSIALHSDF 295
           G A+STIHVTPEDGFSYASFE VGY+L+ +    L++RVL CF P EFS+A+H++ 
Sbjct: 241 GDAVSTIHVTPEDGFSYASFETVGYDLKALNFKELVDRVLVCFGPEEFSVAVHANL 296


>AT5G18930.1 | Symbols: BUD2, SAMDC4 | BUD2 (BUSHY AND DWARF 2);
           adenosylmethionine decarboxylase | chr5:6312172-6313215
           REVERSE
          Length = 347

 Score =  247 bits (630), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 136/292 (46%), Positives = 182/292 (62%), Gaps = 11/292 (3%)

Query: 9   GFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSNDHVDSYVL 68
           GFEG+EKRLE+ F +         MGLR +    +D++L   +CT+V +++N   D+YVL
Sbjct: 5   GFEGFEKRLELRFFDDDKPITKNPMGLRLIDFESLDQVLNEVQCTVVSAVANRSFDAYVL 64

Query: 69  SESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIFPGAQSFPH 128
           SESSLF+YP K+IIKTCGTT+LL SI  ++ LA  L LT+ + RYSRGSFIFP AQ FP+
Sbjct: 65  SESSLFVYPTKIIIKTCGTTQLLKSIRPLIHLARNLGLTLRACRYSRGSFIFPKAQPFPY 124

Query: 129 RSFSEEVAVLDGHFGK-LGLESVAYVMGSPDKTQKWHVYSASLDTGRHSSSVQTLEMCMT 187
            SF +EV V++    K L     + +  S + ++ WHV++AS D       V  +E+CMT
Sbjct: 125 TSFKDEVIVVEESLPKSLCYRKASVMTPSNNPSRAWHVFTASADV-ESDEHVVVVEVCMT 183

Query: 188 GLDRDRASVFYKTPA-----SSAAG--MTEESGIRKILPQSEICDFDFEPCGYSMNSIEG 240
            LDR  A  F+K        S +AG  MT  SGI  I   + ICDF F+PCGYSMN ++G
Sbjct: 184 ELDRVNARSFFKRKGDEKNNSDSAGKEMTRLSGIDNINANAYICDFAFDPCGYSMNGVDG 243

Query: 241 GAISTIHVTPEDGFSYASFEA--VGYNLEQVKLTLLLERVLACFEPAEFSIA 290
              STIHVTPEDGFSYASFE     Y+     ++ +L R +  F P++ SIA
Sbjct: 244 DRYSTIHVTPEDGFSYASFECGLSLYDNGHEDISEVLSRAIDVFRPSDVSIA 295