Jatropha Genome Database
- JcCA0152621.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0152621.10 - phase: 0 /partial
(158 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE REGUL... 176 6e-45
AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS PSEUDO-R... 163 4e-41
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 136 7e-33
AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-R... 135 9e-33
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB E... 90 4e-19
AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULAT... 79 1e-15
AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 77 3e-15
AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 77 4e-15
AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGUL... 77 5e-15
AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE REGUL... 75 1e-14
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 72 1e-13
AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE REGUL... 71 2e-13
AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE REGUL... 69 1e-12
AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3); trans... 69 1e-12
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE ... 69 1e-12
AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11); tr... 69 2e-12
AT1G19050.1 | Symbols: ARR7 | ARR7 (RESPONSE REGULATOR 7); trans... 63 1e-10
AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS RES... 60 5e-10
AT1G74890.1 | Symbols: ARR15 | ARR15 (RESPONSE REGULATOR 15); tr... 60 6e-10
AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6); trans... 60 6e-10
AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONS... 59 1e-09
AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9)... 59 2e-09
AT3G56380.1 | Symbols: ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE... 58 2e-09
AT2G41310.1 | Symbols: ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3... 55 1e-08
AT2G40670.1 | Symbols: ARR16, RR16 | ARR16 (ARABIDOPSIS RESPONSE... 54 4e-08
AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE REGUL... 52 1e-07
AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 49 2e-06
AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 49 2e-06
AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 49 2e-06
AT4G18020.5 | Symbols: | APRR2; transcription factor/ two-compo... 49 2e-06
AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 49 2e-06
AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE REGUL... 48 2e-06
>AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component
response regulator | chr5:638283-641461 REVERSE
Length = 727
Score = 176 bits (445), Expect = 6e-45, Method: Composition-based stats.
Identities = 90/157 (57%), Positives = 102/157 (64%), Gaps = 4/157 (2%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
V NG+QAWK+LEDL NH D+VLTEV+MP +SGIGLLCKI+NHK+ +NIPVIMMSSHD
Sbjct: 104 VVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHD 163
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKCHXXXXXXXXXXXXXXVQTQXXXX 122
SM +VFKCLSKGA+DFLVKPIRKNELK LWQHVWR+C QTQ
Sbjct: 164 SMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTH---QTQKSVK 220
Query: 123 XXXXXXXXXXX-XXXXXXXXXXGLNAKDGSDNGSGTQ 158
GLNA DGS +GSG Q
Sbjct: 221 SKSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQ 257
>AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/
two-component response regulator |
chr5:24198215-24200502 REVERSE
Length = 495
Score = 163 bits (413), Expect = 4e-41, Method: Composition-based stats.
Identities = 87/157 (55%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VTAV + L+AW++LED + DLVLTEV MP SG GLL KIM+HKT KNIPVIMMSSHD
Sbjct: 90 VTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHD 149
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKCHXXXXXXXXXXXXXXVQTQXXXX 122
SM +VFKCLS GA+DFLVKPIRKNELKNLWQHVWR+CH +
Sbjct: 150 SMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPEST 209
Query: 123 XXXXXXXXXXXXXXXXXXXXXGLNAKD-GSDNGSGTQ 158
GL+ +D GSDNGSGTQ
Sbjct: 210 QGSENDASISDEHRNESGSSGGLSNQDGGSDNGSGTQ 246
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19232874-19234901 FORWARD
Length = 468
Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 78/96 (81%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
V AV +GL AW++L++ +++ DL+LTE+ +P +SG LL +M H+ CKNIPVIMMSS D
Sbjct: 63 VVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQD 122
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
S+ +V KC+ +GA D+L+KP+RKNELKNLWQHVWR+
Sbjct: 123 SIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
>AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator | chr5:8356204-8358873
REVERSE
Length = 667
Score = 135 bits (341), Expect = 9e-33, Method: Composition-based stats.
Identities = 58/96 (60%), Positives = 75/96 (78%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
V AV +GL+AW++L+ DL+LTEV +P +SG LL IM H CKNIPVIMMS+ D
Sbjct: 185 VAAVPDGLKAWEMLKGKPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQD 244
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
S+N V+KC+ KGA D+LVKP+R+NEL+NLWQHVWR+
Sbjct: 245 SVNTVYKCMLKGAADYLVKPLRRNELRNLWQHVWRR 280
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component
response regulator | chr5:24675540-24678176 FORWARD
Length = 618
Score = 90.1 bits (222), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/96 (44%), Positives = 58/96 (60%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VTAV++ Q L D++L E+ +P G+ +L I K + IPVIMMS D
Sbjct: 45 VTAVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQD 104
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
+ +V KCL GA D+LVKP+R NEL NLW H+WR+
Sbjct: 105 EVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRR 140
>AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULATOR
2); transcription factor/ two-component response
regulator | chr4:9112979-9115785 FORWARD
Length = 664
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK-NIPVIMMSSH 61
VT A LL N FD+V+++V MP + G K++ H + ++PVIMMS+
Sbjct: 54 VTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGF----KLLEHVGLEMDLPVIMMSAD 109
Query: 62 DSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
DS ++V K ++ GA+D+L+KP+R LKN+WQHV RK
Sbjct: 110 DSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRK 146
>AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5759139 FORWARD
Length = 690
Score = 77.4 bits (189), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK-NIPVIMMSSH 61
VT A LL + FD+V+++V MP + G K++ H + ++PVIMMS+
Sbjct: 63 VTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGF----KLLEHVGLEMDLPVIMMSAD 118
Query: 62 DSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
DS ++V K ++ GA+D+L+KP+R LKN+WQHV RK
Sbjct: 119 DSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRK 155
>AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5758853 FORWARD
Length = 669
Score = 77.0 bits (188), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK-NIPVIMMSSH 61
VT A LL + FD+V+++V MP + G K++ H + ++PVIMMS+
Sbjct: 63 VTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGF----KLLEHVGLEMDLPVIMMSAD 118
Query: 62 DSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
DS ++V K ++ GA+D+L+KP+R LKN+WQHV RK
Sbjct: 119 DSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRK 155
>AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE
REGULATOR 12); transcription factor/ two-component
response regulator | chr2:10724490-10726961 REVERSE
Length = 596
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT +A +LL + N FDLV+++V MP + G LL + ++PVIM+S+H
Sbjct: 43 VTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHS 99
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
V K ++ GA D+L+KP+R ELKN+WQHV R
Sbjct: 100 DPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVR 134
>AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE
REGULATOR 10); transcription factor/ two-component
response regulator | chr4:15444290-15446766 REVERSE
Length = 552
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT A +LL + N FDLV+++V MP + G LL + ++PVIM+S+H
Sbjct: 43 VTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHS 99
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
V K + GA D+L+KP+R ELKN+WQHV R
Sbjct: 100 DPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVR 134
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19233422-19234901 FORWARD
Length = 351
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 36/41 (87%)
Query: 58 MSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
MSS DS+ +V KC+ +GA D+L+KP+RKNELKNLWQHVWR+
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 41
>AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE
REGULATOR 14); transcription factor/ two-component
response regulator | chr2:333041-334514 FORWARD
Length = 382
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 12 AWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHDSMNIVFKCL 71
A +L + + FDLVL++V MP ++G LL ++ + ++PVIMMS V +
Sbjct: 46 ALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEM--DLPVIMMSVDGRTTTVMTGI 103
Query: 72 SKGALDFLVKPIRKNELKNLWQHVWRK 98
+ GA D+L+KPIR ELKN+WQHV R+
Sbjct: 104 NHGACDYLIKPIRPEELKNIWQHVVRR 130
>AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE
REGULATOR 18); transcription factor/ two-component
response regulator | chr5:23501785-23504099 REVERSE
Length = 618
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT +A ++L + +N FDLV+++V MP G K++ ++PVIM+S+H
Sbjct: 27 VTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGF----KLLEIGLEMDLPVIMLSAHS 82
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
+ V K + GA D+LVKP+ EL+N+W HV +K
Sbjct: 83 DYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKK 118
>AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response
regulator | chr1:22065894-22066895 REVERSE
Length = 231
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 9/104 (8%)
Query: 3 VTAVENGLQAWKLL----EDLTNHFD-----LVLTEVVMPCVSGIGLLCKIMNHKTCKNI 53
VTAV++G +A + L + FD L++T+ MP ++G LL KI + K +
Sbjct: 59 VTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEV 118
Query: 54 PVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
PV++MSS + M + +CL +GA DFL+KP++ ++K L ++ R
Sbjct: 119 PVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLADVKRLRSYLTR 162
>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE
REGULATOR 4); protein binding / transcription regulator/
two-component response regulator | chr1:3442624-3443759
REVERSE
Length = 259
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 62/104 (59%), Gaps = 9/104 (8%)
Query: 3 VTAVENGLQAWKLL----EDLTNHFD-----LVLTEVVMPCVSGIGLLCKIMNHKTCKNI 53
VTAV++G +A + L E + FD L++T+ MP ++G LL KI + +
Sbjct: 60 VTAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREV 119
Query: 54 PVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
PV++MSS + + + +CL +GA DFL+KP++ ++K L H+ +
Sbjct: 120 PVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVKRLRSHLTK 163
>AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11);
transcription factor/ two-component response regulator |
chr1:25376994-25378905 REVERSE
Length = 521
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 11 QAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK-NIPVIMMSSHDSMNIVFK 69
+A +LL + + +D+V+++V MP + G K++ H + ++PVIMMS + V K
Sbjct: 45 EALRLLRERKDGYDIVISDVNMPDMDGF----KLLEHVGLELDLPVIMMSVDGETSRVMK 100
Query: 70 CLSKGALDFLVKPIRKNELKNLWQHVWRK 98
+ GA D+L+KPIR ELK +WQHV RK
Sbjct: 101 GVQHGACDYLLKPIRMKELKIIWQHVLRK 129
>AT1G19050.1 | Symbols: ARR7 | ARR7 (RESPONSE REGULATOR 7);
transcription regulator/ two-component response
regulator | chr1:6577919-6579078 REVERSE
Length = 206
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 13/106 (12%)
Query: 3 VTAVENGLQAWKLL-----------EDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK 51
VT VE+G +A + L +DL +L++T+ MP +SG LL KI +
Sbjct: 50 VTTVESGTRALQYLGLDGGKGASNLKDL--KVNLIVTDYSMPGLSGYDLLKKIKESSAFR 107
Query: 52 NIPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
+PV++MSS + + + +CL +GA +FL+KP++ ++K + Q + R
Sbjct: 108 EVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLADVKRIKQLIMR 153
>AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS
RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator |
chr3:17759112-17760740 REVERSE
Length = 184
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 3 VTAVENGLQAWKLL------------EDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTC 50
VT V++ +A + L EDL +L++T+ MP ++G LL KI
Sbjct: 51 VTVVDSATRALQYLGLDGENNSSVGFEDL--KINLIMTDYSMPGMTGYELLKKIKESSAF 108
Query: 51 KNIPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
+ IPV++MSS + + + +CL +GA DFL+KP++ ++K L + +
Sbjct: 109 REIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADVKRLRDSLMK 155
>AT1G74890.1 | Symbols: ARR15 | ARR15 (RESPONSE REGULATOR 15);
transcription regulator/ two-component response
regulator | chr1:28131590-28132710 REVERSE
Length = 206
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 3 VTAVENGLQAWKLL-----------EDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK 51
VT VE+G +A + L +DL +L++T+ MP ++G LL KI +
Sbjct: 44 VTTVESGTRALQYLGLDGDNGSSGLKDL--KVNLIVTDYSMPGLTGYELLKKIKESSALR 101
Query: 52 NIPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
IPV++MSS + + +C+ +GA +FL+KP++ ++K L + + R
Sbjct: 102 EIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLADVKRLKELIMR 147
>AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6);
transcription regulator/ two-component response
regulator | chr5:25252745-25254158 REVERSE
Length = 186
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 3 VTAVENGLQAWKLL-----------EDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCK 51
VT V++ +A + L EDL +L++T+ MP ++G LL KI +
Sbjct: 51 VTVVDSATRALQYLGLDVEEKSVGFEDL--KVNLIMTDYSMPGMTGYELLKKIKESSAFR 108
Query: 52 NIPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWR 97
+PV++MSS + + + +CL +GA DFL+KP++ +++K L + +
Sbjct: 109 EVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDVKRLRDSLMK 154
>AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONSE
REGULATOR 20); transcription factor/ two-component
response regulator | chr3:23176556-23178294 REVERSE
Length = 426
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 3 VTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHD 62
VT E+G +A L + DLV+ + MP ++G+ L I ++PV++MS
Sbjct: 65 VTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQM---DLPVVIMSHEY 121
Query: 63 SMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
V + + GA DFLVKP+ K + LW+HV+RK
Sbjct: 122 KKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRK 157
>AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9);
transcription regulator/ two-component response
regulator | chr3:21110059-21111228 FORWARD
Length = 234
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 22 HFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHDSMNIVFKCLSKGALDFLVK 81
+L++T+ MP ++G LL K+ ++IPV++MSS + + +CL +GA +F +K
Sbjct: 73 EVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLK 132
Query: 82 PIRKNELKNLWQHVWR 97
P+R +L L H+ +
Sbjct: 133 PVRLADLNKLKPHMMK 148
>AT3G56380.1 | Symbols: ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE
REGULATOR 17); transcription regulator/ two-component
response regulator | chr3:20905480-20906368 FORWARD
Length = 153
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Query: 3 VTAVENGLQAWKLL--------EDLTN--HFDLVLTEVVMPCVSGIGLLCKIMNHKTCKN 52
VT ENGL+A + L + LTN +L++T+ MP ++G LL K+ K
Sbjct: 46 VTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKE 105
Query: 53 IPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVW 96
+PV+++SS + + KCL+ GA F+ KP++ ++++ L H+
Sbjct: 106 VPVVILSSENIPTRINKCLASGAQMFMQKPLKLSDVEKLKCHLL 149
>AT2G41310.1 | Symbols: ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response
regulator | chr2:17222280-17223536 FORWARD
Length = 225
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 22 HFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHDSMNIVFKCLSKGALDFLVK 81
+L++T+ MP ++G LL K+ ++IPV++MSS + + +CL +GA +F +K
Sbjct: 71 EINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLK 130
Query: 82 PIRKNELKNLWQHVWR 97
P++ +L L H+ +
Sbjct: 131 PVKLADLTKLKPHMMK 146
>AT2G40670.1 | Symbols: ARR16, RR16 | ARR16 (ARABIDOPSIS RESPONSE
REGULATOR 16); transcription regulator/ two-component
response regulator | chr2:16970258-16971120 FORWARD
Length = 164
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 3 VTAVENGLQAWKLLE--DLTNHFD----------LVLTEVVMPCVSGIGLLCKIMNHKTC 50
VT EN L+A + L D H D L++T+ MP ++G LL K+
Sbjct: 55 VTTAENALRALEYLGLGDQNQHIDALTCNVMKVSLIITDYCMPGMTGFELLKKVKESSNL 114
Query: 51 KNIPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVW 96
+ +PV++MSS + + KCL+ GA F+ KP++ +++ L H+
Sbjct: 115 REVPVVIMSSENIPTRINKCLASGAQMFMQKPLKLADVEKLKCHLM 160
>AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE
REGULATOR 19); transcription factor/ two-component
response regulator | chr1:18191342-18193598 FORWARD
Length = 608
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 11 QAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSSHDSMNIVFKC 70
+A L + ++V+ + MP + G+ L I + ++PV++MS + V K
Sbjct: 68 KALAFLTSCKHEINIVIWDFHMPGIDGLQALKSITSKL---DLPVVIMSDDNQTESVMKA 124
Query: 71 LSKGALDFLVKPIRKNELKNLWQHVWRK 98
GA D++VKP+++ + N+WQH+ RK
Sbjct: 125 TFYGACDYVVKPVKEEVMANIWQHIVRK 152
>AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 53 IPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKC 99
+P IM+S+ + KC++ GA++FL KP+ +LKN+WQHV K
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKA 142
>AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 53 IPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKC 99
+P IM+S+ + KC++ GA++FL KP+ +LKN+WQHV K
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKA 142
>AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 53 IPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKC 99
+P IM+S+ + KC++ GA++FL KP+ +LKN+WQHV K
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKA 142
>AT4G18020.5 | Symbols: | APRR2; transcription factor/
two-component response regulator |
chr4:10003991-10006682 REVERSE
Length = 487
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 53 IPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKC 99
+P IM+S+ + KC++ GA++FL KP+ +LKN+WQHV K
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKA 142
>AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003991-10006682 REVERSE
Length = 487
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 53 IPVIMMSSHDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKC 99
+P IM+S+ + KC++ GA++FL KP+ +LKN+WQHV K
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKA 142
>AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE
REGULATOR 21); transcription factor/ two-component
response regulator | chr5:2252237-2256018 FORWARD
Length = 621
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 1 MAVTAVENGLQAWKLLEDLTNHFDLVLTEVVMPCVSGIGLLCKIMNHKTCKNIPVIMMSS 60
+AV AV++ +A L+ ++ DL++T+ MP ++G+ L +I + N+PV++MSS
Sbjct: 48 IAVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMNGLQLKKQIT--QEFGNLPVLVMSS 105
Query: 61 HDSMNIVFKCLSKGALDFLVKPIRKNELKNLWQ 93
N + LS GA+ F+ KPI +L ++Q
Sbjct: 106 --DTNKEEESLSCGAMGFIPKPIHPTDLTKIYQ 136