Jatropha Genome Database

JcCA0152521.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152521.10 - phase: 0 
         (212 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G44520.1 | Symbols:  | ribose 5-phosphate isomerase-related |...   268   2e-72
AT1G71100.1 | Symbols: RSW10 | RSW10 (RADIAL SWELLING 10); ribos...    74   6e-14
AT3G04790.1 | Symbols:  | ribose 5-phosphate isomerase-related |...    74   6e-14
AT2G01290.1 | Symbols:  | ribose-5-phosphate isomerase | chr2:14...    73   1e-13

>AT5G44520.1 | Symbols:  | ribose 5-phosphate isomerase-related |
           chr5:17934610-17936441 REVERSE
          Length = 296

 Score =  268 bits (685), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 129/205 (62%), Positives = 166/205 (80%), Gaps = 1/205 (0%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           M+IGLGSG AS  AI+YLG+QL +G+L ++VG+PMS           IPL+ Y+DG QID
Sbjct: 56  MIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKYGIPLEYYRDGVQID 115

Query: 61  FAFDDADLIEEETLIAVIGRRKS-QVEESIIQEKSILNAANKHVFIIPEKQYKGVIDGSI 119
           FAF DAD +EE TLIAVIGRR+S Q ++ I+++KSI+  A++ VF+I E+QYK  ++GSI
Sbjct: 116 FAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFMIKEEQYKAGLEGSI 175

Query: 120 PVLVQSLNWMEAAEEIDDLFLGDAEVWRRPSIGDAGPLGGDFPLVTREGHNVLDVIFTSP 179
           PVLVQSLNW+  AEEIDDL+LGDAEVWRR S+ + GPLGGDFP+VT +GHN+LDVIFT+P
Sbjct: 176 PVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGDFPIVTSDGHNILDVIFTTP 235

Query: 180 IQSLAEVAKSLDKVAGVVDHGIISK 204
           I+SLA++A SLDK+ GVVDHG+I K
Sbjct: 236 IRSLADLATSLDKIDGVVDHGLIIK 260


>AT1G71100.1 | Symbols: RSW10 | RSW10 (RADIAL SWELLING 10);
           ribose-5-phosphate isomerase | chr1:26814726-26815529
           FORWARD
          Length = 267

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 12/205 (5%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           MVIGLG+G+ +  A+  +   LR G LKDI+GIP S           IPL        +D
Sbjct: 48  MVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTSTTTHEQAVSLGIPLSDLDSHPVVD 107

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSILNAANKHVFIIPEKQYKGVIDGS-- 118
            + D AD + +  L  V GR       S+++EK I  A+ K V I+ E +    I GS  
Sbjct: 108 LSIDGADEV-DPALNLVKGRGG-----SLLREKMIEGASKKFVVIVDESKLVKYIGGSGL 161

Query: 119 -IPVLVQSLNWMEAAEEIDDLFLGDAEVWR-RPSIGDAGPLGGDFPLVTREGHNVLDVIF 176
            +PV V          ++++LF     V + R  IG  G      P VT   + V+D+  
Sbjct: 162 AVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNGEEAA--PAVTDNRNYVVDLYL 219

Query: 177 TSPIQSLAEVAKSLDKVAGVVDHGI 201
              I  L   ++++ +  GVV+HG+
Sbjct: 220 ERDIGDLEVASEAILRFPGVVEHGM 244


>AT3G04790.1 | Symbols:  | ribose 5-phosphate isomerase-related |
           chr3:1313365-1314195 FORWARD
          Length = 276

 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 19/207 (9%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           MV+GLG+G+ +  A+  +G+ L +G L DIVGIP S           IPL       +ID
Sbjct: 64  MVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRID 123

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSILNAANKHVFIIPEKQYKGVIDGS-- 118
            A D AD ++   L  V GR       ++++EK +   A+K + +  + +    + GS  
Sbjct: 124 LAIDGADEVDPN-LDLVKGRGG-----ALLREKMVEAVADKFIVVADDTKLVTGLGGSGL 177

Query: 119 -IPVLVQSLNWMEAAEEIDDLF--LGDAEVWRRPSIGDAGPLGGDFPLVTREGHNVLDVI 175
            +PV V    W      + DLF   G     R    G         P VT   + ++D+ 
Sbjct: 178 AMPVEVVQFCWNFNLIRLQDLFKEFGCESKLRVDGDGK--------PYVTDNSNYIIDLY 229

Query: 176 FTSPIQSLAEVAKSLDKVAGVVDHGII 202
           F +P++     AK + K  GVV+HG+ 
Sbjct: 230 FKTPLKDGFAAAKEIGKFQGVVEHGLF 256


>AT2G01290.1 | Symbols:  | ribose-5-phosphate isomerase |
           chr2:149192-149989 REVERSE
          Length = 265

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 17/205 (8%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           MV+GLG+G+ +  A+  +G  LR G L++IVGIP S           IPL        ID
Sbjct: 52  MVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVID 111

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSILNAANKHVFIIPEKQYKGVIDGS-- 118
            + D AD  E +  + ++  R      S+++EK I  A+ K V I+ + +    I GS  
Sbjct: 112 LSIDGAD--EVDPFLNLVKGRGG----SLLREKMIEGASKKFVVIVDDSKMVKHIGGSKL 165

Query: 119 -IPVLVQSLNWMEAAEEIDDLFLG-DAEVWRRPSIGDAGPLGGDFPLVTREGHNVLDVIF 176
            +PV +    W   AE++  L  G   E   R  +G+ G        VT  G+ ++D+  
Sbjct: 166 ALPVEIVPFCWKFTAEKLRSLLEGYGCEANLR--LGEKGK-----AFVTDNGNYIVDMHV 218

Query: 177 TSPIQSLAEVAKSLDKVAGVVDHGI 201
              +  L  V+ ++ ++ GVV+HG+
Sbjct: 219 EEDMGDLGAVSDAILRLPGVVEHGM 243