Jatropha Genome Database

JcCA0152151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152151.10 + phase: 0 
         (97 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34840.1 | Symbols: ATMTN2, ATMTAN2, MTN2, MTAN2 | ATMTN2; me...   155   5e-39
AT4G38800.1 | Symbols: ATMTN1, ATMTAN1, MTN1, MTAN1 | ATMTN1; ca...   146   3e-36

>AT4G34840.1 | Symbols: ATMTN2, ATMTAN2, MTN2, MTAN2 | ATMTN2;
           methylthioadenosine nucleosidase |
           chr4:16606299-16607748 FORWARD
          Length = 254

 Score =  155 bits (392), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 71/96 (73%), Positives = 87/96 (90%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDMEGAAVAYVADLLKVPTIFVKAVTDVVDGDK 61
           VG+LSTGDS+DMSP DE +ITANDA VKDMEGAAVAYVAD+ KVPTI +K VTD+VDG++
Sbjct: 159 VGRLSTGDSMDMSPHDEESITANDATVKDMEGAAVAYVADIFKVPTILIKGVTDIVDGNR 218

Query: 62  PTAEEFLQNLAAVTAALEQAVTQAIDFIKGKCLSEL 97
           PT+EEFL+NLAAVTA L++++T+ IDFI GKCLS+L
Sbjct: 219 PTSEEFLENLAAVTAKLDESLTKVIDFISGKCLSDL 254


>AT4G38800.1 | Symbols: ATMTN1, ATMTAN1, MTN1, MTAN1 | ATMTN1;
           catalytic/ methylthioadenosine nucleosidase |
           chr4:18113355-18114996 REVERSE
          Length = 267

 Score =  146 bits (368), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/96 (73%), Positives = 82/96 (85%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDMEGAAVAYVADLLKVPTIFVKAVTDVVDGDK 61
           +G+LSTGDSLDMS QDE  I ANDA +KDMEGAAVAYVADLLK+P +F+KAVTD+VDGDK
Sbjct: 172 IGRLSTGDSLDMSTQDETLIIANDATLKDMEGAAVAYVADLLKIPVVFLKAVTDLVDGDK 231

Query: 62  PTAEEFLQNLAAVTAALEQAVTQAIDFIKGKCLSEL 97
           PTAEEFLQNL  VTAALE   T+ I+FI G+ LS+L
Sbjct: 232 PTAEEFLQNLTVVTAALEGTATKVINFINGRNLSDL 267