Jatropha Genome Database

JcCA0152031.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152031.10 + phase: 0 /pseudo/partial
         (314 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G20760.1 | Symbols:  | calcium-binding EF hand family protein...   174   5e-44
AT1G21630.1 | Symbols:  | calcium-binding EF hand family protein...   105   3e-23

>AT1G20760.1 | Symbols:  | calcium-binding EF hand family protein |
           chr1:7209515-7214773 FORWARD
          Length = 1019

 Score =  174 bits (442), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/256 (46%), Positives = 144/256 (56%), Gaps = 26/256 (10%)

Query: 1   MERGGSADGILQVRADRIQSDLDELMKGFKLNVARDMGXRXXXXXXXXXPIGWQPGIQEG 60
           ME+GGSADG+LQVRADRIQSDL+ELMK       +  G           P GWQPGIQEG
Sbjct: 635 MEQGGSADGLLQVRADRIQSDLEELMKAL-TERCKKHGLEVNSKALVDLPAGWQPGIQEG 693

Query: 61  AAVWDEEWDKFEDEGFANDLMLDM---KNVSAPNSKSTIQDGSPTHDSLSNGDDKSGNFS 117
           AA+WDEEWDKFEDEGF N++  D    +N S      T+ DGS   DS ++ +D  G FS
Sbjct: 694 AALWDEEWDKFEDEGFGNEITFDKSKEQNSSGEKENGTVDDGSGPPDSPTHVEDNYGPFS 753

Query: 118 RVDGHGIEGESVYSHSEDELARSPQSSLAGRNALGSPSKAFSDVFAKSTDADAETHRSFD 177
                  E E   +HSED   RSP+ S   RNA   PS  +S           +    FD
Sbjct: 754 ETSDRHHESEYGTTHSED---RSPRDSPVSRNATEVPSPDYS---------QGKNSEFFD 801

Query: 178 ESTWG-AFDTHDDTDSVWGFNPASTKDSDSDKHRDFFGI-DDFGIKPIRTGSLSSESI-F 234
           +S W  AFDT+DD DSVWGF+ + ++D       D+FG  DDFG    R  S SS S   
Sbjct: 802 DSNWASAFDTNDDVDSVWGFDASKSQDG------DYFGSGDDFGGNTARADSPSSRSFGA 855

Query: 235 QKKSPF-FEDSVAGSP 249
           Q+KS F F+DSV  +P
Sbjct: 856 QRKSQFAFDDSVPSTP 871


>AT1G21630.1 | Symbols:  | calcium-binding EF hand family protein |
           chr1:7581457-7587796 FORWARD
          Length = 1218

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/266 (38%), Positives = 128/266 (48%), Gaps = 23/266 (8%)

Query: 2   ERGGSADGILQVRADRIQSDLDELMKGFKLNVARDMGXRXXXXXXXXXPIGWQPGIQEGA 61
           E G   D I++ R + IQS L+EL+K       +  G R         P GWQPGIQEGA
Sbjct: 703 EEGKLDDSIVKERTEHIQSGLEELIKNLN-ERCKQYGVRGKPTSLVELPFGWQPGIQEGA 761

Query: 62  AVWDEEWDKFEDEG--FANDLMLDMKNVSAPNSKSTIQDGSPTHDSLSNGDDKSGNFSRV 119
           A WDE+WDK EDEG  F  +L LD++NV AP  + +         S   G+D S  FS  
Sbjct: 762 ADWDEDWDKLEDEGFTFVKELTLDIQNVIAPPKEKSSAWRKEVDVSSKEGEDVS--FSDA 819

Query: 120 DGHGIEGESVYSHSED-ELARSPQSSLAGRNALGS--PSKAFSDVFAKST----DADAET 172
           D     G+   S  ED E +    S +  R+  GS   SK    + A S+    D  +E 
Sbjct: 820 DSK--TGKKQSSGEEDSEQSEGKTSDVDARDKNGSLDDSKVRKGIEADSSPRTKDTRSEN 877

Query: 173 HRSFDESTWGA-----FDTHDDTDSVWGFNPASTKDSDSDKH----RDFFGIDDFGIKPI 223
                EST  A     +D+HD+TDSV   NP + KD D  K+       FG DDF IKPI
Sbjct: 878 GHDDGESTASAGKTVNYDSHDETDSVSSVNPDNGKDKDHGKYDSGFGFGFGFDDFSIKPI 937

Query: 224 RTGSLSSESIFQKKSPFFEDSVAGSP 249
           +TGS  S      K   F DSV   P
Sbjct: 938 KTGSTISNDFLPPKLSIFADSVPSPP 963