Jatropha Genome Database

JcCA0151971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151971.10 + phase: 0 /partial/short
         (49 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63680.1 | Symbols: ATMURE, PDE316, MURE | MURE; ATP binding ...    67   2e-12

>AT1G63680.1 | Symbols: ATMURE, PDE316, MURE | MURE; ATP binding /
           acid-amino acid ligase/ ligase | chr1:23614461-23617247
           FORWARD
          Length = 772

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/49 (63%), Positives = 32/49 (65%)

Query: 1   VVAGKGHETYQIXXXXXXXXXXXXXXXXALQYVDELHQAGIDTSEFPWR 49
           VVAGKGHE YQ+                ALQYVDELHQAGIDTSEFPWR
Sbjct: 719 VVAGKGHEAYQLEGEKKEFYDDREECREALQYVDELHQAGIDTSEFPWR 767