Jatropha Genome Database
- JcCA0151751.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0151751.20 - phase: 0
(232 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73390.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 254 3e-68
AT1G73390.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 254 3e-68
AT1G73390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 254 3e-68
AT1G17940.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 247 5e-66
AT1G73390.4 | Symbols: | unknown protein | chr1:27591486-275941... 178 2e-45
AT5G14020.1 | Symbols: | INVOLVED IN: N-terminal protein myrist... 146 8e-36
>AT1G73390.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95
proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:27591079-27594148 REVERSE
Length = 419
Score = 254 bits (649), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 156/225 (69%), Gaps = 4/225 (1%)
Query: 5 FLDAAGYLNFSIQHVLPRFPPDIRKDLPLDLGEGVLRALCLQALGQGVDLQLGMAIDSVK 64
FL AAGYL+ +++HVLP F + R+ LP+DL EG LRALCLQALGQGVD+QLGMAIDS K
Sbjct: 182 FLKAAGYLDCAVKHVLPHFSTEQRRSLPIDLAEGALRALCLQALGQGVDIQLGMAIDSAK 241
Query: 65 ATLAVKRRLACEMVKYWHQAQESIVDLPLANGWGEKHKLFIQWXXXXXXXXXXXXHXXXX 124
ATLAVKRRL+CEMVKYW QAQ+++++LPLANGWGEKH LF++W H
Sbjct: 242 ATLAVKRRLSCEMVKYWQQAQDNLMNLPLANGWGEKHMLFVKWKYVEAKAAAYYYHGLIL 301
Query: 125 XXXXXXXSTEMXXXXXXXXXMLWHGSRKACESFHRNPPVSRNPILWGTSKFLSEKIPRDK 184
S M S+KA E+F+ + P SR P L+GT K+LSEKIP++
Sbjct: 302 DEGNTEKSHGMAVAALQAADECLKESKKASEAFNTSSPTSRTPSLFGTMKYLSEKIPKET 361
Query: 185 SS----NEDQHNHEMILRTAPALPEFALSLEPDEYQLPAVDPSWN 225
SS N D +++E I+ TAP LP+FAL+L+PDEYQLP+VD SW+
Sbjct: 362 SSKVRINRDLYSYEKIMETAPTLPDFALALKPDEYQLPSVDASWS 406
>AT1G73390.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95
proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:27591079-27594148 REVERSE
Length = 419
Score = 254 bits (649), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 156/225 (69%), Gaps = 4/225 (1%)
Query: 5 FLDAAGYLNFSIQHVLPRFPPDIRKDLPLDLGEGVLRALCLQALGQGVDLQLGMAIDSVK 64
FL AAGYL+ +++HVLP F + R+ LP+DL EG LRALCLQALGQGVD+QLGMAIDS K
Sbjct: 182 FLKAAGYLDCAVKHVLPHFSTEQRRSLPIDLAEGALRALCLQALGQGVDIQLGMAIDSAK 241
Query: 65 ATLAVKRRLACEMVKYWHQAQESIVDLPLANGWGEKHKLFIQWXXXXXXXXXXXXHXXXX 124
ATLAVKRRL+CEMVKYW QAQ+++++LPLANGWGEKH LF++W H
Sbjct: 242 ATLAVKRRLSCEMVKYWQQAQDNLMNLPLANGWGEKHMLFVKWKYVEAKAAAYYYHGLIL 301
Query: 125 XXXXXXXSTEMXXXXXXXXXMLWHGSRKACESFHRNPPVSRNPILWGTSKFLSEKIPRDK 184
S M S+KA E+F+ + P SR P L+GT K+LSEKIP++
Sbjct: 302 DEGNTEKSHGMAVAALQAADECLKESKKASEAFNTSSPTSRTPSLFGTMKYLSEKIPKET 361
Query: 185 SS----NEDQHNHEMILRTAPALPEFALSLEPDEYQLPAVDPSWN 225
SS N D +++E I+ TAP LP+FAL+L+PDEYQLP+VD SW+
Sbjct: 362 SSKVRINRDLYSYEKIMETAPTLPDFALALKPDEYQLPSVDASWS 406
>AT1G73390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED
IN: cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G17940.1); Has 95 Blast hits to 95 proteins in
25 species: Archae - 0; Bacteria - 0; Metazoa - 19;
Fungi - 23; Plants - 53; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr1:27591079-27594148 REVERSE
Length = 419
Score = 254 bits (649), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 156/225 (69%), Gaps = 4/225 (1%)
Query: 5 FLDAAGYLNFSIQHVLPRFPPDIRKDLPLDLGEGVLRALCLQALGQGVDLQLGMAIDSVK 64
FL AAGYL+ +++HVLP F + R+ LP+DL EG LRALCLQALGQGVD+QLGMAIDS K
Sbjct: 182 FLKAAGYLDCAVKHVLPHFSTEQRRSLPIDLAEGALRALCLQALGQGVDIQLGMAIDSAK 241
Query: 65 ATLAVKRRLACEMVKYWHQAQESIVDLPLANGWGEKHKLFIQWXXXXXXXXXXXXHXXXX 124
ATLAVKRRL+CEMVKYW QAQ+++++LPLANGWGEKH LF++W H
Sbjct: 242 ATLAVKRRLSCEMVKYWQQAQDNLMNLPLANGWGEKHMLFVKWKYVEAKAAAYYYHGLIL 301
Query: 125 XXXXXXXSTEMXXXXXXXXXMLWHGSRKACESFHRNPPVSRNPILWGTSKFLSEKIPRDK 184
S M S+KA E+F+ + P SR P L+GT K+LSEKIP++
Sbjct: 302 DEGNTEKSHGMAVAALQAADECLKESKKASEAFNTSSPTSRTPSLFGTMKYLSEKIPKET 361
Query: 185 SS----NEDQHNHEMILRTAPALPEFALSLEPDEYQLPAVDPSWN 225
SS N D +++E I+ TAP LP+FAL+L+PDEYQLP+VD SW+
Sbjct: 362 SSKVRINRDLYSYEKIMETAPTLPDFALALKPDEYQLPSVDASWS 406
>AT1G17940.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED
IN: cellular_component unknown; CONTAINS InterPro
DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G73390.3); Has 75 Blast hits to 75 proteins in
21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 22; Plants - 53; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr1:6169621-6172035 REVERSE
Length = 405
Score = 247 bits (630), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 120/223 (53%), Positives = 154/223 (69%), Gaps = 4/223 (1%)
Query: 5 FLDAAGYLNFSIQHVLPRFPPDIRKDLPLDLGEGVLRALCLQALGQGVDLQLGMAIDSVK 64
FL AAGYL+ +++HVLP+F + R+ LP+DL EG LRALCLQALGQGVD+QLGMAIDS K
Sbjct: 183 FLKAAGYLDCAVKHVLPQFSAEQRRSLPVDLAEGTLRALCLQALGQGVDIQLGMAIDSSK 242
Query: 65 ATLAVKRRLACEMVKYWHQAQESIVDLPLANGWGEKHKLFIQWXXXXXXXXXXXXHXXXX 124
ATLAVKRRL+CEMVKYW QAQ+++++LPLANGWGEKH LF++W H
Sbjct: 243 ATLAVKRRLSCEMVKYWQQAQDNLMNLPLANGWGEKHGLFVKWKYVEAKAAAYYYHGLIL 302
Query: 125 XXXXXXXSTEMXXXXXXXXXMLWHGSRKACESFHRNPPVSRNPILWGTSKFLSEKIPRDK 184
S M + S+KA E+F+ + P SR P L+GT K+L+EKIP+D
Sbjct: 303 DEGNTEKSHGMAVAALQAADECFKESKKASEAFNASAPTSRTPPLFGTMKYLTEKIPKDT 362
Query: 185 SS----NEDQHNHEMILRTAPALPEFALSLEPDEYQLPAVDPS 223
SS N D +++E I+ TAP LP+FAL+L+PDEYQLP + S
Sbjct: 363 SSKVRINRDLYSYEKIMETAPTLPDFALALKPDEYQLPLAEAS 405
>AT1G73390.4 | Symbols: | unknown protein | chr1:27591486-27594148
REVERSE
Length = 342
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 106/161 (65%)
Query: 5 FLDAAGYLNFSIQHVLPRFPPDIRKDLPLDLGEGVLRALCLQALGQGVDLQLGMAIDSVK 64
FL AAGYL+ +++HVLP F + R+ LP+DL EG LRALCLQALGQGVD+QLGMAIDS K
Sbjct: 182 FLKAAGYLDCAVKHVLPHFSTEQRRSLPIDLAEGALRALCLQALGQGVDIQLGMAIDSAK 241
Query: 65 ATLAVKRRLACEMVKYWHQAQESIVDLPLANGWGEKHKLFIQWXXXXXXXXXXXXHXXXX 124
ATLAVKRRL+CEMVKYW QAQ+++++LPLANGWGEKH LF++W H
Sbjct: 242 ATLAVKRRLSCEMVKYWQQAQDNLMNLPLANGWGEKHMLFVKWKYVEAKAAAYYYHGLIL 301
Query: 125 XXXXXXXSTEMXXXXXXXXXMLWHGSRKACESFHRNPPVSR 165
S M S+KA E+F+ + P SR
Sbjct: 302 DEGNTEKSHGMAVAALQAADECLKESKKASEAFNTSSPTSR 342
>AT5G14020.1 | Symbols: | INVOLVED IN: N-terminal protein
myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root;
CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G73390.3); Has 53 Blast hits to 53
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr5:4523730-4525819 REVERSE
Length = 401
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 117/223 (52%), Gaps = 6/223 (2%)
Query: 5 FLDAAGYLNFSIQHVLPRFPPDIRKDLPLDLGEGVLRALCLQALGQGVDLQLGMAIDSVK 64
L A+GYL F ++ +L + P DI+ LP D+ E VL+ L +QALGQG ++QLG+A+DS K
Sbjct: 174 LLKASGYLEFCVREILTQLPHDIKSKLPDDMQESVLQTLSIQALGQGTEIQLGLAVDSQK 233
Query: 65 ATLAVKRRLACEMVKYWHQAQESIVDL-PLANGWGEKHKLFIQWXXXXXXXXXXXXHXXX 123
ATL+VKRR+ACE V Y+ QA + +++G +K FI W H
Sbjct: 234 ATLSVKRRIACEQVIYFTQAYHCLSSCEAVSHGCAKKLLRFIYWKFLEAKAAAYYYHGLV 293
Query: 124 XXXXXXXXSTEMXXXXXXXXXMLWHGSRKACESFHRNPPVSRNPILWGTSKFLSEKIPRD 183
+ S+KAC SF PPV+R P +WG K LS+KIP
Sbjct: 294 TDKGSEPACHLSAVCCFLAAAEILGESKKACLSFCLAPPVTRAPPMWGVMKHLSQKIPEV 353
Query: 184 KSSNEDQHNH-----EMILRTAPALPEFALSLEPDEYQLPAVD 221
+ + E ++ P LP+F LSL PD+++LP ++
Sbjct: 354 AFRKSQTYGYLLEEEEKAMQCLPELPDFQLSLRPDDFELPEIE 396