Jatropha Genome Database

JcCA0151401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151401.10 - phase: 2 /pseudo/partial
         (271 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21470.1 | Symbols: ATFMN/FHY | ATFMN/FHY (riboflavin kinase/...   367   e-102
AT4G25840.1 | Symbols: GPP1 | GPP1 (glycerol-3-phosphatase 1); c...   119   2e-27
AT5G57440.1 | Symbols: GS1, GPP2 | GS1; catalytic/ hydrolase | c...   117   9e-27
AT4G11570.2 | Symbols:  | haloacid dehalogenase-like hydrolase f...    59   3e-09
AT4G11570.1 | Symbols:  | haloacid dehalogenase-like hydrolase f...    59   3e-09
AT1G56500.1 | Symbols:  | haloacid dehalogenase-like hydrolase f...    57   1e-08
AT3G48420.1 | Symbols:  | haloacid dehalogenase-like hydrolase f...    50   1e-06
AT2G38740.1 | Symbols:  | haloacid dehalogenase-like hydrolase f...    49   3e-06

>AT4G21470.1 | Symbols: ATFMN/FHY | ATFMN/FHY (riboflavin kinase/FMN
           hydrolase); FMN adenylyltransferase/ riboflavin kinase |
           chr4:11431284-11433197 FORWARD
          Length = 379

 Score =  367 bits (941), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 209/264 (79%), Gaps = 9/264 (3%)

Query: 11  MASPVKKFVSAVILDLDGTLINT---------VCLIKYGKQWDGREATRIVGKTPLEAAT 61
           M++ +KK  S V++DLDGTLINT           L KYGKQWDGRE+ +IVGKTP+EAAT
Sbjct: 3   MSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAAT 62

Query: 62  AVVEDYGLPCSTEEFITELTPMFSAQMCKIKALPGANRLIKHLRGHNVPMALASNSPRAN 121
            +VEDY LPC  +EF +E  P+FSAQM KIK+LPGANRLI+HL+ H VP+ALASNS RAN
Sbjct: 63  TIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122

Query: 122 VESKISHHQGWKESFSVIIGGDEVKTGKPSPEIFLEAARRLNIDPSSCLVIEDSLPXXXX 181
           +ESKIS+H+GWKE FSVI+G DEV  GKPSP+IFLEAA+RL  DP+ CLVIEDS+P    
Sbjct: 123 IESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMA 182

Query: 182 XXXXXXXXXXXPSFPKQSHLYTSADEVMNSLLDLRPEKWGLPAFEDWIEDTLPVEPWHIG 241
                      PS PKQ+HLYTSADEV+NSLLD+R EKWGLP F+DWIE+TLP++PWHIG
Sbjct: 183 GKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWHIG 242

Query: 242 GPVIKGFGRGSKVLGVPTANIFNR 265
           GPVIKGFGRGSKVLG+PTAN+  +
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLSTK 266


>AT4G25840.1 | Symbols: GPP1 | GPP1 (glycerol-3-phosphatase 1);
           catalytic/ hydrolase | chr4:13139026-13140719 FORWARD
          Length = 298

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 16/225 (7%)

Query: 19  VSAVILDLDGTLINT---------VCLIKYGKQWDGREATRIVGKTPLEAATAVVEDYGL 69
           ++ VI D+DG L++T           L +Y K +D     +++G+  +EAA   V++ G+
Sbjct: 71  ITHVIFDMDGLLLDTEKFYTEVQEKILARYNKTFDWSLKAKMMGRKAIEAARLFVDESGI 130

Query: 70  P--CSTEEFITELTPMFSAQMCKIKALPGANRLIKHLRGHNVPMALASNSPRANVESKIS 127
               S E+FI E   M          +PGA+RL++HL G  +P+ +A+ +   + + K  
Sbjct: 131 SDSLSAEDFIVERESMLQDLFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLKTQ 190

Query: 128 HHQGWKESFSVIIGGD--EVKTGKPSPEIFLEAARRLN---IDPSSCLVIEDSLPXXXXX 182
            H+        ++ GD  EVK GKP+P+ FL A+RR     +DP   LV ED+       
Sbjct: 191 RHRELFSLMHHVVRGDDPEVKEGKPAPDGFLAASRRFEDGPVDPRKVLVFEDAPSGVQAA 250

Query: 183 XXXXXXXXXXPSFPKQSHLYTSADEVMNSLLDLRPEKWGLPAFED 227
                     P           AD+V+ SLLD +PE+WGLP+F+D
Sbjct: 251 KNAGMNVIMVPDSRLDKSYCNVADQVLASLLDFKPEEWGLPSFQD 295


>AT5G57440.1 | Symbols: GS1, GPP2 | GS1; catalytic/ hydrolase |
           chr5:23271518-23272900 REVERSE
          Length = 240

 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 16/225 (7%)

Query: 19  VSAVILDLDGTLINT---------VCLIKYGKQWDGREATRIVGKTPLEAATAVVEDYGL 69
           ++ VI D+DG L++T         + L ++ K++D     +++G+  +EAA   VE+ G+
Sbjct: 14  ITHVIFDMDGLLLDTEKFYTEVQEIILARFNKKFDWSLKAKMMGRKAIEAARIFVEESGI 73

Query: 70  P--CSTEEFITELTPMFSAQMCKIKALPGANRLIKHLRGHNVPMALASNSPRANVESKIS 127
               S E+F+ E   M        + +PGA+RLIKHL   N+P+ +A+ +   + + K  
Sbjct: 74  SDSLSAEDFLVERESMLQDLFPTSELMPGASRLIKHLHVKNIPICIATGTHTRHYDLKTQ 133

Query: 128 HHQGWKESFSVIIGGD--EVKTGKPSPEIFLEAARRLN---IDPSSCLVIEDSLPXXXXX 182
            H+        ++ GD  EVK GKP+P+ FL AARR     +D    LV ED+       
Sbjct: 134 RHRELFSLMHHVVRGDDPEVKQGKPAPDGFLAAARRFKDGPVDSQKVLVFEDAPSGVLAA 193

Query: 183 XXXXXXXXXXPSFPKQSHLYTSADEVMNSLLDLRPEKWGLPAFED 227
                     P           AD+++ SL+D +PE+WGLP FED
Sbjct: 194 KNAGMNVVMVPDPRLDISHQDVADQIITSLVDFKPEEWGLPPFED 238


>AT4G11570.2 | Symbols:  | haloacid dehalogenase-like hydrolase
           family protein | chr4:7004743-7005864 FORWARD
          Length = 373

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 96  GANRLIKHLRGHNVPMALASNSPRANVESKISHHQGWKESFSVIIGGDEVKTGKPSPEIF 155
           G+   +  L  + +PMAL S  PR  +E+ +    G ++ FSVI+  ++V  GKP PE+F
Sbjct: 216 GSQEFVNVLMNNKIPMALVSTRPRETLENAVGSI-GIRKFFSVIVASEDVYRGKPDPEMF 274

Query: 156 LEAARRLNIDPSSCLVIEDS 175
           + AA+ L+  P  C+V  +S
Sbjct: 275 IYAAQLLDFIPERCIVFGNS 294


>AT4G11570.1 | Symbols:  | haloacid dehalogenase-like hydrolase
           family protein | chr4:7004743-7005864 FORWARD
          Length = 373

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 96  GANRLIKHLRGHNVPMALASNSPRANVESKISHHQGWKESFSVIIGGDEVKTGKPSPEIF 155
           G+   +  L  + +PMAL S  PR  +E+ +    G ++ FSVI+  ++V  GKP PE+F
Sbjct: 216 GSQEFVNVLMNNKIPMALVSTRPRETLENAVGSI-GIRKFFSVIVASEDVYRGKPDPEMF 274

Query: 156 LEAARRLNIDPSSCLVIEDS 175
           + AA+ L+  P  C+V  +S
Sbjct: 275 IYAAQLLDFIPERCIVFGNS 294


>AT1G56500.1 | Symbols:  | haloacid dehalogenase-like hydrolase
           family protein | chr1:21159775-21167092 FORWARD
          Length = 1055

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 29/179 (16%)

Query: 19  VSAVILDLDGTLINTVCLIKYGKQWDGREATRIVGKTPLE-------------------- 58
           VSAV+ D+DG L N+  L +       R A  +  +  +E                    
Sbjct: 74  VSAVLFDMDGVLCNSEDLSR-------RAAVDVFTEMGVEVTVDDFVPFMGTGEAKFLGG 126

Query: 59  -AATAVVEDYGLPCSTEEFITELTPMFSAQMCKIKALPGANRLIKHLRGHNVPMALASNS 117
            A+   V+ +    + E F       ++     I   PGA  L+   +   + +A+AS++
Sbjct: 127 VASVKEVKGFDPDAAKERFFEIYLDKYAKPESGI-GFPGALELVTECKNKGLKVAVASSA 185

Query: 118 PRANVESKISHHQGWKESFSVIIGGDEVKTGKPSPEIFLEAARRLNIDPSSCLVIEDSL 176
            R  V++ +         F  I+  D  +  KP+P+IFL AA+ L +  S C+VIED+L
Sbjct: 186 DRIKVDANLKAAGLSLTMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDAL 244


>AT3G48420.1 | Symbols:  | haloacid dehalogenase-like hydrolase
           family protein | chr3:17929743-17931551 FORWARD
          Length = 319

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 95  PGANRLIKHLRGHNVPMALASNSPRANVESKISHHQGWKESFSV-IIGGDEVKTGKPSPE 153
           PG  +L+     + V +A+ S S    V + +S   G + +  + I  GD V   KP P 
Sbjct: 178 PGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIKIFAGDVVPKKKPDPA 237

Query: 154 IFLEAARRLNIDPSSCLVIEDS 175
           I+  AA  L +DPS C+V+EDS
Sbjct: 238 IYNLAAETLGVDPSKCVVVEDS 259


>AT2G38740.1 | Symbols:  | haloacid dehalogenase-like hydrolase
           family protein | chr2:16194639-16195995 REVERSE
          Length = 244

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 24/176 (13%)

Query: 19  VSAVILDLDGTLINT--VCLIKY-----------GKQWDGRE-ATRIVGKTPLEAATAVV 64
           + A++ D+DGTL ++  + LI +           G   D +     I GK   E A  + 
Sbjct: 22  LEAILFDVDGTLCDSDPIHLIAFQELLQEIGFNNGVPIDEKFFVENIAGKHNSEIALLLF 81

Query: 65  ED---YGLPCSTEEFITELTPMFSAQMC-KIKALPGANRLIKHLRGHNVPMALASNSPRA 120
            D    GL     +F  E   ++   +  KIK L G  +L K +    +  A  +N+P+ 
Sbjct: 82  PDDVSRGL-----KFCDEKEALYRKIVAEKIKPLDGLIKLTKWIEDRGLKRAAVTNAPKE 136

Query: 121 NVESKISHHQGWKESFSVIIGGDEVKTGKPSPEIFLEAARRLNIDPSSCLVIEDSL 176
           N E  IS   G  + F  +I G E +  KP P  +L+A   LN+     LV EDS+
Sbjct: 137 NAELMISK-LGLTDFFQAVILGSECEFPKPHPGPYLKALEVLNVSKEHTLVFEDSI 191