Jatropha Genome Database

JcCA0151191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151191.20 + phase: 0 /partial
         (265 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G08900.1 | Symbols:  | arginase | chr4:5703499-5705180 FORWARD     471   e-133
AT4G08870.1 | Symbols:  | arginase, putative | chr4:5646654-5648...   456   e-128
AT4G08870.2 | Symbols:  | arginase, putative | chr4:5647417-5648...   433   e-122

>AT4G08900.1 | Symbols:  | arginase | chr4:5703499-5705180 FORWARD
          Length = 342

 Score =  471 bits (1212), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/266 (86%), Positives = 248/266 (93%), Gaps = 3/266 (1%)

Query: 3   VIGQRGIHYLQKLKAAN---IPTELIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVA 59
           +IG++GI+Y+ +L +A+   +    IEKGQNRVIDASLTLIRERAKLKGELVR LGGA A
Sbjct: 4   IIGRKGINYIHRLNSASFTSVSASSIEKGQNRVIDASLTLIRERAKLKGELVRLLGGAKA 63

Query: 60  SSSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSSTEEGKELNDPRVLTDVGDVPVQ 119
           S+SLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNS+TEEGKEL DPRVLTDVGDVPVQ
Sbjct: 64  STSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSATEEGKELKDPRVLTDVGDVPVQ 123

Query: 120 EIRDCDVEDDRLMNVISDSVKLVMEEDPLRPLVLGGDHSISFPVVRAVSEKLGGPVDILH 179
           EIRDC V+DDRLMNVIS+SVKLVMEE+PLRPLVLGGDHSIS+PVVRAVSEKLGGPVDILH
Sbjct: 124 EIRDCGVDDDRLMNVISESVKLVMEEEPLRPLVLGGDHSISYPVVRAVSEKLGGPVDILH 183

Query: 180 LDAHPDIYHAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEM 239
           LDAHPDIY  FEGNKYSHASSFARIMEGGYARRLLQVGIRSI +EGREQGKRFGVEQYEM
Sbjct: 184 LDAHPDIYDCFEGNKYSHASSFARIMEGGYARRLLQVGIRSINQEGREQGKRFGVEQYEM 243

Query: 240 RTFSRDRQLLENLKLGEGAKGVYISI 265
           RTFS+DR +LENLKLGEG KGVYISI
Sbjct: 244 RTFSKDRPMLENLKLGEGVKGVYISI 269


>AT4G08870.1 | Symbols:  | arginase, putative | chr4:5646654-5648693
           REVERSE
          Length = 344

 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/271 (81%), Positives = 245/271 (90%), Gaps = 6/271 (2%)

Query: 1   MSVIGQRGIHYLQKLKAA------NIPTELIEKGQNRVIDASLTLIRERAKLKGELVRAL 54
           M  IGQRG+ Y Q+L AA      ++PT L+E GQNRVIDASLTLIRERAKLKGELVR +
Sbjct: 1   MWKIGQRGVPYFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLKGELVRLI 60

Query: 55  GGAVASSSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSSTEEGKELNDPRVLTDVG 114
           GGA A+++LLGVPLGHNSSFL+GPA APP +REAIWCGSTNS+TEEGKEL DPRVL+DVG
Sbjct: 61  GGAKATTALLGVPLGHNSSFLEGPALAPPHVREAIWCGSTNSTTEEGKELKDPRVLSDVG 120

Query: 115 DVPVQEIRDCDVEDDRLMNVISDSVKLVMEEDPLRPLVLGGDHSISFPVVRAVSEKLGGP 174
           D+PVQEIR+  V+DDRLM V+S+SVKLVMEE+PLRPLV+GGDHSIS+PVVRAVSEKLGGP
Sbjct: 121 DIPVQEIREMGVDDDRLMKVVSESVKLVMEEEPLRPLVIGGDHSISYPVVRAVSEKLGGP 180

Query: 175 VDILHLDAHPDIYHAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGV 234
           VDILHLDAHPDIY  FEGN YSHASSFARIMEGGYARRLLQVGIRSI KEGREQGKRFGV
Sbjct: 181 VDILHLDAHPDIYDRFEGNYYSHASSFARIMEGGYARRLLQVGIRSINKEGREQGKRFGV 240

Query: 235 EQYEMRTFSRDRQLLENLKLGEGAKGVYISI 265
           EQYEMRTFS+DRQ+LENLKLGEG KGVYISI
Sbjct: 241 EQYEMRTFSKDRQMLENLKLGEGVKGVYISI 271


>AT4G08870.2 | Symbols:  | arginase, putative | chr4:5647417-5648693
           REVERSE
          Length = 263

 Score =  433 bits (1113), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/258 (81%), Positives = 233/258 (90%), Gaps = 6/258 (2%)

Query: 1   MSVIGQRGIHYLQKLKAA------NIPTELIEKGQNRVIDASLTLIRERAKLKGELVRAL 54
           M  IGQRG+ Y Q+L AA      ++PT L+E GQNRVIDASLTLIRERAKLKGELVR +
Sbjct: 1   MWKIGQRGVPYFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLKGELVRLI 60

Query: 55  GGAVASSSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSSTEEGKELNDPRVLTDVG 114
           GGA A+++LLGVPLGHNSSFL+GPA APP +REAIWCGSTNS+TEEGKEL DPRVL+DVG
Sbjct: 61  GGAKATTALLGVPLGHNSSFLEGPALAPPHVREAIWCGSTNSTTEEGKELKDPRVLSDVG 120

Query: 115 DVPVQEIRDCDVEDDRLMNVISDSVKLVMEEDPLRPLVLGGDHSISFPVVRAVSEKLGGP 174
           D+PVQEIR+  V+DDRLM V+S+SVKLVMEE+PLRPLV+GGDHSIS+PVVRAVSEKLGGP
Sbjct: 121 DIPVQEIREMGVDDDRLMKVVSESVKLVMEEEPLRPLVIGGDHSISYPVVRAVSEKLGGP 180

Query: 175 VDILHLDAHPDIYHAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGV 234
           VDILHLDAHPDIY  FEGN YSHASSFARIMEGGYARRLLQVGIRSI KEGREQGKRFGV
Sbjct: 181 VDILHLDAHPDIYDRFEGNYYSHASSFARIMEGGYARRLLQVGIRSINKEGREQGKRFGV 240

Query: 235 EQYEMRTFSRDRQLLENL 252
           EQYEMRTFS+DRQ+LENL
Sbjct: 241 EQYEMRTFSKDRQMLENL 258