Jatropha Genome Database

JcCA0151191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151191.10 - phase: 0 
         (551 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02020.2 | Symbols:  | nitroreductase family protein | chr1:3...   619   e-177
AT1G02020.1 | Symbols:  | nitroreductase family protein | chr1:3...   615   e-176

>AT1G02020.2 | Symbols:  | nitroreductase family protein |
           chr1:353214-354845 REVERSE
          Length = 543

 Score =  619 bits (1596), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 313/495 (63%), Positives = 364/495 (73%), Gaps = 22/495 (4%)

Query: 54  ITNPKEDKTPNPDTQKLSQVIKYHNQTKHNFTNYARGPRGLDWANQPNPFRRYISAPLLS 113
           + NP +D +    +  L  V+KYHNQTKH+   YARGPRGLDWANQPNPFRRY+SAPLL 
Sbjct: 57  VENPNKDDS----SSSLELVLKYHNQTKHSLNGYARGPRGLDWANQPNPFRRYLSAPLLP 112

Query: 114 LQHFPTDNQTASSAADSAPLYHSIFNSLXXXXXXXXXXXXQLFYDSLALSAWKTTGFSTW 173
           LQH    N      +DS PLY ++F+SL             LFY SLALSAWKTTG STW
Sbjct: 113 LQH---PNHDIDDDSDS-PLYSTLFDSLPPPKPISLPTISHLFYHSLALSAWKTTGSSTW 168

Query: 174 SLRVNPSSGNLHPTEAYLIAPPIESLSSSSFVAHYAPKEHALELRATIPSDFFPKFFPRD 233
            LRVNPSSGNLHPTEAYLIAPPI SLS S+FV+HYAPKEH+LE+RA IPS FFP FFP +
Sbjct: 169 PLRVNPSSGNLHPTEAYLIAPPIPSLSQSAFVSHYAPKEHSLEVRAHIPSSFFPNFFPEN 228

Query: 234 SFLIGISSIFWREAWKYGERAFRYCNHDVGHXXXXXXXXXXGLGWDVKLLDGLGHKELER 293
           SFLIGISSIFWREAWKYGERAFRYCNHDVGH           LGWD+KLLD  G  +L+R
Sbjct: 229 SFLIGISSIFWREAWKYGERAFRYCNHDVGHAIAALSIAAADLGWDLKLLDAFGADDLKR 288

Query: 294 LMGLEIYQSFQVPDGPIKGKIPDIEFEHSDCLLLVFPKGAT--DFDVNYKELSSALMEFK 351
           LMGL     FQ+P+G  K ++P+IEFEH DCLLLVFP G +    +++Y  +SSAL +F 
Sbjct: 289 LMGLP---EFQLPEGKGKAELPEIEFEHPDCLLLVFPNGTSREHLNLDYLAISSALRDFP 345

Query: 352 NLDWKGKPNLLSKEHVCWDIIYRTAEAVKKP----LTLGERFLIDPFQGS-GVCSDGSYK 406
           +L+W G PN LSKEH+CWDIIYRTA+AV+KP     T      +  F  S  + S  SY 
Sbjct: 346 SLEWTGNPNTLSKEHLCWDIIYRTAKAVEKPPLIYSTSSSSIDVASFTSSRALFSHSSYN 405

Query: 407 GFTVREIVRKRRSAVDMDGVTKIDRETFYQILLHCVPSGSGTGESQKRQLALPFRVLSWD 466
             TVR++VR RRSAVDMD VT ID  +FYQ+L+HC+PS   TGESQK QLALPFR L WD
Sbjct: 406 KLTVRQVVRTRRSAVDMDAVTCIDMSSFYQMLMHCLPS---TGESQKEQLALPFRALPWD 462

Query: 467 -AEVHAALFVHRVTGLPKGLYFLVRNEDHFHELKKATRAGFKWEKPEGCPDDLPLYELAR 525
            AEVH ALFVHRV+GLPKGLY LVRNEDH  +LK ATR  F+W KP+GCPD+LPLY+LA 
Sbjct: 463 TAEVHLALFVHRVSGLPKGLYLLVRNEDHLSDLKTATRPEFEWTKPDGCPDNLPLYKLAE 522

Query: 526 GDCQQIAKQLSCHQV 540
           GDCQ++AK LSCHQV
Sbjct: 523 GDCQRLAKGLSCHQV 537


>AT1G02020.1 | Symbols:  | nitroreductase family protein |
           chr1:352842-354845 REVERSE
          Length = 642

 Score =  615 bits (1586), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 312/494 (63%), Positives = 363/494 (73%), Gaps = 22/494 (4%)

Query: 54  ITNPKEDKTPNPDTQKLSQVIKYHNQTKHNFTNYARGPRGLDWANQPNPFRRYISAPLLS 113
           + NP +D +    +  L  V+KYHNQTKH+   YARGPRGLDWANQPNPFRRY+SAPLL 
Sbjct: 57  VENPNKDDS----SSSLELVLKYHNQTKHSLNGYARGPRGLDWANQPNPFRRYLSAPLLP 112

Query: 114 LQHFPTDNQTASSAADSAPLYHSIFNSLXXXXXXXXXXXXQLFYDSLALSAWKTTGFSTW 173
           LQH    N      +DS PLY ++F+SL             LFY SLALSAWKTTG STW
Sbjct: 113 LQH---PNHDIDDDSDS-PLYSTLFDSLPPPKPISLPTISHLFYHSLALSAWKTTGSSTW 168

Query: 174 SLRVNPSSGNLHPTEAYLIAPPIESLSSSSFVAHYAPKEHALELRATIPSDFFPKFFPRD 233
            LRVNPSSGNLHPTEAYLIAPPI SLS S+FV+HYAPKEH+LE+RA IPS FFP FFP +
Sbjct: 169 PLRVNPSSGNLHPTEAYLIAPPIPSLSQSAFVSHYAPKEHSLEVRAHIPSSFFPNFFPEN 228

Query: 234 SFLIGISSIFWREAWKYGERAFRYCNHDVGHXXXXXXXXXXGLGWDVKLLDGLGHKELER 293
           SFLIGISSIFWREAWKYGERAFRYCNHDVGH           LGWD+KLLD  G  +L+R
Sbjct: 229 SFLIGISSIFWREAWKYGERAFRYCNHDVGHAIAALSIAAADLGWDLKLLDAFGADDLKR 288

Query: 294 LMGLEIYQSFQVPDGPIKGKIPDIEFEHSDCLLLVFPKGAT--DFDVNYKELSSALMEFK 351
           LMGL     FQ+P+G  K ++P+IEFEH DCLLLVFP G +    +++Y  +SSAL +F 
Sbjct: 289 LMGLP---EFQLPEGKGKAELPEIEFEHPDCLLLVFPNGTSREHLNLDYLAISSALRDFP 345

Query: 352 NLDWKGKPNLLSKEHVCWDIIYRTAEAVKKP----LTLGERFLIDPFQGS-GVCSDGSYK 406
           +L+W G PN LSKEH+CWDIIYRTA+AV+KP     T      +  F  S  + S  SY 
Sbjct: 346 SLEWTGNPNTLSKEHLCWDIIYRTAKAVEKPPLIYSTSSSSIDVASFTSSRALFSHSSYN 405

Query: 407 GFTVREIVRKRRSAVDMDGVTKIDRETFYQILLHCVPSGSGTGESQKRQLALPFRVLSWD 466
             TVR++VR RRSAVDMD VT ID  +FYQ+L+HC+PS   TGESQK QLALPFR L WD
Sbjct: 406 KLTVRQVVRTRRSAVDMDAVTCIDMSSFYQMLMHCLPS---TGESQKEQLALPFRALPWD 462

Query: 467 -AEVHAALFVHRVTGLPKGLYFLVRNEDHFHELKKATRAGFKWEKPEGCPDDLPLYELAR 525
            AEVH ALFVHRV+GLPKGLY LVRNEDH  +LK ATR  F+W KP+GCPD+LPLY+LA 
Sbjct: 463 TAEVHLALFVHRVSGLPKGLYLLVRNEDHLSDLKTATRPEFEWTKPDGCPDNLPLYKLAE 522

Query: 526 GDCQQIAKQLSCHQ 539
           GDCQ++AK LSCHQ
Sbjct: 523 GDCQRLAKGLSCHQ 536