Jatropha Genome Database

JcCA0151141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151141.10 - phase: 0 /partial
         (521 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66030.1 | Symbols: ATGRIP, GRIP | ATGRIP; protein binding | ...   511   e-145
AT5G66030.2 | Symbols: ATGRIP, GRIP | ATGRIP; protein binding | ...   511   e-145

>AT5G66030.1 | Symbols: ATGRIP, GRIP | ATGRIP; protein binding |
           chr5:26405133-26409888 REVERSE
          Length = 788

 Score =  511 bits (1317), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 301/514 (58%), Positives = 373/514 (72%), Gaps = 24/514 (4%)

Query: 8   VGETTETQTEDSPLDPEKQLSDIPHGKNENLVKENGLHDGIPLVENTQEQLVQMVIELKF 67
           VGE  E+      +  +K+L+D     NE L  ENG            +QL+QM+ EL+ 
Sbjct: 10  VGEEEESHV----IKEDKELND---ASNETLT-ENG------------DQLLQMIAELRL 49

Query: 68  QNEFLKSQFEGLKNNQSASEESQQRTEVSDQKTVGSTDVXXXXXXXXXXXXXXXXXKQTR 127
           +N+FL+SQFEGLK+ + A   S Q+ E   Q    S  +                 KQTR
Sbjct: 50  ENDFLRSQFEGLKD-EVAQGRSLQKAE---QVEADSAQLKQLQEQVASLSREIDVEKQTR 105

Query: 128 GAAEVALNHLREAYSEADAKAQELLTKLTEAQQKLDQEIKEREEKYSELDSKFQRLHKRA 187
            AAE AL HLREAYSEADAK+QE  +K ++ +QKLDQEIKER+EKY++LD+KF RLHKRA
Sbjct: 106 VAAEQALEHLREAYSEADAKSQEYSSKFSQVEQKLDQEIKERDEKYADLDAKFTRLHKRA 165

Query: 188 KQRIQEVQKEKDDLEARFRDVNETAERASSQHSALQQELERTRQQANDALRAMDAERQQL 247
           KQRIQE+QKEKDDL+ARFR+VNETAERASSQHS++QQELERTRQQAN+AL+AMDAERQQL
Sbjct: 166 KQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELERTRQQANEALKAMDAERQQL 225

Query: 248 RSANNKLRDNIEELRRSFQPKENALEALQQTLLEKEQMLEDMRGLLQSAEEKRQASIAEL 307
           RSANNKLRD IEELR S QPKEN +E LQQ+LL+K+Q+LED++  LQ+ EE++Q ++ EL
Sbjct: 226 RSANNKLRDTIEELRGSLQPKENKIETLQQSLLDKDQILEDLKKQLQAVEERKQIAVTEL 285

Query: 308 SAKHQKNIENLEGQLNDALADRTKATETISSLQVLIAEKESEIAEMDAASSGEVARLRAA 367
           SAKHQKN+E LE Q+ DAL++R KA ETISSLQVL+AEKES+IAEM+AA++GE ARLRAA
Sbjct: 286 SAKHQKNLEGLEAQVVDALSERDKAAETISSLQVLLAEKESKIAEMEAAATGEAARLRAA 345

Query: 368 LESVKGXXXXXXXXXXXXXXXXXXXSQGLKMKLEIAESNCIRAEIEAAKMRSQLESEVSV 427
            E++KG                      LK KLEIAESN ++AEIE AKMRSQL SE+S+
Sbjct: 346 AETLKGELAHLKSENEKEKETWEASCDALKSKLEIAESNYLQAEIEVAKMRSQLGSEMSM 405

Query: 428 QRQMLNKKDAELLAAKEEINRLETEFSSYKVRAHALLQRKDSELAAAMDSEQLRXXXXXX 487
           Q Q+L+ KDAEL  A+EEINRL++EFSSYK+RAHALLQ+KD ELAAA DSEQ++      
Sbjct: 406 QTQILSTKDAELKGAREEINRLQSEFSSYKIRAHALLQKKDMELAAAKDSEQIKSLEEAL 465

Query: 488 XXXXXXXSIISAERDKALQDLQDALAHRDKELAE 521
                   ++SAERD+A QDLQ ALA  +KEL E
Sbjct: 466 KEAEKEVYLVSAERDRAQQDLQSALASLEKELEE 499


>AT5G66030.2 | Symbols: ATGRIP, GRIP | ATGRIP; protein binding |
           chr5:26405133-26409888 REVERSE
          Length = 765

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 301/514 (58%), Positives = 373/514 (72%), Gaps = 24/514 (4%)

Query: 8   VGETTETQTEDSPLDPEKQLSDIPHGKNENLVKENGLHDGIPLVENTQEQLVQMVIELKF 67
           VGE  E+      +  +K+L+D     NE L  ENG            +QL+QM+ EL+ 
Sbjct: 10  VGEEEESHV----IKEDKELND---ASNETLT-ENG------------DQLLQMIAELRL 49

Query: 68  QNEFLKSQFEGLKNNQSASEESQQRTEVSDQKTVGSTDVXXXXXXXXXXXXXXXXXKQTR 127
           +N+FL+SQFEGLK+ + A   S Q+ E   Q    S  +                 KQTR
Sbjct: 50  ENDFLRSQFEGLKD-EVAQGRSLQKAE---QVEADSAQLKQLQEQVASLSREIDVEKQTR 105

Query: 128 GAAEVALNHLREAYSEADAKAQELLTKLTEAQQKLDQEIKEREEKYSELDSKFQRLHKRA 187
            AAE AL HLREAYSEADAK+QE  +K ++ +QKLDQEIKER+EKY++LD+KF RLHKRA
Sbjct: 106 VAAEQALEHLREAYSEADAKSQEYSSKFSQVEQKLDQEIKERDEKYADLDAKFTRLHKRA 165

Query: 188 KQRIQEVQKEKDDLEARFRDVNETAERASSQHSALQQELERTRQQANDALRAMDAERQQL 247
           KQRIQE+QKEKDDL+ARFR+VNETAERASSQHS++QQELERTRQQAN+AL+AMDAERQQL
Sbjct: 166 KQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELERTRQQANEALKAMDAERQQL 225

Query: 248 RSANNKLRDNIEELRRSFQPKENALEALQQTLLEKEQMLEDMRGLLQSAEEKRQASIAEL 307
           RSANNKLRD IEELR S QPKEN +E LQQ+LL+K+Q+LED++  LQ+ EE++Q ++ EL
Sbjct: 226 RSANNKLRDTIEELRGSLQPKENKIETLQQSLLDKDQILEDLKKQLQAVEERKQIAVTEL 285

Query: 308 SAKHQKNIENLEGQLNDALADRTKATETISSLQVLIAEKESEIAEMDAASSGEVARLRAA 367
           SAKHQKN+E LE Q+ DAL++R KA ETISSLQVL+AEKES+IAEM+AA++GE ARLRAA
Sbjct: 286 SAKHQKNLEGLEAQVVDALSERDKAAETISSLQVLLAEKESKIAEMEAAATGEAARLRAA 345

Query: 368 LESVKGXXXXXXXXXXXXXXXXXXXSQGLKMKLEIAESNCIRAEIEAAKMRSQLESEVSV 427
            E++KG                      LK KLEIAESN ++AEIE AKMRSQL SE+S+
Sbjct: 346 AETLKGELAHLKSENEKEKETWEASCDALKSKLEIAESNYLQAEIEVAKMRSQLGSEMSM 405

Query: 428 QRQMLNKKDAELLAAKEEINRLETEFSSYKVRAHALLQRKDSELAAAMDSEQLRXXXXXX 487
           Q Q+L+ KDAEL  A+EEINRL++EFSSYK+RAHALLQ+KD ELAAA DSEQ++      
Sbjct: 406 QTQILSTKDAELKGAREEINRLQSEFSSYKIRAHALLQKKDMELAAAKDSEQIKSLEEAL 465

Query: 488 XXXXXXXSIISAERDKALQDLQDALAHRDKELAE 521
                   ++SAERD+A QDLQ ALA  +KEL E
Sbjct: 466 KEAEKEVYLVSAERDRAQQDLQSALASLEKELEE 499