Jatropha Genome Database
- JcCA0150831.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0150831.10 + phase: 0
(841 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 1305 0.0
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 5e-48
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 5e-48
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 7e-47
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 173 5e-43
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 5e-38
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 1e-37
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 145 2e-34
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 2e-34
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 144 3e-34
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 3e-34
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 141 2e-33
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 2e-33
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 4e-33
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 3e-32
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 3e-32
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 137 4e-32
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 137 4e-32
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 8e-32
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 135 9e-32
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 1e-31
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 1e-31
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 1e-31
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 134 3e-31
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 5e-31
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 5e-31
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 5e-31
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 7e-31
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 3e-30
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 6e-30
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 129 8e-30
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 9e-30
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 1e-29
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 1e-29
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 3e-29
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 4e-29
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 4e-29
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 126 6e-29
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 126 7e-29
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 7e-29
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 9e-29
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 2e-28
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 2e-28
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 3e-28
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 5e-28
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 5e-28
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 5e-28
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 5e-28
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 123 6e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 8e-28
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 122 9e-28
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 121 2e-27
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 4e-27
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 120 5e-27
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 1e-26
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 119 1e-26
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 1e-26
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 1e-26
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 2e-26
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 117 2e-26
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 3e-26
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 4e-26
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 4e-26
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 4e-26
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 4e-26
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 5e-26
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 5e-26
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 5e-26
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 5e-26
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 116 6e-26
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 6e-26
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 6e-26
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 9e-26
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 115 9e-26
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 115 1e-25
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 114 2e-25
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 114 3e-25
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 114 4e-25
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 7e-25
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 8e-25
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 112 8e-25
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 111 2e-24
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 111 2e-24
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 4e-24
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 5e-24
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 6e-24
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 7e-24
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 8e-24
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 9e-24
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 108 2e-23
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 2e-23
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 7e-23
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 9e-23
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 105 1e-22
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 105 1e-22
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 105 1e-22
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 104 2e-22
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 104 2e-22
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 104 3e-22
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 103 5e-22
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 7e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 3e-21
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 100 3e-21
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 8e-21
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 2e-20
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 99 2e-20
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 97 4e-20
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-19
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-19
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-19
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 94 3e-19
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 5e-19
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 5e-19
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 5e-19
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 6e-19
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 6e-19
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 7e-19
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 2e-18
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 92 2e-18
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 91 2e-18
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 91 3e-18
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 91 4e-18
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 4e-18
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 4e-18
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 88 3e-17
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 87 4e-17
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 6e-17
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 84 3e-16
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 9e-16
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 82 2e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 81 3e-15
AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 4e-15
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 7e-15
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 79 9e-15
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-14
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-14
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-14
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 3e-14
AT5G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 3e-14
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 3e-14
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 77 4e-14
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-14
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 6e-14
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 6e-14
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 7e-14
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 76 8e-14
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-13
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-13
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-13
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-13
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 75 2e-13
AT4G35850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 75 2e-13
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 3e-13
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 74 4e-13
AT5G36300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 7e-13
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 73 7e-13
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 1e-12
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 72 1e-12
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 72 2e-12
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 71 3e-12
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 4e-12
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 70 4e-12
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 4e-12
AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |... 70 5e-12
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT1G07590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 8e-12
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 8e-12
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 69 9e-12
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 69 9e-12
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 69 1e-11
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-11
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-11
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-11
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 2e-11
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 68 2e-11
AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 68 3e-11
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT1G01970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 68 3e-11
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 4e-11
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 5e-11
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 6e-11
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 6e-11
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 7e-11
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 7e-11
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 7e-11
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 7e-11
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 8e-11
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 9e-11
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 1e-10
AT2G15820.1 | Symbols: OTP51 | OTP51 (ORGANELLE TRANSCRIPT PROCE... 66 1e-10
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 1e-10
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 1e-10
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 65 1e-10
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 2e-10
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT4G14190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 2e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 3e-10
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 3e-10
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 65 3e-10
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 64 4e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 6e-10
AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 6e-10
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 6e-10
AT2G01860.1 | Symbols: EMB975 | EMB975 (EMBRYO DEFECTIVE 975) | ... 63 8e-10
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 63 9e-10
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 9e-10
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 9e-10
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G28340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G28380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT3G56030.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 2e-09
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 4e-09
AT4G04790.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 4e-09
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT3G02490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 8e-09
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 60 8e-09
AT5G27460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 8e-09
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 2e-08
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 2e-08
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 57 4e-08
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 57 4e-08
AT5G66631.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 4e-08
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-08
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-08
AT3G15590.1 | Symbols: | DNA-binding protein, putative | chr3:5... 57 6e-08
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-08
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 7e-08
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 7e-08
AT1G80270.3 | Symbols: | DNA-binding protein, putative | chr1:3... 56 8e-08
AT1G80270.2 | Symbols: | DNA-binding protein, putative | chr1:3... 56 8e-08
AT1G80270.1 | Symbols: | DNA-binding protein, putative | chr1:3... 56 8e-08
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 56 8e-08
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT5G27300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 8e-08
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT5G27300.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 9e-08
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 56 1e-07
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-07
AT1G03100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-07
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-07
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 1e-07
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 55 2e-07
AT4G21705.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G76280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G68980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-07
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 6e-07
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 6e-07
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT3G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 8e-07
AT3G04260.1 | Symbols: PTAC3 | PTAC3 (PLASTID TRANSCRIPTIONALLY ... 52 1e-06
AT1G69290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G30610.1 | Symbols: emb2279 | emb2279 (embryo defective 2279)... 52 1e-06
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT3G46870.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 52 2e-06
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT1G60770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 4e-06
AT1G15480.1 | Symbols: | DNA binding | chr1:5318307-5320422 FOR... 50 5e-06
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-06
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 7e-06
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-06
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 1305 bits (3376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/845 (74%), Positives = 720/845 (85%), Gaps = 25/845 (2%)
Query: 5 SRLCPRK-LYTLTRNPSSRPPFQAFNSLTSNSNTIVNIDTCFNFNYPIYS-------LC- 55
+++ PR ++TL+R+ S P L S S + F+FN + S C
Sbjct: 7 AKVIPRNVIFTLSRSSISESP------LISPSRINPKLAGSFSFNIRLLSYFTVRNGFCP 60
Query: 56 HSSIPQFFRLLKTPKFAIYSDFCGTNPYFVRNYCSAKNNTGSGSSQWTEDIQYLDESGGV 115
S+P + P F + C + VR +CS K + S SS WTE+++YLDESG V
Sbjct: 61 DCSVP------RDPNFVGLTTQCRS---IVRRFCSEKIGS-SESSGWTEEVEYLDESGSV 110
Query: 116 IYSGKGIRSVEPGVDDHVMVGGLKKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLP 175
++SGKGIRSVEPG+DDHVMVGGLKKP+MN ++VAKIVEVV+RWKWGPELET LDKLQF+P
Sbjct: 111 LHSGKGIRSVEPGLDDHVMVGGLKKPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVP 170
Query: 176 NMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDE 235
NM HI Q+LKIV ++DA+LSL++WAK+Q WY+P++ECY++LFD LNQ RDF IQSLF+E
Sbjct: 171 NMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEE 230
Query: 236 MVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLN 295
MVQDSS G SF+AYN+VIQYLAKAEKLE+AFCCFKK Q SG K+DTQTYN L+ LFLN
Sbjct: 231 MVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLN 290
Query: 296 KGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI 355
KGLPYK+FEIYESME LD STYEL+IPSLAKSGRLD AFKLFQ+MKER +RPSF +
Sbjct: 291 KGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSV 350
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
FSSLVDSMGKAGRLDT+MK+YMEM+GFG RPSATM+ SLI+SY KAGKLDTALRLWDEMK
Sbjct: 351 FSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMK 410
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
K+GFRPN+GLYT+I+ES+AKSGKL+ AM++F DMEKAGFLPTPSTYSCLLEMHA SGQVD
Sbjct: 411 KSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVD 470
Query: 476 SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
SAMK+YNSMTNAGLRPG+S+Y ++LTLLA+K+LVDVA KILLEMKAMG+SVDV ASDVLM
Sbjct: 471 SAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
Query: 536 VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKV 595
+YIKD SVDLAL+WLRFM SSGI+TNNFIIRQLFESCMKNGLY+SA+PLLET V+SA KV
Sbjct: 531 IYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKV 590
Query: 596 DLVLYTSILAHLVRCQEEQNERHLMLILGATRHKAHKFMCGLFTGPEQRKQPVLSFVREF 655
DLVLYTSILAHLVRCQ+E ER LM IL AT+HKAH FMCGLFTGPEQRKQPVL+FVREF
Sbjct: 591 DLVLYTSILAHLVRCQDEDKERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREF 650
Query: 656 FQGIDYELEEGAARXXXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSL 715
+QGIDYELEEGAAR MGQINRARCVWKVAYENKLFPKAIVFDQHIAWSL
Sbjct: 651 YQGIDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSL 710
Query: 716 DVRNLSVGAALIAVVHTLHRFRKRMLYYGVIPRRIKLVTGPTLKIVVAQMLSSVESPFEV 775
DVRNLSVGAALIAVVHTLHRFRKRMLYYGV+PRRIKLVTGPTLKIV+AQMLSSVESPFEV
Sbjct: 711 DVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESPFEV 770
Query: 776 SKVVLRAPGDSVMEWFKKPIVQQFLLNEIPSRADILMHKLNTLFPSSAPEIRSLSPPKPL 835
SKVVLRAPG+ VMEWFKKPIVQQFLLNEIPSR+DILMHK+N +FPSSAPE+RS+SPPKPL
Sbjct: 771 SKVVLRAPGELVMEWFKKPIVQQFLLNEIPSRSDILMHKMNVMFPSSAPELRSMSPPKPL 830
Query: 836 ISKKA 840
+S KA
Sbjct: 831 MSSKA 835
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 222/469 (47%), Gaps = 15/469 (3%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D TY M+ +L ++ + KL EM +P+ ++ L+ S G+A L+ AM ++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+M+ G +P Y +LI+ + KAG LD A+ ++ M+ G P+ Y++I+ K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
G L A +F +M G P TY+ ++++HA + +A+KLY M NAG P TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDS 555
+ ++ +L ++ A + EM+ + D +L+ ++ K G+V+ A +W + M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 556 SGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQN 615
+G+R N L + ++ A LL+ + + L YT +L+ + + +
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Query: 616 ERHLMLILGATRHKAHKFMCGL-FTGPEQRKQPVLSFVREFFQGIDYELEEGAARXXXXX 674
++ +T H AH F+ + GP+ + V + F + E E + R
Sbjct: 663 MGFCGQLMASTGHPAHMFLLKMPAAGPD--GENVRNHANNFLDLMHSEDRE-SKRGLVDA 719
Query: 675 XXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLH 734
GQ A VW+VA + +FP A+ W +++ +S G A+ A+ TL
Sbjct: 720 VVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLA 779
Query: 735 RFRKRMLYYGVIPRRIKLVTG----------PTLKIVVAQMLSSVESPF 773
FRK+ML G P RI +VTG ++ V ++L+ SPF
Sbjct: 780 WFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPF 828
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 198/420 (47%), Gaps = 39/420 (9%)
Query: 148 VAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYV 207
V + V++R++WGP E L L + Q LK +ND +L + W KRQ +
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
+ Y + L +++ F AI L DEMV+D
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD---------------------------- 393
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
G + +T TYN LI + ++ ++ M+ A C D TY +I
Sbjct: 394 ----------GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
AK+G LD+A ++Q M+ + P +S +++ +GKAG L A K++ EM G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y +++ + KA AL+L+ +M+ AGF P+ Y++++E G L+ A ++F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+M++ ++P Y L+++ +G V+ A + Y +M +AGLRP + T ++L+
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWL-RFMDSSGIRTNNFIIR 566
+ A ++L M A+G + +L+ DG L + + + M S+G + F+++
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLK 683
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 222/469 (47%), Gaps = 15/469 (3%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D TY M+ +L ++ + KL EM +P+ ++ L+ S G+A L+ AM ++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+M+ G +P Y +LI+ + KAG LD A+ ++ M+ G P+ Y++I+ K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
G L A +F +M G P TY+ ++++HA + +A+KLY M NAG P TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDS 555
+ ++ +L ++ A + EM+ + D +L+ ++ K G+V+ A +W + M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 556 SGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQN 615
+G+R N L + ++ A LL+ + + L YT +L+ + + +
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Query: 616 ERHLMLILGATRHKAHKFMCGL-FTGPEQRKQPVLSFVREFFQGIDYELEEGAARXXXXX 674
++ +T H AH F+ + GP+ + V + F + E E + R
Sbjct: 663 MGFCGQLMASTGHPAHMFLLKMPAAGPD--GENVRNHANNFLDLMHSEDRE-SKRGLVDA 719
Query: 675 XXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLH 734
GQ A VW+VA + +FP A+ W +++ +S G A+ A+ TL
Sbjct: 720 VVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLA 779
Query: 735 RFRKRMLYYGVIPRRIKLVTG----------PTLKIVVAQMLSSVESPF 773
FRK+ML G P RI +VTG ++ V ++L+ SPF
Sbjct: 780 WFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPF 828
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 198/420 (47%), Gaps = 39/420 (9%)
Query: 148 VAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYV 207
V + V++R++WGP E L L + Q LK +ND +L + W KRQ +
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
+ Y + L +++ F AI L DEMV+D
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD---------------------------- 393
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
G + +T TYN LI + ++ ++ M+ A C D TY +I
Sbjct: 394 ----------GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
AK+G LD+A ++Q M+ + P +S +++ +GKAG L A K++ EM G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y +++ + KA AL+L+ +M+ AGF P+ Y++++E G L+ A ++F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+M++ ++P Y L+++ +G V+ A + Y +M +AGLRP + T ++L+
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWL-RFMDSSGIRTNNFIIR 566
+ A ++L M A+G + +L+ DG L + + + M S+G + F+++
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLK 683
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 212/441 (48%), Gaps = 5/441 (1%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D TY M+ +L ++ + KL EM +P+ ++ L+ S G+A L AM ++
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+M+ G P Y +LI+ + KAG LD A+ ++ M++AG P+ Y++I+ K+
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
G L A +F +M G P T++ ++ +HA + ++A+KLY M NAG +P TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDS 555
+ ++ +L ++ A + EM+ + D +L+ ++ K G+VD A +W + M
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 556 SGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQN 615
+G+R N L + ++ A LL++ + L YT +L+ + +
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFD 657
Query: 616 ERHLMLILGATRHKAHKFMCGL-FTGPEQRKQPVLSFVREFFQGIDYELEEGAARXXXXX 674
++ + H AH F+ + GP+ +K V V F + E E + R
Sbjct: 658 MGFCGQLMAVSGHPAHMFLLKMPPAGPDGQK--VRDHVSNFLDFMHSEDRE-SKRGLMDA 714
Query: 675 XXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLH 734
G A VW+VA ++P A+ + W +++ +S G A+IA+ TL
Sbjct: 715 VVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRTLA 774
Query: 735 RFRKRMLYYGVIPRRIKLVTG 755
FRK+ML G P RI +VTG
Sbjct: 775 WFRKQMLVSGDCPSRIDIVTG 795
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 207/447 (46%), Gaps = 18/447 (4%)
Query: 148 VAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYV 207
V + +++R+KWG E L F + Q LK +++ +L + W KRQ +
Sbjct: 297 VENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFK 356
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
+ Y + L +++ F I L DEMV+D K + YNR+I +A L+ A
Sbjct: 357 HDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVT---YNRLIHSYGRANYLKEA 413
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F ++Q +G + D TY LI + G + ++Y+ M+ A S D+ TY ++I
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L K+G L A +LF EM + P+ F+ ++ KA +TA+K+Y +M+ G +P
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y+ ++E G L+ A ++ EM++ + P+ +Y L+V+ K+G +D A +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M +AG P T + LL ++ A L SM GL P + TYT +L+
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTD-- 651
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMVYIK------DGSV--DLALRWLRFMDSSGIR 559
A+ +M G + VS M +K DG D +L FM S
Sbjct: 652 -----ARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRE 706
Query: 560 TNNFIIRQLFESCMKNGLYESAKPLLE 586
+ ++ + + K+GL E A + E
Sbjct: 707 SKRGLMDAVVDFLHKSGLKEEAGSVWE 733
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 133/563 (23%), Positives = 246/563 (43%), Gaps = 50/563 (8%)
Query: 139 KKPFM---NVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLS 195
+KP+ N V I V++ WGP E L L F P ++ L+ + D++ ++
Sbjct: 24 EKPYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIE 83
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMV------------------ 237
++W +R++ E Y L + + R+FDA+ + EM
Sbjct: 84 YFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGC 143
Query: 238 --QDSSKDGIS------------SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
+ ++G +F AY +I + ++ F+++Q G +
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
+ LI F +G + + + M+++ D Y + I S K G++D+A+K F E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
++ ++P ++S++ + KA RLD A++++ + P Y ++I Y AGK
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
D A L + + G P+ Y I+ K GK+D A+ +F +M+K P STY+
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNI 382
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
L++M +G++D+A +L +SM AGL P + T ++ L + +D A + EM
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 524 FSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAK 582
+ D ++ ++ K G VD A + M S RTN+ + L ++ +G E
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 583 PLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLILGATRHKAHKFMCGLFTGPE 642
+ + +N DL L + + + + E + R + KA +F+ P+
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF-----EEIKARRFV------PD 551
Query: 643 QRKQPVL--SFVREFFQGIDYEL 663
R +L ++ F YEL
Sbjct: 552 ARSYSILIHGLIKAGFANETYEL 574
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 172/368 (46%), Gaps = 5/368 (1%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
L+ + N R D + D + Q+ S D N + + KA + E F+++
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPD----LQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
+ D ++Y+ LI + G +++E++ SM+ C LD+ Y ++I K G++
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
+ A++L +EMK + P+ + S++D + K RLD A ++ E + + + +Y+SL
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I+ + K G++D A + +E+ + G PN + ++++ K+ +++ A+ F M++
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
P TY L+ + + A + M G++P +YT +++ LA + A
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 515 ILLEMKAMGFSVDVSASDVLMVYIKDGSVDL-ALRWLRFMDSSGIRTNNFIIRQLFESCM 573
+ KA G D + + ++ + +G+ + A G+ +N L ++
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLH 843
Query: 574 KNGLYESA 581
KN E A
Sbjct: 844 KNDCLEQA 851
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 202/447 (45%), Gaps = 9/447 (2%)
Query: 132 HVMVGGLKKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNM---THILQALKIVN 188
+ GLK + T++ ++ R E+ HL+K + +P ++
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 189 DIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSF 248
D + SL + +R +P+ Y + L + D +F+EM KD +
Sbjct: 323 KFDEAYSLLE-RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM----KKDAAPNL 377
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
YN +I L +A KL+ AF +Q +G + +T N ++ ++ ++E
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M+ C+ D T+ +I L K GR+D A+K++++M + + R + +++SL+ + GR
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
+ KIY +M P + + ++ KAG+ + +++E+K F P+ Y++
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++ K+G + +F M++ G + Y+ +++ G+V+ A +L M G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLAL 547
P + TY +++ LA +D A + E K+ ++V S ++ + K G +D A
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMK 574
L + G+ N + L ++ +K
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVK 704
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 190/438 (43%), Gaps = 10/438 (2%)
Query: 175 PNMTH---ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQS 231
PN++ ++ L +D + L ++ + PN ++ D L +S+ D +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF-PNVRTVNIMVDRLCKSQKLDEACA 433
Query: 232 LFDEM-VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALI 290
+F+EM + + D I+ + +I L K +++ A+ ++K+ S + ++ Y +LI
Sbjct: 434 MFEEMDYKVCTPDEIT----FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 291 TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
F N G +IY+ M CS D + + K+G + +F+E+K R
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
P +S L+ + KAG + +++ M+ G Y +I+ + K GK++ A +L
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
+EMK GF P Y +++ AK +LD A +F + + YS L++
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
G++D A + + GL P + T+ ++L L + ++ A MK + + +
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 531 SDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYV 589
+L+ + K + A + + M G++ + + K G A L + +
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 590 NSAAKVDLVLYTSILAHL 607
+ D Y +++ L
Sbjct: 790 ANGGVPDSACYNAMIEGL 807
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 35/309 (11%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+Y+ +I L KA + F ++ G +DT+ YN +I F G K++++ E M
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ TY +I LAK RLD A+ LF+E K + I + I+SSL+D GK GR+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALR-------------------- 409
D A I E+ GL P+ + SL+++ KA +++ AL
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 410 ---------------LWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
W EM+K G +P+ YT ++ AK+G + A ++F+ + G
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
+P + Y+ ++E + + A L+ GL T +L L ++ AA
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAI 853
Query: 515 ILLEMKAMG 523
+ ++ G
Sbjct: 854 VGAVLRETG 862
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 223/498 (44%), Gaps = 40/498 (8%)
Query: 150 KIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPN 209
+ + +VK +KWGP+ E L+ L+ + + L+I +I+ + +KWA ++ + +
Sbjct: 66 RFIRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHD 125
Query: 210 EECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFC 269
Y+ L L ++R + + E+V+++ S + +++ L +A+ + A
Sbjct: 126 CSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVS--VSPAVLSELVKALGRAKMVSKALS 183
Query: 270 CFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM-EAAQCSLDSSTYELMIPSL 328
F + +G K + TYN++I + + +G K E+Y M C D+ TY +I S
Sbjct: 184 VFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSY 243
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
K GR D A +LF EMK+ ++P+ I+++L+ K G+++ A+ ++ EM+ G P+
Sbjct: 244 EKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTV 303
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
Y LI+ KAG++D A + +M + G P+ ++ K G+++ ++F++
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSE 363
Query: 449 MEKAGFLPT----------------------------------PS--TYSCLLEMHAASG 472
M PT PS TYS L++ + +
Sbjct: 364 MGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423
Query: 473 QVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASD 532
+V+ A+ L M G P + Y +++ L K + A ++ E+K +V
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 533 VLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNS 591
V++ + K G + A+ M + G + + L +K G+ A LL +
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 592 AAKVDLVLYTSILAHLVR 609
+ D+ + IL R
Sbjct: 544 GCRADINSHNIILNGFAR 561
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/477 (19%), Positives = 211/477 (44%), Gaps = 40/477 (8%)
Query: 177 MTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEM 236
++ +++AL + +LS++ AK + P Y + L Q + + ++ EM
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGRKCK-PTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 237 VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNK 296
+ D Y+ +I K + + A F +++ + + + Y L+ ++
Sbjct: 224 CNEG--DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 297 GLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIF 356
G K+ +++E M+ A CS TY +I L K+GR+D A+ +++M + P
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFL 341
Query: 357 SSLVDSMGKAGRLDTAMKIYMEM------------------------------------R 380
++L++ +GK GR++ ++ EM +
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 381 GFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLD 440
+ PS Y+ LI+ Y K +++ AL L +EM + GF P Y ++ + K+ + +
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 441 TAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL 500
A +F ++++ + Y+ +++ G++ A+ L+N M N G P + Y A++
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Query: 501 TLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIR 559
+ + +++ A +L +M+ G D+++ ++++ + + G A+ + SGI+
Sbjct: 522 SGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK 581
Query: 560 TNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNE 616
+ L G++E A ++ + + D + Y+SIL + E+++
Sbjct: 582 PDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDD 638
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 200/431 (46%), Gaps = 12/431 (2%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLL--FDALNQSRDFDAIQSLFDEMVQDSSKDGISS 247
++ ++ + KR + C LL F L ++ D ++ F +M+ ++ + +
Sbjct: 76 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT---DDVKRFFKDMIGAGARPTVFT 132
Query: 248 FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYE 307
YN +I + K +E A F++++ G DT TYN++I F G + +E
Sbjct: 133 ---YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189
Query: 308 SMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
M+ C D TY +I K G+L + + ++EMK ++P+ +S+LVD+ K G
Sbjct: 190 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 249
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
+ A+K Y++MR GL P+ Y SLI++ K G L A RL +EM + G N YT
Sbjct: 250 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 309
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
+++ + ++ A +F M+ AG +P ++Y+ L+ + +D A++L N +
Sbjct: 310 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 369
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLA 546
G++P + Y + L S + ++ A ++ EMK G + LM Y K G+
Sbjct: 370 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 429
Query: 547 LRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNS-AAKVDLVLYTSILA 605
L L M I L + KN L A N + + ++T+++
Sbjct: 430 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 489
Query: 606 HLVRCQEEQNE 616
L C++ Q E
Sbjct: 490 GL--CKDNQVE 498
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 169/361 (46%), Gaps = 1/361 (0%)
Query: 245 ISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE 304
+ F ++ + L LE A CF K++ T++ N L+ F G
Sbjct: 57 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 116
Query: 305 IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMG 364
++ M A TY +MI + K G ++ A LF+EMK R + P ++S++D G
Sbjct: 117 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 176
Query: 365 KAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
K GRLD + + EM+ P Y +LI + K GKL L + EMK G +PN
Sbjct: 177 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 236
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
Y+ +V++ K G + A+ + DM + G +P TY+ L++ + G + A +L N M
Sbjct: 237 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296
Query: 485 TNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSV 543
G+ + TYTA++ L + + A ++ +M G ++++ + L+ ++K ++
Sbjct: 297 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 356
Query: 544 DLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSI 603
D AL L + GI+ + + E+AK ++ K + ++YT++
Sbjct: 357 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 416
Query: 604 L 604
+
Sbjct: 417 M 417
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 127/292 (43%), Gaps = 1/292 (0%)
Query: 319 STYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
++ + L G L+ A + F +MK + P + L+ K G+ D + + +
Sbjct: 61 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
M G G RP+ Y +I+ K G ++ A L++EMK G P+ Y +++ K G+
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
LD + F +M+ P TY+ L+ G++ ++ Y M GL+P + +Y+
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGF-SVDVSASDVLMVYIKDGSVDLALRWLRFMDSSG 557
++ + ++ A K ++M+ +G + + + ++ K G++ A R M G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 558 IRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ N L + + A+ L + +L Y +++ V+
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 4/275 (1%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
+PN Y L ++++ D L +E+ K + Y I L EK+E
Sbjct: 337 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL---LYGTFIWGLCSLEKIEA 393
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A +++ G K ++ Y L+ + G P + + + M+ + T+ ++I
Sbjct: 394 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 453
Query: 327 SLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L K+ + A F + + ++ + IF++++D + K +++ A ++ +M GL
Sbjct: 454 GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 513
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P T Y SL++ K G + AL L D+M + G + + YT +V + +L A S
Sbjct: 514 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 573
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
+M G P +L+ H G +D A++L
Sbjct: 574 LEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 4/304 (1%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y L D L + + LF +M + I + +YN +I KA+ ++ A
Sbjct: 308 YTALIDGLCDAERMKEAEELFGKM---DTAGVIPNLASYNALIHGFVKAKNMDRALELLN 364
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
+++G G K D Y I + + + M+ +S Y ++ + KSG
Sbjct: 365 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 424
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG-FGLRPSATMY 391
L EMKE +I + F L+D + K + A+ + + FGL+ +A ++
Sbjct: 425 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 484
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
++I+ K +++ A L+++M + G P+ YT +++ N K G + A+++ + M +
Sbjct: 485 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 544
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
G Y+ L+ + Q+ A M G+ P ++L +D
Sbjct: 545 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDE 604
Query: 512 AAKI 515
A ++
Sbjct: 605 AVEL 608
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/597 (23%), Positives = 262/597 (43%), Gaps = 65/597 (10%)
Query: 251 YNRVIQYLAKAE-KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
YN VI K + + F ++Q +G + D T+N+L+ + GL + +++ M
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ D +Y ++ ++ K G++D+AF++ +M + I P+ +S+++D KAGR
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRF 425
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
D A+ ++ EMR G+ Y +L+ YTK G+ + AL + EM G + + Y +
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ K GK D +F +M++ LP TYS L++ ++ G AM+++ +AGL
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALR 548
R + Y+A++ L LV A ++ EM G S + V+ + ++ + + ++D +
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Query: 549 W-----LRFMD---SSGIRTNNFIIRQLFESCMKNGLYESAKP----------LLETYVN 590
+ L F S+ T + QLF + K +LE +
Sbjct: 606 YSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRK 665
Query: 591 SAA---KVDLVLYTSILAHLVRCQEEQNERHLMLILGATRHKAHKFMCGLFTGPEQRKQP 647
K ++V +++IL RC ++ L+ L +K + + GL G QR+
Sbjct: 666 MHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMG--QRENV 723
Query: 648 VLSFVREFFQGIDYELEEGAARXXXXXXXXXXXXMGQI---------NRARCVWKVAYEN 698
L + F ++ E++ A GQ R+R VW+ + +
Sbjct: 724 WLQ-AQSLFDKVN-EMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSD 781
Query: 699 KLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYG-VIPRRIKLVTG-- 755
LD+ +S GAA A+VH + ++Y G +P+ + ++TG
Sbjct: 782 SC--------------LDLHLMSSGAAR-AMVHAWLLNIRSIVYEGHELPKVLSILTGWG 826
Query: 756 --------PTLKIVVAQMLSSVESPFEVSKVVL---RAPGDSVMEWFKKPIVQQFLL 801
L+ V +L +++PF +SK + + G V W ++ + L+
Sbjct: 827 KHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLI 883
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 163/358 (45%), Gaps = 2/358 (0%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
+I L + K+ +A F+ G ++ALI+ + GL ++ ++ SM+
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 314 CSLDSSTYELMIPSLAKSG-RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTA 372
+ TY +I + K G K F EM+ ++P F+SL+ + G + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 373 MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
++ EM + Y +L+++ K G++D A + +M PN Y+ +++
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
AK+G+ D A+++F +M G +Y+ LL ++ G+ + A+ + M + G++
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 493 MSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLR 551
+ TY A+L + D K+ EMK ++ + S ++ Y K G A+ R
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 552 FMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
S+G+R + + L ++ KNGL SA L++ ++V Y SI+ R
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 152/329 (46%), Gaps = 24/329 (7%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y L DA+ + D F+ + Q K + + +Y+ VI AKA + + A F
Sbjct: 377 YNTLLDAICKGGQMDLA---FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
+++ G +D +YN L++++ G ++ +I M + D TY ++ K G
Sbjct: 434 EMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+ D K+F EMK ++ P+ +S+L+D K G AM+I+ E + GLR +Y+
Sbjct: 494 KYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYS 553
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLD------------ 440
+LI++ K G + +A+ L DEM K G PN Y I+++ +S +D
Sbjct: 554 ALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLP 613
Query: 441 ---TAMSIFNDMEKA------GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
+A+S + E G L T S + ++ ++++ M ++P
Sbjct: 614 FSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKP 673
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMK 520
+ T++AIL + + A+ +L E++
Sbjct: 674 NVVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 177/400 (44%), Gaps = 13/400 (3%)
Query: 218 DALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK----- 272
DAL + DF +F ++ S + + D +I+ L + + A ++
Sbjct: 167 DALQNAIDFSGDDEMFHSLML-SFESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKR 225
Query: 273 -KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
+ + GK+ + A+I+ G + I+E+ A + +I + +S
Sbjct: 226 ERRKNEQGKLAS----AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRS 281
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG-RLDTAMKIYMEMRGFGLRPSATM 390
G + A +F MKE +RP+ +++++D+ GK G K + EM+ G++P
Sbjct: 282 GLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRIT 341
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
+ SL+ ++ G + A L+DEM + Y ++++ K G++D A I M
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
+P +YS +++ A +G+ D A+ L+ M G+ +Y +L++ +
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 511 VAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLF 569
A IL EM ++G DV + L+ Y K G D + M + N L
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 570 ESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ K GLY+ A + + ++ + D+VLY++++ L +
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 197/460 (42%), Gaps = 26/460 (5%)
Query: 155 VKRWKWGPELETHLDKLQFLPNMTHILQALKIV-------------------NDIDASLS 195
V++ K+ ++E+ ++KL LP I + L I D SL
Sbjct: 67 VEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLR 126
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRV 254
L+K+ +RQ W PNE Y ++ L + D +FDEM G+S S +Y +
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM----PSQGVSRSVFSYTAL 182
Query: 255 IQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSF-EIYESMEAAQ 313
I + + E + +++ TYN +I GL ++ ++ M
Sbjct: 183 INAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
D TY ++ + A G D A +F+ M + I P +S LV++ GK RL+
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
+ EM G P T Y L+E+Y K+G + A+ ++ +M+ AG PN Y++++
Sbjct: 303 DLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
+SG+ D +F +M+ + P +TY+ L+E+ G + L++ M + P M
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 494 STYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRF 552
TY I+ L + A KIL M A A + V+ + + + AL
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482
Query: 553 MDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSA 592
M G + L S + GL + ++ +L V+S
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 149/315 (47%), Gaps = 3/315 (0%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
VP+ Y L + + R + + L EM S I+S YN +++ AK+ ++
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS---YNVLLEAYAKSGSIKE 335
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A F ++Q +G + TY+ L+ LF G +++ M+++ D++TY ++I
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+ G LF +M E NI P + ++ + GK G + A KI M + P
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
S+ Y +IE++ +A + AL ++ M + G P+ + ++ S A+ G + + +I
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
+ + +G T++ +E + G+ + A+K Y M + P T A+L++ +
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 507 KLVDVAAKILLEMKA 521
+LVD + EMKA
Sbjct: 576 RLVDECREQFEEMKA 590
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 155/330 (46%), Gaps = 8/330 (2%)
Query: 281 VDTQTYNALITLFLNK--GLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAF 338
V+ Y+ + +NK LP + I ++ + L + + L+ A G +
Sbjct: 67 VEKGKYSYDVESLINKLSSLPPRG-SIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSL 125
Query: 339 KLFQEMKERNI--RPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
+LF+ M +R I +P+ I++ ++ +G+ G LD ++++ EM G+ S Y +LI
Sbjct: 126 RLFKYM-QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG-KLDTAMSIFNDMEKAGFL 455
+Y + G+ +T+L L D MK P+ Y ++ + A+ G + + +F +M G
Sbjct: 185 AYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
P TY+ LL A G D A ++ +M + G+ P ++TY+ ++ + ++ +
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 516 LLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMK 574
L EM + G D+++ +VL+ Y K GS+ A+ M ++G N L +
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 575 NGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+G Y+ + L +S D Y ++
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 205/482 (42%), Gaps = 56/482 (11%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
L L + R F LF++MV + + Y VI+ L + + L A ++
Sbjct: 198 LLHGLVKFRHFGLAMELFNDMVSVGIRPDVY---IYTGVIRSLCELKDLSRAKEMIAHME 254
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
+G V+ YN LI K +++ I + + D TY ++ L K +
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFE 314
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
+ ++ EM PS SSLV+ + K G+++ A+ + + FG+ P+ +Y +LI
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI---------- 445
+S K K A L+D M K G RPN Y+++++ + GKLDTA+S
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 446 ---------------FNDMEKA-GFL---------PTPSTYSCLLEMHAASGQVDSAMKL 480
F D+ A GF+ PT TY+ L+ + + G+++ A++L
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 481 YNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIK 539
Y+ MT G+ P + T+T +L+ L L+ A K+ EM + +V++ Y +
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 540 DGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVL 599
+G + A +L+ M GI + + R L G AK ++ +++ +
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 600 YTSILAHLVR----------CQEEQNER-------HLMLILGATRHKAHKFMCGLFTGPE 642
YT +L R CQE + +LI G+ +HK K GL
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 643 QR 644
R
Sbjct: 675 DR 676
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 158/365 (43%), Gaps = 9/365 (2%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
YN +I L K K A F ++ G + + TY+ LI +F +G + M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
L Y +I K G + A EM + + P+ ++SL+ G++
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ A+++Y EM G G+ PS + +L+ +AG + A++L++EM + +PN Y ++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+E + G + A +M + G +P +Y L+ +GQ A + +
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRW 549
YT +L + ++ A + EM G +D+ VL+ DGS+ R
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI----DGSLKHKDRK 664
Query: 550 LRF-----MDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
L F M G++ ++ I + ++ K G ++ A + + +N + V YT+++
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 605 AHLVR 609
L +
Sbjct: 725 NGLCK 729
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 158/361 (43%), Gaps = 9/361 (2%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
DA++ LF+EM + + K + YN +I+ + + AF K++ G DT +Y
Sbjct: 525 DAVK-LFNEMAEWNVKPNRVT---YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
LI G ++ + + C L+ Y ++ + G+L+ A + QEM +
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
R + + L+D K + EM GL+P +Y S+I++ +K G
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
A +WD M G PN YT ++ K+G ++ A + + M+ +P TY C L+
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 467 MHAASGQVD--SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ G+VD A++L+N++ GL +TY ++ + ++ A++++ M G
Sbjct: 761 I-LTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 525 SVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKP 583
S D ++ + ++ + V A+ M GIR + L C G A
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 584 L 584
L
Sbjct: 879 L 879
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 11/291 (3%)
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELA 267
NE CY L + + S+ EMVQ G+ Y +I K + +L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQR----GVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F K++ G K D Y ++I G ++F I++ M C + TY +I
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF---GL 384
L K+G ++ A L +M+ + P+ + +D + K G +D M+ +E+ GL
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVD--MQKAVELHNAILKGL 783
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
+ Y LI + + G+++ A L M G P+ YT ++ + + A+
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
++N M + G P Y+ L+ +G++ A +L N M GL P T
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 1/242 (0%)
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
LD + M + L P ++L+ K A+ L+++M G RP+ +YT
Sbjct: 173 LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 232
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++ S + L A + ME G Y+ L++ +V A+ + +
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS-VDVSASDVLMVYIKDGSVDLAL 547
L+P + TY ++ L + ++ +++ EM + FS + + S ++ K G ++ AL
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
++ + G+ N F+ L +S K + A+ L + + + V Y+ ++
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 608 VR 609
R
Sbjct: 413 CR 414
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 208/445 (46%), Gaps = 19/445 (4%)
Query: 153 EVVKRWK---WGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPN 209
E++KR GP++ T+ T ++ AL +D + +++ K + P+
Sbjct: 279 EILKRMDDEGCGPDVVTY----------TVLIDALCTARKLDCAKEVFEKMK-TGRHKPD 327
Query: 210 EECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFC 269
Y+ L D + +RD D+++ + EM +D + +F ++ L KA AF
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI---LVDALCKAGNFGEAFD 384
Query: 270 CFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLA 329
++ G + TYN LI L + E++ +ME+ + TY + I
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 330 KSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
KSG A + F++MK + I P+ ++ + S+ KAGR A +I+ ++ GL P +
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
Y +++ Y+K G++D A++L EM + G P+ + ++ + K+ ++D A +F M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
++ PT TY+ LL +G++ A++L+ M G P T+ + L V
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 510 DVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQL 568
+A K+L +M MG DV + + ++ +K+G V A+ + M + + + L
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTL 683
Query: 569 FESCMKNGLYESAKPLLETYVNSAA 593
+K L E A ++ ++ + A
Sbjct: 684 LPGVVKASLIEDAYKIITNFLYNCA 708
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 161/315 (51%), Gaps = 5/315 (1%)
Query: 188 NDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISS 247
N++ + +L++ + P Y LL L ++ D I+ D +Q S I
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA---DMIEIAQDVFLQVKSTGCIPD 819
Query: 248 FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY- 306
YN ++ K+ K++ F +K++ + +T T+N +I+ + G + ++Y
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
+ M S + TY +I L+KSGRL A +LF+ M + RP+ I++ L++ GKA
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
G D A ++ M G+RP Y+ L++ G++D L + E+K++G P+ Y
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKA-GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
LI+ KS +L+ A+ +FN+M+ + G P TY+ L+ +G V+ A K+YN +
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 486 NAGLRPGMSTYTAIL 500
AGL P + T+ A++
Sbjct: 1060 RAGLEPNVFTFNALI 1074
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 188/440 (42%), Gaps = 39/440 (8%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
+ P+ + Y L L + RD D++ L EM K + +F RV L +A K+
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV---LGRAGKIN 275
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY---- 321
A+ K++ G D TY LI + E++E M+ + D TY
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 322 -------------------------------ELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
+++ +L K+G AF M+++ I
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
P+ +++L+ + + RLD A++++ M G++P+A Y I+ Y K+G +AL
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
+++MK G PN + S AK+G+ A IF ++ G +P TY+ +++ ++
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
G++D A+KL + M G P + +++ L VD A K+ + MK M V
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 531 SDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYV 589
+ L+ + K+G + A+ M G N LF+ KN A +L +
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 590 NSAAKVDLVLYTSILAHLVR 609
+ D+ Y +I+ LV+
Sbjct: 636 DMGCVPDVFTYNTIIFGLVK 655
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 178/407 (43%), Gaps = 4/407 (0%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
R+ +V N Y L L +SR ++ M+ + + S Y+ ++ L K
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR---PSLQTYSSLMVGLGKR 236
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
++ K+++ G K + T+ I + G +++EI + M+ C D TY
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
++I +L + +LD A ++F++MK +P + +L+D LD+ + + EM
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
G P + L+++ KAG A D M+ G PN Y ++ + +LD
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
A+ +F +ME G PT TY ++ + SG SA++ + M G+ P + A L
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 502 LLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRT 560
LA A +I +K +G D +++M Y K G +D A++ L M +G
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 561 NNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
+ ++ L + K + A + K +V Y ++LA L
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 180/415 (43%), Gaps = 8/415 (1%)
Query: 174 LPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLF 233
L + + + LK D D+S S +K V E + +AL + + +F
Sbjct: 82 LSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVF 141
Query: 234 DEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
D M + K + Y + + L+ L+ A +K++ G ++ +YN LI L
Sbjct: 142 DLMQKRIIK---RDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLL 198
Query: 294 LNKGLPYKSFEIYESM--EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP 351
L ++ E+Y M E + SL TY ++ L K +D L +EM+ ++P
Sbjct: 199 LKSRFCTEAMEVYRRMILEGFRPSL--QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKP 256
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
+ F+ + +G+AG+++ A +I M G P Y LI++ A KLD A ++
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
++MK +P+ Y +++ + + LD+ +++MEK G +P T++ L++ +
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSAS 531
G A + M + G+ P + TY ++ L +D A ++ M+++G
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 532 DVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
V + Y K G AL M + GI N S K G AK +
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 12/281 (4%)
Query: 149 AKIVEVVKRWKWGPELETHLDKLQFLPNMTH--ILQALKIVNDIDASLSLYKWAKRQSWY 206
KI E+ + +K E+ TH + +TH ++ L ++D +L LY +
Sbjct: 834 GKIDELFELYK---EMSTHECEAN---TITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
P Y L D L++S + LF+ M+ + + YN +I KA + +
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA---IYNILINGFGKAGEADA 944
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A FK++ G + D +TY+ L+ G + ++ ++ + + D Y L+I
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 327 SLAKSGRLDVAFKLFQEMK-ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L KS RL+ A LF EMK R I P ++SL+ ++G AG ++ A KIY E++ GL
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
P+ + +LI Y+ +GK + A ++ M GF PN G Y
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 1/217 (0%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
TY L+I L ++ +++A +F ++K P ++ L+D+ GK+G++D ++Y EM
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLW-DEMKKAGFRPNYGLYTLIVESNAKSGK 438
+ + +I KAG +D AL L+ D M F P Y +++ +KSG+
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
L A +F M G P + Y+ L+ +G+ D+A L+ M G+RP + TY+
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
++ L VD E+K G + DV ++++
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 173/415 (41%), Gaps = 22/415 (5%)
Query: 188 NDIDASLSLYKWAK-------RQSWY-------VPNEECYLLLFDALNQSRDFDAIQSLF 233
N + + SLY AK +Q +Y VP+ Y ++ ++ + D L
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 526
Query: 234 DEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
EM+++ + + N +I L KA++++ A+ F +++ K TYN L+
Sbjct: 527 SEMMENGCEPDVI---VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 294 LNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSF 353
G ++ E++E M C ++ T+ + L K+ + +A K+ +M + P
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 354 GIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDE 413
+++++ + K G++ AM + +M+ + P +L+ KA ++ A ++
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITN 702
Query: 414 -MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL-PTPSTYSCLLEMHAAS 471
+ +P + ++ S +D A+S + G S ++
Sbjct: 703 FLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKH 762
Query: 472 GQVDSAMKLYNSMT-NAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
V A L+ T + G++P + TY ++ L ++++A + L++K+ G DV+
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 531 SDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
+ L+ Y K G +D + M + N + +K G + A L
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 187/436 (42%), Gaps = 37/436 (8%)
Query: 214 LLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKK 273
L L + FD FD ++ + +I L K ++ A F
Sbjct: 139 LAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNG 198
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQC------------------- 314
+Q G +D +Y +LI+ F N G ++ +++ ME C
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 315 -----------------SLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS 357
+ D+ TY +I + A ++F+EMK ++
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 358 SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA 417
+L+D GK+ R AMK+ EM G PS Y SLI +Y + G LD A+ L ++M +
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 418 GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSA 477
G +P+ YT ++ ++GK+++AMSIF +M AG P T++ ++M+ G+
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 478 MKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-V 536
MK+++ + GL P + T+ +L + + + + EMK GF + + L+
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 537 YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVD 596
Y + GS + A+ R M +G+ + + + + G++E ++ +L + K +
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 597 LVLYTSILAHLVRCQE 612
+ Y S+L +E
Sbjct: 559 ELTYCSLLHAYANGKE 574
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 197/477 (41%), Gaps = 40/477 (8%)
Query: 223 SRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVD 282
S D++ S E +D + S A+ + + + K + AF F K + +D
Sbjct: 113 SGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLD 172
Query: 283 TQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQ 342
+I++ +G + ++ ++ SLD +Y +I + A SGR A +F+
Sbjct: 173 NSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFK 232
Query: 343 EMKERNIRPSFGIFSSLVDSMGKAGR---------------------------------- 368
+M+E +P+ ++ +++ GK G
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG 292
Query: 369 --LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
A +++ EM+ G Y +L++ Y K+ + A+++ +EM GF P+ Y
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
++ + A+ G LD AM + N M + G P TY+ LL +G+V+SAM ++ M N
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLA 546
AG +P + T+ A + + ++ KI E+ G S D+ + L+ +D
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 547 LRWL-RFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
+ + + M +G L + + G +E A + +++ DL Y ++LA
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 606 HLVRCQEEQNERHLMLILGATRHKAHKFM-CGLFTGPEQRKQPVL--SFVREFFQGI 659
L R + ++ + R K ++ C L K+ L S E + G+
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 174/398 (43%), Gaps = 4/398 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ Y L ++ ++ S+F+EM K I +F+A+ I+ K
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF---IKMYGNRGKFTEM 438
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F ++ G D T+N L+ +F G+ + +++ M+ A + T+ +I +
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
++ G + A +++ M + + P +++++ ++ + G + + K+ EM +P+
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y SL+ +Y ++ L +E+ P L +V +K L A F+
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
++++ GF P +T + ++ ++ V A + + M G P M+TY +++ + +
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 508 LVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
+ +IL E+ A G D +S + V+ Y ++ + A R M +SGI +
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 567 QLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
S + ++E A ++ + + + Y SI+
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 175/384 (45%), Gaps = 4/384 (1%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
+S PN Y +L + + D +LFD+M +K + + YN +I K
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM---ETKGCLPNVVTYNTLIDGYCKLR 254
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
K++ F + + G + + +YN +I +G + + M SLD TY
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
+I K G A + EM + PS ++SL+ SM KAG ++ AM+ +MR
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 383 GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
GL P+ Y +L++ +++ G ++ A R+ EM GF P+ Y ++ + +GK++ A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 443 MSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTL 502
+++ DM++ G P +YS +L S VD A+++ M G++P TY++++
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 503 LASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTN 561
++ A + EM +G D + + ++ Y +G ++ AL+ M G+ +
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 562 NFIIRQLFESCMKNGLYESAKPLL 585
L K AK LL
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLL 578
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 209/481 (43%), Gaps = 34/481 (7%)
Query: 171 LQFL----PNMTHILQALKIVNDIDASLSLYKWAKRQSWYVP----NEECYLLLFDALNQ 222
L+FL P+ L+ I I LYK A+ + V ++E L+F +L +
Sbjct: 66 LKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQE 125
Query: 223 SRDFD-AIQSLFDEMVQDSSKDGISSFD-------------------AYNRVIQYLAKAE 262
+ D + S+FD +V+ S+ +S D +YN V+ +++
Sbjct: 126 TYDLCYSTSSVFDLVVKSYSR--LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSK 183
Query: 263 K-LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
+ + A FK++ S + TYN LI F G + +++ ME C + TY
Sbjct: 184 RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
+I K ++D FKL + M + + P+ ++ +++ + + GR+ + EM
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
G Y +LI+ Y K G AL + EM + G P+ YT ++ S K+G ++
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
AM + M G P TY+ L++ + G ++ A ++ M + G P + TY A++
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 502 LLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRT 560
++ A +L +MK G S D VS S VL + + VD ALR R M GI+
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 561 NNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLM 620
+ L + + + A L E + D YT+++ C E E+ L
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN--AYCMEGDLEKALQ 541
Query: 621 L 621
L
Sbjct: 542 L 542
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 144/363 (39%), Gaps = 51/363 (14%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y ++ ++ + A+ +++ +G TYNALI G + + E M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ S D +Y ++ +S +D A ++ +EM E+ I+P +SSL+ + R
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A +Y EM GL P Y +LI +Y G L+ AL+L +EM + G P+ Y+++
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 430 VES-NAKS-------------------------------------------------GKL 439
+ N +S G +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
A +F M P + Y+ ++ H +G + A LY M +G T A+
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 500 LTLLASK-KLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGI 558
+ L + K+ ++ + I+ +++ S A ++ + ++G++D+ L L M G
Sbjct: 682 VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Query: 559 RTN 561
N
Sbjct: 742 LPN 744
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 126/315 (40%), Gaps = 54/315 (17%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
DAI L D + S D +S Y+ V+ ++ ++ A +++ G K DT TY
Sbjct: 433 DAIAVLEDMKEKGLSPDVVS----YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
++LI F + ++ ++YE M D TY +I + G L+ A +L EM E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM--------------------------- 379
+ + P +S L++ + K R A ++ +++
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 380 ----RGFGLR-------------------PSATMYASLIESYTKAGKLDTALRLWDEMKK 416
+GF ++ P T Y +I + +AG + A L+ EM K
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 417 AGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDS 476
+GF + +V++ K GK++ S+ + ++ L L+E++ G +D
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDV 728
Query: 477 AMKLYNSMTNAGLRP 491
+ + M G P
Sbjct: 729 VLDVLAEMAKDGFLP 743
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 29/271 (10%)
Query: 156 KRWKWGPELETHLDKLQFLPN---MTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEEC 212
+R K +L + ++ P+ T ++ A + D++ +L L+ + +P+
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV-LPDVVT 557
Query: 213 YLLLFDALN-QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCF 271
Y +L + LN QSR +A + L ++S ++ Y+ +I+ + E F
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT----YHTLIENCSNIE--------F 605
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
K V +LI F KG+ ++ +++ESM D + Y +MI ++
Sbjct: 606 KSVV------------SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
G + A+ L++EM + +LV ++ K G+++ + + + A
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA 713
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPN 422
L+E + G +D L + EM K GF PN
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 177/363 (48%), Gaps = 3/363 (0%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE-IYESMEAA 312
+I LA + + A F++++ SG K T+ YNAL+ ++ G P K E + ME
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTG-PLKDAESMVSEMEKR 368
Query: 313 QCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTA 372
S D TY L+I + +GR + A + +EM+ +++P+ +FS L+ G
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 373 MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
++ EM+ G++P Y +I+++ K LD A+ +D M G P+ + +++
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
+ K G+ A +F ME+ G LP +TY+ ++ + + D +L M + G+ P
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 493 MSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLR 551
+ T+T ++ + + A + L EMK++G + + L+ Y + G + A+ R
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 552 FMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQ 611
M S G++ + + L + ++ A +L+ + K D+V YT+++ L+R
Sbjct: 609 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Query: 612 EEQ 614
+ Q
Sbjct: 669 KFQ 671
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 117/241 (48%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN VI K L+ A F ++ G + D T+N LI G + E++E+ME
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
C ++TY +MI S R D +L +MK + I P+ ++LVD GK+GR +
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
A++ EM+ GL+PS+TMY +LI +Y + G + A+ + M G +P+ ++
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ + + A ++ M++ G P TY+ L++ + +Y M +G +
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 491 P 491
P
Sbjct: 687 P 687
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 139/296 (46%), Gaps = 3/296 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+E Y LL DA + +++ + + EM ++ +SF ++R++ + +
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEM--EAGDVQPNSF-VFSRLLAGFRDRGEWQKT 428
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F K+++ G K D Q YN +I F + ++ M + D T+ +I
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
K GR VA ++F+ M+ R P ++ +++S G R D ++ +M+ G+ P+
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+ +L++ Y K+G+ + A+ +EMK G +P+ +Y ++ + A+ G + A++ F
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
M G P+ + L+ + A + M G++P + TYT ++ L
Sbjct: 609 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 155/339 (45%), Gaps = 8/339 (2%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
Y+ +I L ++EKL AF +K + TYNALI K+ + M
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQK-----QTLTPLTYNALIGACARNNDIEKALNLIAKMR 224
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLD--VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
D Y L+I SL +S ++D + +L++E++ + + + ++ K+G
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
A+++ + GL S+I + +G+ A L++E++++G +P Y
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
+++ K+G L A S+ ++MEK G P TYS L++ + +G+ +SA + M
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLAL 547
++P ++ +L + ++L EMK++G D +V++ + K +D A+
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLE 586
M S GI + L + K+G + A+ + E
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 503
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 131/274 (47%), Gaps = 9/274 (3%)
Query: 336 VAFKLFQEMKERNIRPSFGI-FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
+A+ + +++ N+ S+ + +S L+ ++G++ +L A + + L P Y +L
Sbjct: 149 LAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQKQ---TLTP--LTYNAL 203
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM--SIFNDMEKA 452
I + + ++ AL L +M++ G++ ++ Y+L+++S +S K+D+ M ++ ++E+
Sbjct: 204 IGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERD 263
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
+ ++ A SG A++L GL +T +I++ LA A
Sbjct: 264 KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 323
Query: 513 AKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
+ E++ G A + L+ Y+K G + A + M+ G+ + L ++
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
Query: 572 CMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
+ G +ESA+ +L+ + + +++ +LA
Sbjct: 384 YVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLA 417
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 202/446 (45%), Gaps = 39/446 (8%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDE----MVQDSSKDGI------------SSFD 249
+VP C+ L + S F+ S F+E +V D GI SFD
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 250 ---------------AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFL 294
Y +I K ++E A F ++ G + +TY LI
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 295 NKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
G+ + FE+YE M+ + TY ++ L K GR AF++F EM+ER + +
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+++L+ + + +L+ A K+ +M+ G+ P+ Y +LI+ + GKL AL L ++
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
K G P+ Y ++V + G A + +ME+ G P+ TY+ L++ A S +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS-VDVSASDV 533
+ A++L SM GL P + TY+ ++ K ++ A+++ M +V + +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 534 LMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAA 593
++ Y K+GS AL+ L+ M+ + N R + E K + A+ L+E ++S
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 594 KVDLVLYTSILAHLVRCQEEQNERHL 619
TSIL+ + R +N+ H+
Sbjct: 545 DPS----TSILSLISRA---KNDSHV 563
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 91/221 (41%), Gaps = 2/221 (0%)
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
+Y +I SY ++ L+ ++ ++EM GF P + ++ S + S FN+
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE- 154
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
K+ + ++ L++ +G+++ + L +T G P + YT ++ K +
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 510 DVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQL 568
+ A + EM +G + VL+ + K+G M G+ N + +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 569 FESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
K+G + A + + ++V Y +++ L R
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 164/345 (47%), Gaps = 12/345 (3%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQS---LFDEMVQDSSKDGISSFDAYNRVIQYLA 259
QS+ V E C +++ LN D ++ LFDE ++ S + +F+ R + +
Sbjct: 163 QSFEV--EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 260 KAEK-LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ-CSLD 317
KAEK LEL + G G + D TYN LI F K+ E+++ +++ CS D
Sbjct: 221 KAEKALEL----LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 318 SSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM 377
TY MI K+G++ A L +M I P+ F+ LVD KAG + TA +I
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 378 EMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG 437
+M FG P + SLI+ Y + G++ RLW+EM G PN Y++++ +
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
+L A + + +P P Y+ +++ +G+V+ A + M +P T+T
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDG 541
++ K + A I +M A+G S D ++ S +L +K G
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 181/412 (43%), Gaps = 17/412 (4%)
Query: 217 FDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAK--AEKLELAFCCFKKV 274
++ L +S + L +M + DG+S NR++ +L AEK +L F +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVS---PNNRLLGFLVSSFAEKGKLHFATALLL 162
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
Q + N+L+ + + ++++ Q D+ T+ ++I L G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR-GFGLRPSATMYAS 393
+ A +L M P +++L+ K+ L+ A +++ +++ G P Y S
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+I Y KAGK+ A L D+M + G P + ++V+ AK+G++ TA I M G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
P T++ L++ + GQV +L+ M G+ P TY+ ++ L ++ + A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 514 KILLEMKAMGFSVDVSA-----SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQL 568
++L ++ S D+ + V+ + K G V+ A + M+ + + L
Sbjct: 403 ELLGQLA----SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 569 -FESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHL 619
CMK ++E A + V D + +S+L+ L++ + HL
Sbjct: 459 IIGHCMKGRMFE-AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 6/275 (2%)
Query: 235 EMVQDSSKDGISSFD--AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITL 292
EM +D + S D Y +I KA K+ A + G T+N L+
Sbjct: 262 EMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 293 FLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
+ G + EI M + C D T+ +I + G++ F+L++EM R + P+
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
+S L++++ RL A ++ ++ + P MY +I+ + KAGK++ A + +
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASG 472
EM+K +P+ +T+++ + G++ A+SIF+ M G P T S LL +G
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Query: 473 QVDSAMKLYNSMTNAGLRPG---MSTYTAILTLLA 504
A L N + G + T TA TL A
Sbjct: 502 MAKEAYHL-NQIARKGQSNNVVPLETKTANATLAA 535
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 133/303 (43%), Gaps = 39/303 (12%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRP----------SFG--------------- 354
TY L+ SL K+G D+A ++F+ MK + P SF
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 355 --------IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+ +SL++++ K R++ AMK++ E F + LI GK +
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS--TYSCL 464
AL L M G P+ Y +++ KS +L+ A +F D+ K+G + +P TY+ +
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSM 283
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ + +G++ A L + M G+ P T+ ++ A + A +I +M + G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 525 SVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES-CMKNGLYESAK 582
D V+ + ++ Y + G V R M++ G+ N F L + C +N L + A+
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK-AR 402
Query: 583 PLL 585
LL
Sbjct: 403 ELL 405
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 10/267 (3%)
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD-- 405
NIR SF ++ L S+ KAG D A +++ M+ G+ P+ + L+ S+ + GKL
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 406 TALRLWD-EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
TAL L E++ N L TL+ K +++ AM +F++ + T++ L
Sbjct: 158 TALLLQSFEVEGCCMVVNSLLNTLV-----KLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ G+ + A++L M+ G P + TY ++ ++ A+++ ++K+
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 525 -SVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAK 582
S D V+ + ++ Y K G + A L M GI N L + K G +A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 583 PLLETYVNSAAKVDLVLYTSILAHLVR 609
+ ++ D+V +TS++ R
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCR 359
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 164/345 (47%), Gaps = 12/345 (3%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQS---LFDEMVQDSSKDGISSFDAYNRVIQYLA 259
QS+ V E C +++ LN D ++ LFDE ++ S + +F+ R + +
Sbjct: 163 QSFEV--EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 260 KAEK-LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ-CSLD 317
KAEK LEL + G G + D TYN LI F K+ E+++ +++ CS D
Sbjct: 221 KAEKALEL----LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 318 SSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM 377
TY MI K+G++ A L +M I P+ F+ LVD KAG + TA +I
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 378 EMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG 437
+M FG P + SLI+ Y + G++ RLW+EM G PN Y++++ +
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
+L A + + +P P Y+ +++ +G+V+ A + M +P T+T
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDG 541
++ K + A I +M A+G S D ++ S +L +K G
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 181/412 (43%), Gaps = 17/412 (4%)
Query: 217 FDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAK--AEKLELAFCCFKKV 274
++ L +S + L +M + DG+S NR++ +L AEK +L F +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVS---PNNRLLGFLVSSFAEKGKLHFATALLL 162
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
Q + N+L+ + + ++++ Q D+ T+ ++I L G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR-GFGLRPSATMYAS 393
+ A +L M P +++L+ K+ L+ A +++ +++ G P Y S
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+I Y KAGK+ A L D+M + G P + ++V+ AK+G++ TA I M G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
P T++ L++ + GQV +L+ M G+ P TY+ ++ L ++ + A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 514 KILLEMKAMGFSVDVSA-----SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQL 568
++L ++ S D+ + V+ + K G V+ A + M+ + + L
Sbjct: 403 ELLGQLA----SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 569 -FESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHL 619
CMK ++E A + V D + +S+L+ L++ + HL
Sbjct: 459 IIGHCMKGRMFE-AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 6/275 (2%)
Query: 235 EMVQDSSKDGISSFD--AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITL 292
EM +D + S D Y +I KA K+ A + G T+N L+
Sbjct: 262 EMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 293 FLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
+ G + EI M + C D T+ +I + G++ F+L++EM R + P+
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
+S L++++ RL A ++ ++ + P MY +I+ + KAGK++ A + +
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASG 472
EM+K +P+ +T+++ + G++ A+SIF+ M G P T S LL +G
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Query: 473 QVDSAMKLYNSMTNAGLRPG---MSTYTAILTLLA 504
A L N + G + T TA TL A
Sbjct: 502 MAKEAYHL-NQIARKGQSNNVVPLETKTANATLAA 535
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 133/303 (43%), Gaps = 39/303 (12%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRP----------SFG--------------- 354
TY L+ SL K+G D+A ++F+ MK + P SF
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 355 --------IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+ +SL++++ K R++ AMK++ E F + LI GK +
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS--TYSCL 464
AL L M G P+ Y +++ KS +L+ A +F D+ K+G + +P TY+ +
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSM 283
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ + +G++ A L + M G+ P T+ ++ A + A +I +M + G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 525 SVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES-CMKNGLYESAK 582
D V+ + ++ Y + G V R M++ G+ N F L + C +N L + A+
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK-AR 402
Query: 583 PLL 585
LL
Sbjct: 403 ELL 405
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 10/267 (3%)
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD-- 405
NIR SF ++ L S+ KAG D A +++ M+ G+ P+ + L+ S+ + GKL
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 406 TALRLWD-EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
TAL L E++ N L TL+ K +++ AM +F++ + T++ L
Sbjct: 158 TALLLQSFEVEGCCMVVNSLLNTLV-----KLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ G+ + A++L M+ G P + TY ++ ++ A+++ ++K+
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 525 -SVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAK 582
S D V+ + ++ Y K G + A L M GI N L + K G +A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 583 PLLETYVNSAAKVDLVLYTSILAHLVR 609
+ ++ D+V +TS++ R
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCR 359
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 176/394 (44%), Gaps = 14/394 (3%)
Query: 142 FMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAK 201
F + V K++EV+KR P + + L + + +A + +++
Sbjct: 737 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM----------I 786
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
RQ +P+ Y L D + D A F EM S+D Y +I +
Sbjct: 787 RQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEM---HSRDITPDVLTYTAIISGFCQI 842
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
+ A F ++ G + D+ T+ LI + G +F ++ M A CS + TY
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
+I L K G LD A +L EM + ++P+ ++S+V+ + K+G ++ A+K+ E
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
GL Y +L+++Y K+G++D A + EM G +P + +++ G L+
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1022
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
+ N M G P +T++ L++ + + +A +Y M + G+ P TY ++
Sbjct: 1023 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 1082
Query: 502 LLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
+ + A + EMK GFSV VS VL+
Sbjct: 1083 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 157/337 (46%), Gaps = 1/337 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+YN VI ++ + +++ A ++ G D +Y+ ++ + G K +++ E M
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ +S Y +I L + +L A + F EM + I P ++++L+D K G +
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A K + EM + P Y ++I + + G + A +L+ EM G P+ +T +
Sbjct: 811 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ K+G + A + N M +AG P TY+ L++ G +DSA +L + M GL
Sbjct: 871 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALR 548
+P + TY +I+ L ++ A K++ E +A G + D LM Y K G +D A
Sbjct: 931 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
L+ M G++ L +G+ E + LL
Sbjct: 991 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 152/330 (46%), Gaps = 3/330 (0%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
Y P+ Y + + + + D + L + M + K +S+ Y +I L + KL
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP--NSY-IYGSIIGLLCRICKLA 776
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
A F ++ G DT Y LI F +G + + + M + + D TY +I
Sbjct: 777 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+ G + A KLF EM + + P F+ L++ KAG + A +++ M G
Sbjct: 837 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 896
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P+ Y +LI+ K G LD+A L EM K G +PN Y IV KSG ++ A+ +
Sbjct: 897 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 956
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+ E AG TY+ L++ + SG++D A ++ M GL+P + T+ ++
Sbjct: 957 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 1016
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
+++ K+L M A G + + + + L+
Sbjct: 1017 HGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 198/478 (41%), Gaps = 25/478 (5%)
Query: 148 VAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQAL-KIVNDIDASLSLYKWAKRQSWY 206
V +I V+K + P L L + H++ L KI D L + WA+ +
Sbjct: 502 VHQITNVIKLRRAEP-LRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRR-- 558
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
N E ++ S+D QSL + + SF + ++ Y K
Sbjct: 559 DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKD----- 613
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
GS D + ++ + ++ GL ++ ++E M L + + +
Sbjct: 614 --------WGS----DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLT 661
Query: 327 SLAKSG-RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L+K + A +F+E E + + ++ ++ + + GR+ A + + M G
Sbjct: 662 RLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT 721
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P Y++++ Y + G+LD +L + MK+ G +PN +Y I+ + KL A
Sbjct: 722 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 781
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
F++M + G LP Y+ L++ G + +A K + M + + P + TYTAI++
Sbjct: 782 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 841
Query: 506 KKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFI 564
+ A K+ EM G D V+ ++++ Y K G + A R M +G N
Sbjct: 842 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 901
Query: 565 IRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLI 622
L + K G +SA LL + ++ Y SI+ L C+ E + L+
Sbjct: 902 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL--CKSGNIEEAVKLV 957
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 38/277 (13%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y L D L + D D+ L EM + + I + YN ++ L K+ +E A
Sbjct: 897 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT---YNSIVNGLCKSGNIEEA 953
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME----------------- 310
+ + +G DT TY L+ + G K+ EI + M
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 311 ------------------AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
A + +++T+ ++ L A ++++M R + P
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
+ +LV KA + A ++ EM+G G S + Y+ LI+ + K K A ++D
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
+M++ G + ++ ++ K + DT + +++
Sbjct: 1134 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1170
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 176/394 (44%), Gaps = 14/394 (3%)
Query: 142 FMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAK 201
F + V K++EV+KR P + + L + + +A + +++
Sbjct: 737 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM----------I 786
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
RQ +P+ Y L D + D A F EM S+D Y +I +
Sbjct: 787 RQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEM---HSRDITPDVLTYTAIISGFCQI 842
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
+ A F ++ G + D+ T+ LI + G +F ++ M A CS + TY
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
+I L K G LD A +L EM + ++P+ ++S+V+ + K+G ++ A+K+ E
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
GL Y +L+++Y K+G++D A + EM G +P + +++ G L+
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1022
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
+ N M G P +T++ L++ + + +A +Y M + G+ P TY ++
Sbjct: 1023 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 1082
Query: 502 LLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
+ + A + EMK GFSV VS VL+
Sbjct: 1083 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 157/337 (46%), Gaps = 1/337 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+YN VI ++ + +++ A ++ G D +Y+ ++ + G K +++ E M
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ +S Y +I L + +L A + F EM + I P ++++L+D K G +
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A K + EM + P Y ++I + + G + A +L+ EM G P+ +T +
Sbjct: 811 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ K+G + A + N M +AG P TY+ L++ G +DSA +L + M GL
Sbjct: 871 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALR 548
+P + TY +I+ L ++ A K++ E +A G + D LM Y K G +D A
Sbjct: 931 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
L+ M G++ L +G+ E + LL
Sbjct: 991 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 152/330 (46%), Gaps = 3/330 (0%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
Y P+ Y + + + + D + L + M + K +S+ Y +I L + KL
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP--NSY-IYGSIIGLLCRICKLA 776
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
A F ++ G DT Y LI F +G + + + M + + D TY +I
Sbjct: 777 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+ G + A KLF EM + + P F+ L++ KAG + A +++ M G
Sbjct: 837 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 896
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P+ Y +LI+ K G LD+A L EM K G +PN Y IV KSG ++ A+ +
Sbjct: 897 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 956
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+ E AG TY+ L++ + SG++D A ++ M GL+P + T+ ++
Sbjct: 957 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 1016
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
+++ K+L M A G + + + + L+
Sbjct: 1017 HGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 198/478 (41%), Gaps = 25/478 (5%)
Query: 148 VAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQAL-KIVNDIDASLSLYKWAKRQSWY 206
V +I V+K + P L L + H++ L KI D L + WA+ +
Sbjct: 502 VHQITNVIKLRRAEP-LRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRR-- 558
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
N E ++ S+D QSL + + SF + ++ Y K
Sbjct: 559 DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKD----- 613
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
GS D + ++ + ++ GL ++ ++E M L + + +
Sbjct: 614 --------WGS----DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLT 661
Query: 327 SLAKSG-RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L+K + A +F+E E + + ++ ++ + + GR+ A + + M G
Sbjct: 662 RLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT 721
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P Y++++ Y + G+LD +L + MK+ G +PN +Y I+ + KL A
Sbjct: 722 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 781
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
F++M + G LP Y+ L++ G + +A K + M + + P + TYTAI++
Sbjct: 782 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 841
Query: 506 KKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFI 564
+ A K+ EM G D V+ ++++ Y K G + A R M +G N
Sbjct: 842 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 901
Query: 565 IRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLI 622
L + K G +SA LL + ++ Y SI+ L C+ E + L+
Sbjct: 902 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL--CKSGNIEEAVKLV 957
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 38/277 (13%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y L D L + D D+ L EM + + I + YN ++ L K+ +E A
Sbjct: 897 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT---YNSIVNGLCKSGNIEEA 953
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME----------------- 310
+ + +G DT TY L+ + G K+ EI + M
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 311 ------------------AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
A + +++T+ ++ L A ++++M R + P
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
+ +LV KA + A ++ EM+G G S + Y+ LI+ + K K A ++D
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
+M++ G + ++ ++ K + DT + +++
Sbjct: 1134 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1170
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 201/471 (42%), Gaps = 45/471 (9%)
Query: 178 THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQ-SRDFDAIQSLFDEM 236
T IL A + ++ L++ K P Y ++ D + R + I + DEM
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMG-PSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 237 VQDSSKDGISSFDAY--NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFL 294
K FD + + V+ A+ L A F +++ G + T TYNAL+ +F
Sbjct: 273 RSKGLK-----FDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 295 NKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
G+ ++ + + ME C DS TY ++ + ++G A + + M ++ + P+
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+++++D+ GKAG+ D A+K++ M+ G P+ Y +++ K + + +++ +M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
K G PN + ++ G +F +M+ GF P T++ L+ + G
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS-VDVSASDV 533
A K+Y MT AG ++TY A+L LA K ++ +MK+ GF + S S +
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 534 LMVY---------------IKDGSVDLALRWLR--------------------FMDSSGI 558
L Y IK+G + + LR G
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 559 RTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ + I + +N +Y+ A+ +LE+ DLV Y S++ VR
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 152/338 (44%), Gaps = 2/338 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY-KSFEIYES 308
AY ++ ++ K E A F++++ G TYN ++ +F G + K + +
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M + D T ++ + A+ G L A + F E+K P +++L+ GKAG
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
A+ + EM + Y L+ +Y +AG A + + M K G PN YT
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++++ K+GK D A+ +F M++AG +P TY+ +L + + + +K+ M + G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLAL 547
P +T+ +L L +K + ++ EMK+ GF D + L+ Y + GS A
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
+ M +G L + + G + S + ++
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 156/356 (43%), Gaps = 1/356 (0%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
Y VI KA K + A F ++ +G +T TYNA+++L K + ++ M+
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ CS + +T+ M+ G ++F+EMK P F++L+ + G+ G
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
A K+Y EM G T Y +L+ + + G + + +MK GF+P Y+L++
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ AK G I N +++ P+ LL + + + + + G +
Sbjct: 569 QCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYK 628
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRW 549
P M + ++L++ + D A IL ++ G S D+ + LM +Y++ G A
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
L+ ++ S ++ + + + + GL + A +L + + Y + ++
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 138/331 (41%), Gaps = 37/331 (11%)
Query: 316 LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR------- 368
LD Y ++ + +++G+ + A LF+ MKE P+ ++ ++D GK GR
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 369 -----------------------------LDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
L A + + E++ G P Y +L++ +
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
KAG AL + EM++ + Y +V + ++G A + M K G +P
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
TY+ +++ + +G+ D A+KL+ SM AG P TY A+L+LL K + K+L +M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 520 KAMGFSVDVSASDVLMVYIKDGSVD-LALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLY 578
K+ G S + + + ++ + +D R R M S G + L + + G
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 579 ESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
A + + + Y ++L L R
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/404 (19%), Positives = 170/404 (42%), Gaps = 4/404 (0%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
+PN Y + DA ++ D LF M + + + YN V+ L K +
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC---VPNTCTYNAVLSLLGKKSRSNE 439
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
++ +G + T+N ++ L NKG+ ++ M++ D T+ +I
Sbjct: 440 MIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLIS 499
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+ + G A K++ EM +++L++++ + G + + +M+ G +P
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
+ T Y+ +++ Y K G R+ + +K+ P++ L ++ +N K L + F
Sbjct: 560 TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAF 619
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
+K G+ P ++ +L + + D A + S+ GL P + TY +++ + +
Sbjct: 620 TLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRR 679
Query: 507 KLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFII 565
A +IL ++ D VS + V+ + + G + A+R L M GIR F
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 566 RQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
G++ + ++E + + + + + ++ R
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
+N ++ + + A + ++ G D TYN+L+ +++ +G +K+ EI +++E
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+Q D +Y +I + G + A ++ EM ER IRP +++ V G
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
+ M RP+ + +++ Y +AGK A+ ++K
Sbjct: 754 EIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 19/246 (7%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDG--------ISSFDAYNRVIQY 257
+ P E Y L+ + ++ I E +++ K+G + + N +
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGI-----ERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 258 LAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLD 317
LA +E+ AF FKK G K D +N+++++F + ++ I ES+ S D
Sbjct: 612 LAGSER---AFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 318 SSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM 377
TY ++ + G A ++ + +++ ++P +++++ + G + A+++
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 378 EMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG 437
EM G+RP Y + + YT G + + M K RPN + ++V+ ++G
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Query: 438 KLDTAM 443
K AM
Sbjct: 786 KYSEAM 791
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D + M+ ++ D A + + ++E + P ++SL+D + G A +I
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+ L+P Y ++I+ + + G + A+R+ EM + G RP Y V
Sbjct: 690 KTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM 749
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAM 478
G + M K P T+ +++ + +G+ AM
Sbjct: 750 GMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 192/420 (45%), Gaps = 5/420 (1%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
D +++L++ R S +P+ + F A+ +++ F+ + ++ + I +
Sbjct: 60 DDAIALFQEMIR-SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL-- 116
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
N +I + K A+ KV G + DT T+N LI +G ++ + + M
Sbjct: 117 -NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
C D TY ++ + +SG +A L ++M+ERN++ +S+++DS+ + G +D
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
A+ ++ EM G++ S Y SL+ KAGK + L +M PN + +++
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ K GKL A ++ +M G P TY+ L++ + ++ A + + M
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRW 549
P + T+T+++ K VD K+ + G + V+ S ++ + + G + LA
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ M S G+ + L + NG E A + E S + +V+YT+I+ + +
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 475
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 183/391 (46%), Gaps = 9/391 (2%)
Query: 186 IVNDI----DASLSLYKWAKRQSWYVPNEE-CYLLLFDALNQSRDFDAIQSLFDEMVQDS 240
IVN I D SL+L K + V + Y + D+L + DA SLF EM
Sbjct: 189 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 248
Query: 241 SKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY 300
K SS YN +++ L KA K K + + T+N L+ +F+ +G
Sbjct: 249 IK---SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 305
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV 360
++ E+Y+ M S + TY ++ RL A + M P F+SL+
Sbjct: 306 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365
Query: 361 DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFR 420
R+D MK++ + GL +A Y+ L++ + ++GK+ A L+ EM G
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425
Query: 421 PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
P+ Y ++++ +GKL+ A+ IF D++K+ Y+ ++E G+V+ A L
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485
Query: 481 YNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS-VDVSASDVLMVYIK 539
+ S+ G++P + TYT +++ L K + A +L +M+ G + D + + ++ +++
Sbjct: 486 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 545
Query: 540 DGSVDLALRWLRFMDSSGIRTNNFIIRQLFE 570
DG + + + + M S G + I+ + +
Sbjct: 546 DGDLTASAKLIEEMKSCGFSADASSIKMVID 576
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 133/316 (42%), Gaps = 42/316 (13%)
Query: 330 KSGRLDV----AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI--YMEMRG-- 381
+SG +D+ A LFQEM PS FS ++ + + + + +E+ G
Sbjct: 51 RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 110
Query: 382 -------------------------------FGLRPSATMYASLIESYTKAGKLDTALRL 410
G P T + +LI+ GK+ A+ L
Sbjct: 111 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 170
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
D M + G +P+ Y IV +SG A+ + ME+ TYS +++
Sbjct: 171 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 230
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
G +D+A+ L+ M G++ + TY +++ L + A +L +M + +V
Sbjct: 231 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 290
Query: 531 SDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES-CMKNGLYESAKPLLETY 588
+VL+ V++K+G + A + M + GI N L + CM+N L E A +L+
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE-ANNMLDLM 349
Query: 589 VNSAAKVDLVLYTSIL 604
V + D+V +TS++
Sbjct: 350 VRNKCSPDIVTFTSLI 365
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 185/371 (49%), Gaps = 8/371 (2%)
Query: 176 NMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDE 235
++ ++ L++ D+ + + +W R+S + P+ C+ LL DA Q + +SL+ +
Sbjct: 121 DLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQ 180
Query: 236 MVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQG---SGGKVDTQTYNALIT- 291
+++ + + D Y +I+ A +E A ++Q S + YNA I
Sbjct: 181 LLESRY---VPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 237
Query: 292 LFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP 351
L KG ++ ++++ M+ +C + TY LMI K+ + +++KL+ EM+ +P
Sbjct: 238 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 297
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
+ +++LV++ + G + A +I+ +++ GL P +Y +L+ESY++AG A ++
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
M+ G P+ Y ++V++ ++G A ++F +M++ G PT ++ LL ++ +
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSAS 531
V + M+ G+ P ++L L KIL EM+ + D+S
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 477
Query: 532 DVLM-VYIKDG 541
++L+ +Y K G
Sbjct: 478 NILINIYGKAG 488
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 173/387 (44%), Gaps = 2/387 (0%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
+S YVP E+ Y LL A + + + + EM YN I+ L K +
Sbjct: 183 ESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRK 242
Query: 263 -KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
E A F++++ K T+TYN +I L+ Y S+++Y M + QC + TY
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
++ + A+ G + A ++F++++E + P ++++L++S +AG A +I+ M+
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
G P Y ++++Y +AG A +++EMK+ G P + L++ + +K+ +
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
+I +M + G P + +L ++ GQ K+ M N +STY ++
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482
Query: 502 LLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRT 560
+ ++ ++ +E+K F D V+ + + Y + L M SG
Sbjct: 483 IYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAP 542
Query: 561 NNFIIRQLFESCMKNGLYESAKPLLET 587
+ + L +C E +L T
Sbjct: 543 DGGTAKVLLSACSSEEQVEQVTSVLRT 569
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 152/341 (44%), Gaps = 4/341 (1%)
Query: 179 HILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQ 238
+I +K + + ++ +++ KR P E Y L+ + ++ L+ EM
Sbjct: 234 YIEGLMKRKGNTEEAIDVFQRMKRDRCK-PTTETYNLMINLYGKASKSYMSWKLYCEMRS 292
Query: 239 DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGL 298
K I ++ A ++ A+ E A F+++Q G + D YNAL+ + G
Sbjct: 293 HQCKPNICTYTA---LVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 299 PYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSS 358
PY + EI+ M+ C D ++Y +M+ + ++G A +F+EMK I P+
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 359 LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
L+ + KA + I EM G+ P + S++ Y + G+ ++ EM+
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 469
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAM 478
+ Y +++ K+G L+ +F ++++ F P T++ + ++ +
Sbjct: 470 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 529
Query: 479 KLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
+++ M ++G P T +L+ +S++ V+ +L M
Sbjct: 530 EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/280 (17%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y L +A + + + +F+++ +D + + YN +++ ++A A
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVY---VYNALMESYSRAGYPYGA 353
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F +Q G + D +YN ++ + GL + ++E M+ + ++ L++ +
Sbjct: 354 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSS----------------------------- 358
+K+ + + +EM E + P + +S
Sbjct: 414 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
Query: 359 ------LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
L++ GKAG L+ ++++E++ RP + S I +Y++ L +++
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
EM +G P+ G +++ + + +++ S+ M K
Sbjct: 534 EMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 573
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 176/393 (44%), Gaps = 4/393 (1%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y LL D L + R+ DA + L EMV S I + Y+ I ++K +E A F
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMV--SHGINIKPY-MYDCCICVMSKEGVMEKAKALFD 371
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
+ SG Q Y +LI + + + +E+ M+ + TY ++ + SG
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
LD A+ + +EM RP+ I+++L+ + + R AM++ EM+ G+ P Y
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
SLI +KA ++D A EM + G +PN Y + ++ + +A +M +
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G LP + L+ + G+V A Y SM + G+ TYT ++ L VD A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 513 AKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
+I EM+ G + DV + VL+ + K G++ A M G+ N I L
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 572 CMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
++G E AK LL+ + V Y +I+
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 190/426 (44%), Gaps = 11/426 (2%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
++ P+ CY L L++++ D +S EMV++ K ++ A+ I +A
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF---ISGYIEA 535
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
+ A K+++ G + LI + KG ++ Y SM D+ TY
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
+++ L K+ ++D A ++F+EM+ + I P + L++ K G + A I+ EM
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
GL P+ +Y L+ + ++G+++ A L DEM G PN Y I++ KSG L
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
A +F++M+ G +P Y+ L++ V+ A+ ++ + G + + A++
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALIN 774
Query: 502 LLASKKLVDVAAKILLEMKAMGFSV-----DVSASDVLMVYIKDGSVDLALRWLRFMDSS 556
+ ++ ++L + F DV+ + ++ K+G+++ A M ++
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 557 GIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNE 616
+ L K G P+ + + + + D ++Y+ I+ ++ E
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK--EGMTT 892
Query: 617 RHLMLI 622
+ L+L+
Sbjct: 893 KALVLV 898
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 127/302 (42%), Gaps = 1/302 (0%)
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M++ SLD+ TY L+I L K D A L EM I ++ + M K G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
++ A ++ M GL P A YASLIE Y + + L EMKK + Y
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
+V+ SG LD A +I +M +G P Y+ L++ + + AM++ M G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLAL 547
+ P + Y +++ L+ K +D A L+EM G + + YI+ A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
++++ M G+ N + L K G A + V+ D YT ++ L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 608 VR 609
+
Sbjct: 603 FK 604
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 3/246 (1%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
TY+++I L K RL+ A L EM + +S L+D + K D A + EM
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
G+ MY I +K G ++ A L+D M +G P Y ++E + +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
+ +M+K + +P TY +++ +SG +D A + M +G RP + YT +
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 500 L-TLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSG 557
+ T L + + D A ++L EMK G + D+ + L++ + K +D A +L M +G
Sbjct: 459 IKTFLQNSRFGD-AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 558 IRTNNF 563
++ N F
Sbjct: 518 LKPNAF 523
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 139/313 (44%), Gaps = 8/313 (2%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y +L + L ++ D + +F EM + S Y +I +K ++ A F
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS---YGVLINGFSKLGNMQKASSIFD 651
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
++ G + YN L+ F G K+ E+ + M ++ TY +I KSG
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
L AF+LF EMK + + P ++++LVD + ++ A+ I+ + G S +
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFN 770
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGF----RPNYGLYTLIVESNAKSGKLDTAMSIFND 448
+LI K GK + + + + F +PN Y ++++ K G L+ A +F+
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
M+ A +PT TY+ LL + G+ +++ AG+ P Y+ I+ + +
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 509 VDVAAKILLEMKA 521
A ++ +M A
Sbjct: 891 TTKALVLVDQMFA 903
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/514 (19%), Positives = 205/514 (39%), Gaps = 41/514 (7%)
Query: 147 AVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWY 206
A A+I ++K+ W L + ++ P + + K V+D LS + W Q
Sbjct: 34 ASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVT 93
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
+ + L L F+ S+ + M++ + + ++ +++
Sbjct: 94 EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVA----EVWSSIVR---------- 139
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
C ++ G D + L ++ KG ++ ++ S + S ++++
Sbjct: 140 ---CSQEFVGKSD--DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLD 194
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG------------------- 367
+L + RLD+ + +++ M ERN+ + L+ + +AG
Sbjct: 195 ALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTA 254
Query: 368 --RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL 425
+D A+K+ M GL P Y LI+ K +L+ A L EM G +
Sbjct: 255 TLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHT 314
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
Y+L+++ K D A + ++M G P Y C + + + G ++ A L++ M
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 486 NAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVD 544
+GL P Y +++ +K V ++L+EMK + + V+ G +D
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 545 LALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
A ++ M +SG R N I L ++ ++N + A +L+ D+ Y S++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 605 AHLVRCQEEQNERHLMLILGATRHKAHKFMCGLF 638
L + + R ++ + K + F G F
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 17/264 (6%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y + D +S D LFDEM K + Y ++ + +E A
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEM---KLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLD------SSTY 321
F G T +NALI G E+ + S D TY
Sbjct: 752 ITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG--SFDRFGKPNDVTY 808
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
+MI L K G L+ A +LF +M+ N+ P+ ++SL++ K GR ++ E
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEM--KKA---GFRPNYGLYTLIVESNAKS 436
G+ P MY+ +I ++ K G AL L D+M K A G + + ++ AK
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 437 GKLDTAMSIFNDMEKAGFLPTPST 460
G+++ A + +M + ++P +T
Sbjct: 929 GEMEVAEKVMENMVRLQYIPDSAT 952
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 184/427 (43%), Gaps = 39/427 (9%)
Query: 178 THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMV 237
TH++ L + ID ++ L+ K + P Y +L +L S +L EM
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 238 QDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKG 297
+ K I + Y +I L K E A ++ G + TYNALI + +G
Sbjct: 351 ETGIKPNIHT---YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 298 LPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS 357
+ + ++ E ME+ + S ++ TY +I KS + A + +M ER + P ++
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYN 466
Query: 358 SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA 417
SL+D ++G D+A ++ M GL P Y S+I+S K+ +++ A L+D +++
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 418 GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSA 477
G PN +YT +++ K+GK+D A + M LP T++ L+ A G++ A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 478 MKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVY 537
L M GL+P +ST T ++ L
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRL---------------------------------- 612
Query: 538 IKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDL 597
+KDG D A + M SSG + + ++ + G A+ ++ + DL
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 598 VLYTSIL 604
Y+S++
Sbjct: 673 FTYSSLI 679
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 179/384 (46%), Gaps = 13/384 (3%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y +L D+L F+ + L +M++ K + + YN +I K +E A
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLE---KGLMPNVITYNALINGYCKRGMIEDA 412
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+ ++ +T+TYN LI + + +K+ + M + D TY +I
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+SG D A++L M +R + P ++S++DS+ K+ R++ A ++ + G+ P+
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
MY +LI+ Y KAGK+D A + ++M PN + ++ GKL A +
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA-ILTLLASK 506
M K G PT ST + L+ G D A + M ++G +P TYT I T
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 507 KLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNF-- 563
+L+D A ++ +M+ G S D+ + S ++ Y G + A L+ M +G +
Sbjct: 652 RLLD-AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Query: 564 --IIRQLFESCMKNGLYESAKPLL 585
+I+ L E MK G + ++P L
Sbjct: 711 LSLIKHLLE--MKYGKQKGSEPEL 732
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 176/418 (42%), Gaps = 51/418 (12%)
Query: 239 DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGL 298
DS D + D + + + K E+ EL + K+ YN L+ GL
Sbjct: 154 DSVGDALYVLD----LCRKMNKDERFELKY-----------KLIIGCYNTLLNSLARFGL 198
Query: 299 PYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSS 358
+ ++Y M + + TY M+ K G ++ A + ++ E + P F ++S
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 359 LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
L+ + LD+A K++ EM G R + Y LI A ++D A+ L+ +MK
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAM 478
P YT++++S S + A+++ +ME+ G P TY+ L++ + + + A
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 479 KLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM------------------- 519
+L M GL P + TY A++ + +++ A ++ M
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 520 ------KAMGFSVDVSASDVL---MVY-------IKDGSVDLALRWLRFMDSSGIRTNNF 563
KAMG + VL + Y + G+ D A R L M+ G+ + +
Sbjct: 439 CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 564 IIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLML 621
+ +S K+ E A L ++ ++V+YT+++ + + +E HLML
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK-AGKVDEAHLML 555
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 167/408 (40%), Gaps = 23/408 (5%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
VP++ Y + D+L +S+ + LFD + Q + + A +I KA K++
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA---LIDGYCKAGKVDE 550
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A +K+ ++ T+NALI G ++ + E M ST ++I
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
L K G D A+ FQ+M +P +++ + + + GRL A + +MR G+ P
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES--NAKSGK------ 438
Y+SLI+ Y G+ + A + M+ G P+ + +++ K GK
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 439 ----------LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT-NA 487
DT + + M + P +Y L+ G + A K+++ M N
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLA 546
G+ P + A+L+ K + AAK++ +M +G + + VL+ + K G +
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG 850
Query: 547 LRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAK 594
+ + G + + + + K GL E+ L + K
Sbjct: 851 TSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 132/305 (43%), Gaps = 22/305 (7%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
+L L + DFD S F +M+ +K ++ + IQ + +L A K+
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF---IQTYCREGRLLDAEDMMAKM 663
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL--AKSG 332
+ +G D TY++LI + + G +F++ + M C T+ +I L K G
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 333 R----------------LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
+ D +L ++M E ++ P+ + L+ + + G L A K++
Sbjct: 724 KQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVF 783
Query: 377 MEM-RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
M R G+ PS ++ +L+ K K + A ++ D+M G P +++ K
Sbjct: 784 DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK 843
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
G+ + S+F ++ + G+ + +++ G V++ +L+N M G + T
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT 903
Query: 496 YTAIL 500
Y+ ++
Sbjct: 904 YSLLI 908
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 166/355 (46%), Gaps = 21/355 (5%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN ++ K++ LE + F ++ G K D T+ +I+ G+P ++ E +E M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ C D+ T MI + ++G +D+A L+ + R FS+L+ G +G D
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
+ IY EM+ G++P+ +Y LI+S +A + A ++ ++ GF PN+ Y +V
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA-GL 489
+ ++ D A++I+ +M++ G T Y+ LL M A + VD A +++ M N
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC 417
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALR 548
P T+++++T+ A V A LL+M+ GF + + V+ Y K VD +R
Sbjct: 418 DPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKN--------------GLYESAKPLLETYV 589
+ GI ++ F C+ N G E AKP L V
Sbjct: 478 TFDQVLELGITPDD-----RFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVV 527
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 4/316 (1%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y + +S+D + + LFDEM++ K ++F +I + + A F+
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATF---TTIISCARQNGVPKRAVEWFE 234
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
K+ G + D T A+I + G + +Y+ + +D+ T+ +I SG
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
D +++EMK ++P+ I++ L+DSMG+A R A IY ++ G P+ + YA
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
+L+ +Y +A D AL ++ EMK+ G LY ++ A + +D A IF DM+
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNC 414
Query: 453 GFL-PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
P T+S L+ ++A SG+V A M AG P + T+++ K VD
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 512 AAKILLEMKAMGFSVD 527
+ ++ +G + D
Sbjct: 475 VVRTFDQVLELGITPD 490
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 148/335 (44%), Gaps = 41/335 (12%)
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
+ G GGK+ Q +A++TL + +E + S + Y + + KS
Sbjct: 133 ITGFGGKLFEQ--DAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKD 190
Query: 334 LDVAFKLFQEMKERNIRP-----------------------------SFGI------FSS 358
L+ + KLF EM ER I+P SFG ++
Sbjct: 191 LEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAA 250
Query: 359 LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
++D+ G+AG +D A+ +Y R R A +++LI Y +G D L +++EMK G
Sbjct: 251 MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAM 478
+PN +Y +++S ++ + A I+ D+ GF P STY+ L+ + + D A+
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDAL 370
Query: 479 KLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA---SDVLM 535
+Y M GL + Y +L++ A + VD A +I +MK + D + S ++
Sbjct: 371 AIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCE-TCDPDSWTFSSLIT 429
Query: 536 VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFE 570
VY G V A L M +G F++ + +
Sbjct: 430 VYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQ 464
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 177 MTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEM 236
M ++ A ++D +LSLY A+ + W + + + L S ++D ++++EM
Sbjct: 248 MAAMIDAYGRAGNVDMALSLYDRARTEKWRI-DAVTFSTLIRIYGVSGNYDGCLNIYEEM 306
Query: 237 VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNK 296
K + YNR+I + +A++ A +K + +G + TY AL+ +
Sbjct: 307 KALGVKPNLV---IYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA 363
Query: 297 GLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE-RNIRPSFGI 355
+ IY M+ SL Y ++ A + +D AF++FQ+MK P
Sbjct: 364 RYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWT 423
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
FSSL+ +GR+ A ++MR G P+ + S+I+ Y KA ++D +R +D++
Sbjct: 424 FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 416 KAGFRPN 422
+ G P+
Sbjct: 484 ELGITPD 490
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 174/372 (46%), Gaps = 3/372 (0%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN +I K + +LA+ ++ ++ +T+ LI ++ GL ++ + ME
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
C D + ++I +L++ R A F +K+R P ++++LV +AG +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
A K++ EM+ G+ P+ Y+ +I++ + G++ A ++ +M +G PN + ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ K+G+ + + ++N M+K G P TY+ L+E H +++A+K+ N+M
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRW 549
ST+ I + K+ V+ A ++ +M + ++LM +++ S D+ L+
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKV-DLVLYTSILAHLV 608
+ MD + N R L G + +A L + V L LY +LA L
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLR 512
Query: 609 RCQEEQNERHLM 620
R + + L+
Sbjct: 513 RAGQLKKHEELV 524
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 155/328 (47%), Gaps = 5/328 (1%)
Query: 193 SLSLYKWA-KRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAY 251
SL+ + WA R + + Y + D + R FD L D M S++ S + +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLM---KSRNVEISIETF 189
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
+I+ +A A CF +++ G D ++ +I+ K ++ ++S++
Sbjct: 190 TILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD 249
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
+ D Y ++ ++G + A K+F+EMK I P+ +S ++D++ + G++
Sbjct: 250 -RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISR 308
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
A ++ +M G P+A + +L+ + KAG+ + L+++++MKK G P+ Y ++E
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
++ + L+ A+ + N M K ST++ + V+ A ++Y+ M A P
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEM 519
TY ++ + K D+ K+ EM
Sbjct: 429 NTVTYNILMRMFVGSKSTDMVLKMKKEM 456
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ Y L +A + + + + + M++ + S+F N + +Y+ K + A
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTF---NTIFRYIEKKRDVNGA 414
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+ K+ + + +T TYN L+ +F+ ++ + M+ + + +TY L++
Sbjct: 415 HRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTM 474
Query: 328 LAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM--RGFGL 384
G + A+KLF+EM +E+ + PS ++ ++ + +AG+L ++ +M +G
Sbjct: 475 FCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVA 534
Query: 385 RP 386
RP
Sbjct: 535 RP 536
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 7/290 (2%)
Query: 231 SLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALI 290
+L D MV++ + Y +I L K E A K++ + K YNA+I
Sbjct: 31 ALVDRMVEEGHQ-------PYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAII 83
Query: 291 TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
G + ++ M D TY MI S +SGR A +L ++M ER I
Sbjct: 84 DRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQIN 143
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
P FS+L++++ K G++ A +IY +M G+ P+ Y S+I+ + K +L+ A R+
Sbjct: 144 PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM 203
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
D M P+ ++ ++ K+ ++D M IF +M + G + TY+ L+
Sbjct: 204 LDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 263
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMK 520
G +D+A L N M ++G+ P T+ ++L L SKK + A IL +++
Sbjct: 264 VGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 144/305 (47%), Gaps = 10/305 (3%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESM--EAAQCSLDSSTYELMIPSLAKSGRL 334
+G + D T+ L+ +G ++ + + M E Q Y +I L K G
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ------PYGTIINGLCKMGDT 57
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
+ A L +M+E +I+ I+++++D + K G A ++ EM G+ P Y+ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I+S+ ++G+ A +L +M + P+ ++ ++ + K GK+ A I+ DM + G
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
PT TY+ +++ +++ A ++ +SM + P + T++ ++ K VD +
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 515 ILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES-C 572
I EM G + V+ + ++ + + G +D A L M SSG+ N + + S C
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Query: 573 MKNGL 577
K L
Sbjct: 298 SKKEL 302
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D T++ALI + +G ++ EIY M + TY MI K RL+ A ++
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
M ++ P FS+L++ KA R+D M+I+ EM G+ + Y +LI + +
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
G LD A L + M +G PNY + ++ S +L A +I D++K+
Sbjct: 265 GDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 123/305 (40%), Gaps = 40/305 (13%)
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M E RP F++L++ + GR+ A+ + M G +P Y ++I K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
++AL L +M++ + + +Y I++ K G A ++F +M G P TYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 464 LLEMHAAS-----------------------------------GQVDSAMKLYNSMTNAG 488
+++ S G+V A ++Y M G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLAL 547
+ P TY +++ + ++ A ++L M + S D V+ S ++ Y K VD +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
M GI N L + G ++A+ LL ++S + + + S+LA L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 608 VRCQE 612
+E
Sbjct: 297 CSKKE 301
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 206/433 (47%), Gaps = 21/433 (4%)
Query: 140 KPFMNVTAVAK----------IVEVVKRWKWGPELETHLDKL--QFL----PN-MTHILQ 182
+PF +V+ + K + +++ +E++LD +FL PN ++ +L+
Sbjct: 65 EPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLK 124
Query: 183 ALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSK 242
+ +I D + S + W+++Q Y N ECY+ L D L ++D D I+ + E+ +
Sbjct: 125 SDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFP 184
Query: 243 DGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKS 302
+S A N +I+ K +E ++K++ +G + TYN L+ ++ +
Sbjct: 185 MTVS---AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA 241
Query: 303 FEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDS 362
++E ME+ + D TY MI K+G+ A + ++M+ R + +++ +
Sbjct: 242 ERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
Query: 363 MGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN 422
+ + +Y EM G++ ++ +I K GKL+ +++ M + G +PN
Sbjct: 302 CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 423 YGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYN 482
+YT++++ AKSG ++ A+ + + M GF P TYS ++ +G+V+ A+ ++
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH 421
Query: 483 SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDG 541
+ GL Y++++ L VD A ++ EM G + D + L+ + K
Sbjct: 422 TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHR 481
Query: 542 SVDLALRWLRFMD 554
VD A+ + M+
Sbjct: 482 KVDEAIALFKRME 494
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 174/390 (44%), Gaps = 40/390 (10%)
Query: 196 LYKWAK-RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRV 254
L+ W K +++ P Y L + L + D+ + +F+ M K I + YN +
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVT---YNTM 263
Query: 255 IQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQC 314
I+ KA + + A + ++ G + D TY +I +Y+ M+
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323
Query: 315 SLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMK 374
+ + L+I L K G+L+ + +F+ M + +P+ I++ L+D K+G ++ A++
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 375 IYMEMRGFGLRP-----------------------------------SATMYASLIESYT 399
+ M G +P ++ Y+SLI+
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLPTP 458
KAG++D A RL++EM + G + Y ++++ K K+D A+++F M E+ G T
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503
Query: 459 STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLE 518
TY+ LL + + A+KL++ M + G+ P + + A+ T L V A KIL E
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Query: 519 MKAMGFSVDVSASDVLMVYIKDGSVDLALR 548
+ MG +D + D++ K G + A +
Sbjct: 564 LAPMGVILDAACEDMINTLCKAGRIKEACK 593
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 1/288 (0%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR 380
Y ++ LA + +D + E+K+ + ++L+ S GK G ++ + ++ +M+
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 381 GFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLD 440
G+ P+ Y L+ A +D+A R+++ M+ +P+ Y +++ K+G+
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 441 TAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL 500
AM DME G TY +++ A S + LY M G++ ++ ++
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 501 TLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIR 559
L + ++ + M G +V+ VL+ Y K GSV+ A+R L M G +
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 560 TNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
+ + KNG E A T ++ + Y+S++ L
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 2/277 (0%)
Query: 335 DVAFKLF-QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
D+A+ F K++ + + SLVD + A +D + E++ F + + +
Sbjct: 133 DIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANA 192
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
LI+S+ K G ++ L +W +MK+ G P Y ++ + +D+A +F ME
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
P TY+ +++ + +GQ AM+ M G TY ++ +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 514 KILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESC 572
+ EM G V A S V+ K+G ++ M G + N I L +
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 573 MKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
K+G E A LL ++ K D+V Y+ ++ L +
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 212 CYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCF 271
CY L DA + R D +LF M ++ D + Y ++ + K + E A +
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCD--QTVYTYTILLSGMFKEHRNEEALKLW 526
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
+ G + AL T G ++ +I + + LD++ E MI +L K+
Sbjct: 527 DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKA 585
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
GR+ A KL + ER I + +++++ K G+ D AMK+ G G
Sbjct: 586 GRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 205/443 (46%), Gaps = 17/443 (3%)
Query: 131 DHVMVGGLKKPFMNVTAVAKIVEVVKRW-KWG-PELETHLDKLQFLPNMTHILQALKIVN 188
D ++ L K F + + K V V++ K+G P++ + + M I A ++++
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLD 182
Query: 189 DIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSF 248
+ R + P+ Y ++ +L D + ++++ D+ + + +
Sbjct: 183 RM-----------RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT- 230
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
Y +I+ ++ A ++ G K D TYN +I +G+ ++FE+ +
Sbjct: 231 --YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
+E C D +Y +++ +L G+ + KL +M P+ +S L+ ++ + G+
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
++ AM + M+ GL P A Y LI ++ + G+LD A+ + M G P+ Y
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++ + K+GK D A+ IF + + G P S+Y+ + +SG A+ + M + G
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASD-VLMVYIKDGSVDLAL 547
+ P TY ++++ L + +VD A ++L++M++ F V + VL+ + K ++ A+
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 548 RWLRFMDSSGIRTNNFIIRQLFE 570
L M +G R N L E
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIE 551
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 149/332 (44%), Gaps = 1/332 (0%)
Query: 279 GKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAF 338
G+ D YNALI F + + + M + S D+ TY +MI SL G+LD+A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY 398
K+ ++ N +P+ ++ L+++ G +D A+K+ EM GL+P Y ++I
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 399 TKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTP 458
K G +D A + ++ G P+ Y +++ + GK + + M P
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 459 STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLE 518
TYS L+ G+++ AM L M GL P +Y ++ + +DVA + L
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 519 MKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGL 577
M + G D V+ + VL K+G D AL + G N+ +F + +G
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 578 YESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
A ++ +++ D + Y S+++ L R
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 156/356 (43%), Gaps = 1/356 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
AYN +I K +++ A +++ DT TYN +I ++G + ++ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ C TY ++I + G +D A KL EM R ++P +++++ M K G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
D A ++ + G P Y L+ + GK + +L +M PN Y+++
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + + GK++ AM++ M++ G P +Y L+ G++D A++ +M + G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALR 548
P + Y +L L D A +I ++ +G S + S+ + + + G AL
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ M S+GI + + + G+ + A LL + +V Y +L
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 343 EMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAG 402
E+ E+ +P +++L++ K R+D A ++ MR P Y +I S G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 403 KLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYS 462
KLD AL++ +++ +P YT+++E+ G +D A+ + ++M G P TY+
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 463 CLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAM 522
++ G VD A ++ ++ G P + +Y +L L ++ + K++ +M +
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 523 GFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
+V +L+ + +DG ++ A+ L+ M G+ + + L + + G + A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 582 KPLLETYVNSAAKVDLVLYTSILAHLVR 609
LET ++ D+V Y ++LA L +
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCK 415
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 169/345 (48%), Gaps = 6/345 (1%)
Query: 168 LDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFD 227
LD++ PN + L L + + + + + W K +S + Y + +L R F
Sbjct: 144 LDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQ 203
Query: 228 AIQSLFDEMVQDSSK-DGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
I+ + EMV+D + D I+ Y+ +I + A F+++ +G D TY
Sbjct: 204 LIEEMALEMVKDGVELDNIT----YSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTY 259
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
+A++ ++ G + +YE A D+ + ++ ++G D + QEMK
Sbjct: 260 SAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS 319
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+++P+ ++++L+++MG+AG+ A ++ EM GL P+ +L++ Y KA
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCLL 465
AL+LW+EMK + ++ LY ++ A G + A +FNDM E P +Y+ +L
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAML 439
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
++ + G+ + AM+L+ M AG++ + T ++ L K +D
Sbjct: 440 NIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRID 484
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 10/287 (3%)
Query: 330 KSGRLDVAFKLFQEMKERNIRPSFGI----FSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
KS R F+L +EM ++ + +S+++ + + A++ + M GL
Sbjct: 194 KSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLM 253
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P Y+++++ Y+K+GK++ L L++ G++P+ ++++ + ++G D +
Sbjct: 254 PDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYV 313
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+M+ P Y+ LLE +G+ A L+N M AGL P T TA++ +
Sbjct: 314 LQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGK 373
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKD-GSVDLALRWLRFM-DSSGIRTNNF 563
+ A ++ EMKA + +D + L+ D G + A R M +S R +NF
Sbjct: 374 ARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNF 433
Query: 564 IIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRC 610
+ G E A L E + + +V+++ T LV+C
Sbjct: 434 SYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTC----LVQC 476
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 159/372 (42%), Gaps = 37/372 (9%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQD 239
IL ++ LSLY+ A W P+ + +L ++ D+D I+ + EM
Sbjct: 262 ILDVYSKSGKVEEVLSLYERAVATGWK-PDAIAFSVLGKMFGEAGDYDGIRYVLQEM--- 317
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
S D + YN +++ + +A K LA F ++ +G + +T AL+ ++
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWA 377
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER-NIRPSFGIFSS 358
+ +++E M+A + +D Y ++ A G + A +LF +MKE RP +++
Sbjct: 378 RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTA 437
Query: 359 LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
+++ G G+ + AM+++ EM G++ + L++ KA ++D + ++D K G
Sbjct: 438 MLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG---------FLPTPSTY-------- 461
+P+ L ++ A + A + +E+A + + Y
Sbjct: 498 VKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFK 557
Query: 462 ---------------SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
+CL+++ + + + A +L T GL PG+ T L +
Sbjct: 558 LVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVR 617
Query: 507 KLVDVAAKILLE 518
L AA+ LE
Sbjct: 618 SLSVGAAETALE 629
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 199/427 (46%), Gaps = 11/427 (2%)
Query: 178 THILQALKIVNDIDASLSLYKWAKRQSWYVP-NEECYLLLFDALNQSRDFDAIQSLFDEM 236
+ +L A+ +N D +SL + Q+ +P N Y +L + + ++ +M
Sbjct: 85 SKLLSAIAKMNKFDVVISL--GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 142
Query: 237 VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALI-TLFLN 295
++ + I + + ++ ++++ A ++ +G + +T T+N LI LFL+
Sbjct: 143 MKLGYEPNIVTLSS---LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 296 KGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI 355
++ + + M A C D TY +++ L K G D+AF L +M++ + P I
Sbjct: 200 NKAS-EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
+++++D + K +D A+ ++ EM G+RP+ Y+SLI G+ A RL +M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
+ P+ ++ ++++ K GKL A ++++M K P+ TYS L+ ++D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 476 SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
A +++ M + P + TY ++ K V+ ++ EM G + ++L+
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 536 VYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAK 594
+ + G D+A + M S G+ N L + KNG E A + E S K
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS--K 496
Query: 595 VDLVLYT 601
++ +YT
Sbjct: 497 MEPTIYT 503
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 187/397 (47%), Gaps = 9/397 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ Y ++ + L + D D +L ++M Q + G+ YN +I L K + ++ A
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL---IYNTIIDGLCKYKHMDDA 275
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
FK+++ G + + TY++LI+ N G + + M + + D T+ +I +
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
K G+L A KL+ EM +R+I PS +SSL++ RLD A +++ M P
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y +LI+ + K +++ + ++ EM + G N Y ++++ ++G D A IF
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+M G P TY+ LL+ +G+++ AM ++ + + + P + TY ++ +
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
V+ + + G DV A + ++ + + GS + A + M G N+
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Query: 567 QLFESCMKNGLYESAKPLLET-----YVNSAAKVDLV 598
L + +++G E++ L++ + A+ + LV
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 3/301 (0%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ + L DA + + L+DEMV+ S I + Y+ +I ++L+ A
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT---YSSLINGFCMHDRLDEA 380
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F+ + D TYN LI F + E++ M ++ TY ++I
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L ++G D+A ++F+EM + P+ +++L+D + K G+L+ AM ++ ++ + P+
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y +IE KAGK++ L+ + G +P+ Y ++ + G + A ++F
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+M++ G LP Y+ L+ G +++ +L M + G ST + +L +
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Query: 508 L 508
L
Sbjct: 621 L 621
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 183/448 (40%), Gaps = 42/448 (9%)
Query: 218 DALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGS 277
+ L++ + DA+ +LF EMV+ I F ++++ +AK K ++ +++Q
Sbjct: 55 NGLSELKLDDAV-ALFGEMVKSRPFPSIIEF---SKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 278 GGKVDTQTYNALITLFLNKG-LPY----------------------------------KS 302
G + TY+ LI F + LP ++
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 303 FEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDS 362
+ + M ++ T+ +I L + A L M + +P + +V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 363 MGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN 422
+ K G D A + +M L P +Y ++I+ K +D AL L+ EM+ G RPN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 423 YGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYN 482
Y+ ++ G+ A + +DM + P T+S L++ G++ A KLY+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 483 SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDG 541
M + P + TY++++ +D A ++ M + DV + L+ + K
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 542 SVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYT 601
V+ + R M G+ N L + + G + A+ + + V+ +++ Y
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 602 SILAHLVRCQEEQNERHLMLILGATRHK 629
++L L C+ + E+ +++ R K
Sbjct: 471 TLLDGL--CKNGKLEKAMVVFEYLQRSK 496
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 158/338 (46%), Gaps = 6/338 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ Y +L D L + D + L D M K + + YN +I L KL+ A
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL---KGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+++ S + TY LI + + + + SME L+ Y ++I
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L K G+ + A L+++M E+ +P+ ++S LVD + + G+ + A +I M G P+
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
A Y+SL++ + K G + A+++W EM K G N Y+++++ G++ AM +++
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM---TNAGLRPGMSTYTAILTLLA 504
M G P YS +++ G +D+A+KLY+ M +P + TY +L L
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Query: 505 SKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGS 542
+K + A +L M G DV + + + + S
Sbjct: 552 MQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 182/411 (44%), Gaps = 21/411 (5%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSS-KDGISSFDAYNRVIQYLAKAEKLEL 266
PN + L+ AL + R D +F M + DG + Y ++ L K E+++
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT----YCTLMDGLCKEERIDE 240
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A ++Q G YN LI KG + ++ ++M C + TY +I
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY--MEMRGFGL 384
L G+LD A L + M P+ + +L++ + K R A+++ ME RG+ L
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
+ +Y+ LI K GK + A+ LW +M + G +PN +Y+++V+ + GK + A
Sbjct: 361 --NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA 504
I N M +G LP TYS L++ +G + A++++ M G Y+ ++ L
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 505 SKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFM-------DSS 556
V A + +M +G D V+ S ++ GS+D AL+ M
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 557 GIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
+ T N ++ L CM+ + A LL + ++ D++ + L L
Sbjct: 539 DVVTYNILLDGL---CMQKDI-SRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 205/490 (41%), Gaps = 69/490 (14%)
Query: 186 IVNDIDASLS--LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDS--- 240
+ N ++A +S ++K A + + + + ++ S DFD+++ L + ++
Sbjct: 51 VENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVI 110
Query: 241 -SKDGISSFDAYNRVIQYLAKAEKLELAFCCFKK-VQGSGGKVDTQTYNALITLFLNKGL 298
+ I F AY KA + A F + V K +++N+++ + +N+GL
Sbjct: 111 IERSFIVVFRAY-------GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGL 163
Query: 299 PYKSFEIYESMEAAQCSLDSS----TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
++ E Y+ + + +++ S ++ L+I +L K +D A ++F+ M ER P
Sbjct: 164 YHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+ +L+D + K R+D A+ + EM+ G PS +Y LI+ K G L +L D M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL---------- 464
G PN Y ++ GKLD A+S+ M + +P TY L
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 465 ----------------LEMHAAS---------GQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
L H S G+ + AM L+ M G +P + Y+ +
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGI 558
+ L + + A +IL M A G + + S ++ + K G + A++ + MD +G
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 559 RTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSI--------------- 603
N F L + G + A + + K D V Y+SI
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 604 LAHLVRCQEE 613
L H + CQEE
Sbjct: 524 LYHEMLCQEE 533
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 165/363 (45%), Gaps = 8/363 (2%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y V+ L K+ LA F+K++ K Y+ +I G + ++ M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
E D TY +I L G+ D K+ +EM RNI P FS+L+D K G+L
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A ++Y EM G+ P Y SLI+ + K L A +++D M G P+ Y+++
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ S K+ ++D M +F ++ G +P TY+ L+ SG++++A +L+ M + G+
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGS-VDLALR 548
P + TY +L L ++ A +I +M+ ++ + ++++ + + S VD A
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 549 WLRFMDSSGIR----TNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ G++ T N +I L C K L E+ + + D I
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGL---CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 605 AHL 607
AHL
Sbjct: 569 AHL 571
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 167/364 (45%), Gaps = 32/364 (8%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA---------------------- 250
Y ++ D+L + FD SLF+EM K + ++ +
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 251 ----------YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY 300
++ +I K KL A + ++ G DT TYN+LI F + +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV 360
++ ++++ M + C D TY ++I S K+ R+D +LF+E+ + + P+ +++LV
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 361 DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFR 420
++G+L+ A +++ EM G+ PS Y L++ G+L+ AL ++++M+K+
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 421 PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
G+Y +I+ + K+D A S+F + G P TY+ ++ G + A L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 481 YNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKD 540
+ M G P TY ++ + + +++ EMK GFS D S +++ + D
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Query: 541 GSVD 544
+D
Sbjct: 608 RRLD 611
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 151/338 (44%), Gaps = 11/338 (3%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G + D TY ++ G + +++ ME Y ++I SL K G D A
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
LF EM+ + I+ +SSL+ + G+ D K+ EM G + P +++LI+
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
+ K GKL A L++EM G P+ Y +++ K L A +F+ M G P
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY-TAILTLLASKKLVDVAAKIL 516
TYS L+ + + +VD M+L+ +++ GL P TY T +L S KL + A ++
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL-NAAKELF 443
Query: 517 LEMKAMGFSVDVSASDVLMVYIKD-GSVDLALRWLRFMDSS----GIRTNNFIIRQLFES 571
EM + G V +L+ + D G ++ AL M S GI N II + +
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 572 CMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ A L + + K D+V Y ++ L +
Sbjct: 504 ----SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 156/355 (43%), Gaps = 1/355 (0%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
+I + +KL AF + G + DT T++ L+ F +G ++ + + M +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
D T +I L GR+ A L M E +P + +++ + K+G A+
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
++ +M ++ S Y+ +I+S K G D AL L++EM+ G + + Y+ ++
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
GK D + +M +P T+S L+++ G++ A +LYN M G+ P
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 494 STYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRF 552
TY +++ + + A ++ M + G D+ +L+ Y K VD +R R
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 553 MDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
+ S G+ N L ++G +AK L + V+ +V Y +L L
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 5/303 (1%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMV-QDSSKDGISSFDAYNRVIQYLAKAEKLE 265
+P+ + L D + + L++EM+ + + D I+ YN +I K L
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT----YNSLIDGFCKENCLH 367
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
A F + G + D TY+ LI + ++ + + ++ TY ++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+SG+L+ A +LFQEM R + PS + L+D + G L+ A++I+ +M+ +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
+Y +I A K+D A L+ + G +P+ Y +++ K G L A +
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
F M++ G P TY+ L+ H + S+++L M G ST ++ +L+
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Query: 506 KKL 508
++L
Sbjct: 608 RRL 610
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 195/445 (43%), Gaps = 18/445 (4%)
Query: 149 AKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVP 208
AKI+E+++ P++ T+ + I AL +++ + S P
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS--------------P 202
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAF 268
+ Y + +L S + D M+Q +D Y +I+ + + A
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQ---RDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 269 CCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
+++ G D TYN L+ +G ++ + M ++ C + T+ +++ S+
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
+GR A KL +M + PS F+ L++ + + G L A+ I +M G +P++
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
Y L+ + K K+D A+ + M G P+ Y ++ + K GK++ A+ I N
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
+ G P TY+ +++ A +G+ A+KL + M L+P TY++++ L+ +
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 509 VDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQ 567
VD A K E + MG + V+ + +++ K D A+ +L FM + G + N
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 568 LFESCMKNGLYESAKPLLETYVNSA 592
L E G+ + A LL N
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKG 584
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 161/359 (44%), Gaps = 4/359 (1%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N ++ + + +LE F + + G D LI F G K+ +I E +E
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
+ D TY +MI K+G ++ A + M ++ P +++++ S+ +G+L
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
AM++ M P Y LIE+ + + A++L DEM+ G P+ Y ++V
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
K G+LD A+ NDM +G P T++ +L ++G+ A KL M G P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWL 550
+ T+ ++ L K L+ A IL +M G + +S + +L + K+ +D A+ +L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 551 RFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
M S G + + + K+G E A +L + L+ Y +++ L +
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 188/437 (43%), Gaps = 53/437 (12%)
Query: 132 HVMVGGLKKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDID 191
+VM+ G + + + V+ R P++ T+ L+ L + + QA+++++
Sbjct: 176 NVMISG----YCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD--- 228
Query: 192 ASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAY 251
+ +R + P+ Y +L +A + L DEM + + Y
Sbjct: 229 ------RMLQRDCY--PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT---Y 277
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGK-------------------VDTQ-------- 284
N ++ + K +L+ A + SG + +D +
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 285 --------TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
T+N LI KGL ++ +I E M C +S +Y ++ K ++D
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
A + + M R P +++++ ++ K G+++ A++I ++ G P Y ++I+
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
KAGK A++L DEM+ +P+ Y+ +V ++ GK+D A+ F++ E+ G P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 457 TPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
T++ ++ S Q D A+ M N G +P ++YT ++ LA + + A ++L
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 517 LEMKAMGFSVDVSASDV 533
E+ G SA V
Sbjct: 578 NELCNKGLMKKSSAEQV 594
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASL--IES------YTKAGKLDTALRLWDEMK 415
G+A + +T Y G G S +L +ES + G+L+ + + M
Sbjct: 70 GRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMV 129
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
G P+ T ++ + GK A I +E +G +P TY+ ++ + +G+++
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 476 SAMKLYNSMT--------NAGLR------------------------PGMSTYTAILTLL 503
+A+ + + M+ N LR P + TYT ++
Sbjct: 190 NALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNN 562
V A K+L EM+ G + DV +VL+ I K+G +D A+++L M SSG + N
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 563 FIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ S G + A+ LL + +V + ++ L R
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 181/377 (48%), Gaps = 5/377 (1%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQD 239
++ L DID +LSL K + Q P Y + DAL ++ + +LF EM
Sbjct: 227 VVNGLCKRGDIDLALSLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
+ + + YN +I+ L + A + + T++ALI F+ +G
Sbjct: 286 GIRPNVVT---YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
++ ++Y+ M D TY +I RLD A +F+ M ++ P+ +++L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 360 VDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
+ KA R+D M+++ EM GL + Y +LI + +A + D A ++ +M G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMK 479
P+ Y+++++ +GK++TA+ +F ++++ P TY+ ++E +G+V+
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 480 LYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYI 538
L+ S++ G++P + TYT +++ K L + A + EMK G D + L+ ++
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 539 KDGSVDLALRWLRFMDS 555
+DG + +R M S
Sbjct: 583 RDGDKAASAELIREMRS 599
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 151/333 (45%), Gaps = 1/333 (0%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G + D+ T+N LI ++ + + M C D TY +++ L K G +D+A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
L ++M++ I P I+++++D++ ++ A+ ++ EM G+RP+ Y SLI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
G+ A RL +M + PN ++ ++++ K GKL A ++++M K P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
TYS L+ ++D A ++ M + P + TY ++ K VD ++
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 518 EMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
EM G + V+ + ++ + + D A + M S G+ + L + NG
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 577 LYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
E+A + E S + D+ Y ++ + +
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 171/404 (42%), Gaps = 5/404 (1%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
Y P+ + L L + +L D MV + + + Y V+ L K ++
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT---YGIVVNGLCKRGDID 238
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
LA KK++ + YN +I N + ++ M+ + TY +I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L GR A +L +M ER I P+ FS+L+D+ K G+L A K+Y EM +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P Y+SLI + +LD A +++ M PN Y +++ K+ ++D M +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
F +M + G + TY+ L+ + + D+A ++ M + G+ P + TY+ +L L +
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFI 564
V+ A + ++ D+ ++++ + K G V+ + G++ N
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 565 IRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL-AHL 607
+ + GL E A L D Y +++ AHL
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 140/318 (44%), Gaps = 5/318 (1%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
DAS L +R+ PN + L DA + + L+DEM++ S I +
Sbjct: 309 DASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT--- 363
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
Y+ +I ++L+ A F+ + + TYN LI F + E++ M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
++ TY +I ++ D A +F++M + P +S L+D + G+++
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
TA+ ++ ++ + P Y +IE KAGK++ L+ + G +PN YT ++
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ G + A ++F +M++ G LP TY+ L+ H G ++ +L M +
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603
Query: 491 PGMSTYTAILTLLASKKL 508
ST + +L +L
Sbjct: 604 GDASTIGLVTNMLHDGRL 621
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 162/398 (40%), Gaps = 7/398 (1%)
Query: 220 LNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGG 279
LN + DA+ +LF +MV+ I F ++++ +AK K +L +++Q G
Sbjct: 57 LNDLKLDDAV-NLFGDMVKSRPFPSIVEF---SKLLSAIAKMNKFDLVISLGEQMQNLGI 112
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
+ TY+ LI F + + + M D T ++ R+ A
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
L +M E +P F++L+ + + R A+ + M G +P Y ++
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
K G +D AL L +M++ P +Y I+++ ++ A+++F +M+ G P
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL-TLLASKKLVDVAAKILLE 518
TY+ L+ G+ A +L + M + P + T++A++ + KLV+ A K+ E
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE-AEKLYDE 351
Query: 519 MKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGL 577
M D+ + S ++ + +D A M S N L + K
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 578 YESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQN 615
+ L + V YT+++ + +E N
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 157/352 (44%), Gaps = 8/352 (2%)
Query: 222 QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV 281
S F+ LF MV+ I F +++ +AK +K ++ +Q G
Sbjct: 49 HSLQFNEALDLFTHMVESRPLPSIIDF---TKLLNVIAKMKKFDVVINLCDHLQIMGVSH 105
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D T N L+ F PY + M D T+ +I R++ A +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+M E I+P ++++++DS+ K G ++ A+ ++ +M +G+RP MY SL+ +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
G+ A L M K +P+ + ++++ K GK A ++N+M + P TY
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+ L+ G VD A +++ M G P + YT+++ K VD A KI EM
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 522 MGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSG----IRTNNFIIRQL 568
G + + ++ + ++ + + G ++A M S G IRT N ++ L
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 203/478 (42%), Gaps = 23/478 (4%)
Query: 164 LETHLDKLQF---LPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDAL 220
L L LQF L TH++++ + + ID + L AK + + V C L +
Sbjct: 44 LRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL--QIM 101
Query: 221 NQSRDFDAIQSLFDEMVQDSSKDGISSFDA-------------YNRVIQYLAKAEKLELA 267
S D L + Q S SSF + +I ++E A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
++ G K D Y +I G + +++ ME D Y ++
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L SGR A L + M +R I+P F++L+D+ K G+ A ++Y EM + P+
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y SLI + G +D A +++ M+ G P+ YT ++ K K+D AM IF
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+M + G TY+ L++ G+ + A ++++ M + G+ P + TY +L L
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 508 LVDVAAKILLEMKAM---GFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNF 563
V A I +M+ G + ++ +VL+ + +G ++ AL M +
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 564 IIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLML 621
+ + K G ++A L + + K ++V YT++++ L R + ++E H++
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR-EGLKHEAHVLF 518
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 173/397 (43%), Gaps = 45/397 (11%)
Query: 170 KLQFLPNM---THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDF 226
KL F P++ T ++ + N ++ ++S+ P+ Y + D+L ++
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK-PDVVMYTTIIDSLCKNGHV 193
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
+ SLFD+M + + Y ++ L + + A + + K D T+
Sbjct: 194 NYALSLFDQMENYGIRPDVV---MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
NALI F+ +G + E+Y M + + TY +I G +D A ++F M+
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+ P ++SL++ K ++D AMKI+ EM GL + Y +LI+ + + GK +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA---GFLPTPSTYSC 463
A ++ M G PN Y +++ +GK+ A+ IF DM+K G P TY+
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 464 LL----------------------EMH-------------AASGQVDSAMKLYNSMTNAG 488
LL EM +G+V +A+ L+ S+ + G
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
++P + TYT +++ L + L A + +MK G S
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 127/284 (44%), Gaps = 16/284 (5%)
Query: 145 VTAVAKIVEVVKRWKW--GPELETHLDKLQFLPNM---THILQALKIVNDIDASLSLYKW 199
+T A I VK K+ EL + ++ PN+ T ++ + +D + ++
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 200 AKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLA 259
+ + + P+ Y L + + + D +F EM S K + Y +IQ
Sbjct: 308 METKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEM---SQKGLTGNTITYTTLIQGFG 363
Query: 260 KAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSS 319
+ K +A F + G + +TYN L+ G K+ I+E M+ + +D
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE--MDGV 421
Query: 320 -----TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMK 374
TY +++ L +G+L+ A +F++M++R + ++ ++ M KAG++ A+
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 375 IYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
++ + G++P+ Y ++I + G A L+ +MK+ G
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 94/220 (42%), Gaps = 1/220 (0%)
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
Y ++ + + + + AL L+ M ++ P+ +T ++ AK K D +++ + ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
G T + L+ S Q A M G P + T+T+++ ++
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 511 VAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLF 569
A ++ +M MG DV + ++ K+G V+ AL M++ GIR + + L
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 570 ESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+G + A LL K D++ + +++ V+
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 146/319 (45%), Gaps = 5/319 (1%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKL 264
Y PN Y + D L +S+ D L + M KDGI YN +I L + +
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRM----EKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 265 ELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELM 324
A + D T+NALI + +G ++ E YE M D TY L+
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
I L RLD A ++F M + P +S L++ K+ +++ MK++ EM G+
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
+ Y LI+ Y +AGKL+ A ++ M G PN Y +++ +GK++ A+
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA 504
I DM+K G TY+ ++ +G+V A +Y S+ GL P + TYT ++ L
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 505 SKKLVDVAAKILLEMKAMG 523
K L A + +MK G
Sbjct: 478 KKGLRREADALFRKMKEDG 496
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 170/375 (45%), Gaps = 5/375 (1%)
Query: 163 ELETHLDKLQFLPNMTHILQALKIVNDIDA-SLSLYKWAKRQSWYVPNEECYL-LLFDAL 220
+L H+ + + LP++ + L ++ + + +Y W + Q +P+ C +L +
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 221 NQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGK 280
+ S +M++ + I +F + ++ + +++ A F ++ G G K
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGS---LLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 281 VDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
+ YN +I + ++ ME D TY +I L SGR A ++
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
M +R I P F++L+D+ K GR+ A + Y EM L P Y+ LI
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
+LD A ++ M G P+ Y++++ KS K++ M +F +M + G + T
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 461 YSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMK 520
Y+ L++ + +G+++ A +++ M G+ P + TY +L L ++ A IL +M+
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 521 AMGFSVDVSASDVLM 535
G D+ ++++
Sbjct: 424 KNGMDADIVTYNIII 438
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 156/339 (46%), Gaps = 5/339 (1%)
Query: 224 RDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
R +DA+ +FD+MV K + YN +I L K+++++ A +++ G D
Sbjct: 166 RVYDALY-MFDQMVGMGYKPNVV---IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
TYN+LI+ + G + + M + D T+ +I + K GR+ A + ++E
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M R++ P +S L+ + RLD A +++ M G P Y+ LI Y K+ K
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
++ ++L+ EM + G N YT++++ ++GKL+ A IF M G P TY+
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
LL +G+++ A+ + M G+ + TY I+ + V A I + G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 524 FSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTN 561
D+ +M+ + K G A R M GI N
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 163/388 (42%), Gaps = 4/388 (1%)
Query: 226 FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQT 285
D LF MVQ I+ F +R++ ++K +K ++ ++++Q G + T
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADF---SRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCT 118
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
N L+ F + M T+ ++ + R+ A +F +M
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
+P+ I+++++D + K+ ++D A+ + M G+ P Y SLI +G+
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A R+ M K P+ + ++++ K G++ A + +M + P TYS L+
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
++D A +++ M + G P + TY+ ++ K V+ K+ EM G
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 526 VD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
+ V+ + ++ Y + G +++A R M G+ N L NG E A +
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 585 LETYVNSAAKVDLVLYTSILAHLVRCQE 612
L + D+V Y I+ + + E
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGE 446
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 119/292 (40%), Gaps = 34/292 (11%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
+ S Y M+ + + +LD + LF M + PS FS L+ ++ K + D + ++
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+M+ G+ + L+ + + +L AL +M K G P+ + ++ +
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
++ A+ +F+ M G+ P Y+ +++ S QVD+A+ L N M G+ P + TY
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSS 556
++++ L S G A R + M
Sbjct: 225 NSLISGLCSS----------------------------------GRWSDATRMVSCMTKR 250
Query: 557 GIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLV 608
I + F L ++C+K G A+ E + + D+V Y+ ++ L
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 179/402 (44%), Gaps = 13/402 (3%)
Query: 184 LKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKD 243
L+IVN +D++ S N+ + LL Q+R F + SK
Sbjct: 148 LEIVNSLDSTFSNCG---------SNDSVFDLLIRTYVQARKLREAHEAFTLL---RSKG 195
Query: 244 GISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSF 303
S DA N +I L + +ELA+ ++++ SG ++ T N ++ G K
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVG 255
Query: 304 EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSM 363
++ D TY +I + + G ++ AF+L M + P ++++++ +
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
K G+ + A +++ EM GL P +T Y SL+ K G + +++ +M+ P+
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
++ ++ +SG LD A+ FN +++AG +P Y+ L++ + G + AM L N
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 484 MTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGS 542
M G + TY IL L +K++ A K+ EM D +L+ + K G+
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 543 VDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
+ A+ + M IR + L + K G ++AK +
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 177/410 (43%), Gaps = 39/410 (9%)
Query: 238 QDSSKDGISSFDAY--NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLN 295
Q+ S+ G+ + Y N ++ L K K+E +VQ G D TYN LI+ + +
Sbjct: 224 QEISRSGVG-INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 296 KGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI 355
KGL ++FE+ +M S TY +I L K G+ + A ++F EM + P
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
+ SL+ K G + K++ +MR + P ++S++ +T++G LD AL ++ +K
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMS------------------------------- 444
+AG P+ +YT++++ + G + AM+
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 445 ----IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL 500
+FN+M + P T + L++ H G + +AM+L+ M +R + TY +L
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 501 TLLASKKLVDVAAKILLEMKAMG-FSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIR 559
+D A +I +M + +S S ++ G + A R M S I+
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 560 TNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
I + + ++G + LE ++ D + Y +++ VR
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 166/389 (42%), Gaps = 12/389 (3%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
+S P+ Y L + D + +F +M S+D + ++ ++ ++
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM---RSRDVVPDLVCFSSMMSLFTRSG 389
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
L+ A F V+ +G D Y LI + KG+ + + M C++D TY
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
++ L K L A KLF EM ER + P + L+D K G L AM+++ +M+
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 383 GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
+R Y +L++ + K G +DTA +W +M P Y+++V + G L A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 443 MSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTL 502
++++M PT + +++ + SG M + G P +Y ++
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 503 LASKKLVDVAAKIL--LEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIR 559
++ + A ++ +E + G DV + + +L + + + A LR M G+
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 560 TNNFIIRQLFESCMKNGLYESAKPLLETY 588
+ R + +CM NG + S L E +
Sbjct: 690 PD----RSTY-TCMING-FVSQDNLTEAF 712
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 145/363 (39%), Gaps = 40/363 (11%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
R VP+ C+ + +S + D F+ + + I Y +IQ +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL---IPDNVIYTILIQGYCRK 423
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
+ +A ++ G +D TYN ++ + + ++ +++ M DS T
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
++I K G L A +LFQ+MKE+ IR +++L+D GK G +DTA +I+ +M
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
+ P+ Y+ L+ + G L A R+WDEM +P + +++ +SG
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 442 AMSIFNDM-------------------------------------EKAGFLPTPSTYSCL 464
S M E+ G +P TY+ +
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI 663
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
L Q+ A + M G+ P STYT ++ S+ + A +I EM GF
Sbjct: 664 LHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Query: 525 SVD 527
S D
Sbjct: 724 SPD 726
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 106/281 (37%), Gaps = 52/281 (18%)
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
MI L +SGRL A M R+ I +SL + G D+ +
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDL-------- 170
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
LI +Y +A KL A + ++ GF + ++ S + G ++ A
Sbjct: 171 ----------LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
++ ++ ++G T + ++ G+++ + + G+ P + TY +++
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNF 563
+SK L++ A +++ M GFS G+ T N
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFS------------------------------PGVYTYNT 310
Query: 564 IIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+I L K+G YE AK + + S D Y S+L
Sbjct: 311 VINGL----CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y V+ + K+ + LA +K++ K+D Y+ +I G +F ++ M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
E D TY +I +GR D KL ++M +R I P+ FS L+DS K G+L
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A ++ EM G+ P+ Y SLI+ + K +L+ A+++ D M G P+ + ++
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ K+ ++D + +F +M G + TY+ L++ SG+++ A KL+ M + +
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV 528
RP + +Y +L L ++ A +I +++ +D+
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 181/406 (44%), Gaps = 6/406 (1%)
Query: 206 YVPNEECYLLLFDALN-QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKL 264
Y P+ + L + L + R +A++ L D MV+ K + + N ++ L K+
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALE-LVDRMVEMGHKPTLITL---NTLVNGLCLNGKV 209
Query: 265 ELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELM 324
A ++ +G + + TY ++ + G + E+ ME LD+ Y ++
Sbjct: 210 SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
I L K G LD AF LF EM+ + + +++L+ AGR D K+ +M +
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
P+ ++ LI+S+ K GKL A +L EM + G PN Y +++ K +L+ A+
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA 504
+ + M G P T++ L+ + + ++D ++L+ M+ G+ TY ++
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 505 SKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKD-GSVDLALRWLRFMDSSGIRTNNF 563
++VA K+ EM + D+ + +L+ + D G ++ AL ++ S + +
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 564 IIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
I + + A L + K+D Y +++ L R
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 140/295 (47%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
++ +I K KL A K++ G +T TYN+LI F + ++ ++ + M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ C D T+ ++I K+ R+D +LF+EM R + + +++LV ++G+L
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ A K++ EM +RP Y L++ G+L+ AL ++ +++K+ + G+Y +I
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + K+D A +F + G Y+ ++ + A L+ MT G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVD 544
P TY ++ AA+++ EMK+ GF DVS +++ + G +D
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELD 629
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 179/429 (41%), Gaps = 42/429 (9%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSG-------- 278
DA+ LF +M+Q + F NR+ +AK ++ EL K+++ G
Sbjct: 71 DAVD-LFRDMIQSRPLPTVIDF---NRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 279 --------------------GKV-------DTQTYNALITLFLNKGLPYKSFEIYESMEA 311
GK+ DT +N L+ + ++ E+ + M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
T ++ L +G++ A L M E +P+ + +++ M K+G+
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
AM++ +M ++ A Y+ +I+ K G LD A L++EM+ GF+ + Y ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
+G+ D + DM K P T+S L++ G++ A +L M G+ P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWL 550
TY +++ + ++ A +++ M + G D+ ++L+ Y K +D L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 551 RFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRC 610
R M G+ N L + ++G E AK L + V+ + D+V Y +L L C
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL--C 484
Query: 611 QEEQNERHL 619
+ E+ L
Sbjct: 485 DNGELEKAL 493
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 129/303 (42%), Gaps = 3/303 (0%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR 380
+ + ++AK+ + ++ L ++M+ + I S S +++ + +L A ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 381 GFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLD 440
G P ++ +L+ ++ AL L D M + G +P +V +GK+
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 441 TAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL 500
A+ + + M + GF P TY +L + SGQ AM+L M ++ Y+ I+
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 501 TLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIR 559
L +D A + EM+ GF D+ + L+ + G D + LR M I
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 560 TNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHL 619
N L +S +K G A LL+ + + + Y S++ C+E + E +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF--CKENRLEEAI 388
Query: 620 MLI 622
++
Sbjct: 389 QMV 391
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 182/399 (45%), Gaps = 12/399 (3%)
Query: 178 THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMV 237
T ++Q D+D +L + + N +++ + R DA+ + EM
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL-NFIQEM- 285
Query: 238 QDSSKDGISSFDAY--NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLN 295
S++DG D Y N ++ L KA ++ A + G D TYN++I+
Sbjct: 286 --SNQDGFFP-DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 296 KGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI 355
G ++ E+ + M CS ++ TY +I +L K +++ A +L + + + I P
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
F+SL+ + AM+++ EMR G P Y LI+S GKLD AL + +M+
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
+G + Y +++ K+ K A IF++ME G TY+ L++ S +V+
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 476 SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
A +L + M G +P TY ++LT + AA I+ M + G D+ L+
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 536 VYI-KDGSVDLALRWLRFMDSSGIRTN----NFIIRQLF 569
+ K G V++A + LR + GI N +I+ LF
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 179/421 (42%), Gaps = 5/421 (1%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
D LS+ W + P+ Y + + L ++ +M K +S+F
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTF-- 192
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
N +I+ L +A +L A + + G D +T+ ++ ++ +G + I E M
Sbjct: 193 -NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERN-IRPSFGIFSSLVDSMGKAGRL 369
CS + + +++ K GR++ A QEM ++ P F++LV+ + KAG +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A++I M G P Y S+I K G++ A+ + D+M PN Y +
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + K +++ A + + G LP T++ L++ + AM+L+ M + G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALR 548
P TY ++ L SK +D A +L +M+ G + V + L+ + K A
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLV 608
M+ G+ N+ L + K+ E A L++ + K D Y S+L H
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 609 R 609
R
Sbjct: 552 R 552
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 185/431 (42%), Gaps = 41/431 (9%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQD 239
+L +L+ D A+L L+ A ++ + P Y + L +S FD ++ + ++M
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 240 SSKDGISSFDAYNRVIQYLAKAE-KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGL 298
+ G S+F +I+ A+ E + E+ + G K DT YN ++ L +
Sbjct: 113 RCEMGTSTFLI---LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV---- 165
Query: 299 PYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSS 358
D ++ +L+ S AK M I+P F+
Sbjct: 166 ------------------DGNSLKLVEISHAK-------------MSVWGIKPDVSTFNV 194
Query: 359 LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
L+ ++ +A +L A+ + +M +GL P + ++++ Y + G LD ALR+ ++M + G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCLLEMHAASGQVDSA 477
+ +IV K G+++ A++ +M + GF P T++ L+ +G V A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 478 MKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMV 536
+++ + M G P + TY ++++ L V A ++L +M S + V+ + ++
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 537 YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVD 596
K+ V+ A R + S GI + L + + A L E + + D
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 597 LVLYTSILAHL 607
Y ++ L
Sbjct: 435 EFTYNMLIDSL 445
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 166/356 (46%), Gaps = 15/356 (4%)
Query: 232 LFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT 291
L D+MV+ + + Y V+ + K+ + LA +K++ K+D Y+ +I
Sbjct: 215 LIDKMVEYGCQPNAVT---YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 292 LFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP 351
G +F ++ ME + + TY ++I +GR D KL ++M +R I P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
+ FS L+DS K G+L A +++ EM G+ P Y SLI+ + K LD A ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
D M G PN + +++ K+ ++D + +F M G + TY+ L++
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSAS 531
G+++ A +L+ M + + P + TY +L L + A +I +++ +D+
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 532 DVLMVYIKDGS-VDLALRWLRFMD------SSGIRTNNFIIRQLFESCMKNGLYES 580
++++ + + S VD A W F G++T N +I L C K L E+
Sbjct: 512 NIIIHGMCNASKVDDA--WDLFCSLPLKGVKPGVKTYNIMIGGL---CKKGPLSEA 562
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 184/406 (45%), Gaps = 8/406 (1%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKV 274
LF A+ +++ +D + +L +M GI+ + + +I + KL LAF K+
Sbjct: 94 LFSAIAKTKQYDLVLALCKQM----ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKI 149
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
G + +T T++ LI +G ++ E+ + M D T ++ L SG+
Sbjct: 150 IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
A L +M E +P+ + +++ M K+G+ AM++ +M ++ A Y+ +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I+ K G LD A L++EM+ G N Y +++ +G+ D + DM K
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
P T+S L++ G++ A +L+ M + G+ P TYT+++ + +D A +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 515 ILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCM 573
++ M + G ++ ++L+ Y K +D L R M G+ + L +
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 574 KNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHL 619
+ G AK L + V+ ++V Y +L L C ++E+ L
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL--CDNGESEKAL 493
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G K D T N L+ G ++ + + M C ++ TY ++ + KSG+ +A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
+L ++M+ERNI+ +S ++D + K G LD A ++ EM G+ + Y LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
+ AG+ D +L +M K PN ++++++S K GKL A + +M G P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
TY+ L++ +D A ++ + M + G P + T+ ++ +D ++
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 518 EMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
+M G D V+ + ++ + + G +++A + M S + N + L + NG
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 577 LYESAKPLLETYVNSAAKVDLVLYTSIL 604
E A + E S ++D+ +Y I+
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIII 515
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 165/359 (45%), Gaps = 4/359 (1%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y ++ D L + D +LF+EM K ++ YN +I A + + +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
+ + T++ LI F+ +G ++ E+++ M + D+ TY +I K
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
LD A ++ M + P+ F+ L++ KA R+D ++++ +M G+ Y
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
+LI+ + + GKL+ A L+ EM PN Y ++++ +G+ + A+ IF +EK+
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
Y+ ++ + +VD A L+ S+ G++PG+ TY ++ L K + A
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 513 AKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFE 570
+ +M+ G + D ++L+ ++ DG +++ + + G + I+ + +
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 3/298 (1%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR 380
+ + ++AK+ + D+ L ++M+ + I + S +++ + +L A ++
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 381 GFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLD 440
G P+ +++LI G++ AL L D M + G +P+ +V SGK
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 441 TAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL 500
AM + + M + G P TY +L + SGQ AM+L M ++ Y+ I+
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 501 TLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIR 559
L +D A + EM+ G + ++ ++L+ + G D + LR M I
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 560 TNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNER 617
N L +S +K G A+ L + ++ D + YTS++ C+E ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF--CKENHLDK 386
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 122/303 (40%), Gaps = 18/303 (5%)
Query: 316 LDSSTYELMIPSLAKSGRLDVAF------------KLFQEMKERNIRPSFGIFSSLVDSM 363
L S + + P L ++G L +A + F +RN+ + S LVD
Sbjct: 9 LSSQVSKFVQPRLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERLRSGLVDI- 67
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
+ D A+ ++ +M P+ ++ L + K + D L L +M+ G N
Sbjct: 68 ----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNL 123
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
++++ + KL A S + K G+ P T+S L+ G+V A++L +
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 484 MTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGS 542
M G +P + T ++ L A ++ +M G + V+ VL V K G
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 543 VDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTS 602
LA+ LR M+ I+ + + + K+G ++A L +++ Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 603 ILA 605
++
Sbjct: 304 LIG 306
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 180/384 (46%), Gaps = 10/384 (2%)
Query: 157 RWKWGPELETHLDKLQFL-PNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLL 215
R WGP + + L+KL+ + P++ + + LK+ ND + + WA +Q Y + Y
Sbjct: 106 RNHWGPSVVSELNKLRRVTPSI--VAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNA 163
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
LN++ F A L + M S+ S + +I+ A + + ++K++
Sbjct: 164 FAYCLNRNGHFRAADQLPELM---DSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
G K YN ++ + G + +YE + +S+T+ +++ L K+GR++
Sbjct: 221 KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIE 280
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
++ Q M+E +P +++++ ++ G LD +++++ EMR ++P Y +L+
Sbjct: 281 EMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLV 340
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
K G+++ L+ EMK + +Y +++E GK+ +A +++ D+ +G++
Sbjct: 341 VGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYI 400
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
Y+ +++ + QVD A KL+ L P T + I+ + + +
Sbjct: 401 ADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNV 460
Query: 516 LLEMKAMGFSVDVSASDVLMVYIK 539
L + +G+ V SD L + K
Sbjct: 461 LERIGELGYPV----SDYLTQFFK 480
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 170/427 (39%), Gaps = 82/427 (19%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
R++ P+ Y + L + DA ++DEM +D K + AY ++ L K
Sbjct: 290 RENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM---AYGTLVVGLCKD 346
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
++E + F +++G +D + Y LI F+ G + ++E + + D Y
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIY 406
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI----------------FSSLVDSMGK 365
+I L ++D A+KLFQ E + P F FS++++ +G+
Sbjct: 407 NAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE 466
Query: 366 AG-------------------RLDTAMKIY--MEMRGFGLRPSATMYASLIESYTKAGKL 404
G + A+ ++ ++ +G G S ++Y L+E+ K G +
Sbjct: 467 LGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHG---SVSVYNILMEALYKMGDI 523
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
+L L+ EM+K GF P+ Y++ + + G + A S + + +P+ + Y L
Sbjct: 524 QKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSL 583
Query: 465 LEMHAASGQVDS------------------------------------AMKLYNSMTNAG 488
+ G++D+ MK+ + M G
Sbjct: 584 TKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEG 643
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD---VSASDVLMVYIKDGSVDL 545
+ Y AI++ ++ + VA ++ E+K + V ++L+ K + DL
Sbjct: 644 VFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADL 703
Query: 546 ALRWLRF 552
L ++F
Sbjct: 704 VLSGIKF 710
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 165/358 (46%), Gaps = 17/358 (4%)
Query: 264 LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYEL 323
L+LA + ++ +G ++ ++ + G K+F + M D+STY
Sbjct: 388 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 447
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
++ L + ++++AF LF+EMK + ++ +VDS KAG ++ A K + EMR G
Sbjct: 448 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 507
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
P+ Y +LI +Y KA K+ A L++ M G PN Y+ +++ + K+G+++ A
Sbjct: 508 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567
Query: 444 SIFNDM----------------EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
IF M + P TY LL+ S +V+ A KL ++M+
Sbjct: 568 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 627
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLA 546
G P Y A++ L +D A ++ EM GF + + S ++ Y K DLA
Sbjct: 628 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 687
Query: 547 LRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ L M + N I ++ + K G + A L++ + ++V YT+++
Sbjct: 688 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 745
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 168/367 (45%), Gaps = 23/367 (6%)
Query: 173 FLPNMT---HILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAI 229
F+P+ + +L L + ++ + L++ KR V + Y ++ D+ ++ +
Sbjct: 438 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL-VADVYTYTIMVDSFCKAGLIEQA 496
Query: 230 QSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNAL 289
+ F+EM + + ++ A +I KA+K+ A F+ + G + TY+AL
Sbjct: 497 RKWFNEMREVGCTPNVVTYTA---LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 553
Query: 290 ITLFLNKGLPYKSFEIYESMEAAQCSLDSS----------------TYELMIPSLAKSGR 333
I G K+ +I+E M ++ D TY ++ KS R
Sbjct: 554 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 613
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
++ A KL M P+ ++ +L+D + K G+LD A ++ EM G + Y+S
Sbjct: 614 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 673
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
LI+ Y K + D A ++ +M + PN +YT +++ K GK D A + ME+ G
Sbjct: 674 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 733
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
P TY+ +++ G++++ ++L M + G+ P TY ++ +DVA
Sbjct: 734 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 793
Query: 514 KILLEMK 520
+L EMK
Sbjct: 794 NLLEEMK 800
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 167/396 (42%), Gaps = 23/396 (5%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF------LNKGLPYKSFE 304
+N ++ + A+ KK+ G YN LI LN L + +
Sbjct: 334 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 393
Query: 305 IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMG 364
Y M AA L+ L +G+ + AF + +EM + P +S +++ +
Sbjct: 394 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 453
Query: 365 KAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
A +++ A ++ EM+ GL Y +++S+ KAG ++ A + ++EM++ G PN
Sbjct: 454 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 513
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
YT ++ + K+ K+ A +F M G LP TYS L++ H +GQV+ A +++ M
Sbjct: 514 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573
Query: 485 TNA----------------GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV 528
+ RP + TY A+L V+ A K+L M G +
Sbjct: 574 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 633
Query: 529 SASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLET 587
D L+ + K G +D A M G + L + K + A +L
Sbjct: 634 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 693
Query: 588 YVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLIL 623
+ ++ ++V+YT ++ L + + LM ++
Sbjct: 694 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 729
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 148/317 (46%), Gaps = 6/317 (1%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
+F+ + S+D + F + +S + + ++ A ++ K+ ++E A +
Sbjct: 569 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA---LLDGFCKSHRVEEARKLLDAMS 625
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
G + + Y+ALI G ++ E+ M TY +I K R D
Sbjct: 626 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 685
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
+A K+ +M E + P+ I++ ++D + K G+ D A K+ M G +P+ Y ++I
Sbjct: 686 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 745
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
+ + GK++T L L + M G PNY Y ++++ K+G LD A ++ +M++ +
Sbjct: 746 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 805
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
+ Y ++E + + ++ L + + P +S Y ++ L + +++A ++
Sbjct: 806 THTAGYRKVIE--GFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 863
Query: 516 LLEMKAMGFS-VDVSAS 531
L E+ + VD S++
Sbjct: 864 LEEVATFSATLVDYSST 880
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 165/400 (41%), Gaps = 59/400 (14%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGL------------ 298
Y ++I L +A E A +++ + + TY+ L+ LNK
Sbjct: 264 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 323
Query: 299 ---PYKSFEIYESMEAAQCSLDSSTYEL-MIPSLAKSGR--------------------- 333
Y S +I+ S+ A C+ +Y ++ + K G
Sbjct: 324 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 383
Query: 334 ----LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
LD+A K + EM + + SS + AG+ + A + EM G G P +
Sbjct: 384 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 443
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
Y+ ++ A K++ A L++EMK+ G + YT++V+S K+G ++ A FN+M
Sbjct: 444 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 503
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
+ G P TY+ L+ + + +V A +L+ +M + G P + TY+A++ V
Sbjct: 504 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 563
Query: 510 DVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLF 569
+ A +I + M S DV D+ + + D + R N L
Sbjct: 564 EKACQIF---ERMCGSKDVPDVDM---------------YFKQYDDNSERPNVVTYGALL 605
Query: 570 ESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ K+ E A+ LL+ + + ++Y +++ L +
Sbjct: 606 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 645
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 136/315 (43%), Gaps = 40/315 (12%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGI-SSFDAYNRVIQYLAKAEKLEL 266
PN+ Y L D L + D Q + EM S+ G ++ Y+ +I K ++ +L
Sbjct: 631 PNQIVYDALIDGLCKVGKLDEAQEVKTEM----SEHGFPATLYTYSSLIDRYFKVKRQDL 686
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A K+ + + Y +I G +++++ + ME C + TY MI
Sbjct: 687 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 746
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR------ 380
G+++ +L + M + + P++ + L+D K G LD A + EM+
Sbjct: 747 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 806
Query: 381 ----------GF--------GL---------RPSATMYASLIESYTKAGKLDTALRLWDE 413
GF GL P ++Y LI++ KA +L+ ALRL +E
Sbjct: 807 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 866
Query: 414 MK--KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
+ A Y ++ES + K++TA +F++M K G +P ++ L++ +
Sbjct: 867 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 926
Query: 472 GQVDSAMKLYNSMTN 486
++ A+ L + +++
Sbjct: 927 SKISEALLLLDFISH 941
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/518 (20%), Positives = 187/518 (36%), Gaps = 84/518 (16%)
Query: 129 VDDHVMVGGLKKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVN 188
V+ H +V + + ++ A+A V V +G + + L + + + + +++ L+++
Sbjct: 44 VNVHQVVPIITQSSIDARAIADAVSGVDDV-FGRKSQKFLRQFREKLSESLVIEVLRLIA 102
Query: 189 DIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSF 248
A +S + WA RQ Y Y L D + + D + + +E +Q D F
Sbjct: 103 RPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDD----EKVPEEFLQQIRDDDKEVF 158
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
+ V+ V N ++ L + K F S
Sbjct: 159 GEFLNVL-------------------------VRKHCRNGSFSIALEELGRLKDFRFRPS 193
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
STY +I + K+ RLD A + +EM N+R S+ K G+
Sbjct: 194 ---------RSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGK 244
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
A+ + +E F P Y LI +A + A+ + M+ PN Y+
Sbjct: 245 WREALTL-VETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 301
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++ +L + N M G P+P ++ L+ + SG A KL M G
Sbjct: 302 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 361
Query: 489 LRPGMSTYTAILTLLASKK------LVDVAAK---------------------------- 514
PG Y ++ + K L+D+A K
Sbjct: 362 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 421
Query: 515 -------ILLEMKAMGFSVDVSASDVLMVYIKDGS-VDLALRWLRFMDSSGIRTNNFIIR 566
++ EM GF D S ++ Y+ + S ++LA M G+ + +
Sbjct: 422 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 481
Query: 567 QLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ +S K GL E A+ ++V YT+++
Sbjct: 482 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 151/316 (47%), Gaps = 1/316 (0%)
Query: 306 YESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGK 365
Y + A L+ + +++ K G + A K+F E+ +R+++P+ F++L++ K
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 366 AGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL 425
G LD ++ +M RP Y++LI + K K+D A L+DEM K G PN +
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
+T ++ ++++G++D + M G P Y+ L+ +G + +A + + M
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 486 NAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVD 544
GLRP TYT ++ V+ A +I EM G +D V S ++ K+G V
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 545 LALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
A R LR M +GI+ ++ + ++ K G ++ LL+ + +V Y +L
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 605 AHLVRCQEEQNERHLM 620
L + + +N L+
Sbjct: 528 NGLCKLGQMKNADMLL 543
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 190/429 (44%), Gaps = 8/429 (1%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
I ++ ++ +++ + VP C LL D + + I + E++ + F
Sbjct: 186 IPDAIQCFRLSRKHRFDVPIRGCGNLL-DRMMKLNPTGTIWGFYMEILDAGFPLNVYVF- 243
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
N ++ K + A F ++ + ++N LI + G + F + M
Sbjct: 244 --NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
E ++ D TY +I +L K ++D A LF EM +R + P+ IF++L+ + G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
D + Y +M GL+P +Y +L+ + K G L A + D M + G RP+ YT +
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
++ + G ++TA+ I +M++ G +S L+ G+V A + M AG+
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALR 548
+P TYT ++ K K+L EM++ G V +VL+ + K G + A
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLV 608
L M + G+ ++ L E ++ S + + + + A DL Y SI+ L
Sbjct: 542 LLDAMLNIGVVPDDITYNTLLEGHHRHA-NSSKRYIQKPEIGIVA--DLASYKSIVNELD 598
Query: 609 RCQEEQNER 617
R ++ R
Sbjct: 599 RASKDHRNR 607
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 166/380 (43%), Gaps = 4/380 (1%)
Query: 231 SLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALI 290
+L D+MV+ + +F ++ L + K A +++ G + D TY A+I
Sbjct: 156 ALVDQMVEMGYQPDTVTF---TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 291 TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
+G P + + ME + D Y +I SL K +D A LF EM + IR
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
P +SSL+ + GR A ++ +M + P+ + SLI+++ K GKL A +L
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
+DEM + PN Y ++ +LD A IF M LP TY+ L+
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
+ +V M+L+ M+ GL TYT ++ D A + +M + G ++
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 531 SDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYV 589
+ L+ + K+G ++ A+ ++ S + + + + E K G E L +
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 590 NSAAKVDLVLYTSILAHLVR 609
K D++ Y ++++ +
Sbjct: 513 LKGVKPDVIAYNTMISGFCK 532
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 36/327 (11%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
Y+ VI L K ++ A F ++ G + D TY++LI+ N G + + M
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ + + T+ +I + AK G+L A KLF EM +R+I P+ ++SL++ RLD
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 371 TAMKIYMEM----------------RGF-------------------GLRPSATMYASLI 395
A +I+ M GF GL + Y +LI
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
+ +A D A ++ +M G PN Y +++ K+GKL+ AM +F ++K+
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
P TY+ + E +G+V+ L+ S++ G++P + Y +++ K L + A +
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 516 LLEMKAMGFSVDVSASDVLM-VYIKDG 541
++MK G D + L+ +++DG
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 131/301 (43%), Gaps = 3/301 (0%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN + L DA + + LFDEM+Q S I + YN +I ++L+ A
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT---YNSLINGFCMHDRLDEA 364
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F + D TYN LI F E++ M ++ TY +I
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
++ D A +F++M + P+ +++L+D + K G+L+ AM ++ ++ + P
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y + E KAGK++ L+ + G +P+ Y ++ K G + A ++F
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M++ G LP TY+ L+ H G ++ +L M + STY + +L +
Sbjct: 545 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
Query: 508 L 508
L
Sbjct: 605 L 605
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 3/274 (1%)
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+LD A LF EM + PS FS L+ ++ K + D + +M G+ + Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
+I + +L AL + +M K G+ P+ ++ ++ A+++ + M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G+ P T++ L+ + A+ L M G +P + TY A++ L + D+A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 513 AKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
+L +M+ DV S V+ K VD AL MD+ GIR + F L S
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI-S 283
Query: 572 CMKN-GLYESAKPLLETYVNSAAKVDLVLYTSIL 604
C+ N G + A LL + ++V + S++
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 205/488 (42%), Gaps = 60/488 (12%)
Query: 148 VAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSL--YKWAKRQSW 205
VA I +++++ W +L H+ + PN + + L I +++D L L Y W + S
Sbjct: 43 VAVIADLIEKQHW-SKLGVHVTDIN--PN--ELFRQL-ISSELDPDLCLRYYSWLVKNSD 96
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISS-FDA--------YNRVIQ 256
+ E L +L ++ + I+S D V++ S + S F A N +I
Sbjct: 97 ISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIA 156
Query: 257 YL-----AKAEKLELAFCCFKKVQGSGGKV------------------------------ 281
+ A + EL F FK+ G K+
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216
Query: 282 -----DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS---LAKSGR 333
+ T+N +I G K+ ++ E M+ CS + +Y +I L +G+
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
+ A + +EM E ++ P+ F+ L+D K L +MK++ EM ++P+ Y S
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
LI GK+ A+ + D+M AG +PN Y ++ K+ L A+ +F ++ G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
+PT Y+ L++ + G++D L M G+ P + TY ++ L ++ A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 514 KILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCM 573
K+ ++ + G V+ ++ Y + G A L+ M G++ + + +
Sbjct: 457 KLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 574 KNGLYESA 581
K G ++A
Sbjct: 517 KEGNLKAA 524
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 5/293 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN + +L D + + +F EM+ K + S YN +I L K+ A
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS---YNSLINGLCNGGKISEA 350
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
K+ +G + + TYNALI F + ++ +++ S++ + Y ++I +
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
K G++D F L +EM+ I P G ++ L+ + + G ++ A K++ ++ GL P
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PD 469
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+ L+E Y + G+ A L EM K G +P + Y ++++ K G L A ++
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRT 529
Query: 448 DMEKAGFLP-TPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
MEK L ++Y+ LL+ ++ G+++ A L N M GL P TY +
Sbjct: 530 QMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 6/282 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y L + L S+ D+MV + + + YN +I K + L+ A
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT---YNALINGFCKNDMLKEA 385
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F V+G G T+ YN LI + G F + E ME D TY +I
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L ++G ++ A KLF ++ + + P F L++ + G A + EM GL+P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAG-FRPNYGLYTLIVESNAKSGKLDTAMSIF 446
Y +++ Y K G L A + +M+K R N Y ++++ ++ GKL+ A +
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQV-DSAMKLYNSMTNA 487
N+M + G +P TY + E G V D L+N T +
Sbjct: 565 NEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 143/321 (44%), Gaps = 8/321 (2%)
Query: 208 PNEECYLLLFDA---LNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKL 264
PN Y L D L + ++ EMV++ +++F N +I K + L
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTF---NILIDGFWKDDNL 312
Query: 265 ELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELM 324
+ FK++ K + +YN+LI N G ++ + + M +A + TY +
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
I K+ L A +F +K + P+ +++ L+D+ K G++D + EM G+
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
P Y LI + G ++ A +L+D++ G P+ + +++E + G+ A
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA-GLRPGMSTYTAILTLL 503
+ +M K G P TY+ +++ + G + +A + M LR +++Y +L
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 504 ASKKLVDVAAKILLEMKAMGF 524
+ K ++ A +L EM G
Sbjct: 552 SQKGKLEDANMLLNEMLEKGL 572
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 186/460 (40%), Gaps = 78/460 (16%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQD 239
+++A VN+ID++LSL + + VPN Y L +L++ + L +EM
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGC-VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
+ + +N VI L C F ++ + ++ L +G
Sbjct: 282 GC---VPDAETFNDVI----------LGLCKFDRINEAA---------KMVNRMLIRGF- 318
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
+ D TY ++ L K GR+D A LF + +P IF++L
Sbjct: 319 ---------------APDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTL 359
Query: 360 VDSMGKAGRLDTAMKIYMEM-RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
+ GRLD A + +M +G+ P Y SLI Y K G + AL + +M+ G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAM 478
+PN YT++V+ K GK+D A ++ N+M G P ++CL+ ++ A+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 479 KLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI 538
+++ M G +P + T+ ++++ L VD E+K
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCE---VD-------EIKH----------------- 512
Query: 539 KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLV 598
AL LR M S G+ N L + ++ G + A+ L+ V + +D +
Sbjct: 513 -------ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 599 LYTSILAHLVRCQEEQNERHLMLILGATRHKAHKFMCGLF 638
Y S++ L R E R L + H C +
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 179/427 (41%), Gaps = 20/427 (4%)
Query: 162 PELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALN 221
P+ ET D + L I +A K+VN + + P++ Y L + L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRM-----------LIRGFAPDDITYGYLMNGLC 333
Query: 222 QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV 281
+ DA + LF + + +N +I +L+ A + S G V
Sbjct: 334 KIGRVDAAKDLFYRIPK-------PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 282 -DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
D TYN+LI + +GL + E+ M C + +Y +++ K G++D A+ +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
EM ++P+ F+ L+ + K R+ A++I+ EM G +P + SLI +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
++ AL L +M G N Y ++ + + G++ A + N+M G T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 461 YSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMK 520
Y+ L++ +G+VD A L+ M G P + ++ L +V+ A + EM
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 521 AMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYE 579
G + D+ + L+ + + G ++ L R + + GI + L K G
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 580 SAKPLLE 586
A LL+
Sbjct: 687 DACLLLD 693
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 160/371 (43%), Gaps = 9/371 (2%)
Query: 247 SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY 306
SFD Y +I L + + +++ G + +++ + G P ++ +
Sbjct: 110 SFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 169
Query: 307 ESMEAA-QCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGK 365
M C +Y +++ L VA +F +M R I P+ F ++ +
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229
Query: 366 AGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL 425
+D+A+ + +M G P++ +Y +LI S +K +++ AL+L +EM G P+
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
+ ++ K +++ A + N M GF P TY L+ G+VD+A L+ +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 486 NAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM-KAMGFSVDVSASDVLMV-YIKDGSV 543
+P + + ++ + +D A +L +M + G DV + L+ Y K+G V
Sbjct: 350 ----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 544 DLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSI 603
LAL L M + G + N + L + K G + A +L K + V + +
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 604 LAHLVRCQEEQ 614
++ C+E +
Sbjct: 466 ISAF--CKEHR 474
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 3/259 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN + L A + +F EM + K + +F N +I L + ++++ A
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF---NSLISGLCEVDEIKHA 513
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+ + G +T TYN LI FL +G ++ ++ M LD TY +I
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L ++G +D A LF++M PS + L++ + ++G ++ A++ EM G P
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+ SLI +AG+++ L ++ +++ G P+ + ++ K G + A + +
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Query: 448 DMEKAGFLPTPSTYSCLLE 466
+ + GF+P T+S LL+
Sbjct: 694 EGIEDGFVPNHRTWSILLQ 712
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 132/291 (45%), Gaps = 1/291 (0%)
Query: 235 EMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
E++ D G + +Y ++ K K++ A+ ++ G K +T +N LI+ F
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 294 LNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSF 353
+ ++ EI+ M C D T+ +I L + + A L ++M + +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 354 GIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDE 413
+++L+++ + G + A K+ EM G Y SLI+ +AG++D A L+++
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 414 MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQ 473
M + G P+ +++ +SG ++ A+ +M G P T++ L+ +G+
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 474 VDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
++ + ++ + G+ P T+ +++ L V A +L E GF
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 129/303 (42%), Gaps = 3/303 (0%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y +L D + D ++ +EM D K F N +I K ++ A
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF---NCLISAFCKEHRIPEA 478
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F+++ G K D T+N+LI+ + + M + ++ TY +I +
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+ G + A KL EM + ++SL+ + +AG +D A ++ +M G PS
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
LI ++G ++ A+ EM G P+ + ++ ++G+++ +++F
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
++ G P T++ L+ G V A L + G P T++ +L + ++
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Query: 508 LVD 510
+D
Sbjct: 719 TLD 721
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 6/261 (2%)
Query: 350 RPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALR 409
R SF ++ L+ +G G T ++ ++M+ G+ +++ S++ Y KAG R
Sbjct: 108 RHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTR 167
Query: 410 LWDEMKKA-GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMH 468
L EM+ P + Y +++E A ++F DM PT T+ +++
Sbjct: 168 LMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAF 227
Query: 469 AASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV 528
A ++DSA+ L MT G P Y ++ L+ V+ A ++L EM MG D
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 529 SA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLET 587
+DV++ K ++ A + + M G ++ L K G ++AK L
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY- 346
Query: 588 YVNSAAKVDLVLYTSILAHLV 608
K ++V++ +++ V
Sbjct: 347 ---RIPKPEIVIFNTLIHGFV 364
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 8/370 (2%)
Query: 163 ELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYK---WAKRQSWYVPNEECYLLLFDA 219
EL + L + IL+ L N + Y+ W+ Q + Y LL
Sbjct: 99 ELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKI 158
Query: 220 LNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGG 279
+ ++ A+ L DEMVQD +F N +I +A + A F K +
Sbjct: 159 FAECGEYKAMWRLVDEMVQDGFPTTARTF---NLLICSCGEAGLAKQAVVQFMKSKTFNY 215
Query: 280 KVDTQTYNALITLFLNKGLPYKSFE-IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAF 338
+ +YNA++ L YK E +Y+ M S D TY +++ + + G++D
Sbjct: 216 RPFKHSYNAILNSLLGVK-QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY 398
+LF EM P ++ L+ +GK + A+ M+ G+ PS Y +LI+
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 399 TKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTP 458
++AG L+ DEM KAG RP+ YT+++ SG+LD A +F +M G LP
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 459 STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLE 518
TY+ ++ +G+ A L M + G P Y+ +++ L + A K++ E
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 519 MKAMGFSVDV 528
M G V +
Sbjct: 455 MVKKGHYVHL 464
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 140/314 (44%), Gaps = 1/314 (0%)
Query: 319 STYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
++Y L++ A+ G ++L EM + + F+ L+ S G+AG A+ +M+
Sbjct: 150 NSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMK 209
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
+ F RP Y +++ S + ++ +M + GF P+ Y +++ +N + GK
Sbjct: 210 SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGK 269
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
+D +F++M + GF P TY+ LL + + +A+ N M G+ P + YT
Sbjct: 270 MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT 329
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSG 557
++ L+ ++ L EM G DV V++ Y+ G +D A R M G
Sbjct: 330 LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
Query: 558 IRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNER 617
N F + G + A LL+ + + V+Y++++++L + + R
Sbjct: 390 QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEAR 449
Query: 618 HLMLILGATRHKAH 631
++ + H H
Sbjct: 450 KVIREMVKKGHYVH 463
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 1/226 (0%)
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
R + Y L++ + + G+ RL DEM + GF + L++ S ++G A+
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
F + + P +Y+ +L Q +Y M G P + TY +L
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDL-ALRWLRFMDSSGIRTNN 562
+D ++ EM GFS D ++L+ + G+ L AL L M GI +
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 563 FIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLV 608
L + + G E+ K L+ V + + D+V YT ++ V
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYV 370
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 173/382 (45%), Gaps = 5/382 (1%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
DA+ +L D+MV+ + +F +I L K A ++ G + + TY
Sbjct: 97 DAV-ALVDQMVEMGYRPDTITF---TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 152
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
++ +G +F + MEAA+ D + +I SL K +D A LF+EM+
Sbjct: 153 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 212
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+ IRP+ +SSL+ + GR A ++ +M + P+ + +LI+++ K GK
Sbjct: 213 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 272
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
A +L D+M K P+ Y ++ +LD A +F M P TY+ L++
Sbjct: 273 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 332
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSV 526
S +V+ +L+ M++ GL TYT ++ L D A K+ +M + G
Sbjct: 333 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 392
Query: 527 DVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
D+ +L+ + +G ++ AL +M S I+ + +I + E K G + L
Sbjct: 393 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 452
Query: 586 ETYVNSAAKVDLVLYTSILAHL 607
+ K ++V Y ++++ L
Sbjct: 453 CSLSLKGVKPNVVTYNTMISGL 474
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 139/272 (51%), Gaps = 1/272 (0%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
T+NALI F+ +G ++ ++++ M D TY +I RLD A ++F+ M
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
++ P +++L+ K+ R++ +++ EM GL Y +LI+ G
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
D A +++ +M G P+ Y+++++ +GKL+ A+ +F+ M+K+ Y+ +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+E +G+VD L+ S++ G++P + TY +++ L SK+L+ A +L +MK G
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 495
Query: 525 SVDVSASDVLM-VYIKDGSVDLALRWLRFMDS 555
D + L+ +++DG + +R M S
Sbjct: 496 LPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 160/365 (43%), Gaps = 4/365 (1%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQD 239
I+ +L +D +L+L+K + + PN Y L L + L +M++
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIR-PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
+ +F+A +I K K A + D TYN+LI F
Sbjct: 249 KINPNLVTFNA---LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
K+ +++E M + C D TY +I KS R++ +LF+EM R + +++L
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365
Query: 360 VDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
+ + G D A K++ +M G+ P Y+ L++ GKL+ AL ++D M+K+
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMK 479
+ + +YT ++E K+GK+D +F + G P TY+ ++ + + A
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485
Query: 480 LYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIK 539
L M G P TY ++ +A+++ EM++ F D S ++ +
Sbjct: 486 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 545
Query: 540 DGSVD 544
DG +D
Sbjct: 546 DGRLD 550
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 3/281 (1%)
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM--EMRGFGL 384
S K +LD A LF M + PS F+ L+ ++ K + D + + + +M G
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
PS +SL+ Y ++ A+ L D+M + G+RP+ +T ++ K A++
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA 504
+ + M + G P TY ++ G +D A L N M A + + + I+ L
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195
Query: 505 SKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNF 563
+ VD A + EM+ G + V+ S ++ G A + L M I N
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255
Query: 564 IIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
L ++ +K G + A+ L + + + D+ Y S++
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS--IFNDMEKAGF 454
S+ K KLD A+ L+ M K+ P+ + ++ + AK K D +S + M K G+
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
P+ T S LL + ++ A+ L + M G RP T+T ++ L A
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 515 ILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCM 573
++ M G + V+ V+ K G +DLA L M+++ I + I + +S
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195
Query: 574 KNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
K + A L + + ++V Y+S+++ L
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 229
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 197/414 (47%), Gaps = 6/414 (1%)
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAF 268
N + L +A ++ R D + ++M++ D I F NR + L + L A
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLE---LDVIPFFPYVNRTLSALVQRNSLTEAK 218
Query: 269 CCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
+ ++ G D T L+ L + P ++ E+ DS Y L + +
Sbjct: 219 ELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQAC 278
Query: 329 AKSGRLDVAFKLFQEMKERNI-RPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
K+ L +A L +EMKE+ + PS ++S++ + K G +D A+++ EM G+ +
Sbjct: 279 CKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMN 338
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
SLI + K L +AL L+D+M+K G PN +++++E K+G+++ A+ +
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
ME G P+ +++ + + A+KL++ GL + IL+ L +
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQG 457
Query: 508 LVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
D A ++L +M++ G +V S ++V++ + + ++DLA + G++ NN+
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 567 QLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLM 620
L + C +N ++A ++ +S +V+ V+Y +I+ L + + R L+
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 123/252 (48%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+YN +I K +++ A ++++ G+G + TY +L+ ++ E+ + M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ LD Y +I K ++ A LF E+ E + PS I++SL+ G +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A+ +Y +M GLR Y +LI+ K G L A L+ EM+ G P+ +YT+I
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
V +K G+ + +F +M+K P Y+ ++ H G +D A +L++ M + G+
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 490 RPGMSTYTAILT 501
P +T+ +++
Sbjct: 826 LPDGATFDILVS 837
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+YN V+ + + ++LA F + G K + TY+ LI + E+ M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGR 368
++ ++ Y+ +I L K G+ A +L M +E+ + S ++S++D K G
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
+D+A+ Y EM G G+ P+ Y SL+ K ++D AL + DEMK G + + Y
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
+++ K +++A ++F+++ + G P+ Y+ L+ G + +A+ LY M G
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALR 548
LR + TYT ++ L +KDG++ LA
Sbjct: 720 LRCDLGTYTTLIDGL----------------------------------LKDGNLILASE 745
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
M + G+ + I + K G + + E + ++++Y +++A
Sbjct: 746 LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 802
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 149/330 (45%), Gaps = 6/330 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSK-DGISSFDAYNRVIQYLAKAEKLEL 266
PN Y +L D ++ D + + M + + +G+ Y +I L K +
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV----VYQTIINGLCKVGQTSK 566
Query: 267 AFCCFKK-VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
A ++ V +YN++I F +G + YE M S + TY ++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L K+ R+D A ++ EMK + ++ + +L+D K +++A ++ E+ GL
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
PS +Y SLI + G + AL L+ +M K G R + G YT +++ K G L A +
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+ +M+ G +P Y+ ++ + GQ +K++ M + P + Y A++
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
+ +D A ++ EM G D + D+L+
Sbjct: 807 EGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 194/476 (40%), Gaps = 43/476 (9%)
Query: 167 HLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDF 226
LD + F P + L AL N + + LY N LL+ +L + +
Sbjct: 191 ELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPA 250
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQ-T 285
+A++ L + + + D + Y+ +Q K L +A ++++ V +Q T
Sbjct: 251 EALEVLSRAIERGAEPDSL----LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQET 306
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
Y ++I + +G + + + M + S++ +I K+ L A LF +M+
Sbjct: 307 YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA---- 401
+ P+ FS L++ K G ++ A++ Y +M GL PS ++I+ + K
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 402 ------------------------------GKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
GK D A L +M+ G PN Y ++
Sbjct: 427 EALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
+ + +D A +F+++ + G P TYS L++ + +A+++ N MT++ +
Sbjct: 487 GHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV 546
Query: 492 GMSTYTAILTLLASKKLVDVAAKIL---LEMKAMGFSVDVSASDVLMVYIKDGSVDLALR 548
Y I+ L A ++L +E K + S +S + ++ + K+G +D A+
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC-MSYNSIIDGFFKEGEMDSAVA 605
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
M +GI N L KN + A + + N K+D+ Y +++
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 178/406 (43%), Gaps = 4/406 (0%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ Y +L AL D +LFDEM+ K + + Y +I L + K+E A
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT---YTVLIDGLCRDGKIEEA 355
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+K+ TYNALI + G +FE+ ME C + T+ ++
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L + G+ A L + M + + P ++ L+D + + G ++TA K+ M F + P
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+ ++I ++ K GK D A M + G + T +++ K GK A+ I
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILE 535
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+ K L TP + + +L+M + +V + + + GL P + TYT ++ L
Sbjct: 536 TLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMVYIKD-GSVDLALRWLRFMDSSGIRTNNFIIR 566
+ + +IL MK G +V +++ + G V+ A + L M SG+ N+
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 567 QLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQE 612
+ + + NG + A + V +++ +Y+S+L V Q+
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 158/342 (46%), Gaps = 4/342 (1%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYK-SFEIYESM 309
Y ++ L K E A K+ G +D+ +L+ F +GL + + ++++ M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFC-RGLNLRDALKVFDVM 256
Query: 310 -EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
+ C+ +S +Y ++I L + GRL+ AF L +M E+ +PS ++ L+ ++ G
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
+D A ++ EM G +P+ Y LI+ + GK++ A + +M K P+ Y
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++ K G++ A + MEK P T++ L+E G+ A+ L M + G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLAL 547
L P + +Y ++ L + ++ A K+L M D ++ + ++ + K G D+A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYV 589
+L M GI + L + K G A +LET V
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 13/335 (3%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
++ +Y+ LI G ++F + + M C + TY ++I +L G +D AF LF
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
EM R +P+ ++ L+D + + G+++ A + +M + PS Y +LI Y K
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
G++ A L M+K +PN + ++E + GK A+ + M G P +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+ L++ G +++A KL +SM + P T+TAI+ + DVA+ L M
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 522 MGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTN----NFIIRQLFESC-MKN 575
G S+D V+ + ++ K G AL L + I T N I+ L + C +K
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 576 GLYESAKPLLETYVNSAAKV-DLVLYTSILAHLVR 609
L K +N V +V YT+++ L+R
Sbjct: 565 ELAMLGK------INKLGLVPSVVTYTTLVDGLIR 593
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 165/390 (42%), Gaps = 39/390 (10%)
Query: 254 VIQYLAKAEK--LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
+I+ ++ EK L+L +C + + G +++ Y++L+ L + ++ Y MEA
Sbjct: 129 LIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188
Query: 312 AQCSLDSSTYELMIPSLAKSG-----------------------------------RLDV 336
+ Y ++ +L K+G L
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248
Query: 337 AFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
A K+F M KE P+ +S L+ + + GRL+ A + +M G +PS Y LI
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
++ G +D A L+DEM G +PN YT++++ + GK++ A + M K
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
P+ TY+ L+ + G+V A +L M +P + T+ ++ L A +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 516 LLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMK 574
L M G S D+ + +VL+ + ++G ++ A + L M+ I + + + K
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 575 NGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
G + A L + +D V T+++
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 3/283 (1%)
Query: 341 FQEMKER-NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
F E++E R ++ +SSL+ S+ K A Y M G Y +++ +
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK-AGFLPTP 458
K G + A ++ K GF + + T ++ + L A+ +F+ M K P
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 459 STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLE 518
+YS L+ G+++ A L + M G +P TYT ++ L + L+D A + E
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 519 MKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGL 577
M G +V VL+ + +DG ++ A R M I + L K+G
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 578 YESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLM 620
A LL A K ++ + ++ L R + HL+
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 173/382 (45%), Gaps = 5/382 (1%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
DA+ +L D+MV+ + +F +I L K A ++ G + + TY
Sbjct: 173 DAV-ALVDQMVEMGYRPDTITF---TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
++ +G + + MEAA+ D + +I SL K +D A LF+EM+
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+ IRP+ +SSL+ + GR A ++ +M + P+ + +LI+++ K GK
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
A +L+D+M K P+ Y +V +LD A +F M P TY+ L++
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSV 526
S +V+ +L+ M++ GL TYT ++ L D A K+ +M + G
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 527 DVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
D+ +L+ + +G ++ AL +M S I+ + +I + E K G + L
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 586 ETYVNSAAKVDLVLYTSILAHL 607
+ K ++V Y ++++ L
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGL 550
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 161/365 (44%), Gaps = 4/365 (1%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQD 239
I+ +L +D +L+L+K + + PN Y L L + L +M++
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIR-PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
+ +F+A +I K K A + + D TYN+L+ F
Sbjct: 325 KINPNLVTFNA---LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
K+ +++E M + C D TY +I KS R++ +LF+EM R + +++L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 360 VDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
+ + G D A K++ +M G+ P Y+ L++ GKL+ AL ++D M+K+
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMK 479
+ + +YT ++E K+GK+D +F + G P TY+ ++ + + A
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 480 LYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIK 539
L M G P TY ++ +A+++ EM++ F D S ++ +
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 621
Query: 540 DGSVD 544
DG +D
Sbjct: 622 DGRLD 626
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 139/272 (51%), Gaps = 1/272 (0%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
T+NALI F+ +G ++ ++Y+ M D TY ++ RLD A ++F+ M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
++ P +++L+ K+ R++ +++ EM GL Y +LI+ G
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
D A +++ +M G P+ Y+++++ +GKL+ A+ +F+ M+K+ Y+ +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+E +G+VD L+ S++ G++P + TY +++ L SK+L+ A +L +MK G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 525 SVDVSASDVLM-VYIKDGSVDLALRWLRFMDS 555
+ + L+ +++DG + +R M S
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 141/319 (44%), Gaps = 9/319 (2%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
TY ++I + ++ +A L +M + PS SSL++ R+ A+ + +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
G RP + +LI K A+ L D M + G +PN Y ++V K G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
D A+++ N ME A ++ +++ VD A+ L+ M G+RP + TY+++
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGI 558
++ L S A+++L +M + ++ + L+ ++K+G A + M I
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 559 RTNNFIIRQLFES-CMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNER 617
+ F L CM + L + AK + E V+ D+V Y +++ + + ++
Sbjct: 362 DPDIFTYNSLVNGFCMHDRL-DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 618 HLMLILGATRHKAHKFMCG 636
L R +H+ + G
Sbjct: 421 ELF------REMSHRGLVG 433
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 122/278 (43%), Gaps = 1/278 (0%)
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+LD A LF M + PS F+ L+ ++ K + D + + +M+ + Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
LI + + ++ AL L +M K G+ P+ + ++ ++ A+++ + M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G+ P T++ L+ + A+ L + M G +P + TY ++ L + D+A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 513 AKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
+L +M+A DV + ++ + K VD AL + M++ GIR N L
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 572 CMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
G + A LL + +LV + +++ V+
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 172/371 (46%), Gaps = 46/371 (12%)
Query: 222 QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV 281
++R DA+ SL D+MV+ K I AYN +I L K +++ AF FK+++ G +
Sbjct: 168 RNRVSDAV-SLVDKMVEIGYKPDIV---AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP 223
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
+ TY AL+ N + + M + + + TY ++ + K+G++ A +LF
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 342 QEMKERNIRPSFGIFSSLVDSM-----------------------------------GKA 366
+EM +I P +SSL++ + KA
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
R++ MK++ EM GL + Y +LI+ + +AG +D A + +M G P+ Y
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
+++ +G+L+ A+ IF DM+K TY+ ++ +G+V+ A L+ S++
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLA 546
GL+P + TYT +++ L +K L+ + +MK G + + DG + L+
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT-------LSDGDITLS 516
Query: 547 LRWLRFMDSSG 557
++ M S G
Sbjct: 517 AELIKKMLSCG 527
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 170/384 (44%), Gaps = 5/384 (1%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
DAI LF +MV+ I F NR++ + K +K ++ KK++ G + D T+
Sbjct: 68 DAID-LFSDMVKSRPFPSIVDF---NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
N +I F + I M D T ++ + R+ A L +M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+P +++++DS+ K R++ A + E+ G+RP+ Y +L+ + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
A RL +M K PN Y+ ++++ K+GK+ A +F +M + P TYS L+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF-S 525
++D A ++++ M + G + +Y ++ K V+ K+ EM G S
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 526 VDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
V+ + ++ + + G VD A + MD GI + + L NG E A +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 586 ETYVNSAAKVDLVLYTSILAHLVR 609
E +D+V YT+++ + +
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCK 447
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 177/393 (45%), Gaps = 4/393 (1%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
L A+ + + +D + SL +M ++ + +F N VI ++ LA K+
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF---NIVINCFCCCFQVSLALSILGKML 147
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
G + D T +L+ F + + + + M D Y +I SL K+ R++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
AF F+E++ + IRP+ +++LV+ + + R A ++ +M + P+ Y++L+
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
+++ K GK+ A L++EM + P+ Y+ ++ ++D A +F+ M G L
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
+Y+ L+ + +V+ MKL+ M+ GL TY ++ VD A +
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 516 LLEMKAMGFSVDVSASDVLMVYIKD-GSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMK 574
+M G S D+ ++L+ + D G ++ AL M + + + K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 575 NGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
G E A L + K D+V YT++++ L
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 162/363 (44%), Gaps = 19/363 (5%)
Query: 131 DHVMVGGLKKPFMNVTAVAKIVEVVKRW---KWGPELETHLDKLQFLPNMTHILQALKIV 187
D V +G L F V+ V +V + + P++ + I+ +L
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY----------NAIIDSLCKT 203
Query: 188 NDIDASLSLYKWAKRQSWYVPNEECYLLLFDAL-NQSRDFDAIQSLFDEMVQDSSKDGIS 246
++ + +K +R+ PN Y L + L N SR DA + L D + + + + I+
Sbjct: 204 KRVNDAFDFFKEIERKGIR-PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 247 SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY 306
Y+ ++ K K+ A F+++ D TY++LI ++ +++
Sbjct: 263 ----YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
+ M + C D +Y +I K+ R++ KLF+EM +R + + +++L+ +A
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
G +D A + + +M FG+ P Y L+ G+L+ AL ++++M+K + Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
T ++ K+GK++ A S+F + G P TY+ ++ G + LY M
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 487 AGL 489
GL
Sbjct: 499 EGL 501
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 135/292 (46%), Gaps = 9/292 (3%)
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+L+ A LF +M + PS F+ L+ ++ K + D + + +M G+R +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
+I + ++ AL + +M K G+ P+ +V + ++ A+S+ + M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G+ P Y+ +++ + +V+ A + + G+RP + TYTA++ L + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 513 AKILLEMKAMGFSVDV-SASDVLMVYIKDGSV----DLALRWLRFMDSSGIRTNNFIIRQ 567
A++L +M + +V + S +L ++K+G V +L +R I T + +I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 568 LFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHL 619
L C+ + + E A + + V+ D+V Y +++ + + ++ L
Sbjct: 305 L---CLHDRIDE-ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 151/309 (48%), Gaps = 2/309 (0%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN +I L K + ++ AF F K++ G K D TYN LI+ N G + + M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRL 369
+ D + +I + K G+L A KL+ EM K ++ P +++L+ K R+
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ M+++ EM GL + Y +LI + +A D A ++ +M G P+ Y ++
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
++ +G ++TA+ +F M+K TY+ ++E +G+V+ L+ S++ G+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALR 548
+P + TYT +++ K L + A + +EMK G + + L+ ++DG +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 549 WLRFMDSSG 557
++ M S G
Sbjct: 553 LIKEMRSCG 561
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 157/360 (43%), Gaps = 2/360 (0%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N ++ ++ A ++ G + DT T+ L+ ++ + E M
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
C D TY +I L K G D+A L +M++ I I+++++D + K +D
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
A ++ +M G++P Y LI G+ A RL +M + P+ + +++
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 432 SNAKSGKLDTAMSIFNDMEKAGF-LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ K GKL A ++++M K+ P Y+ L++ +V+ M+++ M+ GL
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRW 549
TYT ++ + D A + +M + G D+ ++L+ + +G+V+ AL
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+M ++ + + E+ K G E L + K ++V YT++++ R
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 159/389 (40%), Gaps = 7/389 (1%)
Query: 222 QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV 281
Q D LF +MV+ I F ++++ +AK K +L +++Q G
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEF---SKLLSAIAKMNKFDLVISLGEQMQNLGISH 108
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
+ TY+ I F + + I M T ++ R+ A L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+M E +P F++LV + + + A+ + M G +P Y ++I K
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
G+ D AL L ++M+K + +Y I++ K +D A +FN ME G P TY
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL-TLLASKKLVDVAAKILLEM- 519
+ L+ G+ A +L + M + P + + A++ + KLV+ A K+ EM
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE-AEKLYDEMV 347
Query: 520 KAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLY 578
K+ DV A + L+ + K V+ + R M G+ N L +
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 579 ESAKPLLETYVNSAAKVDLVLYTSILAHL 607
++A+ + + V+ D++ Y +L L
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 37/293 (12%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
L DA + + L+DEMV+ SK AYN +I+ FC +K+V+
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVK--SKHCFPDVVAYNTLIK----------GFCKYKRVE 373
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
+ E++ M ++ TY +I ++ D
Sbjct: 374 -------------------------EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
A +F++M + P ++ L+D + G ++TA+ ++ M+ ++ Y ++I
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
E+ KAGK++ L+ + G +PN YT ++ + G + A ++F +M++ G L
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
P TY+ L+ G ++ +L M + G ST+ + +L +L
Sbjct: 529 PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRL 581
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 39/240 (16%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
Q V N Y L Q+RD D Q +F +MV D
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD----------------------- 420
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
G D TYN L+ N G + ++E M+ LD TY
Sbjct: 421 ---------------GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
MI +L K+G+++ + LF + + ++P+ +++++ + G + A +++EM+
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 383 GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
G P++ Y +LI + + G + L EM+ GF + + L V + G+LD +
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGL-VTNMLHDGRLDKS 584
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 169/358 (47%), Gaps = 7/358 (1%)
Query: 170 KLQFLPNM---THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDF 226
KL F P++ T +L N I+ +++L+ + PN Y L L ++R
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHL 204
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
+ LF++M + S+ + + YN ++ L + + A + + + + T+
Sbjct: 205 NHAVELFNQMGTNGSRPNVVT---YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
ALI F+ G ++ E+Y M D TY +I L G LD A ++F M+
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
P+ I+++L+ K+ R++ MKI+ EM G+ + Y LI+ Y G+ D
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
A ++++M P+ Y ++++ +GK++ A+ IF M K TY+ +++
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
G+V+ A L+ S+ + G++P + TYT +++ + L+ A + +MK GF
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 148/326 (45%), Gaps = 1/326 (0%)
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
++E A F ++ G G K + TY LI + E++ M + TY
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
++ L + GR A L ++M +R I P+ F++L+D+ K G+L A ++Y M
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
+ P Y SLI G LD A +++ M++ G PN +YT ++ KS +++
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
M IF +M + G + TY+ L++ + G+ D A +++N M++ P + TY +L
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 502 LLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRT 560
L V+ A I M+ ++ V+ + ++ K G V+ A + S G++
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 561 NNFIIRQLFESCMKNGLYESAKPLLE 586
N + + GL A L +
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFK 492
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 159/389 (40%), Gaps = 12/389 (3%)
Query: 226 FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQT 285
F+ LF MV I F R++ +AK + ++ F+++Q G T
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDF---TRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
N ++ P ++ M D T+ ++ R++ A LF ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
+P+ +++L+ + K L+ A++++ +M G RP+ Y +L+ + G+
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A L +M K PN +T ++++ K GKL A ++N M + P TY L+
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
G +D A +++ M G P YT ++ K V+ KI EM G
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 526 VDVSASDVLMV-YIKDGSVDLALRWLRFMDSS----GIRTNNFIIRQLFESCMKNGLYES 580
+ VL+ Y G D+A M S IRT N ++ L C NG E
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL--CC--NGKVEK 416
Query: 581 AKPLLETYVNSAAKVDLVLYTSILAHLVR 609
A + E +++V YT I+ + +
Sbjct: 417 ALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 1/287 (0%)
Query: 319 STYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
S+Y ++ + + + + A LF M PS F+ L+ + K R D + ++ +
Sbjct: 49 SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
M+ G+ P ++ + + A +M K GF P+ +T ++ +
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
++ A+++F+ + GF P TY+ L+ + ++ A++L+N M G RP + TY A
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSG 557
++T L AA +L +M +V L+ ++K G + A M
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 558 IRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ + F L GL + A+ + + + V+YT+++
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 1/208 (0%)
Query: 403 KLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYS 462
+ + AL L+ M + P+ +T ++ AK + D +S+F M+ G P T +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 463 CLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAM 522
++ S Q A M G P + T+T++L ++ A + ++ M
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 523 GFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
GF + V+ + ++ K+ ++ A+ M ++G R N L + G + A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 582 KPLLETYVNSAAKVDLVLYTSILAHLVR 609
LL + + +++ +T+++ V+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVK 270
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 209/500 (41%), Gaps = 32/500 (6%)
Query: 129 VDDHV-MVGGLKK--PFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALK 185
VDD V + G + K PF ++ K++ V + ++K + + ++ +Q L
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK----------MNKFELVISLGEQMQTLG 113
Query: 186 IVNDI--------------DASLSLYKWAKRQSW-YVPNEECYLLLFDALNQSRDFDAIQ 230
I +D+ SL+L AK Y P+ L + S+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 231 SLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALI 290
+L D+MV+ K +F +I L K A ++ G + D TY ++
Sbjct: 174 ALVDQMVEMGYKPDTFTFTT---LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 291 TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
+G + + + ME + D Y +I L K +D A LF EM + IR
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
P +SSL+ + GR A ++ +M + P+ +++LI+++ K GKL A +L
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
+DEM K P+ Y+ ++ +LD A +F M P TYS L++
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
+ +V+ M+L+ M+ GL TYT ++ + D A + +M ++G ++
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 531 SDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYV 589
++L+ + K+G + A+ ++ S + + + + E K G E L
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 590 NSAAKVDLVLYTSILAHLVR 609
+++ Y ++++ R
Sbjct: 531 LKGVSPNVIAYNTMISGFCR 550
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 176/380 (46%), Gaps = 4/380 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ Y + + L + D D SL +M + + + YN +I L K + ++ A
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV---IYNTIIDGLCKYKHMDDA 277
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F ++ G + D TY++LI+ N G + + M + + + T+ +I +
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
K G+L A KL+ EM +R+I P +SSL++ RLD A ++ M P+
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y++LI+ + KA +++ + L+ EM + G N YT ++ ++ D A +F
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M G P TY+ LL+ +G++ AM ++ + + + P + TY ++ +
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
V+ ++ + G S +V A + ++ + + GS + A L+ M G N+
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 567 QLFESCMKNGLYESAKPLLE 586
L + +++G E++ L++
Sbjct: 578 TLIRARLRDGDREASAELIK 597
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 162/355 (45%), Gaps = 5/355 (1%)
Query: 223 SRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVD 282
+R DA+ +L D+MV+ K +F +I L K A ++ G + D
Sbjct: 767 NRISDAV-ALVDQMVEMGYKPDTVTFTT---LIHGLFLHNKASEAVALIDRMVQRGCQPD 822
Query: 283 TQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQ 342
TY A++ +G + + MEAA+ + Y +I SL K D A LF
Sbjct: 823 LVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 882
Query: 343 EMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAG 402
EM+ + +RP+ +SSL+ + GR A ++ +M + P+ +++LI+++ K G
Sbjct: 883 EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG 942
Query: 403 KLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYS 462
KL A +L++EM K PN Y+ ++ +L A + M + LP TY+
Sbjct: 943 KLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 1002
Query: 463 CLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAM 522
L+ + +VD M+L+ M+ GL TYT ++ + D A + +M ++
Sbjct: 1003 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 1062
Query: 523 GFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
G ++ ++L+ + K+G + A+ ++ S + + + + E K G
Sbjct: 1063 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 1117
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 132/305 (43%), Gaps = 5/305 (1%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
DAS L +R+ PN + L DA + + L+DEM++ S I +
Sbjct: 311 DASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT--- 365
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
Y+ +I ++L+ A F+ + + TY+ LI F + E++ M
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
++ TY +I ++ D A +F++M + P+ ++ L+D + K G+L
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
AM ++ ++ + P Y +IE KAGK++ L+ + G PN Y ++
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ G + A S+ M++ G LP TY+ L+ G +++ +L M + G
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Query: 491 PGMST 495
ST
Sbjct: 606 GDAST 610
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 164/414 (39%), Gaps = 11/414 (2%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
Q V N Y L Q+RD D Q +F +MV I + YN ++ L K
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT---YNILLDGLCKNG 482
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
KL A F+ +Q S + D TYN +I G +E++ ++ S + Y
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
MI + G + A L ++MKE P+ G +++L+ + + G + + ++ EMR
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Query: 383 GLRPSATM------YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
G A+ + IE + + + +Y Y ++ +
Sbjct: 603 GFAGDASTIGLSSKFKREIEKPNRENACKNIIFSEEICSSESCGESYD-YREVLRTGLSD 661
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
+LD A+ +F M ++ P+ +S LL A + D + M G+ + TY
Sbjct: 662 IELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 721
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDS 555
++ + +A +L +M +G+ D V+ + +L + + A+ + M
Sbjct: 722 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 781
Query: 556 SGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
G + + L + A L++ V + DLV Y +++ L +
Sbjct: 782 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 835
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 123/318 (38%), Gaps = 37/318 (11%)
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
E ME S + TY ++I + RL +A L +M + P +SL++
Sbjct: 707 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 766
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
R+ A+ + +M G +P + +LI K A+ L D M + G +P+ Y
Sbjct: 767 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 826
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
+V K G D A+++ N ME A YS +++ D A+ L+ M N
Sbjct: 827 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 886
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLA 546
G+RP + TY+++++ L + G A
Sbjct: 887 KGVRPNVITYSSLISCLCNY----------------------------------GRWSDA 912
Query: 547 LRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL-- 604
R L M I N L ++ +K G A+ L E + + ++ Y+S++
Sbjct: 913 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 972
Query: 605 -AHLVRCQEEQNERHLML 621
L R E + LM+
Sbjct: 973 FCMLDRLGEAKQMLELMI 990
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
K+D A+ +F DM K+ P+ ++ LL A + + + L M G+ + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSS 556
+ + + +A +L +M +G+ D V+ S +L Y + A+ + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 557 GIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
G + + F L + A L++ V + DLV Y +++ L +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 141/276 (51%), Gaps = 4/276 (1%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNK-GLPYKSFEIYES 308
A+N ++ L K++ + A F+ ++ D++TY+ L+ + + LP K+ E++
Sbjct: 169 AFNGLLSALCKSKNVRKAQEVFENMRDRFTP-DSKTYSILLEGWGKEPNLP-KAREVFRE 226
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M A C D TY +M+ L K+GR+D A + + M +P+ I+S LV + G R
Sbjct: 227 MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENR 286
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
L+ A+ ++EM G++ ++ SLI ++ KA ++ R+ EMK G PN +
Sbjct: 287 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 346
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
I+ + G+ D A +F M K P TY+ +++M ++++A K++ M G
Sbjct: 347 ILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 405
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ P M T++ ++ L ++ A +L EM MG
Sbjct: 406 VFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 441
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 138/304 (45%), Gaps = 5/304 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN + L AL +S++ Q +F+ M + D Y+ +++ K L A
Sbjct: 165 PNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDS----KTYSILLEGWGKEPNLPKA 220
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F+++ +G D TY+ ++ + G ++ I SM+ + C + Y +++ +
Sbjct: 221 REVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHT 280
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
RL+ A F EM+ ++ +F+SL+ + KA R+ ++ EM+ G+ P+
Sbjct: 281 YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 340
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+ ++ + G+ D A ++ +M K P+ YT++++ + +++TA ++
Sbjct: 341 SKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWK 399
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M K G P+ T+S L+ A L M G+RP T+ + LL ++
Sbjct: 400 YMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 459
Query: 508 LVDV 511
DV
Sbjct: 460 REDV 463
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 122/239 (51%), Gaps = 2/239 (0%)
Query: 316 LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI 375
L+ T+ +++ A++ ++D A F M++ ++ P+ F+ L+ ++ K+ + A ++
Sbjct: 130 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 189
Query: 376 YMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
+ MR P + Y+ L+E + K L A ++ EM AG P+ Y+++V+ K
Sbjct: 190 FENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 248
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
+G++D A+ I M+ + PT YS L+ + +++ A+ + M +G++ ++
Sbjct: 249 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 308
Query: 496 YTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVY-IKDGSVDLALRWLRFM 553
+ +++ + ++L EMK+ G + + + ++++ + I+ G D A R M
Sbjct: 309 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 367
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 110/253 (43%), Gaps = 15/253 (5%)
Query: 162 PELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALN 221
P++ T+ + L + +AL IV +D S+ P Y +L
Sbjct: 234 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC-----------KPTTFIYSVLVHTYG 282
Query: 222 QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV 281
+ F EM + K ++ F N +I KA +++ + K+++ G
Sbjct: 283 TENRLEEAVDTFLEMERSGMKADVAVF---NSLIGAFCKANRMKNVYRVLKEMKSKGVTP 339
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
++++ N ++ + +G ++F+++ M C D+ TY ++I + ++ A K++
Sbjct: 340 NSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVW 398
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+ M+++ + PS FS L++ + + A + EM G+RPS + L + K
Sbjct: 399 KYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKE 458
Query: 402 GKLDTALRLWDEM 414
+ D L ++M
Sbjct: 459 EREDVLKFLNEKM 471
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 167/366 (45%), Gaps = 42/366 (11%)
Query: 193 SLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYN 252
+LS++KWA+ Q + Y L ++L + + F I SL D+M + S + +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDM----KAKKLLSKETFA 166
Query: 253 RVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF---LNKGLPYKSF------ 303
+ + A+A K++ A F K++ G K+++ +N ++ N G K F
Sbjct: 167 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 226
Query: 304 --------------------------EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
E+ M+ D Y ++I + K+ + + A
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
+ F EM++RN +PS IF SL++ +G +L+ A++ + + G A Y +L+ +
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
Y + +++ A + DEM+ G PN Y +I+ + + A ++ M PT
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PT 403
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
STY ++ M ++D A+K+++ M G+ PGM +++++T L + +D A +
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 463
Query: 518 EMKAMG 523
EM +G
Sbjct: 464 EMLDVG 469
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 148/308 (48%), Gaps = 17/308 (5%)
Query: 144 NVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQ 203
NV K+ + +K+ ++ P+++++ L+ ++L+ V++++ + +
Sbjct: 212 NVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLR----VDEVNREM-------KD 260
Query: 204 SWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEK 263
+ P+ Y ++ +A +++ ++ F+EM Q + K F + +I L +K
Sbjct: 261 EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS---LINGLGSEKK 317
Query: 264 LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYEL 323
L A F++ + SG ++ TYNAL+ + +++ + M ++ TY++
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
++ L + R A++++Q M + P+ + +V RLD A+KI+ EM+G G
Sbjct: 378 ILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 434
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
+ P M++SLI + KLD A ++EM G RP +++ + ++ G+ D
Sbjct: 435 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVT 494
Query: 444 SIFNDMEK 451
+ M++
Sbjct: 495 DLVVKMDR 502
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 126/283 (44%), Gaps = 6/283 (2%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
++ + P+ + Y +L + Q + + + EM + + + AY +I KA
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVV---AYGIIINAHCKA 280
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
+K E A F +++ K + +LI ++ + E +E +++ L++ TY
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
++ + S R++ A+K EM+ + + P+ + ++ + + R A ++Y M
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM-- 398
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
P+ + Y ++ + +LD A+++WDEMK G P +++ ++ + KLD
Sbjct: 399 -SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
A FN+M G P +S L + G+ D L M
Sbjct: 458 ACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 174/366 (47%), Gaps = 20/366 (5%)
Query: 154 VVKR-WKWGPELETHLDKLQFLPNM----THILQALKIVNDIDASLSLYK--WA----KR 202
V+KR W GP+ L FL N H + + DI A L L+ W+ R
Sbjct: 62 VLKRLWNHGPKA---LQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR 118
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
P+ + + ++ + + D LF M + ++SF N ++ L K++
Sbjct: 119 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASF---NTILDVLCKSK 175
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLF-LNKGLPYKSFEIYESMEAAQCSLDSSTY 321
++E A+ F+ ++G VDT TYN ++ + L K P K+ E+ + M + + +TY
Sbjct: 176 RVEKAYELFRALRGRFS-VDTVTYNVILNGWCLIKRTP-KALEVLKEMVERGINPNLTTY 233
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
M+ ++G++ A++ F EMK+R+ ++++V G AG + A ++ EM
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
G+ PS Y ++I+ K ++ A+ +++EM + G+ PN Y +++ +G+
Sbjct: 294 EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSR 353
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
+ ME G P TY+ ++ ++ +V+ A+ L+ M + P + TY +++
Sbjct: 354 GEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Query: 502 LLASKK 507
+ +K
Sbjct: 414 GMFVRK 419
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 146/316 (46%), Gaps = 11/316 (3%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
V + A A K + A F + G D ++N ++ + K++E++ ++ +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG-R 190
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
S+D+ TY +++ R A ++ +EM ER I P+ +++++ +AG++ A
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
+ ++EM+ Y +++ + AG++ A ++DEM + G P+ Y +++
Sbjct: 251 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL 310
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
K ++ A+ +F +M + G+ P +TY+ L+ +G+ +L M N G P
Sbjct: 311 CKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF 370
Query: 494 STYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM--VYIKDGSVDL------ 545
TY ++ + V+ A + +M + ++ ++L+ ++++ S D+
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQ 430
Query: 546 --ALRWLRFMDSSGIR 559
A LR SG R
Sbjct: 431 AFAKEILRLQSKSGSR 446
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
+ L ++ A+ T S+ + M P+P T++ + E +A++G+ D A+KL+ +M
Sbjct: 94 FDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMH 153
Query: 486 NAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM---VYIKDGS 542
G ++++ IL +L K V+ A ++ ++ FSVD +V++ IK
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIK--R 210
Query: 543 VDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTS 602
AL L+ M GI N + + + G A ++D+V YT+
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 603 IL 604
++
Sbjct: 271 VV 272
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 164/385 (42%), Gaps = 4/385 (1%)
Query: 226 FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQT 285
FD SLF EM+Q I S + RV+ +AK K ++ + K++ G D +
Sbjct: 589 FDDAFSLFCEMLQSRP---IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 645
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
+ LI F + + M T ++ + R A L M
Sbjct: 646 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 705
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
P+ I++++++ + K L+ A++++ M G+R A Y +LI + +G+
Sbjct: 706 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 765
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A RL +M K PN +T ++++ K G L A +++ +M + +P TY+ L+
Sbjct: 766 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 825
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
G + A +++ M + G P + TY ++T K V+ K+ EM G
Sbjct: 826 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 885
Query: 526 VDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
D + L+ Y + G +++A + M G+ + L + NG E A +
Sbjct: 886 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 945
Query: 585 LETYVNSAAKVDLVLYTSILAHLVR 609
+E S VD++ Y I+ L R
Sbjct: 946 VEDLQKSEMDVDIITYNIIIQGLCR 970
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 166/366 (45%), Gaps = 11/366 (3%)
Query: 258 LAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT-LFLNKGLPYKSFEIYESMEAAQCSL 316
+ + + A + G G + YN +I L N+ L + E++ ME
Sbjct: 688 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN-NALEVFYCMEKKGIRA 746
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D+ TY +I L+ SGR A +L ++M +R I P+ F++L+D+ K G L A +Y
Sbjct: 747 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 806
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
EM + P+ Y SLI + G L A ++D M G P+ Y ++ KS
Sbjct: 807 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 866
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
+++ M +F +M G + TY+ L+ + +G+++ A K++N M + G+ P + TY
Sbjct: 867 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 926
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDS 555
+L L + ++ A ++ +++ VD+ ++++ + + + A R +
Sbjct: 927 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 986
Query: 556 SGIRTNNFIIRQLFESCMKNGLYESAKPLL-----ETYVNSAAKVDLVL---YTSILAHL 607
G++ + + + GL A L + ++ S D L YTS+ A L
Sbjct: 987 KGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAEL 1046
Query: 608 VRCQEE 613
++ E
Sbjct: 1047 IKAAHE 1052
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 137/310 (44%), Gaps = 1/310 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
YN +I L K +L +A +++ G D TYN L+T G + + M
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ D T+ +I K G LD A +L++EM + ++ P+ ++S+++ + GRL
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A K + M G P+ Y +LI + K +D ++L+ M GF + Y +
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + GKL A+ IF M P T+ LL +G+++SA+ ++ M +
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALR 548
G+ Y ++ L V+ A ++ + G D ++++ + K+G A
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Query: 549 WLRFMDSSGI 558
+R M GI
Sbjct: 478 LIRRMKEEGI 487
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 164/367 (44%), Gaps = 9/367 (2%)
Query: 170 KLQFLPNMT---HILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDF 226
KL + P++ +L +VN I + SL + S Y PN Y L D L ++ +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK-SGYEPNVVVYNTLIDGLCKNGEL 192
Query: 227 DAIQSLFDEMVQDSSKDGISS-FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQT 285
+ L +EM K G+ + YN ++ L + + A + + D T
Sbjct: 193 NIALELLNEM----EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
+ ALI +F+ +G ++ E+Y+ M + ++ TY +I L GRL A K F M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
+ P+ +++L+ K +D MK++ M G Y +LI Y + GKL
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
AL ++ M P+ + +++ +G++++A+ F+DM ++ Y+ ++
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
+ +V+ A +L+ + G++P TYT ++ L A +++ MK G
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Query: 526 VDVSASD 532
++A D
Sbjct: 489 CQMNAED 495
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 166/397 (41%), Gaps = 6/397 (1%)
Query: 222 QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV 281
S F+ +LF EMV I F R++ A + E +K++ G
Sbjct: 48 HSIRFEDAFALFFEMVHSQPLPSIVDF---TRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D ++ LI F + + M T+ ++ R+ AF L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
M + P+ ++++L+D + K G L+ A+++ EM GL Y +L+ +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
G+ A R+ +M K P+ +T +++ K G LD A ++ +M ++ P TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+ ++ G++ A K ++ M + G P + TY +++ ++VD K+ M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 522 MGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYES 580
GF+ D+ + L+ Y + G + +AL +M S + + L NG ES
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 581 AKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNER 617
A + S + +V Y ++ L C+ ++ E+
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGL--CKADKVEK 439
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 138/332 (41%), Gaps = 5/332 (1%)
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
G+ + + L T FL+ +F ++ M +Q + ++ + A R +
Sbjct: 29 GAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYE 88
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
Q+M+ I F+ L+ + RL A+ + +M G PS + SL+
Sbjct: 89 TVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLL 148
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
+ ++ A L M K+G+ PN +Y +++ K+G+L+ A+ + N+MEK G
Sbjct: 149 HGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
TY+ LL SG+ A ++ M + P + T+TA++ + + +D A ++
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 516 LLEMKAMGFSVD---VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESC 572
EM + SVD V+ + ++ G + A + M S G N L
Sbjct: 269 YKEM--IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 573 MKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
K + + L + D+ Y +++
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 132/295 (44%), Gaps = 3/295 (1%)
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+ D AF LF EM + PS F+ ++ + K + D + +Y +M G+ +
Sbjct: 588 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 647
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
LI + + +L AL L +M K GFRP+ ++ + + A+S+ + M+
Sbjct: 648 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 707
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
GF+P Y+ ++ + +++A++++ M G+R TY +++ L++ A
Sbjct: 708 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 767
Query: 513 AKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
A++L +M +V L+ ++K+G++ A + M + N F L
Sbjct: 768 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 827
Query: 572 CMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLILGAT 626
+G AK + + V+ D+V Y +++ C+ ++ E + L T
Sbjct: 828 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF--CKSKRVEDGMKLFCEMT 880
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 5/283 (1%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
DA+ L KR P+ + L D + + D Q L+ EM+Q S +
Sbjct: 229 DAARMLRDMMKRS--INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT--- 283
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN +I L +L A F + G + TYN LI+ F + + ++++ M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ D TY +I + G+L VA +F M R + P L+ + G ++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
+A+ + +MR Y +I KA K++ A L+ + G +P+ YT+++
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQ 473
K+G A + M++ G + + LE H++S +
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNK 506
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 142/293 (48%), Gaps = 1/293 (0%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N ++ L +A KL+ AF K++ G G +D +YN LI+ K ++F + M
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
D+ TY ++I L +++ A + + + K + P +S ++D KA R +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
+ + EM ++P+ +Y LI +Y ++G+L AL L ++MK G PN YT +++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
+ +++ A +F +M G P Y+ L++ + GQ+ L M + + P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSV 543
TYT ++ A V A+++L EM+ G D ++ + + Y+K G V
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 28/428 (6%)
Query: 227 DAIQSL---FDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
DA+ SL FDE ++ D + + Y Q+ K + LA F + G
Sbjct: 173 DAMASLSLCFDEEIRRKMSDLL--IEVY--CTQF--KRDGCYLALDVFPVLANKGMFPSK 226
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
T N L+T + K E ++ + S D + I + K G+++ A KLF +
Sbjct: 227 TTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK 285
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M+E + P+ F++++D +G GR D A +M G+ P+ Y+ L++ T+A +
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
+ A + EM K GF PN +Y +++S ++G L+ A+ I + M G T STY+
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
L++ + +GQ D+A +L M + G ++T+++ LL S + D A + + EM
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 524 FSVDVSASDVLMVYI-KDGSVDLALR-WLRFMDSSGI---RTNNFIIRQLFESCMKNGLY 578
S L+ + K G AL W +F++ + RT+N ++ L E+ G
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA----GKL 521
Query: 579 ESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLI-------LGATRHKAH 631
+ A + + + +D V Y ++++ C +++ + M + L +
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGC--CGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 632 KFMCGLFT 639
+CGLF
Sbjct: 580 ILICGLFN 587
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 145/301 (48%), Gaps = 3/301 (0%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G VDT+T NAL+ G ++F I + + C +D +Y +I +LD A
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
F EM +R ++P +S L+ + +++ A++ + + + G+ P Y+ +I+
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
KA + + +DEM +PN +Y ++ + +SG+L A+ + DM+ G P
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS-KKLVDVAAKIL 516
+TY+ L++ + +V+ A L+ M GL P + YTA++ ++V V +L
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC-LL 738
Query: 517 LEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKN 575
EM + + ++ + ++ Y +DG+V A R L M GI ++ ++ +K
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Query: 576 G 576
G
Sbjct: 799 G 799
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 122/247 (49%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+YN +I +KL+ AF ++ G K D TY+ LI N ++ + ++
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ D TY +MI K+ R + + F EM +N++P+ +++ L+ + ++GRL
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A+++ +M+ G+ P++ Y SLI+ + +++ A L++EM+ G PN YT +
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
++ K G++ + +M P TY+ ++ +A G V A +L N M G+
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 490 RPGMSTY 496
P TY
Sbjct: 782 VPDSITY 788
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 172/403 (42%), Gaps = 4/403 (0%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
++ PN + + D L +D ++MV+ + + Y+ +++ L +A+
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME---PTLITYSILVKGLTRAK 344
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
++ A+ K++ G + YN LI F+ G K+ EI + M + SL SSTY
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
+I K+G+ D A +L +EM + G F+S++ + D+A++ EM
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 383 GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
+ P + +LI K GK AL LW + GF + ++ ++GKLD A
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 443 MSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTL 502
I ++ G + +Y+ L+ ++D A + M GL+P TY+ ++
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 503 LASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTN 561
L + V+ A + + K G DV V++ K + + M S ++ N
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 562 NFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ L + ++G A L E + + YTS++
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 167/387 (43%), Gaps = 21/387 (5%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P++ +L +L ++ +F FD + + S D + I K K+E A
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPD----VYLFTTAINAFCKGGKVEEA 279
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F K++ +G + T+N +I G ++F E M TY +++
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L ++ R+ A+ + +EM ++ P+ ++++L+DS +AG L+ A++I M GL +
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
++ Y +LI+ Y K G+ D A RL EM GF N G +T ++ D+A+
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+M P + L+ G+ A++L+ N G T A+L L
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 508 LVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
+D A +I E+ G +D VS + ++ +D A +L M G++ +N+
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 567 ----------------QLFESCMKNGL 577
Q ++ C +NG+
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGM 606
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 5/268 (1%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSK-DGISSFDAYNRVIQYLAKAEKLELAFCCF 271
Y L + D DEMV+ K D + Y+ +I L K+E A +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT----YSILICGLFNMNKVEEAIQFW 598
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
+ +G D TY+ +I + E ++ M + ++ Y +I + +S
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
GRL +A +L ++MK + I P+ ++SL+ M R++ A ++ EMR GL P+ Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
+LI+ Y K G++ L EM PN YT+++ A+ G + A + N+M +
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMK 479
G +P TY + + G V A K
Sbjct: 779 KGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 14/232 (6%)
Query: 187 VNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS 246
+N ++ ++ + KR +P+ Y ++ D ++ + Q FDEM+ SK+
Sbjct: 588 MNKVEEAIQFWDDCKRNGM-LPDVYTYSVMIDGCCKAERTEEGQEFFDEMM---SKNVQP 643
Query: 247 SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE-- 304
+ YN +I+ ++ +L +A + ++ G ++ TY +LI KG+ S
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI-----KGMSIISRVEE 698
Query: 305 ---IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVD 361
++E M + Y +I K G++ L +EM +N+ P+ ++ ++
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 362 SMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDE 413
+ G + A ++ EMR G+ P + Y I Y K G + A + DE
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 173/399 (43%), Gaps = 12/399 (3%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
L A+ + ++A+ SLF + + SF +I + +L LA C K+
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT---LIDCFCRCARLSLALSCLGKMM 141
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
G + T+ +L+ F + Y++ + + + + Y +I SL + G+++
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
A + + MK+ IRP ++SL+ + +G + +I +M G+ P +++LI
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
+ Y K G+L A + ++EM + PN Y ++ G LD A + N + GF
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
P TY+ L+ + + +VD MK+ M+ G+ TY + A K+
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381
Query: 516 LLEMKAMGFSVDVSASDVLMVYIKD-GSVDLALRWLRFMDSS----GIRTNNFIIRQLFE 570
L M + G D+ ++L+ + D G + AL L + S GI T N II+ L
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGL-- 439
Query: 571 SCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
K E A L + D++ Y +++ L R
Sbjct: 440 --CKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 1/287 (0%)
Query: 319 STYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
S Y + S S + + A LF +M E + PS FS L+ ++ K + + + ++
Sbjct: 45 SDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRH 104
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
+ G+ + +LI+ + + +L AL +M K GF P+ + +V +
Sbjct: 105 LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 164
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
AMS+ + + G+ P Y+ +++ GQV++A+ + M G+RP + TY +
Sbjct: 165 FYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNS 224
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSG 557
++T L V+A+IL +M MG S DV + S ++ VY K+G + A + M
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284
Query: 558 IRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ N L +GL + AK +L V+ + V Y +++
Sbjct: 285 VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 35/293 (11%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN +I L + ++ A K ++ G + D TYN+LIT + G S I M
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMG------ 364
S D T+ +I K G+L A K + EM +R++ P+ ++SL++ +
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 365 -----------------------------KAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
KA R+D MKI M G+ Y +L
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
+ Y +AGK A ++ M G P+ + ++++ GK+ A+ D++K+ +
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
TY+ +++ + +V+ A L+ S+ G+ P + TY ++ L K+L
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRL 479
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 177/370 (47%), Gaps = 5/370 (1%)
Query: 189 DIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSF 248
DID +LSL K ++ + Y + DAL ++ + +LF EM + + +
Sbjct: 235 DIDLALSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT- 292
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
YN +I+ L + A + + T++ALI F+ +G ++ ++Y+
Sbjct: 293 --YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M D TY +I RLD A +F+ M ++ P+ +++L+ KA R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
++ M+++ EM GL + Y +LI+ +AG D A +++ +M G P+ Y++
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
+++ K GKL+ A+ +F ++K+ P TY+ ++E +G+V+ L+ S++ G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLAL 547
++P + YT +++ K L + A + EMK G + + L+ ++DG +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 548 RWLRFMDSSG 557
++ M S G
Sbjct: 591 ELIKEMRSCG 600
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 162/380 (42%), Gaps = 4/380 (1%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
Y PN + L L +L D MV + + + Y V+ L K ++
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT---YGTVVNGLCKRGDID 237
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
LA KK++ + D Y +I N + ++ M+ + TY +I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L GR A +L +M ER I P+ FS+L+D+ K G+L A K+Y EM +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P Y+SLI + +LD A +++ M PN Y +++ K+ +++ M +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
F +M + G + TY+ L++ +G D A K++ M + G+ P + TY+ +L L
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFI 564
++ A + ++ D+ ++++ K G V+ + G++ N I
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 565 IRQLFESCMKNGLYESAKPL 584
+ + GL E A L
Sbjct: 538 YTTMISGFCRKGLKEEADAL 557
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 178/409 (43%), Gaps = 10/409 (2%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD--AYNRVIQYLAKAEKLELAFCCFKK 273
L A+ + FD + SL + M ++ S+D +YN +I + +L LA K
Sbjct: 86 LLSAIAKMNKFDLVISLGERM-----QNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
+ G + D T ++L+ + + ++ + + M + ++ T+ +I L +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
A L M R +P + ++V+ + K G +D A+ + +M + +Y +
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+I++ ++ AL L+ EM G RPN Y ++ G+ A + +DM +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
P T+S L++ G++ A KLY+ M + P + TY++++ +D A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 514 KIL-LEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESC 572
+ L + F V+ + ++ + K V+ + R M G+ N L +
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 573 MKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLML 621
+ G + A+ + + V+ D++ Y+ +L L C+ + E+ L++
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL--CKYGKLEKALVV 487
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 7/281 (2%)
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+LD A LF EM + PS F+ L+ ++ K + D + + M+ + Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
LI + + +L AL + +M K G+ P+ + ++ ++ A+++ + M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
+ P T++ L+ + A+ L + M G +P + TY ++ L + +D+A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 513 AKILLEMKAMGFSVDV----SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQL 568
+L +M+ DV + D L Y +V+ AL MD+ GIR N L
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNY---KNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 569 FESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
G + A LL + ++V +++++ V+
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 177/377 (46%), Gaps = 15/377 (3%)
Query: 147 AVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWY 206
AVA + +V+R P L T+ + L I A ++N ++A AK ++
Sbjct: 209 AVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA-------AKIEA-- 258
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
N Y + D+L + R D +LF EM + + + Y+ +I L E+
Sbjct: 259 --NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT---YSSLISCLCNYERWSD 313
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A + + T+NALI F+ +G ++ ++Y+ M D TY +I
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
RLD A +F+ M ++ P+ +++L++ KA R+D ++++ EM GL
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
+ Y +LI + +A D A ++ +M G PN Y +++ K+GKL+ AM +F
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
++++ PT TY+ ++E +G+V+ L+ S++ G++P + Y +++ K
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 507 KLVDVAAKILLEMKAMG 523
L + A + +M+ G
Sbjct: 554 GLKEEADALFRKMREDG 570
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 170/384 (44%), Gaps = 5/384 (1%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
DA+ +L D+MV+ + +F +I L K A ++ G + + TY
Sbjct: 173 DAV-ALVDQMVEMGYRPDTITFTT---LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
++ +G +F + MEAA+ + Y +I SL K D A LF EM+
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+ +RP+ +SSL+ + R A ++ +M + P+ + +LI+++ K GKL
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
A +L+DEM K P+ Y+ ++ +LD A +F M P TY+ L+
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSV 526
+ ++D ++L+ M+ GL TYT ++ + D A + +M + G
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 527 DVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
++ + L+ + K+G ++ A+ ++ S + + + E K G E L
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 586 ETYVNSAAKVDLVLYTSILAHLVR 609
+ K D+++Y ++++ R
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCR 552
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 137/300 (45%), Gaps = 3/300 (1%)
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
E M+ S + TY ++I + ++ +A L +M + PS SSL++
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
R+ A+ + +M G RP + +LI K A+ L D M + G +PN Y
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
++V K G +D A ++ N ME A YS +++ D A+ L+ M N
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDL 545
G+RP + TY+++++ L + + A+++L +M + +V + L+ ++K+G +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFES-CMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
A + M I + F L CM + L E AK + E ++ ++V Y +++
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE-AKHMFELMISKDCFPNVVTYNTLI 407
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 135/305 (44%), Gaps = 4/305 (1%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
D +L+L+ + + PN Y L L + L +M++ + +F+A
Sbjct: 277 DDALNLFTEMENKGVR-PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
+I K KL A + ++ D TY++LI F ++ ++E M
Sbjct: 336 ---LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ C + TY +I K+ R+D +LF+EM +R + + +++L+ +A D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
A ++ +M G+ P+ Y +L++ K GKL+ A+ +++ ++++ P Y +++
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
E K+GK++ +F + G P Y+ ++ G + A L+ M G
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Query: 491 PGMST 495
P T
Sbjct: 573 PDSGT 577
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 7/296 (2%)
Query: 318 SSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM 377
S Y ++ + S +LD A LF M + PS F+ L+ ++ K + D + +
Sbjct: 50 SGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 378 EMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG 437
+M+ G+ + Y LI + + ++ AL L +M K G+ P+ + ++
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
++ A+++ + M + G+ P T++ L+ + A+ L + M G +P + TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSS 556
++ L + +D+A +L +M+A +V S V+ K D AL M++
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 557 GIRTNNFIIRQLFESCMKNGLYE---SAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
G+R N L SC+ N YE A LL + ++V + +++ V+
Sbjct: 290 GVRPNVITYSSLI-SCLCN--YERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
ID + L++ Q V N Y L Q+RD D Q +F +MV D I +
Sbjct: 416 IDEGVELFREMS-QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT-- 472
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
YN ++ L K KLE A F+ +Q S + TYN +I G ++++ S+
Sbjct: 473 -YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
D Y MI + G + A LF++M+E P G
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 142/288 (49%), Gaps = 4/288 (1%)
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
K++ G + D YN +I GL + E+++ ME D+ TY ++ L SG
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
R A +L ++M R+I P+ F++++D K G+ AMK+Y EM + P Y
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
SLI G++D A ++ D M G P+ Y ++ KS ++D +F +M +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G + TY+ +++ + +G+ D+A ++++ M + RP + TY+ +L L V+ A
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKA 400
Query: 513 AKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIR 559
+ M+ +D++ ++++ K G+V+ A R + G++
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 173/426 (40%), Gaps = 36/426 (8%)
Query: 217 FDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQG 276
F S + + LF +M+Q I F ++V+ +AK++ +L F ++
Sbjct: 41 FSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDF---SKVLSKIAKSKNYDLVISLFHHMEV 97
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
G D +YN +I + + M D T +I + R+
Sbjct: 98 CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 157
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
A L +M+E RP I+++++D K G ++ A++++ M G+R A Y SL+
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
+G+ A RL +M PN +T +++ K GK AM ++ +M + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 457 TPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
TY+ L+ G+VD A ++ + M G P + TY ++ K VD K+
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 517 LEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSS-GIRTNNFIIRQL------ 568
EM G D ++ + ++ Y + G D A MDS IRT + ++ L
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRV 397
Query: 569 ------FESCMKN-------------------GLYESAKPLLETYVNSAAKVDLVLYTSI 603
FE+ K+ G E A L + K D+V YT++
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 604 LAHLVR 609
++ R
Sbjct: 458 ISGFCR 463
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 147/299 (49%), Gaps = 9/299 (3%)
Query: 227 DAIQSLFDEMVQDSSK-DGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQT 285
DA++ LFD M +D + D ++ YN ++ L + + A + + + T
Sbjct: 192 DAVE-LFDRMERDGVRADAVT----YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
+ A+I +F+ +G ++ ++YE M D TY +I L GR+D A ++ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
+ P +++L++ K+ R+D K++ EM GL Y ++I+ Y +AG+ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A ++ M RPN Y++++ + +++ A+ +F +M+K+ +TY+ ++
Sbjct: 367 AAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
G V+ A L+ S++ GL+P + +YT +++ K+ D + + +M+ G
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
Query: 242 KDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYK 301
+D + + + VI K K A ++++ D TYN+LI G +
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 302 SFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVD 361
+ ++ + M C D TY +I KS R+D KLF+EM +R + +++++
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 362 SMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRP 421
+AGR D A +I+ M RP+ Y+ L+ +++ AL L++ M+K+
Sbjct: 358 GYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 422 NYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLY 481
+ Y +++ K G ++ A +F + G P +Y+ ++ Q D + LY
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 482 NSMTNAGLRP 491
M GL P
Sbjct: 475 RKMQEDGLLP 484
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 118/268 (44%), Gaps = 10/268 (3%)
Query: 157 RWKWGPELETHLDKLQFLPNM---THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECY 213
RW L + +PN+ T ++ ++ LY+ R+ P+ Y
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTY 282
Query: 214 LLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKK 273
L + L D + + D MV +K + YN +I K+++++ F++
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMV---TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
+ G DT TYN +I + G P + EI+ M++ + TY +++ L + R
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWR 396
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
++ A LF+ M++ I ++ ++ M K G ++ A ++ + GL+P Y +
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRP 421
+I + + + D + L+ +M++ G P
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 95/244 (38%), Gaps = 4/244 (1%)
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
PS ++ ++ K+ D + L+ M+ G + Y +++ + + A+S+
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
M K G+ P T S L+ +V A+ L + M G RP + Y I+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 506 KKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFI 564
LV+ A ++ M+ G D V+ + ++ G A R +R M I N
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 565 IRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLV---RCQEEQNERHLML 621
+ + +K G + A L E D+ Y S++ L R E + LM+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 622 ILGA 625
G
Sbjct: 307 TKGC 310
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%)
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
K D A++ G + ++ M + TY MI S SGR A +
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
L + M E+ I P FS+L+++ K ++ A +IY EM + + P+ Y S+I+ +
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
K ++D A R+ D M G P+ ++ ++ K+ ++D M IF +M + G +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
TY+ L+ G +D+A L N M + G+ P T+ +L L SKK + A IL ++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 520 K 520
+
Sbjct: 247 Q 247
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D T++ALI F+ + ++ EIY+ M + TY MI K R+D A ++
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
M + P FS+L++ KA R+D M+I+ EM G+ + Y +LI + +
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
G LD A L +EM G P+Y + ++ +L A +I D++K+
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M + +I+ I +++VD + K G A ++ EM G+ P+ Y +I+S+ +G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
A +L M + P+ ++ ++ + K K+ A I+ +M + PT TY+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
+++ +VD A ++ +SM + G P + T++ ++ K VD +I EM G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 524 FSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGI 558
+ V+ + ++ + + G +D A L M S G+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 170/349 (48%), Gaps = 10/349 (2%)
Query: 178 THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQS-LFDEM 236
T +LQ L+++ L + W + + E+ + L+ + L ++R+ + ++ LF
Sbjct: 69 TTVLQTLRLIKVPADGLRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLFS-- 125
Query: 237 VQDSSKDGISSFDAY-NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLN 295
++ S + D Y N +I+ A + + F+ ++ G T+N+L+++ L
Sbjct: 126 IERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLK 185
Query: 296 KGLPYKSFEIYESMEAA-QCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
+G + ++++ M + DS T+ +I K+ +D AF++F++M+ + P
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEM--RGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
+++++D + +AG++ A + M + + P+ Y +L+ Y ++D A+ ++
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA--GFLPTPSTYSCLLEMHAA 470
+M G +PN Y +++ +++ + D I A F P T++ L++ H
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
+G +D+AMK++ M N L P ++Y+ ++ L + D A + E+
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
Query: 315 SLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERN---IRPSFGIFSSLVDSMGKAGRLDT 371
S ++ LM+ L ++ L+VA ++ R+ ++ F+SL+ S G AG
Sbjct: 97 SHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQE 156
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA-GFRPNYGLYTLIV 430
++K++ M+ G+ PS + SL+ K G+ A L+DEM++ G P+ + ++
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLI 216
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG-- 488
K+ +D A IF DME P TY+ +++ +G+V A + + M
Sbjct: 217 NGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD 276
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
+ P + +YT ++ K+ +D A + +M + G + + L+
Sbjct: 277 VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 130/313 (41%), Gaps = 25/313 (7%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y L ++ D +F +M+ K + YN +I+ L++A + +
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT---YNTLIKGLSEAHRYDE- 334
Query: 268 FCCFKKVQGSGGKV------DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
K + G D T+N LI + G + ++++ M + DS++Y
Sbjct: 335 ---IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNI-------RPSFGIFSSLVDSMGKAGRLDTAMK 374
++I +L D A LF E+ E+ + +P ++ + + + G+ A K
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 375 IYMEM--RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
++ ++ RG PS Y +LI + + GK A L M + F P+ Y L+++
Sbjct: 452 VFRQLMKRGVQDPPS---YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDG 508
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
K G+ A M ++ +LP +T+ +L A + + L M +R
Sbjct: 509 LLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQN 568
Query: 493 MSTYTAILTLLAS 505
+ T ++ LL S
Sbjct: 569 IDLSTQVVRLLFS 581
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDS---SKDGIS 246
+DA++ +++ + P+ Y +L L +FD ++LF+E+ + KD
Sbjct: 369 LDAAMKVFQEMLNMKLH-PDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK 427
Query: 247 SFDA-YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEI 305
A YN + +YL K + A F+++ G + D +Y LIT +G ++E+
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYEL 486
Query: 306 YESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGK 365
M + D TYEL+I L K G +A Q M + P F S++ + K
Sbjct: 487 LVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAK 546
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 193/431 (44%), Gaps = 9/431 (2%)
Query: 178 THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMV 237
T ++ A + D+D +LS + K + + + Y ++ +++ +A FDE
Sbjct: 348 TSLIHAYAVGRDMDEALSCVRKMKEEGIEM-SLVTYSVIVGGFSKAGHAEAADYWFDE-- 404
Query: 238 QDSSKDGISSFDA--YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLN 295
+K + +A Y ++I + +E A ++++ G Y+ ++ +
Sbjct: 405 ---AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTM 461
Query: 296 KGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI 355
K +++ ++ + TY +I K G++ A ++ + MKE ++ +
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
+S +++ K A ++ +M G++P +Y ++I ++ G +D A++ EM+
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
K RP + I+ AKSG + ++ +F+ M + G +PT T++ L+ Q++
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 476 SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
A+++ + MT AG+ TYT I+ AS A + ++ G VD+ + L+
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 536 -VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAK 594
K G + AL + M + I N+F+ L + + G A L++ K
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 595 VDLVLYTSILA 605
D+ YTS ++
Sbjct: 762 PDIHTYTSFIS 772
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 173/402 (43%), Gaps = 4/402 (0%)
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAF 268
N Y + A Q+ + + ++L EM ++ I+ + +A +K
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKK---GL 469
Query: 269 CCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
FK+++ G TY LI L+ G K+ E+ M+ + TY +MI
Sbjct: 470 VVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
K AF +F++M + ++P ++++++ + G +D A++ EM+ RP+
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTT 589
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
+ +I Y K+G + +L ++D M++ G P + ++ + +++ A+ I ++
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
M AG TY+ +++ +A+ G A + + + N GL + TY A+L
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 509 VDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQ 567
+ A + EM A + ++L+ + + G V A ++ M G++ +
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 769
Query: 568 LFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+C K G A +E K ++ YT+++ R
Sbjct: 770 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWAR 811
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 158/367 (43%), Gaps = 36/367 (9%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
Y +I A ++ A C +K++ G ++ TY+ ++ F G + ++ +
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+L++S Y +I + ++ ++ A L +EM+E I I+ +++D
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALR--------------------- 409
+ ++ ++ G P+ Y LI YTK GK+ AL
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 410 --------------LWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
++++M K G +P+ LY I+ + G +D A+ +M+K
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
PT T+ ++ +A SG + ++++++ M G P + T+ ++ L K+ ++ A +I
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
Query: 516 LLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMK 574
L EM G S + + ++ Y G A + + + G+ + F L ++C K
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 575 NGLYESA 581
+G +SA
Sbjct: 707 SGRMQSA 713
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 153/324 (47%), Gaps = 12/324 (3%)
Query: 179 HILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQ 238
+I+ A + ++D ++ K ++ + P ++ + +S D +FD M +
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLR-HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 239 DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGL 298
+ + +N +I L + ++E A ++ +G + TY ++ + + G
Sbjct: 618 CGC---VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 299 PYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNI-RPSFGIFS 357
K+FE + ++ +D TYE ++ + KSGR+ A + +EM RNI R SF +++
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF-VYN 733
Query: 358 SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA 417
L+D + G + A + +M+ G++P Y S I + +KAG ++ A + +EM+
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 418 GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSA 477
G +PN YT +++ A++ + A+S + +M+ G P + Y CLL + + A
Sbjct: 794 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Query: 478 ------MKLYNSMTNAGLRPGMST 495
M + M AGL M T
Sbjct: 854 YIYSGVMTICKEMVEAGLIVDMGT 877
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 129/284 (45%), Gaps = 6/284 (2%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
+I AK+ + + F ++ G T+N LI + K K+ EI + M A
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
S + TY ++ A G AF+ F ++ + + +L+ + K+GR+ +A+
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
+ EM + ++ +Y LI+ + + G + A L +MKK G +P+ YT + +
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
+K+G ++ A +ME G P TY+ L++ A + + A+ Y M G++P
Sbjct: 775 SKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Query: 494 STYTAILTLLASKKLVDVA------AKILLEMKAMGFSVDVSAS 531
+ Y +LT L S+ + A I EM G VD+ +
Sbjct: 835 AVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTA 878
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 148/328 (45%), Gaps = 3/328 (0%)
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAF 268
N + Y ++ + + +D+ ++F++MV++ K + YN +I ++ A
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI---LYNNIISAFCGMGNMDRAI 574
Query: 269 CCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
K++Q + T+T+ +I + G +S E+++ M C T+ +I L
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
+ +++ A ++ EM + + ++ ++ G A + + ++ GL
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 694
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
Y +L+++ K+G++ +AL + EM N +Y ++++ A+ G + A +
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
M+K G P TY+ + + +G ++ A + M G++P + TYT ++ A L
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 814
Query: 509 VDVAAKILLEMKAMGFSVDVSASDVLMV 536
+ A EMKAMG D + L+
Sbjct: 815 PEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 124/269 (46%), Gaps = 1/269 (0%)
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
+ ++ + +G +++ E +E M A + S Y +I + A +D A ++MK
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
E I S +S +V KAG + A + E + +A++Y +I ++ + ++
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A L EM++ G +Y +++ + +F +++ GF PT TY CL+
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
++ G++ A+++ M G++ + TY+ ++ K A + +M G
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 526 VDVSA-SDVLMVYIKDGSVDLALRWLRFM 553
DV ++++ + G++D A++ ++ M
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 7/264 (2%)
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
E+ +PS F +V G+ G + A + + MR G+ P++ +Y SLI +Y +D
Sbjct: 302 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMD 361
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
AL +MK+ G + Y++IV +K+G + A F++ ++ S Y ++
Sbjct: 362 EALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL---TLLASKKLVDVAAKILLEMKAM 522
H + ++ A L M G+ ++ Y ++ T++A +K V K L K
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL---KEC 478
Query: 523 GFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
GF+ V L+ +Y K G + AL R M G++ N + +K + +A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 582 KPLLETYVNSAAKVDLVLYTSILA 605
+ E V K D++LY +I++
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIIS 562
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 184/393 (46%), Gaps = 15/393 (3%)
Query: 200 AKRQSWYVPNEECYLLLFDALNQSRDFD---AIQSLFDEMVQDSS--KDGISSFDAYNRV 254
A RQ VP+ + L +A +S A++ L +MV++S D I+ YN +
Sbjct: 250 AMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL--DMVRNSGLRPDAIT----YNTL 303
Query: 255 IQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQC 314
+ ++ L+ A F+ ++ + D TYNA+I+++ GL ++ ++ +E
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 315 SLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMK 374
D+ TY ++ + A+ + +++Q+M++ +++++ GK G+LD A++
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 375 IYMEMRGF-GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
+Y +M+G G P A Y LI+S KA + A L EM G +P Y+ ++
Sbjct: 424 LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGY 483
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
AK+GK + A F+ M ++G P YS +L++ + A LY M + G P
Sbjct: 484 AKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSY 543
Query: 494 STYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFM 553
+ Y ++ L + D K + +M+ + + S VL +K DLA R L+
Sbjct: 544 TLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVL---VKGECFDLAARQLKVA 600
Query: 554 DSSGIRTNNFIIRQLFESCMKNGLYESAKPLLE 586
++G N + + S +G + A LLE
Sbjct: 601 ITNGYELENDTLLSILGSYSSSGRHSEAFELLE 633
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 145/311 (46%), Gaps = 7/311 (2%)
Query: 193 SLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYN 252
+L +++W + W+ PN + L + +SL E+ + YN
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQ----ESLAVEIFTRAEPTVGDRVQVYN 229
Query: 253 RVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKG--LPYKSFEIYESME 310
++ +++ K A ++ G D ++N LI L G P + E+ + +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ D+ TY ++ + ++ LD A K+F++M+ +P +++++ G+ G
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
A +++ME+ G P A Y SL+ ++ + + ++ +M+K GF + Y I+
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Query: 431 ESNAKSGKLDTAMSIFNDMEK-AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
K G+LD A+ ++ DM+ +G P TY+ L++ + + A L + M + G+
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI 469
Query: 490 RPGMSTYTAIL 500
+P + TY+A++
Sbjct: 470 KPTLQTYSALI 480
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/584 (20%), Positives = 241/584 (41%), Gaps = 56/584 (9%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
Y +I+ K + + A ++ SG D +T+N+L++ + G ++ I+ +M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
S + +++ +L GRL+ + + +E+++ + S ++D+ +AG +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
KIY M+ G P+ +Y +IE K ++ A + EM++A F+ ++ ++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ + ++ +++ G P +TY+ L+ M+ + + L M N GL
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKD-GSVDLALRW 549
P + TY ++++ +K ++ A ++ E+ + G +D S +M +D GS A +
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
L+ M ++GI + L S +G + A+ +L ++ ++ + Y+S++ +R
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Query: 610 CQE----------------EQNER----------------HLMLILGATRHKAHKFMCGL 637
++ E + R +ML+L A L
Sbjct: 1115 SKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLPIRL 1174
Query: 638 FTGPEQRKQPVLSFVREFFQGIDYELEEGAARXXXXXXXXXXXXMGQINRARCVWKVAYE 697
G R + ++S V +F+ + +E+ AA A V+++ +
Sbjct: 1175 LAG---RPELLVSEVDGWFEKLK-SIEDNAALNFVNALLNLLWAFELRATASWVFQLGIK 1230
Query: 698 NKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVIPRRIKLVTGP- 756
+F + W D R LS GAAL A + Y P+ + L+TG
Sbjct: 1231 RGIFSLDVFRVADKDWGADFRRLSGGAALDASLEG----------YPESPKSVVLITGTA 1280
Query: 757 -----TLKIVVAQMLSSVESPFEVSKV---VLRAPGDSVMEWFK 792
+L + L + SPF K +L A S+ W K
Sbjct: 1281 EYNGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRMWLK 1324
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 159/364 (43%), Gaps = 4/364 (1%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
RQS P+ + + L A Q ++ +++F+ M++D + S N ++ L
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESI---NILLHALCVD 835
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
+LE + +++Q G K+ + ++ F G ++ +IY SM+AA Y
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
+MI L K R+ A + EM+E N + I++S++ +++Y ++
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
GL P T Y +LI Y + + + L +M+ G P Y ++ + K L+
Sbjct: 956 TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQ 1015
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
A +F ++ G S Y ++++ SG A KL M NAG+ P ++T ++
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMV 1075
Query: 502 LLASKKLVDVAAKILLEMKAMGFSV-DVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRT 560
+S A K+L +K + + S V+ Y++ + + L M G+
Sbjct: 1076 SYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEP 1135
Query: 561 NNFI 564
++ I
Sbjct: 1136 DHRI 1139
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 138/297 (46%), Gaps = 6/297 (2%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL--DTAMKIYME 378
Y M+ ++SG+ A +L M++R P F++L+++ K+G L + A+++
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
+R GLRP A Y +L+ + ++ LD A++++++M+ +P+ Y ++ + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
A +F ++E GF P TY+ LL A + ++Y M G TY
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 499 ILTLLASKKLVDVAAKILLEMKAM-GFSVDVSASDVLMVYI--KDGSVDLALRWLRFMDS 555
I+ + + +D+A ++ +MK + G + D VL+ + + +V+ A +D
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD- 466
Query: 556 SGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQE 612
GI+ L K G E A+ + S K D + Y+ +L L+R E
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 147/316 (46%), Gaps = 5/316 (1%)
Query: 214 LLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKK 273
LL+ DA ++ + ++ ++ M + + + Y +I+ L K +++ A +
Sbjct: 861 LLMLDAFARAGNIFEVKKIYSSM---KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSE 917
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
++ + KV+ +N+++ ++ K+ ++Y+ ++ D +TY +I + R
Sbjct: 918 MEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR 977
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
+ + L Q+M+ + P + SL+ + GK L+ A +++ E+ GL+ + Y +
Sbjct: 978 PEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHT 1037
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+++ +G A +L MK AG P L++ S + SG A + ++++
Sbjct: 1038 MMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTE 1097
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA-SKKLVDVA 512
T YS +++ + S +S ++ M GL P +T + + SK+ ++V
Sbjct: 1098 VELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVM 1157
Query: 513 AKILLEMKAMGFSVDV 528
+L ++ +GF + +
Sbjct: 1158 L-LLKALEDIGFDLPI 1172
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/380 (17%), Positives = 155/380 (40%), Gaps = 4/380 (1%)
Query: 229 IQSLFDEMVQDSSKDG--ISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
+ + DE D G S Y ++ E A F ++ SG +
Sbjct: 660 LSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVC 719
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSS-TYELMIPSLAKSGRLDVAFKLFQEMK 345
+++ ++ G P + ++ E S Y +I + K A + ++
Sbjct: 720 KSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLR 779
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
+ P ++SL+ + + G + A I+ M G P+ L+ + G+L+
Sbjct: 780 QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLE 839
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
+ +E++ GF+ + L++++ A++G + I++ M+ AG+LPT Y ++
Sbjct: 840 ELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMI 899
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
E+ +V A + + M A + ++ + ++L + + + ++ +K G
Sbjct: 900 ELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLE 959
Query: 526 VDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
D + + L++ Y +D + ++ M + G+ + L + K E A+ L
Sbjct: 960 PDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQL 1019
Query: 585 LETYVNSAAKVDLVLYTSIL 604
E ++ K+D Y +++
Sbjct: 1020 FEELLSKGLKLDRSFYHTMM 1039
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 161/402 (40%), Gaps = 11/402 (2%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
+D +L LYK K S P+ Y +L D+L ++ +L EM+ K + ++
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
A +I AKA K E A F + SG K D Y+ ++ + L K++ +Y M
Sbjct: 478 A---LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ + + YELMI L K R D K ++M+E I S LV K
Sbjct: 535 ISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLV----KGECF 590
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
D A + G S++ SY+ +G+ A L + +K+ + +
Sbjct: 591 DLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEAL 650
Query: 430 VESNAKSGKLDTAM-SIFNDMEKAGFLPTPST-YSCLLEMHAASGQVDSAMKLYNSMTNA 487
+ + K L A+ F D G+ ST Y LL A+ A ++++ + +
Sbjct: 651 IVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLS 710
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA--SDVLMVYIKDGSVDL 545
G S +++ + + A +++ + + GF S +D++ Y K
Sbjct: 711 GCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQK 770
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLET 587
A + + SG + L + + G YE A+ + T
Sbjct: 771 AESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNT 812
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 173/375 (46%), Gaps = 5/375 (1%)
Query: 212 CYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCF 271
C +L + D ++ S EM++ +++F N +I L E +
Sbjct: 161 CNAILGSVVKSGEDV-SVWSFLKEMLKRKICPDVATF---NILINVLCAEGSFEKSSYLM 216
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
+K++ SG TYN ++ + KG + E+ + M++ D TY ++I L +S
Sbjct: 217 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 276
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
R+ + L ++M++R I P+ +++L++ G++ A ++ EM FGL P+ +
Sbjct: 277 NRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF 336
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
+LI+ + G AL+++ M+ G P+ Y ++++ K+ + D A + M++
Sbjct: 337 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
G TY+ +++ +G +D A+ L N M+ G+ P + TY+A++
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 456
Query: 512 AAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFE 570
A +I+ + +G S + + S ++ + G + A+R M G ++F L
Sbjct: 457 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 516
Query: 571 SCMKNGLYESAKPLL 585
S K G A+ +
Sbjct: 517 SLCKAGKVAEAEEFM 531
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 169/438 (38%), Gaps = 39/438 (8%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ + +L + L F+ L +M + I + YN V+ + K + + A
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT---YNTVLHWYCKKGRFKAA 247
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
++ G D TYN LI K + + M + TY +I
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+ G++ +A +L EM + P+ F++L+D G A+K++ M GL PS
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y L++ K + D A + MK+ G YT +++ K+G LD A+ + N
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+M K G P TYS L+ G+ +A ++ + GL P Y+ ++
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNN---- 562
+ A +I M G + D +VL+ + K G V A ++R M S GI N
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 563 -------------------------------FIIRQLFESCMKNGLYESAKPLLETYVNS 591
F L + K G A+ L++
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607
Query: 592 AAKVDLVLYTSILAHLVR 609
A VD V+Y ++L + +
Sbjct: 608 PAAVDTVMYNTLLTAMCK 625
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 141/320 (44%), Gaps = 1/320 (0%)
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
Y+ LI ++L +G+ S EI+ M + T ++ S+ KSG + +EM
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
+R I P F+ L++ + G + + + +M G P+ Y +++ Y K G+
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A+ L D MK G + Y +++ +S ++ + DM K P TY+ L+
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
+ G+V A +L N M + GL P T+ A++ S+ A K+ M+A G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 526 -VDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
+VS +L K+ DLA + M +G+ + + KNG + A L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 585 LETYVNSAAKVDLVLYTSIL 604
L D+V Y++++
Sbjct: 426 LNEMSKDGIDPDIVTYSALI 445
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 1/258 (0%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
TY MI L K+G LD A L EM + I P +S+L++ K GR TA +I +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
GL P+ +Y++LI + + G L A+R+++ M G ++ + ++V S K+GK+
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
A M G LP ++ CL+ + SG+ A +++ MT G P TY ++
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGI 558
L L + A K L + A+ +VD V + +L K G++ A+ M I
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 559 RTNNFIIRQLFESCMKNG 576
+++ L + G
Sbjct: 645 LPDSYTYTSLISGLCRKG 662
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 199/488 (40%), Gaps = 31/488 (6%)
Query: 159 KWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFD 218
+WG H+D Q + H ALK + KW +Q + L+
Sbjct: 31 RWGSL--NHMDYRQARLRLVHGKLALKFL----------KWVVKQPGLETDHIVQLVCIT 78
Query: 219 A--LNQSRDFDAIQSLFDEMVQDSSKDGI-------------SSFDAYNRVIQYLAKAEK 263
L ++R +D + + E+ S K S+ Y+ +I+ +
Sbjct: 79 THILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGM 138
Query: 264 LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYEL 323
++ + F+ + G T NA++ + G + + M + D +T+ +
Sbjct: 139 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
+I L G + + L Q+M++ P+ +++++ K GR A+++ M+ G
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
+ Y LI ++ ++ L +M+K PN Y ++ + GK+ A
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
+ N+M G P T++ L++ H + G A+K++ M GL P +Y +L L
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378
Query: 504 ASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNN 562
D+A + MK G V ++ + ++ K+G +D A+ L M GI +
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438
Query: 563 FIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR--CQEEQNERHLM 620
L K G +++AK ++ + ++Y++++ + R C +E +
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498
Query: 621 LIL-GATR 627
+IL G TR
Sbjct: 499 MILEGHTR 506
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 4/330 (1%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
+PN + L + S + S+FDEM + +F Y +++ L K L
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH---PTFFTYGSLLKGLCKGGHLRE 596
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A K + VDT YN L+T G K+ ++ M DS TY +I
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656
Query: 327 SLAKSGRLDVAFKLFQEMKER-NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L + G+ +A +E + R N+ P+ +++ VD M KAG+ + +M G
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 716
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P ++I+ Y++ GK++ L EM PN Y +++ +K + T+ +
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+ + G LP T L+ S ++ +K+ + G+ T+ +++ +
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
++ A ++ M ++G S+D D ++
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMV 866
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 5/317 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+E Y +L D L ++ +FD + + M ++ G + Y +I L K L+ A
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT---YTGMIDGLCKNGFLDEA 422
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
++ G D TY+ALI F G + EI + S + Y +I +
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482
Query: 328 LAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+ G L A ++++ M E + R F F+ LV S+ KAG++ A + M G+ P
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHF-TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
+ + LI Y +G+ A ++DEM K G P + Y +++ K G L A
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
+ Y+ LL SG + A+ L+ M + P TYT++++ L K
Sbjct: 602 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Query: 507 KLVDVAAKILLEMKAMG 523
+A E +A G
Sbjct: 662 GKTVIAILFAKEAEARG 678
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 142/320 (44%), Gaps = 3/320 (0%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
+ D ++ + L EM +++G + YN ++ +K + + +F ++ +
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEM---GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
+G D T ++L+ + +I ++ +D T+ ++I +G ++
Sbjct: 782 LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
AF L + M I ++V + + R + + EM G+ P + Y LI
Sbjct: 842 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
+ G + TA + +EM P + +V + AK GK D A + M K +
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
PT ++++ L+ + +G V A++L M+N GL+ + +Y ++T L +K + +A ++
Sbjct: 962 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021
Query: 516 LLEMKAMGFSVDVSASDVLM 535
EMK GF + + L+
Sbjct: 1022 YEEMKGDGFLANATTYKALI 1041
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 160/381 (41%), Gaps = 12/381 (3%)
Query: 157 RWKWGPELETHLDKLQFLPNMTH---ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECY 213
+WK G +D L P++ ++ + I+ + L Q+ PN Y
Sbjct: 699 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG-PNLTTY 757
Query: 214 LLLFDALNQSRDFDAIQSLFDEMVQDSSKDGI--SSFDAYNRVIQYLAKAEKLELAFCCF 271
+L ++ +D L+ ++ + GI ++ V+ + ++ LE+
Sbjct: 758 NILLHGYSKRKDVSTSFLLYRSIILN----GILPDKLTCHSLVLG-ICESNMLEIGLKIL 812
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
K G +VD T+N LI+ G +F++ + M + SLD T + M+ L ++
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
R + + EM ++ I P + L++ + + G + TA + EM + P
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
++++ + K GK D A L M K P +T ++ K+G + A+ + M
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL-TLLASKKLVD 510
G +Y+ L+ A G + A +LY M G +TY A++ LLA +
Sbjct: 993 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1052
Query: 511 VAAKILLEMKAMGFSVDVSAS 531
A IL ++ A GF +S S
Sbjct: 1053 GADIILKDLLARGFITSMSLS 1073
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 139/384 (36%), Gaps = 40/384 (10%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y L A+ +S + SLF EMVQ S + Y +I L + K +A K
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSI---LPDSYTYTSLISGLCRKGKTVIAILFAK 672
Query: 273 KVQGSGGKVDTQT-YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
+ + G + + Y + G E M+ + D T MI ++
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
G+++ L EM +N P+ ++ L+ K + T+ +Y + G+ P
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL------------ 439
SL+ ++ L+ L++ G + + +++ +G++
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 440 ----------DTAMSIFN-------------DMEKAGFLPTPSTYSCLLEMHAASGQVDS 476
D +S+ N +M K G P Y L+ G + +
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 477 AMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM- 535
A + M + P +A++ LA D A +L M M +++ LM
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972
Query: 536 VYIKDGSVDLALRWLRFMDSSGIR 559
+ K+G+V AL M + G++
Sbjct: 973 LCCKNGNVIEALELRVVMSNCGLK 996
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 162/370 (43%), Gaps = 14/370 (3%)
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEM-----VQDSSKDGISSFDA 250
+ WA+R + + E Y +L + L S+ F + E + SSK F A
Sbjct: 88 FFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRA 147
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
Y+R A A F ++ G K + L+ +K + E + +
Sbjct: 148 YSR-------ANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ TY +++ A+ A K+F EM ERN +++L+D++ K+G +D
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
K++ EM GL+P A +A I +Y AG + +A ++ D MK+ PN + I+
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
++ K+ K+D A + ++M + G P TY+ ++ H +V+ A KL + M
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM--VYIKDGSVDLALR 548
P TY +L LL D A +I M F V+ V++ + K G ++ A R
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACR 440
Query: 549 WLRFMDSSGI 558
+ M GI
Sbjct: 441 YFEMMIDEGI 450
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 123/270 (45%), Gaps = 4/270 (1%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
VP+ + Y +L + RD + +FDEM++ ++ + AYN ++ L K+ ++
Sbjct: 205 VPSAKTYSILVRGWARIRDASGARKVFDEMLE---RNCVVDLLAYNALLDALCKSGDVDG 261
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
+ F+++ G K D ++ I + + G + ++++ + M+ + T+ +I
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+L K+ ++D A+ L EM ++ P ++S++ ++ A K+ M P
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNA-KSGKLDTAMSI 445
Y +++ + G+ D A +W+ M + F P YT+++ K GKL+ A
Sbjct: 382 DRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRY 441
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
F M G P +T L GQ+D
Sbjct: 442 FEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 182/381 (47%), Gaps = 6/381 (1%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
+DA+ S K + Q PN Y + A + ++ D +S+F EM++ + ++F
Sbjct: 465 VDAATSFLKMME-QKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP--NNF- 520
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y+ +I K + + A+ ++ S + + YN +I G K+ E+ +++
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 310 -EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
+ + S+ ++Y +I K G D A + ++EM E P+ F+SL++ K+ R
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
+D A+++ EM+ L+ Y +LI+ + K + TA L+ E+ + G PN +Y
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++ GK+D A+ ++ M G TY+ +++ G ++ A LY+ + + G
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLAL 547
+ P + ++ L+ K A+K+L EMK + +V S V+ + ++G+++ A
Sbjct: 761 IVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAF 820
Query: 548 RWLRFMDSSGIRTNNFIIRQL 568
R M GI ++ + L
Sbjct: 821 RLHDEMLEKGIVHDDTVFNLL 841
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 158/356 (44%), Gaps = 35/356 (9%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN ++ + + ++LA F ++ G + + TY+ LI F ++++ M
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRL 369
A+ + Y +I L K G+ A ++ Q + KE+ S ++S++D K G
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
D+A++ Y EM G P+ + SLI + K+ ++D AL + EMK + + Y +
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
++ K + TA ++F+++ + G +P S Y+ L+ G++D+A+ LY M N G+
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRW 549
+ TYT ++ L +KDG+++LA
Sbjct: 727 SCDLFTYTTMIDGL----------------------------------LKDGNINLASDL 752
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
+ GI + + L K G + A +LE +++LY++++A
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIA 808
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 12/333 (3%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA----YNRVIQYLAKAEK 263
PN Y +L D +++D + ++M S+F+A YN +I L K +
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQM-------NASNFEANEVIYNTIINGLCKVGQ 569
Query: 264 LELAFCCFKK-VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
A + ++ + +YN++I F+ G + E Y M S + T+
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
+I KS R+D+A ++ EMK ++ + +L+D K + TA ++ E+
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 383 GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
GL P+ ++Y SLI + GK+D A+ L+ +M G + YT +++ K G ++ A
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 443 MSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTL 502
+++++ G +P + L+ + GQ A K+ M + P + Y+ ++
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 503 LASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
+ ++ A ++ EM G D + ++L+
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 177/386 (45%), Gaps = 5/386 (1%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N V+ L ++ ++ A + K+ G D T L+ L + P ++ +I+ + +
Sbjct: 208 NNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMS 267
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER-NIRPSFGIFSSLVDSMGKAGRLD 370
D + L + + K+ L +A L +EM+ + + S ++S++ + K G ++
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
A+++ EM GFG+ S SL+ Y K +L AL L++ M++ G P+ +++++V
Sbjct: 328 EAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
E K+ +++ A+ + M+ P+ +++ + ++A++++N + +
Sbjct: 388 EWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIA 447
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVS-ASDVLMVYIKDGSVDLALRW 549
G I L + VD A L M+ G +V +++++ + + ++DLA
Sbjct: 448 HGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
M G+ NNF L + KN ++A ++ S + + V+Y +I+ L
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL-- 564
Query: 610 CQEEQNERHLMLILGATRHKAHKFMC 635
C+ Q + ++ + K + C
Sbjct: 565 CKVGQTSKAKEMLQNLIKEKRYSMSC 590
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQD 239
I+ V D D+++ Y+ ++ PN + L + +S D + EM
Sbjct: 596 IIDGFVKVGDTDSAVETYREMS-ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM--- 651
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
S + AY +I K ++ A+ F ++ G + YN+LI+ F N G
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
+ ++Y+ M S D TY MI L K G +++A L+ E+ + I P + L
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 360 VDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
V+ + K G+ A K+ EM+ + P+ +Y+++I + + G L+ A RL DEM + G
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Query: 420 RPNYGLYTLIV 430
+ ++ L+V
Sbjct: 832 VHDDTVFNLLV 842
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 134/286 (46%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y V++ + K+ + LA +K++ K+D Y+ +I G +F ++ M
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
E D Y +I +GR D KL ++M +R I P FS+L+D K G+L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A +++ EM G+ P Y SLI+ + K +LD A + D M G PN + ++
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ K+ +D + +F M G + TY+ L++ G+++ A +L+ M + +
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
RP + +Y +L L + A +I +++ +D+ ++++
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 157/340 (46%), Gaps = 9/340 (2%)
Query: 206 YVPNEECYLLLFDALN-QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKL 264
Y P+ + L + L + R +A++ L D MV+ K + + +A ++ L K+
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALE-LVDRMVEMGHKPTLITLNA---LVNGLCLNGKV 193
Query: 265 ELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELM 324
A ++ +G + + TY ++ + G + E+ ME + LD+ Y ++
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
I L K G LD AF LF EM+ + + I+++L+ AGR D K+ +M +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
P +++LI+ + K GKL A L EM + G P+ YT +++ K +LD A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA 504
+ + M G P T++ L+ + + +D ++L+ M+ G+ TY ++
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 505 SKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVD 544
++VA ++ EM + D+ + +L+ DG D
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILL----DGLCD 469
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 138/292 (47%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
A++ +I K KL A K++ G DT TY +LI F + K+ + + M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ C + T+ ++I K+ +D +LF++M R + +++L+ + G+L
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ A +++ EM +RP Y L++ G+ + AL ++++++K+ + G+Y +I
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + K+D A +F + G P TY+ ++ G + A L+ M G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDG 541
P TY ++ + +AK++ E+K GFSVD S +++ + DG
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 7/319 (2%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDS-SKDGISSFD 249
D + L KR+ P+ + L D + + L EM+Q S D ++
Sbjct: 300 DGAKLLRDMIKRK--ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT--- 354
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y +I K +L+ A + G + +T+N LI + L E++ M
Sbjct: 355 -YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
D+ TY +I + G+L+VA +LFQEM R +RP + L+D + G
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ A++I+ ++ + +Y +I A K+D A L+ + G +P+ Y ++
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ K G L A +F ME+ G P TY+ L+ H G + KL + G
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Query: 490 RPGMSTYTAILTLLASKKL 508
ST ++ +L+ +L
Sbjct: 594 SVDASTVKMVVDMLSDGRL 612
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 1/292 (0%)
Query: 303 FEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDS 362
++ + ME + + T +MI + +L +AF ++ + P FS+L++
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 363 MGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN 422
+ GR+ A+++ M G +P+ +L+ GK+ A+ L D M + GF+PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 423 YGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYN 482
Y +++ KSG+ AM + ME+ YS +++ G +D+A L+N
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 483 SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDG 541
M G + + YT ++ D AK+L +M + DV A L+ ++K+G
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 542 SVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAA 593
+ A + M GI + L + K + A +L+ V+
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 3/291 (1%)
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+A++ + D+ L ++M+ + I + S +++ + +L A ++ G P
Sbjct: 82 VARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPD 141
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+++LI G++ AL L D M + G +P +V +GK+ A+ + +
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M + GF P TY +L++ SGQ AM+L M ++ Y+ I+ L
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
+D A + EM+ GF D+ L+ + G D + LR M I +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 567 QLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNER 617
L + +K G A+ L + + D V YTS++ C+E Q ++
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF--CKENQLDK 370
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 5/285 (1%)
Query: 330 KSGRLDV----AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+SG +D+ A LFQEM RP FS L + + + D + + +M G+
Sbjct: 45 RSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIA 104
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
+ + +I + KL A ++ K G+ P+ ++ ++ G++ A+ +
Sbjct: 105 HNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALEL 164
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+ M + G PT T + L+ +G+V A+ L + M G +P TY +L ++
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 506 KKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFI 564
+A ++L +M+ +D V S ++ KDGS+D A M+ G + + I
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 565 IRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
L G ++ LL + D+V +++++ V+
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/520 (20%), Positives = 215/520 (41%), Gaps = 53/520 (10%)
Query: 151 IVEVVKRWKWGPELETHLDKLQFLPNMTHIL--QALKIVNDIDASLSLYKWAKRQSWYVP 208
I ++ W L+ + L +P H L L ++ +L ++W +R
Sbjct: 91 ICRMMDNRAWTTRLQNSIRDL--VPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRH 148
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELA 267
+ + ++ + L + + + + +M + G+ D + +I+ KA ++ +
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEK----GVPWDEDMFVVLIESYGKAGIVQES 204
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F+K++ G + ++YN+L + L +G + + M + TY LM+
Sbjct: 205 VKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWG 264
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
S RL+ A + F++MK R I P F+++++ + ++D A K+++EM+G + PS
Sbjct: 265 FFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPS 324
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y ++I+ Y ++D LR+++EM+ +G PN Y+ ++ +GK+ A +I
Sbjct: 325 VVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILK 384
Query: 448 DM--------------------EKAGFLPTPST----------------YSCLLEMHAAS 471
+M KAG + + Y L+E +
Sbjct: 385 NMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKA 444
Query: 472 GQVDSAMKLYNSMTNA--------GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
+ A+KL +++ L S Y I+ L + A + ++ G
Sbjct: 445 SAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
Query: 524 FSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKP 583
+ ++++ + K+G+ D + L+ M G+ + L +S M G AK
Sbjct: 505 VQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKT 564
Query: 584 LLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLIL 623
L++ V D L+ S++ L Q +M+I+
Sbjct: 565 ALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIM 604
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 198/462 (42%), Gaps = 63/462 (13%)
Query: 207 VP-NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKD-GIS-SFDAYNRVIQYLAKAEK 263
VP +E+ +++L ++ ++ +F +M KD G+ + +YN + + + + +
Sbjct: 181 VPWDEDMFVVLIESYGKAGIVQESVKIFQKM-----KDLGVERTIKSYNSLFKVILRRGR 235
Query: 264 LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYEL 323
+A F K+ G + TYN ++ F + +E M+ S D +T+
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
MI + ++D A KLF EMK I PS +++++ R+D ++I+ EMR G
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 384 LRPSATMYASLIESYTKAGKLDTA--------------------LRLWDEMKKAG----- 418
+ P+AT Y++L+ AGK+ A L+L KAG
Sbjct: 356 IEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA 415
Query: 419 -----------FRPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLP-------TPS 459
G Y +++E+ K+ + A+ + + + EK L PS
Sbjct: 416 TEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS 475
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL---ASKKLVDVAAKIL 516
Y+ ++E +GQ A L+ + ++ G+ A+ L+ A + D + +IL
Sbjct: 476 AYNPIIEYLCNNGQTAKAEVLFRQL----MKRGVQDQDALNNLIRGHAKEGNPDSSYEIL 531
Query: 517 LEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKN 575
M G + +A ++L+ Y+ G A L M G ++ + R + ES ++
Sbjct: 532 KIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFED 591
Query: 576 GLYESAKPLLETYV--NSAAKVDLVLYTSIL-AHLVRCQEEQ 614
G ++A ++ + N + ++ L IL A L+R E+
Sbjct: 592 GRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEE 633
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 43/289 (14%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
AYN +I+YL + A F+++ G + D N LI +G P S+EI + M
Sbjct: 476 AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIM 534
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+S+ YEL+I S G A M E P +F S+++S+ + GR+
Sbjct: 535 SRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRV 594
Query: 370 DTAMKIYMEM--RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
TA ++ M M + G+ + + A ++E+ G ++ AL D
Sbjct: 595 QTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRID--------------- 639
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
++ N + LD+ +S+ ++ G+ +A+KL +
Sbjct: 640 -LLNQNGHTADLDSLLSVLSE----------------------KGKTIAALKLLDFGLER 676
Query: 488 GLRPGMSTYTAIL-TLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
L S+Y +L LL + K ++ A +L ++ G S D +SD L+
Sbjct: 677 DLSLEFSSYDKVLDALLGAGKTLN-AYSVLCKIMEKGSSTDWKSSDELI 724
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 176/371 (47%), Gaps = 18/371 (4%)
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVI 255
+ +W + Q+W+ +E +L+L A + +F+ + + + + S + S+ A ++
Sbjct: 132 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTA---LM 188
Query: 256 QYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM---EAA 312
+ + K A F+++Q SG + TY ++ F+ ++ E++E++ + +
Sbjct: 189 ESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKS 248
Query: 313 QCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTA 372
D Y +MI K+G + A K+F M + + S ++SL M
Sbjct: 249 PLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEV 305
Query: 373 MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
KIY +M+ ++P YA LI++Y +A + + AL +++EM AG RP + Y +++++
Sbjct: 306 SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA 365
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
A SG ++ A ++F M + P +Y+ +L + + ++ A K + + G P
Sbjct: 366 FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 425
Query: 493 MSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGS-----VDLAL 547
+ TY ++ A V+ ++ +M+ G + A+ ++ I D S AL
Sbjct: 426 IVTYGTLIKGYAKANDVEKMMEVYEKMRLSG----IKANQTILTTIMDASGRCKNFGSAL 481
Query: 548 RWLRFMDSSGI 558
W + M+S G+
Sbjct: 482 GWYKEMESCGV 492
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 142/309 (45%), Gaps = 5/309 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ Y ++ + F + +F+ ++ + Y+ +I KA E A
Sbjct: 214 PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 273
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSF-EIYESMEAAQCSLDSSTYELMIP 326
F + G G T TYN+L++ + YK +IY+ M+ + D +Y L+I
Sbjct: 274 RKVFSSMVGKGVPQSTVTYNSLMSFETS----YKEVSKIYDQMQRSDIQPDVVSYALLIK 329
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+ ++ R + A +F+EM + +RP+ ++ L+D+ +G ++ A ++ MR + P
Sbjct: 330 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFP 389
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
Y +++ +Y A ++ A + + +K GF PN Y +++ AK+ ++ M ++
Sbjct: 390 DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVY 449
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
M +G + + +++ SA+ Y M + G+ P +L+L +++
Sbjct: 450 EKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQ 509
Query: 507 KLVDVAAKI 515
++ A ++
Sbjct: 510 DELEEAKEL 518
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 7/261 (2%)
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
F L+ + GK G + A ++ + G P+ Y +L+ESY + GK + A ++ M+
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN---DMEKAGFLPTPSTYSCLLEMHAASG 472
+G P+ Y +I+++ + K A +F D +K+ P Y ++ M+ +G
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 473 QVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASD 532
+ A K+++SM G+ TY ++++ S K V +KI +M+ DV +
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPDVVSYA 325
Query: 533 VLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNS 591
+L+ Y + + AL M +G+R + L ++ +G+ E AK + ++
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 592 AAKVDLVLYTSILAHLVRCQE 612
DL YT++L+ V +
Sbjct: 386 RIFPDLWSYTTMLSAYVNASD 406
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 176/371 (47%), Gaps = 18/371 (4%)
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVI 255
+ +W + Q+W+ +E +L+L A + +F+ + + + + S + S+ A ++
Sbjct: 125 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTA---LM 181
Query: 256 QYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM---EAA 312
+ + K A F+++Q SG + TY ++ F+ ++ E++E++ + +
Sbjct: 182 ESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKS 241
Query: 313 QCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTA 372
D Y +MI K+G + A K+F M + + S ++SL M
Sbjct: 242 PLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEV 298
Query: 373 MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
KIY +M+ ++P YA LI++Y +A + + AL +++EM AG RP + Y +++++
Sbjct: 299 SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA 358
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
A SG ++ A ++F M + P +Y+ +L + + ++ A K + + G P
Sbjct: 359 FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 418
Query: 493 MSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGS-----VDLAL 547
+ TY ++ A V+ ++ +M+ G + A+ ++ I D S AL
Sbjct: 419 IVTYGTLIKGYAKANDVEKMMEVYEKMRLSG----IKANQTILTTIMDASGRCKNFGSAL 474
Query: 548 RWLRFMDSSGI 558
W + M+S G+
Sbjct: 475 GWYKEMESCGV 485
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 142/309 (45%), Gaps = 5/309 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ Y ++ + F + +F+ ++ + Y+ +I KA E A
Sbjct: 207 PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 266
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSF-EIYESMEAAQCSLDSSTYELMIP 326
F + G G T TYN+L++ + YK +IY+ M+ + D +Y L+I
Sbjct: 267 RKVFSSMVGKGVPQSTVTYNSLMSFETS----YKEVSKIYDQMQRSDIQPDVVSYALLIK 322
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+ ++ R + A +F+EM + +RP+ ++ L+D+ +G ++ A ++ MR + P
Sbjct: 323 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFP 382
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
Y +++ +Y A ++ A + + +K GF PN Y +++ AK+ ++ M ++
Sbjct: 383 DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVY 442
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
M +G + + +++ SA+ Y M + G+ P +L+L +++
Sbjct: 443 EKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQ 502
Query: 507 KLVDVAAKI 515
++ A ++
Sbjct: 503 DELEEAKEL 511
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 7/261 (2%)
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
F L+ + GK G + A ++ + G P+ Y +L+ESY + GK + A ++ M+
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN---DMEKAGFLPTPSTYSCLLEMHAASG 472
+G P+ Y +I+++ + K A +F D +K+ P Y ++ M+ +G
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 473 QVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASD 532
+ A K+++SM G+ TY ++++ S K V +KI +M+ DV +
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPDVVSYA 318
Query: 533 VLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNS 591
+L+ Y + + AL M +G+R + L ++ +G+ E AK + ++
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 592 AAKVDLVLYTSILAHLVRCQE 612
DL YT++L+ V +
Sbjct: 379 RIFPDLWSYTTMLSAYVNASD 399
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 171/385 (44%), Gaps = 41/385 (10%)
Query: 138 LKKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALK-IVNDIDASLSL 196
+KKP ++ V + K+ ++ L K + + +LQ L+ N + +
Sbjct: 95 VKKPVEDIDKVCDFLN--KKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGF 152
Query: 197 YKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQ 256
+ WA Q+ YV + Y + D L + R+FD + L +EM + + + + D ++V++
Sbjct: 153 FIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-NKNEESKLVTLDTMSKVMR 211
Query: 257 YLAKAEKLELAFCCFKKVQGS-GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCS 315
LAK+ K A F +++ S G K DT N+L+ + + S+E A
Sbjct: 212 RLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKEN----------SIEHAH-- 259
Query: 316 LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI 375
+V KLF I+P F+ L+ KA + D A +
Sbjct: 260 -------------------EVFLKLFD-----TIKPDARTFNILIHGFCKARKFDDARAM 295
Query: 376 YMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
M+ P Y S +E+Y K G + +EM++ G PN YT+++ S K
Sbjct: 296 MDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGK 355
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
S ++ A+ ++ M++ G +P YS L+ + + +G+ A +++ MTN G+R +
Sbjct: 356 SKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLV 415
Query: 496 YTAILTLLASKKLVDVAAKILLEMK 520
Y +++ ++A ++L M+
Sbjct: 416 YNTMISAALHHSRDEMALRLLKRME 440
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 142/309 (45%), Gaps = 24/309 (7%)
Query: 284 QTYNALITLF---LNKGLPYKSF-EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
TYNA++ + N L ++ E+ ++ E+ +LD T ++ LAKSG+ + A
Sbjct: 167 HTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLD--TMSKVMRRLAKSGKYNKAVD 224
Query: 340 LFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY 398
F EM K ++ +SL+D++ K ++ A ++++++ ++P A + LI +
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGF 283
Query: 399 TKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTP 458
KA K D A + D MK F P+ YT VE+ K G + +M + G P
Sbjct: 284 CKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNV 343
Query: 459 STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLE 518
TY+ ++ S QV A+ +Y M G P Y++++ +L+ AA+I +
Sbjct: 344 VTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFED 403
Query: 519 MKAMGFSVDVSASDVLMVYIKDGSVD-LALRWLRFM-DSSGIRTNNFIIRQLFESCMKNG 576
M G DV + ++ S D +ALR L+ M D G ESC N
Sbjct: 404 MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEG------------ESCSPN- 450
Query: 577 LYESAKPLL 585
E+ PLL
Sbjct: 451 -VETYAPLL 458
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 169/386 (43%), Gaps = 35/386 (9%)
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSK-----------DG 244
+ WA +Q Y + E Y + L++ R F A+ L +EM +++ +
Sbjct: 133 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQR 192
Query: 245 ISSFDAYNRVIQYLAKAEKL-----ELAFCCFKKVQGSGGKV----------------DT 283
+S D + I+ L + K E F C G V +
Sbjct: 193 FASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNL 252
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
+ + +L+ + G ++ + M A D Y ++ A +G++ A+ L ++
Sbjct: 253 RYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRD 312
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M+ R P+ ++ L+ ++ K R++ AMK+++EM + Y +L+ + K GK
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
+D + D+M K G P+ Y I+ ++ K + + + M + + P Y+
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
++ + G+V A++L+N M GL PG+ T+ ++ LAS+ + A+ EM G
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Query: 524 -FSVDVSASDVLMV--YIKDGSVDLA 546
FSV + L++ +KD +++A
Sbjct: 493 LFSVSQYGTLKLLLNTVLKDKKLEMA 518
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 112/269 (41%), Gaps = 8/269 (2%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
R+ + PN CY +L AL + + +F EM + + + ++ A ++ K
Sbjct: 314 RRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTA---LVSGFCKW 370
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
K++ + + G TY ++ K + E+ E M + D Y
Sbjct: 371 GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
++I K G + A +L+ EM+E + P F +++ + G L A + EM
Sbjct: 431 NVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVT 490
Query: 382 FGLRPSATMYASL---IESYTKAGKLDTALRLWDEM-KKAGFRPNYGLYTLIVESNAKSG 437
GL S + Y +L + + K KL+ A +W + K N +T+ + + G
Sbjct: 491 RGL-FSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKG 549
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
A S +M + F+P P T++ L++
Sbjct: 550 YEKEACSYCIEMIEMDFMPQPDTFAKLMK 578
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 123/301 (40%), Gaps = 13/301 (4%)
Query: 318 SSTYELMIPSLAKSGRLDVAF-----KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTA 372
+S Y+ + KS R+ F KL + E + G+ +++ G AG L
Sbjct: 73 NSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYR 132
Query: 373 MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG---FRPNYGLYTLI 429
++ + S +Y S+++ +K + L +EM+K P L+ ++
Sbjct: 133 FFVWAAKQPRYCH-SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE--LFVVL 189
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
V+ A + + A+ + ++M K GF P + CLL+ G V A KL+ M
Sbjct: 190 VQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRF 248
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALR 548
+ +T++L + A +L++M GF D V +++L Y G + A
Sbjct: 249 PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYD 308
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLV 608
LR M G N L ++ K E A + + D+V YT++++
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 609 R 609
+
Sbjct: 369 K 369
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 176/428 (41%), Gaps = 40/428 (9%)
Query: 181 LQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDS 240
+QA ++D+ L L+ K Y P+ Y +L D L + + + + LFDEM+
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIY-PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA-- 242
Query: 241 SKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY 300
R++ L TYN LI + G P
Sbjct: 243 -----------RRLLPSLI-------------------------TYNTLIDGYCKAGNPE 266
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV 360
KSF++ E M+A T+ ++ L K+G ++ A + +EMK+ P FS L
Sbjct: 267 KSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILF 326
Query: 361 DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFR 420
D + + A+ +Y G++ +A + L+ + K GK++ A + G
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Query: 421 PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
PN +Y +++ + G L A MEK G P Y+CL+ G++++A K
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 481 YNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKD 540
N M G+ P + TY ++ K D IL EM+ G +V + L+ +
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 541 GSVDLALRWL-RFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVL 599
GS L + + R M+ G+ I L + C G E A + + +++LV
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 600 YTSILAHL 607
Y +++ L
Sbjct: 567 YNTLIDGL 574
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 147/329 (44%), Gaps = 5/329 (1%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
+A+L +Y+ A + C +LL + + A + L EM +K + +
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM----AKGLVPNEVI 391
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN +I + L A + ++ G K D YN LI F G + + M+
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
S TY ++I + D F + +EM++ P+ + +L++ + K +L
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
A + +M G+ P +Y LI+ GK++ A R EM K G N Y ++
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ + +GKL A + ++ + G P TY+ L+ + +G V + LY M +G++
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEM 519
P + TY +++ L +K+ +++ ++ EM
Sbjct: 632 PTLKTYHLLIS-LCTKEGIELTERLFGEM 659
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 148/358 (41%), Gaps = 12/358 (3%)
Query: 248 FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYE 307
FD Y + EK E A ++ SG K++ T + L+ +G K+ EI
Sbjct: 326 FDGY-------SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 308 SMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
A + Y MI + G L A + M+++ ++P ++ L+ + G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
++ A K +M+ G+ PS Y LI Y + + D + EM+ G PN Y
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
++ K KL A + DME G P Y+ L++ + G+++ A + M
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLA 546
G+ + TY ++ L+ + A +LLE+ G DV + L+ Y G+V
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 547 LRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ M SGI+ L C K G+ + + E + K DL++Y +L
Sbjct: 619 IALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM----SLKPDLLVYNGVL 672
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 144/333 (43%), Gaps = 7/333 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ E Y +L + +FD + EM + + + S Y +I L K KL A
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS---YGTLINCLCKGSKLLEA 513
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+ ++ G + YN LI +KG +F + M L+ TY +I
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L+ +G+L A L E+ + ++P ++SL+ G AG + + +Y EM+ G++P+
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y LI TK G ++ RL+ EM +P+ +Y ++ A G ++ A ++
Sbjct: 634 LKTYHLLISLCTKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M + +TY+ L+ G++ L + M + P TY I+ K
Sbjct: 690 QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVK 749
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMVYIKD 540
A EM+ GF +DV + L+ +K+
Sbjct: 750 DYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 1/291 (0%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
+Y L+ L +S + A LF ++ I PS + L+D + K + + +++ +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
RPS MY I++ K + L L++ MK P+ +Y ++++ K ++
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
+ A +F++M LP+ TY+ L++ + +G + + K+ M + P + T+ +
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGI 558
L L +V+ A +L EMK +GF D +L Y + + AL SG+
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 559 RTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ N + L + K G E A+ +L + + V+Y +++ R
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 160/347 (46%), Gaps = 3/347 (0%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR-LDVAFKL 340
D + YNA I+ ++E+YE+M+ D+ T ++I +L K+GR +++
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
F++M E+ ++ S +F LV S G + A+ I EM G+R + +Y +L+++Y K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
+ ++ L+ EM+ G +P+ Y +++++ A+ + D ++ +ME G P +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 461 YSCLLEMHAASGQV-DSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
Y+CL+ + + ++ D A + M GL+P +YTA++ + + A EM
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 520 KAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLY 578
G V + VL + + G + + M I+ L + K GLY
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 579 ESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLILGA 625
A+ ++ + + ++ Y ++ R ++ L+ + A
Sbjct: 572 IEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA 618
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 188/448 (41%), Gaps = 38/448 (8%)
Query: 137 GLKKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVND---IDAS 193
G+ PF + A +I+E+ K K L L + + T ++AL ++ + + +
Sbjct: 163 GVHIPFESGVA-REILELAKNLKENQTLGEMLSGFERRVSDTECVEALVMMGESGFVKSC 221
Query: 194 LSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAI----------QSLFDEMVQDSSKD 243
L Y+W Q + + +LF L + R D I + D + +++
Sbjct: 222 LYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAIS 281
Query: 244 GISSFDAYNRVIQYLAKAEKLEL-----------------------AFCCFKKVQGSGGK 280
G+S+ Y+ + +K+ + + F+K+ G K
Sbjct: 282 GLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVK 341
Query: 281 VDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
+ L+ F ++GL ++ I ME ++ Y ++ + KS ++ L
Sbjct: 342 WSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGL 401
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
F EM+++ ++PS ++ L+D+ + + D + EM GL P+ Y LI +Y +
Sbjct: 402 FTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGR 461
Query: 401 AGKL-DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
K+ D A + MKK G +P+ YT ++ + + SG + A + F +M K G P+
Sbjct: 462 TKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVE 521
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
TY+ +L+ SG M+++ M ++ TY +L A + L A ++ E
Sbjct: 522 TYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF 581
Query: 520 KAMGFSVDVSASDVLMVYIKDGSVDLAL 547
MG V ++LM G D L
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKL 609
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 229 IQSLFDEMVQDSS--------KDGISSFD-AYNRVIQYLAKAEKLELAFCCFKKVQGSGG 279
++S DE +++ + K GI S YN ++ K+ +E F +++ G
Sbjct: 351 VKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL 410
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL-DVAF 338
K TYN L+ + + P + ME + +Y +I + ++ ++ D+A
Sbjct: 411 KPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAA 470
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY 398
F MK+ ++PS +++L+ + +G + A + EM G++PS Y S+++++
Sbjct: 471 DAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Query: 399 TKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTP 458
++G + +W M + + Y +++ AK G A + ++ K G P+
Sbjct: 531 RRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSV 590
Query: 459 STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL 500
TY+ L+ +A GQ +L M L+P TY+ ++
Sbjct: 591 MTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 133/299 (44%), Gaps = 4/299 (1%)
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAF 268
N Y L DA N+S + ++ LF EM K ++ YN ++ A+ + ++
Sbjct: 378 NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAAT---YNILMDAYARRMQPDIVE 434
Query: 269 CCFKKVQGSGGKVDTQTYNALITLF-LNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
++++ G + + ++Y LI+ + K + + + + M+ S +Y +I +
Sbjct: 435 TLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHA 494
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+ SG + A+ F+EM + I+PS ++S++D+ ++G M+I+ M ++ +
Sbjct: 495 YSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT 554
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y +L++ + K G A + E K G +P+ Y +++ + A+ G+ +
Sbjct: 555 RITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLK 614
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
+M P TYS ++ A + M +G P +Y + +L K
Sbjct: 615 EMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDK 673
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 163/355 (45%), Gaps = 17/355 (4%)
Query: 151 IVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNE 210
I+ +K + P+++T+ L ++ N + L+ + +I VP+
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI--------------GLVPDS 327
Query: 211 ECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCC 270
Y +L + + D + + DEMV+ + +F YN +I L K+E A
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGM---VPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
++++ G +D+ TYN LI + G K+F +++ M TY +I L +
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
+ A +LF+++ + ++P + ++L+D G +D A + EM + P
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
Y L+ GK + A L EMK+ G +P++ Y ++ +K G A + ++M
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
GF PT TY+ LL+ + + + + A +L M + G+ P S++ +++ +++
Sbjct: 565 SLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 20/414 (4%)
Query: 179 HILQALKIVNDIDAS----LSLYKWAKRQSWYVPNEECYLLLFDA-LNQSRDFDAIQSLF 233
HIL L +N I+ + +Y+ + + Y N +L + L +++ F I +F
Sbjct: 195 HILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF 254
Query: 234 DEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITL 292
GI + YN ++Q + ++E A +++ G + D QTYN +++
Sbjct: 255 ----------GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 293 FLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
N+G ++ E+ M+ DS +Y ++I + +G L++AF EM ++ + P+
Sbjct: 305 MCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
F +++L+ + +++ A + E+R G+ + Y LI Y + G A L D
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASG 472
EM G +P YT ++ + K A +F + G P + L++ H A G
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 473 QVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSAS 531
+D A L M + P TY ++ L + + A +++ EMK G D +S +
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 532 DVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
++ Y K G A M S G L + KN E A+ LL
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 2/276 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALI-TLFLNKGLPYKSFEIYES 308
+YN +I+ + LE+AF ++ G TYN LI LF+ + I E
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
E LDS TY ++I + G AF L EM I+P+ ++SL+ + + +
Sbjct: 389 REKG-IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
A +++ ++ G G++P M +L++ + G +D A L EM P+ Y
Sbjct: 448 TREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNC 507
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++ GK + A + +M++ G P +Y+ L+ ++ G A + + M + G
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
P + TY A+L L+ + ++A ++L EMK+ G
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 167/380 (43%), Gaps = 41/380 (10%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
++I++LFDE+V + S ++ +++ + ++ A CF ++ G T+T
Sbjct: 134 NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETC 193
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
N ++TL L++ R++ A+ + +M
Sbjct: 194 NHILTL-----------------------------------LSRLNRIENAWVFYADMYR 218
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
I+ + F+ +++ + K G+L A M FG++P+ Y +L++ ++ G+++
Sbjct: 219 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEG 278
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
A + EMK GF+P+ Y I+ G+ A + +M++ G +P +Y+ L+
Sbjct: 279 ARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIR 335
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSV 526
+ +G ++ A + M G+ P TY ++ L + ++ A ++ E++ G +
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395
Query: 527 DVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQL-FESCMKNGLYESAKPL 584
D ++L+ Y + G A M + GI+ F L + C KN E A L
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE-ADEL 454
Query: 585 LETYVNSAAKVDLVLYTSIL 604
E V K DLV+ +++
Sbjct: 455 FEKVVGKGMKPDLVMMNTLM 474
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 173/397 (43%), Gaps = 33/397 (8%)
Query: 199 WAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYL 258
W R+ P+ + L + + L + R FD++ + M+ S+ + Y + Q
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMI---SRGLVPDVHIYFVLFQ-- 207
Query: 259 AKAEKLELAFCCFKK------------VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY 306
CCFK+ + G K + Y I ++ +++
Sbjct: 208 ----------CCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF 257
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
E M+ + TY MI K+G + A+ L++E+ + P+ +F +LVD KA
Sbjct: 258 ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 317
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
L TA +++ M FG+ P+ +Y LI + K+G + A+ L EM+ P+ Y
Sbjct: 318 RELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTY 377
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
T+++ ++ A +F M+ P+ +TY+ L+ + ++ A+ L + MT
Sbjct: 378 TILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTA 437
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDL 545
+G+ P + T++ ++ + + + A + EM G DV L+ + K+ ++
Sbjct: 438 SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKE 497
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAK 582
ALR M +GI N+ +C+ +G ++ +
Sbjct: 498 ALRLYSDMLEAGIHPNDHTF-----ACLVDGFWKEGR 529
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 176/395 (44%), Gaps = 5/395 (1%)
Query: 188 NDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISS 247
N ++ + +++ K+ +PN Y + D ++ + L+ E++ + + +
Sbjct: 248 NKMEEAEKMFELMKKHG-VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL---VAELLPN 303
Query: 248 FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYE 307
+ ++ KA +L A F + G + YN LI G ++ +
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 308 SMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
ME+ S D TY ++I L ++ A +LFQ+MK I PS ++SL+ K
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
++ A+ + EM G+ P+ +++LI+ Y + A+ L+ EM G P+ YT
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
+++++ K + A+ +++DM +AG P T++CL++ G++ A+ Y
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLA 546
+T ++ L + A++ +M++ G + D+ S +L ++++ +
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Query: 547 LRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
+ M +GI N + + L NG +SA
Sbjct: 604 MMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 181/417 (43%), Gaps = 8/417 (1%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
VP+ Y +LF + + + L DEM K + + Y I L + K+E
Sbjct: 196 VPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIY---ILDLCRDNKMEE 252
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A F+ ++ G + TY+A+I + G +++ +Y+ + A+ + + ++
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
K+ L A LF M + + P+ +++ L+ K+G + A+ + EM L P
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
Y LI ++ A RL+ +MK P+ Y ++ K ++ A+ +
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
++M +G P T+S L++ + + +AM LY MT G+ P + TYTA++ +
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 507 KLVDVAAKILLEMKAMGFS-VDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFII 565
+ A ++ +M G D + + ++ + K+G + +A+ + + + N+
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552
Query: 566 RQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL-AHLVRCQEEQNERHLML 621
L E +NG A + D+ Y S+L HL QE++ +ML
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL---QEKRITDTMML 606
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 191/485 (39%), Gaps = 69/485 (14%)
Query: 235 EMVQDSSKDGIS---SFDAYNRVIQYLAKAEKLELAFCCFK------KVQGSGGKVDTQT 285
++ + SS+ +S +++ VI L A K LA C K K + +
Sbjct: 59 KLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRL 118
Query: 286 YNAL----------------ITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLA 329
+NAL I FL GL ++ + M +CS DS ++ L
Sbjct: 119 FNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLV 175
Query: 330 KSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
+ R D + +Q M R + P I+ L K G K+ EM G++P+
Sbjct: 176 RRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY 235
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPN--------------------YGLYTLI 429
+Y I + K++ A ++++ MKK G PN YGLY I
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 430 ---------------VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
V+ K+ +L TA S+F M K G P Y+CL+ H SG +
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMK-AMGFSVDVSASDV 533
A+ L + M + L P + TYT ++ L + V A ++ +MK F + + +
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Query: 534 LMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAA 593
+ Y K+ +++ AL M +SG+ N L + ++A L
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 594 KVDLVLYTSIL-AHLVRCQEEQNERHLMLILGATRH-KAHKFMCGLFTG--PEQRKQPVL 649
D+V YT+++ AH ++ R +L A H H F C L G E R +
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC-LVDGFWKEGRLSVAI 534
Query: 650 SFVRE 654
F +E
Sbjct: 535 DFYQE 539
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 147/350 (42%), Gaps = 15/350 (4%)
Query: 134 MVGGLKKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDAS 193
+V G K VTA + V +VK + P L + + ++L+A+ ++++++ S
Sbjct: 310 LVDGFCKARELVTARSLFVHMVK-FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME-S 367
Query: 194 LSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNR 253
L+L P+ Y +L + L LF +M ++ S YN
Sbjct: 368 LNL----------SPDVFTYTILINGLCIEDQVAEANRLFQKM---KNERIFPSSATYNS 414
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
+I K +E A ++ SG + + T++ LI + N + +Y M
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
D TY +I + K + A +L+ +M E I P+ F+ LVD K GRL A+
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAI 534
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
Y E + + LIE + G + A R + +M+ G P+ Y +++ +
Sbjct: 535 DFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH 594
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
+ ++ M + DM K G LP L + A+G V SA L NS
Sbjct: 595 LQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNS 644
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 15/321 (4%)
Query: 224 RDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
R FD+++ +F +M +D D S AY V+ L + +L LAF +K ++ G
Sbjct: 101 RPFDSLR-VFHKM-KDFDCD--PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTV 156
Query: 284 QTYNALI-TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQ 342
+ N LI L N G +I+ M C DS TY +I L + GR+D A KLF
Sbjct: 157 ASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFT 216
Query: 343 EMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAG 402
EM E++ P+ ++SL++ + + +D AM+ EM+ G+ P+ Y+SL++ K G
Sbjct: 217 EMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG 276
Query: 403 KLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYS 462
+ A+ L++ M G RPN YT ++ K K+ A+ + + M G P Y
Sbjct: 277 RSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYG 336
Query: 463 CLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV--------DVAAK 514
++ A + A + M G+ P T+ + + S ++V A
Sbjct: 337 KVISGFCAISKFREAANFLDEMILGGITPNRLTWN--IHVKTSNEVVRGLCANYPSRAFT 394
Query: 515 ILLEMKAMGFSVDVSASDVLM 535
+ L M++ G SV+V + L+
Sbjct: 395 LYLSMRSRGISVEVETLESLV 415
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 136/324 (41%), Gaps = 38/324 (11%)
Query: 301 KSFEIYESMEAAQCS---LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS 357
KS +++S A + D S++ M+ L + + A L MK N S I
Sbjct: 31 KSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILL 90
Query: 358 SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA 417
S+ G+ R +++++ +M+ F PS Y +++ + +L+ A + + M++
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI 150
Query: 418 GFRPNYGLYTLIVESNAKS-GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDS 476
G P +++++ ++ G +D + IF +M K G P TY L+ G++D
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 477 AMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV 536
A KL+ M P + TYT+++ L K
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSK----------------------------- 241
Query: 537 YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVD 596
+VD A+R+L M S GI N F L + K+G A L E + + +
Sbjct: 242 -----NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 597 LVLYTSILAHLVRCQEEQNERHLM 620
+V YT+++ L + Q+ Q L+
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELL 320
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 114/282 (40%), Gaps = 45/282 (15%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
+DA L ++ ++ P+ Y L L + D + LF EMV+ KD +
Sbjct: 173 VDAGLKIFLEMPKRGCD-PDSYTYGTLISGLCRFGRIDEAKKLFTEMVE---KDCAPTVV 228
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y +I L ++ ++ A ++++ G + + TY++L+ G ++ E++E M
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM 288
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV--------- 360
A C + TY +I L K ++ A +L M + ++P G++ ++
Sbjct: 289 MARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKF 348
Query: 361 -------DSMGKAG----RL---------------------DTAMKIYMEMRGFGLRPSA 388
D M G RL A +Y+ MR G+
Sbjct: 349 REAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEV 408
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
SL++ K G+ A++L DE+ G P+ G + L++
Sbjct: 409 ETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 163/355 (45%), Gaps = 16/355 (4%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS---- 246
+A ++ + WA R+ + Y ++ AL + + F + + MV + +
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTI 191
Query: 247 SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY 306
+ D++ RV Y+ +A +L F++ + G K T+++NAL+ + + ++
Sbjct: 192 AMDSFVRV-HYVRRAIEL------FEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF 244
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
+ + DS +Y +MI +K G ++ K+ +EM E P +S L++ +G+
Sbjct: 245 NA-KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 303
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
GR++ +++I+ ++ G P A +Y ++I ++ A D ++R + M PN Y
Sbjct: 304 GRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETY 363
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
+ +V K K+ A+ IF +M G LPT + L+ + G +AM +Y
Sbjct: 364 SKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK 423
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDG 541
AG R S Y +L L+ + + EM+ G+ DV + YI DG
Sbjct: 424 AGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYE----YIVDG 474
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 146/304 (48%), Gaps = 9/304 (2%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEEC-YLLLFDALNQSRDFDAIQSLFDEMVQ 238
+L+ L + + A+ S++ K +P + C Y ++ ++ + + ++ + EMV+
Sbjct: 227 LLRCLCERSHVSAAKSVFNAKKGN---IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVE 283
Query: 239 DS-SKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKG 297
D +S Y+ +I+ L + ++ + F ++ G D YNA+I F++
Sbjct: 284 SGFGPDCLS----YSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISAR 339
Query: 298 LPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS 357
+S Y M +C + TY ++ L K ++ A ++F+EM R + P+ G+ +
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 358 SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA 417
S + + G AM IY + R G R S + Y L++ ++ GK L +WDEM+++
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 418 GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSA 477
G+ + +Y IV+ G L+ A+ + + + GF P YS L AS + + A
Sbjct: 460 GYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELA 519
Query: 478 MKLY 481
KL+
Sbjct: 520 YKLF 523
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 167/370 (45%), Gaps = 6/370 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P + +L S+D + + + +VQ+S + Y +I AK+ K++
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVL-RLVQESGM--TADCKLYTTLISSCAKSGKVDAM 521
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F F ++ SG + + T+ ALI G K+F Y + + D + +I +
Sbjct: 522 FEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Query: 328 LAKSGRLDVAFKLFQEMKERN--IRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+SG +D AF + EMK I P +L+ + AG+++ A ++Y + +G+R
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
+ +Y + S +K+G D A ++ +MK+ P+ ++ +++ + LD A I
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
D + G +YS L+ + A++LY + + LRP +ST A++T L
Sbjct: 702 LQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCE 761
Query: 506 KKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFI 564
+ A + L E+K +G + ++ S +++ + +++ + L G+ N +
Sbjct: 762 GNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIM 821
Query: 565 IRQLFESCMK 574
R + C +
Sbjct: 822 CRCITSLCKR 831
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 136/310 (43%), Gaps = 12/310 (3%)
Query: 298 LPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS 357
P ++FE++ S + S Y ++ + GR+ L +++ +R++ I+
Sbjct: 386 FPARNFELHNS--NGRSPETSDAYNRLL----RDGRIKDCISLLEDLDQRDLLDMDKIYH 439
Query: 358 SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA 417
+ S KA + A+K L P+ + + L+ + ++ A + ++++
Sbjct: 440 A---SFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQES 496
Query: 418 GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSA 477
G + LYT ++ S AKSGK+D +F+ M +G T+ L++ A +GQV A
Sbjct: 497 GMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKA 556
Query: 478 MKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD---VSASDVL 534
Y + + ++P + A+++ VD A +L EMKA +D +S ++
Sbjct: 557 FGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALM 616
Query: 535 MVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAK 594
G V+ A + + GIR + SC K+G ++ A + +
Sbjct: 617 KACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVT 676
Query: 595 VDLVLYTSIL 604
D V +++++
Sbjct: 677 PDEVFFSALI 686
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 183/382 (47%), Gaps = 14/382 (3%)
Query: 208 PNEECYLLLFDAL-NQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLE 265
PN + +L D L + R DA Q +FD+M + GIS + Y +I L + +
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDA-QKMFDDM----TGRGISPNRVTYTILISGLCQRGSAD 250
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
A F ++Q SG D+ +NAL+ F G ++FE+ E L Y +I
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L ++ R AF+L+ M ++NI+P +++ L+ + KAG+++ A+K+ M G+
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P Y ++I++ G L+ L EM + P+ +T+++ S ++G + A I
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM-----TNAGLRPGMSTYTAIL 500
F ++EK+G P+ +T++ L++ SG++ A L + M + LR S +
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFD 490
Query: 501 TLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIR 559
T++ S ++ A + L G S D+ + +VL+ + + G +D AL+ L + G+
Sbjct: 491 TMVESGSILK-AYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLS 549
Query: 560 TNNFIIRQLFESCMKNGLYESA 581
++ L + G E A
Sbjct: 550 PDSVTYNTLINGLHRVGREEEA 571
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 174/375 (46%), Gaps = 9/375 (2%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYN--RVIQYLAKAEKLELAFCCFK 272
L+ D L++ D +E+ K G S D+Y +I AK E A F
Sbjct: 97 LVIDMLSEDNGCDLYWQTLEEL-----KSGGVSVDSYCFCVLISAYAKMGMAEKAVESFG 151
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYK-SFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
+++ + D TYN ++ + + + + + +F +Y M CS + T+ +++ L K
Sbjct: 152 RMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
GR A K+F +M R I P+ ++ L+ + + G D A K++ EM+ G P + +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
+L++ + K G++ A L +K GF Y+ +++ ++ + A ++ +M K
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
P Y+ L++ + +G+++ A+KL +SM + G+ P Y A++ L + L++
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 512 AAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFE 570
+ LEM D +L+ + ++G V A ++ SG + L +
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 571 SCMKNGLYESAKPLL 585
K+G + A+ LL
Sbjct: 452 GLCKSGELKEARLLL 466
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 168/351 (47%), Gaps = 17/351 (4%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y L D L ++R + L+ M++ + K I Y +IQ L+KA K+E A
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDII---LYTILIQGLSKAGKIEDALKLLS 362
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
+ G DT YNA+I +GL + + M + D+ T+ ++I S+ ++G
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+ A ++F E+++ PS F++L+D + K+G L A + +M G RP A+++
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME-VG-RP-ASLFL 479
Query: 393 SL-------IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
L ++ ++G + A R G P+ Y +++ ++G +D A+ +
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
N ++ G P TY+ L+ G+ + A KL+ + + R + Y +++T
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDD--FRHSPAVYRSLMTWSCR 597
Query: 506 KKLVDVAAKILLE-MKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDS 555
K+ V VA + ++ +K + D +A+++ + K+G + ALR L +D+
Sbjct: 598 KRKVLVAFNLWMKYLKKISCLDDETANEIEQCF-KEGETERALRRLIELDT 647
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 115/267 (43%), Gaps = 2/267 (0%)
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
F ++D + + D + E++ G+ + + LI +Y K G + A+ + MK
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDT-AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
+ RP+ Y +I+ + A +++N+M K P T+ L++ G+
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVL 534
A K+++ MT G+ P TYT +++ L + D A K+ EM+ G D A + L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 535 M-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAA 593
+ + K G + A LR + G L + + Y A L +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 594 KVDLVLYTSILAHLVRCQEEQNERHLM 620
K D++LYT ++ L + + ++ L+
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLL 361
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 120/254 (47%), Gaps = 8/254 (3%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
+G D +YN LI F G + ++ ++ S DS TY +I L + GR +
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME-MRGFGLRPSATMYASLI 395
AFKLF + + R S ++ SL+ + ++ A ++M+ ++ T A+ I
Sbjct: 571 AFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDET--ANEI 626
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
E K G+ + ALR E+ G YT+ + +SG+ A+ +F+ + + L
Sbjct: 627 EQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKIL 686
Query: 456 PTPSTYSCLLEMHAASGQVDSAMK--LYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
TP + L+ Q+D+A++ LY N L P + Y + +LL S + +++ +
Sbjct: 687 VTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYL-LSSLLESTEKMEIVS 745
Query: 514 KILLEMKAMGFSVD 527
++ M+ G++VD
Sbjct: 746 QLTNRMERAGYNVD 759
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 203/468 (43%), Gaps = 22/468 (4%)
Query: 157 RWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLL 216
R W P+ E + L + + L+ +D +L + WA RQ Y + Y +
Sbjct: 154 RSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSM 213
Query: 217 FDALNQSRDFDAIQSLFDEMVQDSSKDGI-SSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
+ L++++ + + M + GI + +A++RV+ ++A +L A +Q
Sbjct: 214 LEVLSKTKLCQGSRRVLVLM----KRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQ 269
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
+G + + N I +F+ K+ E M+ + TY MI R++
Sbjct: 270 RAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVE 329
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM-RGFGLRPSATMYASL 394
A +L ++M + P + +++ + K R+ + +M + GL P Y +L
Sbjct: 330 EAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTL 389
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I TK D AL + ++ GFR + Y+ IV + K G++ A + N+M G
Sbjct: 390 IHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGH 449
Query: 455 LPTP-STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT-------LLASK 506
P TY+ ++ G+VD A KL M G +P +YTA+L L ++
Sbjct: 450 CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAR 509
Query: 507 KLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
++++++ + ++ +SV ++ ++G + A +R M G I
Sbjct: 510 EMMNMSEEHWWSPNSITYSV------IMHGLRREGKLSEACDVVREMVLKGFFPGPVEIN 563
Query: 567 QLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQ 614
L +S ++G A+ +E +N +++V +T+++ CQ ++
Sbjct: 564 LLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF--CQNDE 609
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 149/360 (41%), Gaps = 4/360 (1%)
Query: 235 EMVQD-SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV-DTQTYNALITL 292
E+++D SK + +Y ++ YL K +++ KK+ G V D TYN LI +
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392
Query: 293 FLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER-NIRP 351
++ + + +D Y ++ +L K GR+ A L EM + + P
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
++++V+ + G +D A K+ M G +P+ Y +L+ + GK A +
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
+ ++ + PN Y++I+ + GKL A + +M GF P P + LL+
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSAS 531
G+ A K N G + +T ++ +D A +L +M + DV
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 532 DVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVN 590
L+ + K G + A ++ M GI R + + G + +LE ++
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
++ S+++ + K + ++ + M+ G+ + ++ ++ SY++AG+L AL++ M
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
++AG PN + ++ ++ +L+ A+ M+ G +P TY+C++ + +V
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRV 328
Query: 475 DSAMKLYNSMTNAGLRPG-MSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASD 532
+ A++L M + G P +S YT + L K++V+V + K G D V+ +
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 533 VLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL-ETYVNS 591
++ + K D AL +L+ G R + + + K G AK L+ E
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 592 AAKVDLVLYTSILAHLVRCQEEQNERHLMLILGATRHK 629
D+V YT+++ R E + L+ ++ HK
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 486
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 133/307 (43%), Gaps = 3/307 (0%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D Y M+ L+K+ + ++ MK R I + FS ++ S +AG+L A+K+
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
M+ G+ P+ + + I+ + +A +L+ ALR + M+ G PN Y ++
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA-GLRPGMST 495
+++ A+ + DM G LP +Y ++ ++ L M GL P T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 496 YTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMD 554
Y ++ +L D A L + + GF +D + S ++ K+G + A + M
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 555 SSGIRTNNFII-RQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEE 613
S G + + + + G + AK LL+ K + V YT++L + R +
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 614 QNERHLM 620
R +M
Sbjct: 506 LEAREMM 512
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
N L+ G +++ + E C+++ + +I ++ LD A + +M
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 622
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
N +++LVD++GK GR+ A ++ +M G+ P+ Y ++I Y + GK+D
Sbjct: 623 INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 682
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
+ + ++M + +Y ++E GKL+ A ++ + + T L+E
Sbjct: 683 LVAILEKM--ISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALME 740
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
+ G SA K+ M N L P + + L K VD A K++L + G
Sbjct: 741 GYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 5/328 (1%)
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAF 268
N+ C L+ L +R D + E ++ S++ +S+ YN +I KA ++E A
Sbjct: 184 NKACAALVV-GLCHARKVDLAYEMVAEEIK-SARVKLSTV-VYNALISGFCKAGRIEKAE 240
Query: 269 CCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
+ G + D TYN L+ + + + ++ + M + LD+ +Y ++
Sbjct: 241 ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRH 300
Query: 329 AKSGRLDVAFK-LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+ D + + +EM+ R +S+L+++ +A A +++ EMR G+ +
Sbjct: 301 CRVSHPDKCYNFMVKEMEPRGFCDVVS-YSTLIETFCRASNTRKAYRLFEEMRQKGMVMN 359
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y SLI+++ + G A +L D+M + G P+ YT I++ KSG +D A +FN
Sbjct: 360 VVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFN 419
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
DM + P +Y+ L+ SG+V A+KL+ M P T+ I+ L K
Sbjct: 420 DMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGK 479
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLM 535
+ A K+ +M GF++D SD L+
Sbjct: 480 KLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 179/390 (45%), Gaps = 16/390 (4%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
+A+Q +FDEM S + + SFD YNR I L + + ELA + ++ G + TY
Sbjct: 27 NAVQ-VFDEMRHSSYR--VFSFD-YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTY 82
Query: 287 NALITLFLNKGL-PYKSFEIYESMEAAQCSL----DSSTYELMIPSLAKSGRLDVAFKLF 341
+ I+ GL K F++ +++ + +L D + + + L + ++ A + F
Sbjct: 83 SRFIS-----GLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTF 137
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
M +R P ++ L++ + +AG++ A++I+ M G+ P A+L+ A
Sbjct: 138 FCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHA 197
Query: 402 GKLDTALRL-WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
K+D A + +E+K A + + +Y ++ K+G+++ A ++ + M K G P T
Sbjct: 198 RKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVT 257
Query: 461 YSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL-EM 519
Y+ LL + + + A + M +G++ +Y +L D ++ EM
Sbjct: 258 YNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM 317
Query: 520 KAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYE 579
+ GF VS S ++ + + + A R M G+ N L ++ ++ G
Sbjct: 318 EPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 580 SAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
AK LL+ D + YT+IL HL +
Sbjct: 378 VAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 128/291 (43%), Gaps = 2/291 (0%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR 380
Y I +L KSG +D A ++F EM+ + R ++ + + + R + A IY +M+
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 381 GFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLD 440
G Y+ I K K D L +M+ GF P+ + + ++ + K+
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 441 TAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL 500
A+ F M + G P +Y+ L+ +G+V A++++N+M +G+ P A++
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 501 TLLASKKLVDVAAKILL-EMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGI 558
L + VD+A +++ E+K+ + + L+ + K G ++ A +M G
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 559 RTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ L N + + A+ ++ V S ++D Y +L R
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 159/399 (39%), Gaps = 40/399 (10%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y L + + FD I +L +M + I A+N + L + K+ A F
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDM---ETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
+ G + D +Y LI G + EI+ +M + S D+ ++ L +
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 333 RLDVAFKLF-QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
++D+A+++ +E+K ++ S ++++L+ KAGR++ A + M G P Y
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS-IFNDME 450
L+ Y L A + EM ++G + + Y +++ + + D + + +ME
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME 318
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
GF S YS L+E + A +L+ M G+ + TYT+++
Sbjct: 319 PRGFCDVVS-YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK--------- 368
Query: 511 VAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFE 570
++++G+ +A + L M G+ + + +
Sbjct: 369 -------------------------AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 571 SCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
K+G + A + + D + Y S+++ L R
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCR 442
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 217/487 (44%), Gaps = 18/487 (3%)
Query: 179 HILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQ 238
H+L+ LK + A+ +L+ A R Y + Y + L+++R + + + E+++
Sbjct: 12 HVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIV-ELIR 70
Query: 239 DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGS-GGKVDTQTYNALITLFLNKG 297
S++ D VI+ K + A FK+++ G + ++YN L+ F+
Sbjct: 71 --SQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAK 128
Query: 298 LPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS 357
K ++ E A + + TY ++I K + A M + +P +S
Sbjct: 129 QWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYS 188
Query: 358 SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDE-MKK 416
++++ + KAG+LD A++++ EM G+ P T Y LI+ + K TA+ LWD ++
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED 248
Query: 417 AGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDS 476
+ PN + +++ +K G++D + I+ M++ TYS L+ +G VD
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDK 308
Query: 477 AMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI--LLEMKAMGFSVDVSASDVL 534
A ++N + + TY +L + + ++ ++E K SV++ + ++L
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN---SVNIVSYNIL 365
Query: 535 MV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAA 593
+ +++G +D A R M + G + NG A +++ +S
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 594 KVDLVLYTSILAHLVRCQEEQNERHLMLILGATRH--KAHKFMCGLFTGP---EQRKQPV 648
+D+ Y SI+ L C++++ E L+ ++H + + +C G + R
Sbjct: 426 HLDVYAYASIIDCL--CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 649 LSFVREF 655
F+RE
Sbjct: 484 SFFLREM 490
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 198/454 (43%), Gaps = 23/454 (5%)
Query: 158 WKWGPELETHLDKLQFLPNM---THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYL 214
W W K F P++ + ++ L +D +L L+ + P+ CY
Sbjct: 174 WMW---------KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCYN 223
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
+L D + +D L+D +++DSS + +N +I L+K +++ ++++
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSV--YPNVKTHNIMISGLSKCGRVDDCLKIWERM 281
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
+ + + D TY++LI + G K+ ++ ++ + S+D TY M+ + G++
Sbjct: 282 KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKI 341
Query: 335 DVAFKLFQEMKERNIRPSFGI--FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+ +L++ M+ +N S I ++ L+ + + G++D A I+ M G T Y
Sbjct: 342 KESLELWRIMEHKN---SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
I G ++ AL + E++ +G + Y I++ K +L+ A ++ +M K
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G + L+ ++ A M G RP + +Y ++ L A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 513 AKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALR-WLRFMDSSGIRTNNFIIRQLFE 570
+ + EM G+ D+ +L+ + +D +DLAL W +F+ SG+ T+ + L
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL-QSGLETDVMMHNILIH 577
Query: 571 SCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
G + A ++ + +LV Y +++
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 179/436 (41%), Gaps = 28/436 (6%)
Query: 124 SVEPGVDDH-VMVGGLKKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQ 182
SV P V H +M+ GL K V KI E +K+ + +L T+ + L + ++ +
Sbjct: 250 SVYPNVKTHNIMISGLSKC-GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDK 308
Query: 183 ALKIVNDID---ASL--------------------SLYKWAKRQSWYVPNEECYLLLFDA 219
A + N++D AS+ SL W + N Y +L
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKG 368
Query: 220 LNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGG 279
L ++ D ++ M +K + Y I L + A ++V+ SGG
Sbjct: 369 LLENGKIDEATMIWRLM---PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
+D Y ++I K ++ + + M L+S +I L + RL A
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
+EM + RP+ ++ L+ + KAG+ A EM G +P Y+ L+
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
+ K+D AL LW + ++G + ++ +++ GKLD AM++ +ME
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
TY+ L+E G + A ++ M GL+P + +Y I+ L + V A + +
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDA 665
Query: 520 KAMGFSVDVSASDVLM 535
+ G V ++L+
Sbjct: 666 RNHGIFPTVYTWNILV 681
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 2/272 (0%)
Query: 236 MVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT-LFL 294
M + S G AY +I L K ++LE A K++ G ++++ NALI L
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 295 NKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
+ L SF + E M C +Y ++I L K+G+ A +EM E +P
Sbjct: 477 DSRLGEASFFLRE-MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+S L+ + + ++D A++++ + GL M+ LI GKLD A+ + M
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
+ N Y ++E K G + A I+ M K G P +Y+ +++ V
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
AM+ ++ N G+ P + T+ ++ + ++
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 193/410 (47%), Gaps = 15/410 (3%)
Query: 203 QSWYV-PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
Q W P+ E Y L +A ++ + +L D+M++ + S+ YN +I +
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRST---YNNLINACGSS 226
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
A KK+ +G D T+N +++ + + K+ +E M+ A+ D++T+
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKER--NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
++I L+K G+ A LF M+E+ RP F+S++ G ++ ++ M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
GL+P+ Y +L+ +Y G TAL + ++K+ G P+ YT ++ S +S +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
A +F M K P TY+ L++ + ++G + A++++ M G++P + ++
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV---VSV 463
Query: 500 LTLLA----SKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMD 554
TLLA SKK V+V +L ++ G +++ +A + + YI ++ A+ + M
Sbjct: 464 CTLLAACSRSKKKVNVDT-VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 555 SSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
++ ++ L + Y A L+ + + + +Y+S+L
Sbjct: 523 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 165/368 (44%), Gaps = 5/368 (1%)
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
D YN +I+ A+ ++ A F ++Q K D +TY+ALI G + + +
Sbjct: 144 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 203
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M A + STY +I + SG A ++ ++M + + P + ++V S K+GR
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL-VTHNIVLSAYKSGR 262
Query: 369 LDTAMKIYME-MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM--KKAGFRPNYGL 425
+ Y E M+G +RP T + +I +K G+ AL L++ M K+A RP+
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
+T I+ + G+++ ++F M G P +Y+ L+ +A G +A+ + +
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 486 NAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVD 544
G+ P + +YT +L + A ++ L M+ +V + L+ Y +G +
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 545 LALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
A+ R M+ GI+ N + L +C ++ + +L + ++ Y S +
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Query: 605 AHLVRCQE 612
+ E
Sbjct: 503 GSYINAAE 510
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 159/352 (45%), Gaps = 10/352 (2%)
Query: 225 DFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQ 284
+ + +++F+ MV + K I S YN ++ A A ++ +G D
Sbjct: 335 EIENCRAVFEAMVAEGLKPNIVS---YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 391
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
+Y L+ + P K+ E++ M + + TY +I + +G L A ++F++M
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 345 KERNIRPSFGIFSSLVDSMGKAGR---LDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
++ I+P+ +L+ + ++ + +DT + + RG L +A Y S I SY A
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA-AQSRGINLNTAA--YNSAIGSYINA 508
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
+L+ A+ L+ M+K + + +T+++ + + K A+S +ME T Y
Sbjct: 509 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 568
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
S +L ++ GQV A ++N M AG P + YT++L + + A ++ LEM+A
Sbjct: 569 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Query: 522 MGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESC 572
G D A LM + K G + M I + ++F +C
Sbjct: 629 NGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 680
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 167/367 (45%), Gaps = 6/367 (1%)
Query: 254 VIQYLAKAEKLELAFCCFK--KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
+I+ L++ +EL FK K+Q + YN +I L ++ ++ M+
Sbjct: 113 LIRELSRRGCIELCVNVFKWMKIQKNYC-ARNDIYNMMIRLHARHNWVDQARGLFFEMQK 171
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
C D+ TY+ +I + ++G+ A L +M I PS +++L+++ G +G
Sbjct: 172 WSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 231
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
A+++ +M G+ P + ++ +Y + AL ++ MK A RP+ + +I+
Sbjct: 232 ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 291
Query: 432 SNAKSGKLDTAMSIFNDM--EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+K G+ A+ +FN M ++A P T++ ++ +++ G++++ ++ +M GL
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 351
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALR 548
+P + +Y A++ A + A +L ++K G D VS + +L Y + A
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLV 608
M + N L ++ NG A + K ++V ++LA
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 609 RCQEEQN 615
R +++ N
Sbjct: 472 RSKKKVN 478
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 144/315 (45%), Gaps = 6/315 (1%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMK-ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
+ ++I L++ G +++ +F+ MK ++N I++ ++ + +D A ++ E
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFE 168
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
M+ + +P A Y +LI ++ +AG+ A+ L D+M +A P+ Y ++ + SG
Sbjct: 169 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
A+ + M G P T++ +L + + Q A+ + M A +RP +T+
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 499 ILTLLA----SKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMD 554
I+ L+ S + +D+ + E +A V+ + ++ +Y G ++ M
Sbjct: 289 IIYCLSKLGQSSQALDLFNS-MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 555 SSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQ 614
+ G++ N L + +G+ +A +L + D+V YT +L R ++
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 615 NERHLMLILGATRHK 629
+ + L++ R K
Sbjct: 408 KAKEVFLMMRKERRK 422
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 117/288 (40%), Gaps = 35/288 (12%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
AYN I A +LE A ++ ++ K D+ T+ LI+ ++ + M
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
E L Y ++ + +K G++ A +F +MK P ++S++ + + +
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG----------- 418
A ++++EM G+ P + ++L+ ++ K G+ L D M++
Sbjct: 617 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 676
Query: 419 ----------------------FRPNY--GLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
+ P+ GL ++ KSGK++ M +F + +G
Sbjct: 677 FSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 736
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTL 502
TY+ LLE A G +++ M+ AG++P Y I++
Sbjct: 737 GINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISF 784
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 186/424 (43%), Gaps = 42/424 (9%)
Query: 214 LLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKK 273
+L+ N FD ++S+ D MV+ + IS+ N +I + E L++ C +
Sbjct: 140 ILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTV---NILIGFFGNTEDLQM---CLRL 193
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
V+ K+++ TY L+ +L K+F++Y + LD Y +++ +LAK +
Sbjct: 194 VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK 253
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
A ++F++MK+R+ R ++ ++ +MG+ G+ D A+ ++ EM GL + Y +
Sbjct: 254 ---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPN------------------------------- 422
L++ K +D A++++ M + G RPN
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM 370
Query: 423 -YGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLY 481
G+Y+ +V + +K G + A +F DM +Y +LE +G+ A+++
Sbjct: 371 TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEML 430
Query: 482 NSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKD 540
+ + G+ Y + + L K + + +MK G S D+ ++L+ + +
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 541 GSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLY 600
G VD A+ ++ S + + L KNG + A + D+V Y
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 550
Query: 601 TSIL 604
++++
Sbjct: 551 STLM 554
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 170/351 (48%), Gaps = 7/351 (1%)
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAF 268
+E Y ++ + + D LF+EM+ + + YN ++Q LAK + ++ A
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV---GYNTLMQVLAKGKMVDKAI 325
Query: 269 CCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
F ++ +G + + TY+ L+ L + +G + + +E ++ + Y ++ +L
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLNLLVAEG---QLVRLDGVVEISKRYMTQGIYSYLVRTL 382
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
+K G + A +LF +M ++ + S+++S+ AG+ A+++ ++ G+
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
MY ++ + K ++ L+++MKK G P+ Y +++ S + G++D A++IF +
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
+E++ P +Y+ L+ +G VD A + M GL P + TY+ ++ +
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 509 VDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGI 558
V++A + EM G ++ ++L+ + K+G A+ M G+
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 114/223 (51%)
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
D+Y +++ L A K A K+ G DT YN + + +++E
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M+ S D TY ++I S + G +D A +F+E++ + +P ++SL++ +GK G
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
+D A + EM+ GL P Y++L+E + K +++ A L++EM G +PN Y +
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
+++ K+G+ A+ +++ M++ G P TY+ L + + S
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVS 630
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 6/292 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PNE Y LL + L + + E+ + GI S+ +++ L+K + A
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY-----LVRTLSKLGHVSEA 391
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F + K + +Y +++ G ++ E+ + D+ Y + +
Sbjct: 392 HRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA 451
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L K ++ LF++MK+ P ++ L+ S G+ G +D A+ I+ E+ +P
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y SLI K G +D A + EM++ G P+ Y+ ++E K+ +++ A S+F
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE 571
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
+M G P TY+ LL+ +G+ A+ LY+ M GL P TYT +
Sbjct: 572 EMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 149/332 (44%), Gaps = 15/332 (4%)
Query: 286 YNALITLFLNKGLPYKSFE----IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
YN +I + LP + F+ I +SM + + ST ++I + L + +L
Sbjct: 136 YNRIILILSRSNLPDR-FDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL- 193
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+K+ +++ + + L+ + ++ A +Y E+R G + Y L+++ K
Sbjct: 194 --VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD 251
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
K A +++++MKK R + YT+++ + + GK D A+ +FN+M G Y
Sbjct: 252 EK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL-ASKKLVDVAAKILLEMK 520
+ L+++ A VD A+++++ M G RP TY+ +L LL A +LV + + + +
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR 368
Query: 521 AMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYES 580
M + S ++ K G V A R M S ++ + ES G
Sbjct: 369 YMTQGI---YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE 425
Query: 581 AKPLLETYVNSAAKVDLVLYTSILAHLVRCQE 612
A +L D ++Y ++ + L + ++
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQ 457
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 199/444 (44%), Gaps = 14/444 (3%)
Query: 162 PELETHLDK--LQFLPNMTHILQALKIVNDI-DASLSLYKWAKRQSWYVPNEECYLLLFD 218
P+LE L++ + P + I++ L D + + WA +Q Y + E +
Sbjct: 82 PKLELALNESGIDLRPGL--IIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVM 139
Query: 219 ALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSG 278
L++ R F A+ L +EM + + + + + + +++ A A ++ A ++ G
Sbjct: 140 ILSKMRQFGAVWGLIEEMRKTNPE--LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYG 197
Query: 279 GKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAF 338
+ D + L+ G ++ +++E M + + + ++ + G+L A
Sbjct: 198 LEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAK 256
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY 398
++ +MKE + P +F++L+ AG++ A + +MR G P+ Y LI++
Sbjct: 257 EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Query: 399 TKAGK-LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
+ K +D A+R++ EM++ G + YT ++ K G +D S+ +DM K G +P+
Sbjct: 317 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 376
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
TY ++ H Q + ++L M G P + Y ++ L V A ++
Sbjct: 377 QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWN 436
Query: 518 EMKAMGFSVDVSASDVLMV--YIKDGSVDLALRWLRFMDSSGIRT--NNFIIRQLFESCM 573
EM+A G S V + V+M+ + G + A + M S GI + ++ L + +
Sbjct: 437 EMEANGLSPGVD-TFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLV 495
Query: 574 KNGLYESAKPLLETYVNSAAKVDL 597
++ E AK + N + +L
Sbjct: 496 RDDKLEMAKDVWSCISNKTSSCEL 519
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 139/293 (47%), Gaps = 11/293 (3%)
Query: 320 TYEL---MIPSLAKSGRLDVAFKLFQEMKERN---IRPSFGIFSSLVDSMGKAGRLDTAM 373
+YE+ M+ L+K + + L +EM++ N I P +F L+ A + A+
Sbjct: 130 SYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPE--LFVVLMRRFASANMVKKAV 187
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
++ EM +GL P ++ L+++ K G + A +++++M++ F PN +T ++
Sbjct: 188 EVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGW 246
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
+ GKL A + M++AG P ++ LL +A +G++ A L N M G P +
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 494 STYTAILTLLA-SKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLR 551
+ YT ++ L ++K +D A ++ +EM+ G D+ L+ + K G +D L
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366
Query: 552 FMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
M G+ + Q+ + K +E L+E DL++Y ++
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 41/273 (15%)
Query: 235 EMVQDSSKDGIS-SFDAYNRVIQYLAKAEK-LELAFCCFKKVQGSGGKVDTQTYNALITL 292
+++ D K G + + Y +IQ L + EK ++ A F +++ G + D TY ALI+
Sbjct: 292 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 351
Query: 293 FLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
F G+ K + + + M TY ++ + K + + +L ++MK R P
Sbjct: 352 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 411
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
I++ ++ K G + A++++ EM GL P + +I +T G L A +
Sbjct: 412 LLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFK 471
Query: 413 EMKKAGF--RPNYGLYTLIVESNAKSGKLDTAMSIFN----------------------- 447
EM G P YG ++ + + KL+ A +++
Sbjct: 472 EMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHAL 531
Query: 448 --------------DMEKAGFLPTPSTYSCLLE 466
DM + +P P+TY+ L++
Sbjct: 532 YAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMK 564
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 172/412 (41%), Gaps = 56/412 (13%)
Query: 158 WKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLF 217
W +L HLD + + ++L LKI D SL + WAK ++ + E + ++
Sbjct: 69 WDKLNKLSDHLDSFR----VKNVL--LKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVL 122
Query: 218 DALNQSRDFDAIQSLFDEMVQDSSKD-GISSFDA--------------YNRVIQYLAKAE 262
L ++R F + +S+ +++ + D FDA ++ + + A +
Sbjct: 123 HTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLK 182
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
K A F +++ G ++ NA ++ L +G + Y M + S + T
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLN 242
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
+++ +SG+LD +L Q+M+ R + +++L+ + G L +A+K+ M
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 383 GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
GL+P+ + +LI + +A KL A +++ EMK PN Y ++ ++ G + A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 443 MSIFNDM-----------------------------------EKAGFLPTPSTYSCLLEM 467
+ DM +K +P ST+S L+
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 468 HAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
D +LY SM +G P T+ +++ + D A+++L EM
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 184/409 (44%), Gaps = 34/409 (8%)
Query: 229 IQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNA 288
IQS +D++ + S D + SF N V+ + K L L F + K + G + +A
Sbjct: 65 IQSDWDKLNKLS--DHLDSFRVKN-VLLKIQKDYLLSLEFFNWAKTRNPGSH--SLETHA 119
Query: 289 LITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM--KE 346
++ L K +KS E ++ + +G +D+ K+F +
Sbjct: 120 IVLHTLTKNRKFKS------------------AESILRDVLVNGGVDLPAKVFDALLYSY 161
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
R + +F SL + + A +M+M+ +G P+ + + S G++D
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
ALR + EM++ PN +++ +SGKLD + + DME+ GF T +Y+ L+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSV 526
H G + SA+KL N M +GL+P + T+ ++ + A+K+ EMKA+ +
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 527 D-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQL-FESCMKNGLYESAKPL 584
+ V+ + ++ Y + G ++A R+ M +GI+ + L F C + ++A+
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ-- 399
Query: 585 LETYVNSAAKVDLVLYTSILAHLV--RCQEEQNERHLMLILGATRHKAH 631
+V K +LV +S + L+ +C + +R L R H
Sbjct: 400 ---FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 112/273 (41%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N V+ ++ KL+ + ++ G + +YN LI KGL + ++ M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGK 301
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
+ + T+ +I ++ +L A K+F EMK N+ P+ +++L++ + G +
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEM 361
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
A + Y +M G++ Y +LI K K A + E+ K PN ++ ++
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
D ++ M ++G P T++ L+ + D A ++ M +
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
T + L + + K+L EM+ F
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
>AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30285358-30286704 REVERSE
Length = 448
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 169/373 (45%), Gaps = 38/373 (10%)
Query: 188 NDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSS------ 241
ND +L + W +R+S + E + + D L + +F+ +L + M+ ++
Sbjct: 59 NDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHV 118
Query: 242 ---------------KDGISSFDA------------YNRVIQYLAKAEKLELAFCCF-KK 273
++ I ++D YN V +E CF K
Sbjct: 119 TFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKN 178
Query: 274 VQGSGGKV-DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
V G+G V +T+ +N ++ + G K E ++ M+ + D +Y + + + KSG
Sbjct: 179 VIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSG 238
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+ A KL++EMK R ++ +++++ ++G + ++ ++++ EMR G P+ +
Sbjct: 239 KPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHN 298
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
++I+ + G++ A R+ DEM K G +P+ Y + K ++ +S+F M ++
Sbjct: 299 TIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRS 355
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G P TY L+ G + + ++ +M +G P + Y A++ L K ++D+A
Sbjct: 356 GVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMA 415
Query: 513 AKILLEMKAMGFS 525
+ EM G S
Sbjct: 416 REYEEEMIERGLS 428
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
+KK+ G D +Y+ + + G P+K+ ++Y+ M++ + LD Y +I ++
Sbjct: 212 WKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGA 271
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM--RGF------ 382
S ++ ++F+EM+ER P+ ++++ + + GR+ A ++ EM RG
Sbjct: 272 SQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSIT 331
Query: 383 ------------------------GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
G+RP Y L+ + + G L L +W MK++G
Sbjct: 332 YMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
P+ Y ++++ + G LD A +M + G P
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 141/338 (41%), Gaps = 9/338 (2%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYK-SFEIYESMEAAQCSL-DSSTYELMIPSLAKSGRL 334
SG + T+T+N +I + L K ++ S+ + M S+ + T+ ++ + +
Sbjct: 75 SGFRHTTETFNRVIDI-LGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLV 133
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM--EMRGFGLRPSATMYA 392
A + ++ + N+R F +LVD++ + + A ++ + G G S T
Sbjct: 134 QEAIDAYDKLDDFNLRDETS-FYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIH 192
Query: 393 SLI-ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
+LI ++K G W +M G + Y++ ++ KSGK A+ ++ +M+
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
Y+ ++ AS V+ ++++ M G P ++T+ I+ LL +
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 512 AAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
A ++L EM G D L ++ S L+L M SG+R L
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSL--FGRMIRSGVRPKMDTYVMLMRK 370
Query: 572 CMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+ G + + +T S D Y +++ L++
Sbjct: 371 FERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQ 408
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 193/410 (47%), Gaps = 15/410 (3%)
Query: 203 QSWYV-PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
Q W P+ E Y L +A ++ + +L D+M++ + S+ YN +I +
Sbjct: 38 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRST---YNNLINACGSS 94
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
A KK+ +G D T+N +++ + + K+ +E M+ A+ D++T+
Sbjct: 95 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 154
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKER--NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
++I L+K G+ A LF M+E+ RP F+S++ G ++ ++ M
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 214
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
GL+P+ Y +L+ +Y G TAL + ++K+ G P+ YT ++ S +S +
Sbjct: 215 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
A +F M K P TY+ L++ + ++G + A++++ M G++P + ++
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV---VSV 331
Query: 500 LTLLA----SKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMD 554
TLLA SKK V+V +L ++ G +++ +A + + YI ++ A+ + M
Sbjct: 332 CTLLAACSRSKKKVNVDT-VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 390
Query: 555 SSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
++ ++ L + Y A L+ + + + +Y+S+L
Sbjct: 391 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 440
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 159/352 (45%), Gaps = 10/352 (2%)
Query: 225 DFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQ 284
+ + +++F+ MV + K I S YN ++ A A ++ +G D
Sbjct: 203 EIENCRAVFEAMVAEGLKPNIVS---YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 259
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
+Y L+ + P K+ E++ M + + TY +I + +G L A ++F++M
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 345 KERNIRPSFGIFSSLVDSMGKAGR---LDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
++ I+P+ +L+ + ++ + +DT + + RG L +A Y S I SY A
Sbjct: 320 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA-AQSRGINLNTAA--YNSAIGSYINA 376
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
+L+ A+ L+ M+K + + +T+++ + + K A+S +ME T Y
Sbjct: 377 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 436
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
S +L ++ GQV A ++N M AG P + YT++L + + A ++ LEM+A
Sbjct: 437 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 496
Query: 522 MGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESC 572
G D A LM + K G + M I + ++F +C
Sbjct: 497 NGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 548
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 165/368 (44%), Gaps = 5/368 (1%)
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
D YN +I+ A+ ++ A F ++Q K D +TY+ALI G + + +
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 71
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M A + STY +I + SG A ++ ++M + + P + ++V S K+GR
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL-VTHNIVLSAYKSGR 130
Query: 369 LDTAMKIYME-MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM--KKAGFRPNYGL 425
+ Y E M+G +RP T + +I +K G+ AL L++ M K+A RP+
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
+T I+ + G+++ ++F M G P +Y+ L+ +A G +A+ + +
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 486 NAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVD 544
G+ P + +YT +L + A ++ L M+ +V + L+ Y +G +
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 545 LALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
A+ R M+ GI+ N + L +C ++ + +L + ++ Y S +
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Query: 605 AHLVRCQE 612
+ E
Sbjct: 371 GSYINAAE 378
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 152/333 (45%), Gaps = 3/333 (0%)
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
YN +I L ++ ++ M+ C D+ TY+ +I + ++G+ A L +M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
I PS +++L+++ G +G A+++ +M G+ P + ++ +Y +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM--EKAGFLPTPSTYSC 463
AL ++ MK A RP+ + +I+ +K G+ A+ +FN M ++A P T++
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
++ +++ G++++ ++ +M GL+P + +Y A++ A + A +L ++K G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 524 FSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAK 582
D VS + +L Y + A M + N L ++ NG A
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 583 PLLETYVNSAAKVDLVLYTSILAHLVRCQEEQN 615
+ K ++V ++LA R +++ N
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 346
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 125/279 (44%), Gaps = 5/279 (1%)
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
I++ ++ + +D A ++ EM+ + +P A Y +LI ++ +AG+ A+ L D+M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
+A P+ Y ++ + SG A+ + M G P T++ +L + + Q
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLA----SKKLVDVAAKILLEMKAMGFSVDVSA 530
A+ + M A +RP +T+ I+ L+ S + +D+ + E +A V+
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS-MREKRAECRPDVVTF 191
Query: 531 SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVN 590
+ ++ +Y G ++ M + G++ N L + +G+ +A +L
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 591 SAAKVDLVLYTSILAHLVRCQEEQNERHLMLILGATRHK 629
+ D+V YT +L R ++ + + L++ R K
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK 290
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 125/305 (40%), Gaps = 36/305 (11%)
Query: 234 DEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITL 292
D ++ + GI+ + AYN I A +LE A ++ ++ K D+ T+ LI+
Sbjct: 348 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 407
Query: 293 FLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
++ + ME L Y ++ + +K G++ A +F +MK P
Sbjct: 408 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 467
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
++S++ + + + A ++++EM G+ P + ++L+ ++ K G+ L D
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 527
Query: 413 EMKKAG---------------------------------FRPNY--GLYTLIVESNAKSG 437
M++ + P+ GL ++ KSG
Sbjct: 528 LMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSG 587
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
K++ M +F + +G TY+ LLE A G +++ M+ AG++P Y
Sbjct: 588 KVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYR 647
Query: 498 AILTL 502
I++
Sbjct: 648 DIISF 652
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 177/377 (46%), Gaps = 18/377 (4%)
Query: 147 AVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWY 206
AVA + ++V+R P+L T+ + L I AL ++N ++A+
Sbjct: 207 AVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA-----------RI 254
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
N + + D+L + R + LF EM + + + YN +I L +
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT---YNSLINCLCNYGRWSD 311
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A + + T+NALI F +G ++ +++E M D+ TY L+I
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
RLD A ++F+ M ++ P+ +++L++ K R++ ++++ EM GL
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
+ Y ++I+ + +AG D+A ++ +M + Y++++ GKLDTA+ IF
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
++K+ Y+ ++E +G+V A L+ S++ ++P + TY +++ L SK
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSK 548
Query: 507 KLVDVAAKILLEMKAMG 523
+L+ A + +MK G
Sbjct: 549 RLLQEADDLFRKMKEDG 565
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 153/334 (45%), Gaps = 3/334 (0%)
Query: 278 GGKVDTQTYNALI-TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
G K DT T+ LI LFL+ ++ + + M C D TY ++ L K G +D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNK-ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
A L +M+ I+ + IF++++DS+ K ++ A+ ++ EM G+RP+ Y SLI
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
G+ A RL M + PN + ++++ K GKL A + +M + P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 457 TPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
TY+ L+ ++D A +++ M + P + TY ++ K V+ ++
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 517 LEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKN 575
EM G + V+ + ++ + + G D A + M S+ + T+ L
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 576 GLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
G ++A + + S ++++ +Y +++ + +
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 163/384 (42%), Gaps = 15/384 (3%)
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
DA+ LF +MV+ I F N+++ +AK K EL +++Q G D TY
Sbjct: 66 DAVD-LFGDMVKSRPFPSIVEF---NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
+ I F + + + M D T ++ S R+ A L +M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+P F++L+ + + A+ + +M G +P Y +++ K G +D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
AL L ++M+ A + N ++ I++S K ++ A+ +F +ME G P TY+ L+
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL-TLLASKKLVDVAAKILLEMKAMGFS 525
G+ A +L ++M + P + T+ A++ KLV+ A K+ EM
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE-AEKLHEEMIQRSID 360
Query: 526 VDVSASDVLMV-YIKDGSVDLALRWLRFMDSS----GIRTNNFIIRQLFESCMKNGLYES 580
D ++L+ + +D A + +FM S I+T N +I F C + E
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING-FCKCKR---VED 416
Query: 581 AKPLLETYVNSAAKVDLVLYTSIL 604
L + V YT+I+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTII 440
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 126/270 (46%), Gaps = 7/270 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ Y LL + D + +F MV SKD + + YN +I K +++E
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMV---SKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F+++ G +T TY +I F G + +++ M + + D TY +++
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L G+LD A +F+ +++ + + I++++++ M KAG++ A ++ + ++P
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPD 534
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y ++I L A L+ +MK+ G PN G Y ++ +N + + +
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSA 477
+M +GF+ ST S + M G++D +
Sbjct: 595 EMRSSGFVGDASTISLVTNM-LHDGRLDKS 623
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 128/302 (42%), Gaps = 8/302 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDS-SKDGISSFDAYNRVIQYLAKAEKLEL 266
PN + L DA + + L +EM+Q S D I+ YN +I +L+
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT----YNLLINGFCMHNRLDE 381
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A FK + + QTYN LI F E++ M ++ TY +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
++G D A +F++M + +S L+ + G+LDTA+ I+ ++ +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
+ +Y ++IE KAGK+ A WD +P+ Y ++ L A +F
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
M++ G LP TY+ L+ + ++ +L M ++G ST + + +L
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
Query: 507 KL 508
+L
Sbjct: 619 RL 620
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/467 (19%), Positives = 210/467 (44%), Gaps = 17/467 (3%)
Query: 106 IQYLDESGGVIYSGKGIRSVEPGVDDHVMVG---------GLKKPFMNVTAVAKIVEVVK 156
+Q LD S G G +V G D+ V + N V ++ +V+
Sbjct: 80 VQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVID 139
Query: 157 R-WKWGPELETHLDKLQFLPNMTHILQAL-KIVNDIDASLSLYKWAKRQSWYVPNEECYL 214
+ +E LD+++ + I++ L + + + + WA + + + Y
Sbjct: 140 ELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYN 199
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
+ L ++R F+ + S+ +EM G+ + + + ++ A A++ + A F+ +
Sbjct: 200 SMMSILAKTRQFETMVSVLEEM----GTKGLLTMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
+ K+ +T N L+ L ++ +++ ++ + + + TY +++ + L
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNL 314
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
A +++ +M ++ ++P + +++ + ++ + A+K++ M+ G P+ Y +
Sbjct: 315 IEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I + K ++TA+ +D+M +G +P+ +YT ++ KLDT + +M++ G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
P TY+ L+++ A + A ++YN M + P + T+ I+ + ++
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 515 ILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRT 560
+ EM G D ++ VL+ I +G A R+L M G++T
Sbjct: 495 VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKT 541
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/324 (17%), Positives = 142/324 (43%), Gaps = 5/324 (1%)
Query: 174 LPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLF 233
+ T ++A + ++ +++ K+ + + E LL D+L +++ Q LF
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLL-DSLGRAKLGKEAQVLF 287
Query: 234 DEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
D++ + + + ++ Y ++ + L A + + G K D +N ++
Sbjct: 288 DKLKERFTPNMMT----YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 343
Query: 294 LNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSF 353
L + +++ M++ + +Y +MI K ++ A + F +M + ++P
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 354 GIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDE 413
+++ L+ G +LDT ++ EM+ G P Y +LI+ + A R++++
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 414 MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQ 473
M + P+ + +I++S + + +++ +M K G P ++Y+ L+ G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523
Query: 474 VDSAMKLYNSMTNAGLRPGMSTYT 497
A + M + G++ + Y
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYN 547
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 121/300 (40%), Gaps = 42/300 (14%)
Query: 143 MNVTAVAKIVEVVKRWKWGPELETHLDKLQ--FLPNMT-------------HILQALKIV 187
+ V + +++ + R K G E + DKL+ F PNM ++++A +I
Sbjct: 262 IGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIW 321
Query: 188 ND-IDASL------------SLYKWAKRQS----WYV-------PNEECYLLLFDALNQS 223
ND ID L L + K+ ++V PN Y ++ +
Sbjct: 322 NDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQ 381
Query: 224 RDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
+ FD+MV + + Y +I +KL+ + K++Q G D
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAA---VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
+TYNALI L N+ +P + IY M + T+ +++ S + ++ +++E
Sbjct: 439 KTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEE 498
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M ++ I P ++ L+ + G+ A + EM G++ Y + + G+
Sbjct: 499 MIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 178/413 (43%), Gaps = 44/413 (10%)
Query: 163 ELETHLDKLQFLPNMTHILQAL-KIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALN 221
EL L++ P+ +++ L ++ ND + + + + WA +Q YV + Y + L
Sbjct: 73 ELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILG 132
Query: 222 QSRDFDAIQSLFDEM----------------------VQDSSKDGISSFDAYNR--VIQY 257
+ R FD +L DEM V D K I++F AY R +
Sbjct: 133 KMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGK-AINTFHAYKRFKLEMG 191
Query: 258 LAKAEKLELAFCCFKKVQGSGGKV---------DTQTYNALITLFLNK-GLPYKSFEIYE 307
+ + L A C +K V +G + D +++N ++ + N G P ++ ++
Sbjct: 192 IDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWM 251
Query: 308 SMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
M D +Y MI +K G L+ KLF MK+ I P +++++V ++ KA
Sbjct: 252 EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKAS 311
Query: 368 RLDTA---MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
+ A MK E + G+ P+ Y SLI+ KA K + A +++DEM + G P
Sbjct: 312 FVSEARNLMKTMEEEK--GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIR 369
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
Y + ++G + + M K G PT TY L+ D+ + L++ M
Sbjct: 370 TYHAFMRI-LRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEM 426
Query: 485 TNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVY 537
+ P +S+Y ++ L ++ A EMK G + + D++ +
Sbjct: 427 KEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSW 479
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLEL 266
P+ + Y + AL ++ ++L M ++ GI + YN +I+ L KA K E
Sbjct: 295 PDRKVYNAVVHALAKASFVSEARNLMKTMEEEK---GIEPNVVTYNSLIKPLCKARKTEE 351
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A F ++ G +TY+A + + L G + FE+ M C TY ++I
Sbjct: 352 AKQVFDEMLEKGLFPTIRTYHAFMRI-LRTG--EEVFELLAKMRKMGCEPTVETYIMLIR 408
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
L + D L+ EMKE+ + P + ++ + G+++ A Y EM+ G+RP
Sbjct: 409 KLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 468
Query: 387 SATMYASLIESYTKAGKLDTALRLWD 412
+ + +I+S+ +GK R+ D
Sbjct: 469 NENV-EDMIQSWF-SGKQYAEQRITD 492
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 140/275 (50%), Gaps = 2/275 (0%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D +YNALI + +++ +IY+ + + D T +++ S K+G ++ A +L+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+++ + I + +++++D K G L+ A + +MR L+PS Y L+ S K
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
G LD A RL++EM++ P+ + ++++ + K+G + +A S+ M +AG P TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
S L+ G +D A+ ++ M ++G P ++L S+ D +++ ++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 522 MGFSVDVSASDVLMVYIKDGS--VDLALRWLRFMD 554
+D + +M Y+ + S +DLA R LR D
Sbjct: 663 KDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTD 697
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 7/282 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSS---KDGISSFDAYNRVIQYLAKAEKL 264
P+ Y +L L D D L M++DSS D IS YN +I L K +L
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS----YNALIHGLCKENRL 440
Query: 265 ELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELM 324
A + + G D T N L+ L G K+ E+++ + ++ +S TY M
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
I K+G L+VA L +M+ ++PS ++ L+ S+ K G LD A +++ EM+
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
P + +I+ KAG + +A L M +AG P+ Y+ ++ K G LD A+S
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAIS 620
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
F+ M +GF P +L+ + G+ D +L + +
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
Query: 247 SFDAYNRVIQYLAKAEKLEL--AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE 304
+F+ YN I LE A ++++ + D +YN +I F K+ E
Sbjct: 139 AFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALE 198
Query: 305 IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMG 364
+ M+ + CS T+ ++I + K+G++D A +EMK + +++SL+
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 365 KAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
G LD ++ E+ G P A Y +LI + K G+L A +++ M + G RPN
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
YT +++ GK A+ + N M + P TY+ ++ G V A+++ M
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 485 TNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
RP TY +L L +K +D A+K+L M
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 175/380 (46%), Gaps = 5/380 (1%)
Query: 238 QDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKG 297
Q + G S A N ++ L ++ ELAF ++K+ + ++ + + L+ ++
Sbjct: 62 QQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMR 121
Query: 298 LPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS 357
+F + M + + + +++ L ++ A L +EM+ ++ P ++
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181
Query: 358 SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA 417
+++ + L+ A+++ EM+G G S + LI+++ KAGK+D A+ EMK
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM 241
Query: 418 GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSA 477
G + +YT ++ G+LD ++F+++ + G P TY+ L+ GQ+ A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 478 MKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVY 537
+++ M G+RP + TYT ++ L A ++L M + ++++
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 538 I-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES-CMKNGLYESAKPL-LETYVNSAAK 594
+ KDG V A+ + M R +N L C K L E++K L L +S
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 595 VDLVLYTSILAHLVRCQEEQ 614
D++ Y +++ L C+E +
Sbjct: 422 PDVISYNALIHGL--CKENR 439
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 163/363 (44%), Gaps = 18/363 (4%)
Query: 261 AEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSST 320
AE LELA + G + D+ TYN L F G+ ++E+ M S D T
Sbjct: 274 AEALELA----SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI-FSSLVDSMGKAGRLDTAMKIYMEM 379
Y +++ + G +D+ L ++M R + I S ++ + K GR+D A+ ++ +M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
+ GL P Y+ +I K GK D AL L+DEM PN + ++ + G L
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
A S+ + + +G Y+ +++ +A SG ++ A++L+ + G+ P ++T+ ++
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGI 558
+ + + A KIL +K G + V + LM Y G+ R M + GI
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 559 RTNNFIIRQLF---------ESC---MKNGLYESAKPLLETYVNSAAKVDLVLYTSILAH 606
N +F E+C ++ ++E K L + D + Y +I+ +
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQY 629
Query: 607 LVR 609
L R
Sbjct: 630 LCR 632
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 186/425 (43%), Gaps = 17/425 (4%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
+D SL + K K Q+ V + +L+ R+ D + ++ E ++D ++
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLY----HFRETDKMWDVYKE-IKDKNEH------ 188
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y+ V+ L + +KLE A + + ++N++++ + G + + ++
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 310 EAAQCSLDSSTY--ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
+C L S Y ++I L G + A +L +M + + P ++ L G
Sbjct: 249 --LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL-Y 426
+ A ++ +M GL P Y L+ + G +D L L +M GF N +
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
++++ K+G++D A+S+FN M+ G P YS ++ G+ D A+ LY+ M +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDL 545
+ P T+ A+L L K ++ A +L + + G ++D+ ++++ Y K G ++
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
AL + + +GI + L K A+ +L+ +V YT+++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 606 HLVRC 610
C
Sbjct: 547 AYANC 551
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 135/303 (44%), Gaps = 17/303 (5%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKK 273
++ L ++ D SLF++M DG+S AY+ VI L K K ++A + +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQM----KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
+ +++T+ AL+ KG+ ++ + +S+ ++ +LD Y ++I AKSG
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
++ A +LF+ + E I PS F+SL+ K + A KI ++ +GL PS Y +
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN------ 447
L+++Y G + L EMK G P Y++I + + K + +
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 448 ------DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
DME G P TY+ +++ + A M + L +TY ++
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 502 LLA 504
L
Sbjct: 664 SLC 666
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 138/345 (40%), Gaps = 20/345 (5%)
Query: 180 ILQALKIVNDIDASLSLYK--WAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMV 237
++ L + D +L LY KR +PN + L L Q +SL D ++
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKR---ILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 238 QDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKG 297
I YN VI AK+ +E A FK V +G T+N+LI +
Sbjct: 461 SSGETLDIV---LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517
Query: 298 LPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS 357
++ +I + ++ + +Y ++ + A G +L +EMK I P+ +S
Sbjct: 518 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYS 577
Query: 358 SLVDSMGKAGRLDTAMKIYME------------MRGFGLRPSATMYASLIESYTKAGKLD 405
+ + + + + + E M G+ P Y ++I+ + L
Sbjct: 578 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 637
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A + MK + Y ++++S G + A S +++ + Y+ L+
Sbjct: 638 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 697
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
+ H G + A+KL++ + + G + Y+A++ L + L++
Sbjct: 698 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 146/328 (44%), Gaps = 3/328 (0%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN + L + + + D LF M Q + AY+ +I KA L +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE---PDLIAYSTLIDGYFKAGMLGMG 340
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
F + G K+D +++ I +++ G + +Y+ M S + TY ++I
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L + GR+ AF ++ ++ +R + PS +SSL+D K G L + +Y +M G P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+Y L++ +K G + A+R +M R N ++ +++ + + D A+ +F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M G P +T++ ++ + G+++ A+ L+ M GL P Y ++
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLM 535
+ ++ M+ S D++ +V++
Sbjct: 581 KPTIGLQLFDLMQRNKISADIAVCNVVI 608
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 195/460 (42%), Gaps = 36/460 (7%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSK-DGISS- 247
+D +L ++ ++ + +P + Y +L ++L S D I FD++ + + G+S+
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220
Query: 248 ---FDAY----------------------------NRVIQYLAKAEKLELAFCCFKKVQG 276
DA N+V++ L+ +++E+A V
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLD 279
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
G + T+ LI F +G ++F++++ ME D Y +I K+G L +
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
KLF + + ++ +FSS +D K+G L TA +Y M G+ P+ Y LI+
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
+ G++ A ++ ++ K G P+ Y+ +++ K G L + +++ DM K G+ P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 457 TPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
Y L++ + G + AM+ M +R + + +++ D A K+
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 517 LEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKN 575
M G DV+ + V+ V I +G ++ AL M G+ + L ++ K+
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 576 GLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQN 615
L + + D+ + ++ L +C ++
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 152/341 (44%), Gaps = 6/341 (1%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+N +I + + + A F+ + G K D T+ ++ + + +G ++ ++ M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
D+ Y +I + K + + +LF M+ I + + ++ + K R+
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 617
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ A K + + + P Y ++I Y +LD A R+++ +K F PN T++
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ K+ +D A+ +F+ M + G P TY CL++ + S ++ + KL+ M G+
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALR 548
P + +Y+ I+ L + VD A I + DV A +L+ Y K G + A
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Query: 549 WLRFMDSSGIRTNNFIIRQLFES-----CMKNGLYESAKPL 584
M +G++ ++ + R L E M G++ KP+
Sbjct: 798 LYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVHDKPM 838
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 167/400 (41%), Gaps = 8/400 (2%)
Query: 208 PNEECYLLLFDALNQ-SRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
PN Y +L L Q R ++A ++ ++++ + I + Y+ +I K L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAF-GMYGQILKRGMEPSIVT---YSSLIDGFCKCGNLRS 444
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
F ++ + G D Y L+ +GL + M L+ + +I
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+ R D A K+F+ M I+P F++++ GRL+ A+ ++ M GL P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
A Y +LI+++ K K L+L+D M++ + + +++ K +++ A F
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
N++ + P TY+ ++ + + ++D A +++ + P T T ++ +L
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 507 KLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDL--ALRWLRFMDSSGIRTNNFI 564
+D A ++ M G + LM + SVD+ + + M GI +
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK-SVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 565 IRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ + K G + A + +++ D+V Y ++
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/497 (18%), Positives = 185/497 (37%), Gaps = 105/497 (21%)
Query: 181 LQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDS 240
L L + ++ +++L ++WA+ + + + L ++ FD +FDEM+ +
Sbjct: 74 LVLLSLESEPNSALKYFRWAEISG----KDPSFYTIAHVLIRNGMFDVADKVFDEMITNR 129
Query: 241 SKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY 300
KD F+ + + L+ C F L+ G+
Sbjct: 130 GKD----FNVLGSI-----RDRSLDADVCKF-----------------LMECCCRYGMVD 163
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSS-- 358
K+ EI+ + + M+ SL S R+D+ F ++ I PS G+ +
Sbjct: 164 KALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPS-GVSAHGF 222
Query: 359 LVDSMGKAGRLDTAM---KIYMEMRGF--------------------------------G 383
++D++ G + A+ ++ ME RGF G
Sbjct: 223 VLDALFCKGEVTKALDFHRLVME-RGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG 281
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES----------- 432
P+ + +LI + K G++D A L+ M++ G P+ Y+ +++
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 433 ------------------------NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMH 468
KSG L TA ++ M G P TY+ L++
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 469 AASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV 528
G++ A +Y + G+ P + TY++++ + + +M MG+ DV
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 529 SASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLET 587
VL+ + K G + A+R+ M IR N + L + + ++ A +
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 588 YVNSAAKVDLVLYTSIL 604
K D+ +T+++
Sbjct: 522 MGIYGIKPDVATFTTVM 538
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 200/483 (41%), Gaps = 61/483 (12%)
Query: 178 THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMV 237
H+L L N I +Y+ KR + PN Y +L AL ++ D + L EM
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDG-FEPNVFTYNVLLKALCKNNKVDGAKKLLVEM- 207
Query: 238 QDSSKDGISSFDAYNRVIQYLAKA----EKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
S+K +Y VI + + E ELA F+ V YNALI
Sbjct: 208 --SNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-FEPV--------VSVYNALIN-G 255
Query: 294 LNKGLPYK-SFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
L K YK +FE+ M S + +Y +I L SG++++AF +M +R P+
Sbjct: 256 LCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN 315
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEM-RGFGLRPSAT---------------------- 389
SSLV G A+ ++ +M RGFGL+P+
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF 375
Query: 390 -------------MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
Y SLI + K G LD A+ +W++M +G PN +YT +VE+ +
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG-LRPGMST 495
K A S+ M K P+ T++ ++ +G++D A K++ M P + T
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVT 495
Query: 496 YTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMD 554
Y +L LA ++ A + E+ G S + L+ G +AL+ + M
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 555 SSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAK--VDLVLYTSILAHLVR--C 610
G + + + + K G E A +L+ K D++ YT+++ L R C
Sbjct: 556 VDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNC 615
Query: 611 QEE 613
+E+
Sbjct: 616 RED 618
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 6/258 (2%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
T+E+MI LA G++D L Q+MK + S +F S++ + G + A++++ +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
+ FG PS +Y ++++ ++ ++ +MK+ GF PN Y +++++ K+ K+
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
D A + +M G P +Y+ ++ G V +L P +S Y A+
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNAL 252
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGI 558
+ L + A +++ EM G S +V S S ++ V G ++LA +L M G
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 559 RTNNFIIRQLFESCMKNG 576
N + + L + C G
Sbjct: 313 HPNIYTLSSLVKGCFLRG 330
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 172/417 (41%), Gaps = 53/417 (12%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
RQ VP L F ++ S F F+ M++ + DG D+ +QYL +
Sbjct: 51 RQESCVP---LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDG--QVDS----VQYLLQQ 101
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
KL+ G + ++I+++ GL ++ E++ ++ C Y
Sbjct: 102 MKLQ------------GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 149
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
++ +L R+ + + ++++MK P+ ++ L+ ++ K ++D A K+ +EM
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 382 FGLRPSATMYASLIESYTKAGKLDT------------------------------ALRLW 411
G P A Y ++I S + G + A L
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELM 269
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
EM + G PN Y+ ++ SG+++ A S M K G P T S L++
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329
Query: 472 GQVDSAMKLYNSMTNA-GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
G A+ L+N M GL+P + Y ++ S + A + M+ +G S ++
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 531 SDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLE 586
L+ + K GS+D A+ M +SG N + + E+ ++ ++ A+ L+E
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 135/313 (43%), Gaps = 6/313 (1%)
Query: 226 FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQT 285
FDA+ L+++M++ + AYN ++Q + A F ++ G + +T
Sbjct: 333 FDALD-LWNQMIRGFGLQ--PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
Y +LI F +G + I+ M + C + Y M+ +L + + A L + M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM-RGFGLRPSATMYASLIESYTKAGKL 404
+ N PS F++ + + AGRLD A K++ +M + P+ Y L++ KA ++
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
+ A L E+ G + Y ++ + +G A+ + M G P T + +
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 465 LEMHAASGQVDSAMKLYN--SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAM 522
+ + G+ + A ++ + S RP + +YT ++ L + +L M +
Sbjct: 570 ILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISA 629
Query: 523 GFSVDVSASDVLM 535
G ++ VL+
Sbjct: 630 GIVPSIATWSVLI 642
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 174/400 (43%), Gaps = 9/400 (2%)
Query: 226 FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQT 285
FD + DEM+ S+++ Y I L +++ A +++ S D +
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIY---ICALCDFGRIDDA----RELLSSMAAPDVVS 376
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
YN L+ ++ G ++ +++ + A TY +I L +SG L+ A +L +EM
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
+ I P +++LV K G L A ++Y EM G++P Y + + G D
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496
Query: 406 TALRLWDEMKKAGFR-PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
A RL +EM P+ +Y + ++ K G L A+ + + G +P TY+ +
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ + +GQ A LY+ M L P + TY ++ A ++ A + EMK G
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Query: 525 SVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKP 583
+V + L+ + K G++D A R+L M+ GI N + L +E
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVK 676
Query: 584 LLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLIL 623
L + ++ + D + ++ HL + E + L +L
Sbjct: 677 LYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLL 716
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 176/402 (43%), Gaps = 19/402 (4%)
Query: 175 PNM-THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQS---------- 223
PN+ +L +++ +I + + W +RQS + + + + + L ++
Sbjct: 85 PNLLIRVLNMIRVKPEI--AFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVA 142
Query: 224 -RDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVD 282
R D D+++ D S D + + + ++ K E F+K+ G
Sbjct: 143 ERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPS 202
Query: 283 TQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQ 342
+ N ++ + + + K+ +YE+M T+ M+ S K+G L+ K++
Sbjct: 203 VRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWL 262
Query: 343 EMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAG 402
EMK RNI S ++ L++ K G+++ A + + +MR G + + LIE Y K G
Sbjct: 263 EMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQG 322
Query: 403 KLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYS 462
D A + DEM AG P Y + + + G++D A + + M P +Y+
Sbjct: 323 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYN 378
Query: 463 CLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAM 522
L+ + G+ A L++ + + P + TY ++ L ++ A ++ EM
Sbjct: 379 TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ 438
Query: 523 GFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNF 563
DV + + ++ ++K+G++ +A M GI+ + +
Sbjct: 439 LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 6/298 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMV-QDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
P+ Y L D L +S + + Q L +EM Q D I+ Y +++ K L +
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT----YTTLVKGFVKNGNLSM 462
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAA-QCSLDSSTYELMI 325
A + ++ G K D Y L G K+F ++E M A + D + Y + I
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
L K G L A + +++ + P +++++ + G+ A +Y EM L
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
PS Y LI + KAG+L+ A + EMKK G RPN + ++ K+G +D A
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
ME+ G P +Y+ L+ + + + +KLY M + + P T+ A+ L
Sbjct: 643 LCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 13/274 (4%)
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
F++M + PS + ++ + + ++ A +Y M G+ P+ + ++++S K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
AG L+ ++W EMK+ + Y +++ +K+GK++ A DM ++GF TP +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 461 YSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMK 520
++ L+E + G D A + + M NAG+ P STY + L +D A ++L M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 521 AMGFSVDVSASDVLMV-YIKDGS-VDLALRW--LRFMD-SSGIRTNNFIIRQLFESCMKN 575
A DV + + LM YIK G V+ +L + LR D I T N +I L ES
Sbjct: 371 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES---- 422
Query: 576 GLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
G E A+ L E D++ YT+++ V+
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 1/212 (0%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D+ TY ++I ++SG D A KLF EM ++ ++P+ F +L+ + K R+ A+K+
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 377 MEM-RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
+M + +G+RP+ +YASLI++ + G+L A +L DE + + + +Y+ ++ S K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
+G+ + I +M + G P TY+ L+ +SA ++ + M GL+P + +
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 496 YTAILTLLASKKLVDVAAKILLEMKAMGFSVD 527
Y IL + K + A + +M G S D
Sbjct: 331 YNMILGVFFRIKKWEEATYLFEDMPRRGCSPD 362
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 279 GKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAF 338
GK D TYN LI G + ++++ M + T+ +I L K R+ A
Sbjct: 148 GKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEAL 207
Query: 339 KLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
K+ +M K +RP+ I++SL+ ++ + G L A K+ E ++ A +Y++LI S
Sbjct: 208 KMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
KAG+ + + +EM + G +P+ Y +++ ++A + ++M + G P
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
+Y+ +L + + + A L+ M G P +Y + L + AA IL
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILD 387
Query: 518 EMKAMGF 524
EM G+
Sbjct: 388 EMLFKGY 394
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 125/310 (40%), Gaps = 39/310 (12%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSK-DGISSFDAYNRVIQYLAKAEKLEL 266
P+ Y +L +QS FD LFDEMV+ K G++ + +I L K
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT----FGTLIHGLCK------ 199
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
D++ AL + + ++Y Y +I
Sbjct: 200 ---------------DSRVKEAL-------KMKHDMLKVYGVRPTVH------IYASLIK 231
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+L + G L AFKL E E I+ I+S+L+ S+ KAGR + I EM G +P
Sbjct: 232 ALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKP 291
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
Y LI + ++A R+ DEM + G +P+ Y +I+ + K + A +F
Sbjct: 292 DTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLF 351
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
DM + G P +Y + + Q + A + + M G +P L L
Sbjct: 352 EDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCES 411
Query: 507 KLVDVAAKIL 516
+++ +K++
Sbjct: 412 GKLEILSKVI 421
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 146/348 (41%), Gaps = 24/348 (6%)
Query: 244 GISSFDAYNRVIQYLAKAEKL---ELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY 300
G FD ++V+ +L ++ E+ FC +I F LP
Sbjct: 59 GSKMFDELDQVLLHLKTDTRIVPTEIIFC------------------NVINFFGRGKLPS 100
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV 360
++ +++ M +C + ++ +L K G L+ + + E +P ++ L+
Sbjct: 101 RALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILI 159
Query: 361 DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA-GF 419
++G D A+K++ EM ++P+ + +LI K ++ AL++ +M K G
Sbjct: 160 HGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGV 219
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMK 479
RP +Y ++++ + G+L A + ++ + + YS L+ +G+ +
Sbjct: 220 RPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSM 279
Query: 480 LYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYI 538
+ M+ G +P TY ++ + + A ++L EM G DV S + +L V+
Sbjct: 280 ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFF 339
Query: 539 KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLE 586
+ + A M G + R +F+ + +E A +L+
Sbjct: 340 RIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILD 387
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/467 (19%), Positives = 208/467 (44%), Gaps = 17/467 (3%)
Query: 106 IQYLDESGGVIYSGKGIRSVEPGVDDHVMVG---------GLKKPFMNVTAVAKIVEVVK 156
+Q LD S G G +V G D+ V + N V ++ +V+
Sbjct: 79 VQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVID 138
Query: 157 R-WKWGPELETHLDKLQFLPNMTHILQAL-KIVNDIDASLSLYKWAKRQSWYVPNEECYL 214
+ +E LD+++ + I++ L + + + + WA + + + Y
Sbjct: 139 ELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYN 198
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
+ L ++R F+ + S+ +EM G+ + + + ++ A A++ + A F+ +
Sbjct: 199 SMMSILAKTRQFETMVSVLEEM----GTKGLLTMETFTIAMKAFAAAKERKKAVGIFELM 254
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
+ K+ +T N L+ L ++ +++ ++ + + + TY +++ + L
Sbjct: 255 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNL 313
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
A +++ +M + ++P + +++ + ++ + A+K++ M+ G P+ Y +
Sbjct: 314 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 373
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I + K ++TA+ +D+M +G +P+ +YT ++ KLDT + +M++ G
Sbjct: 374 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 433
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
P TY+ L+++ A + ++YN M + P + T+ I+ + ++
Sbjct: 434 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 493
Query: 515 ILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRT 560
+ EM G D ++ VL+ I +G A R+L M G++T
Sbjct: 494 VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKT 540
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/324 (17%), Positives = 143/324 (44%), Gaps = 5/324 (1%)
Query: 174 LPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLF 233
+ T ++A + ++ +++ K+ + + E LL D+L +++ Q LF
Sbjct: 228 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLL-DSLGRAKLGKEAQVLF 286
Query: 234 DEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
D++ + + + ++ Y ++ + L A + + G K D +N ++
Sbjct: 287 DKLKERFTPNMMT----YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 294 LNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSF 353
L + +++ M++ + +Y +MI K ++ A + F +M + ++P
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Query: 354 GIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDE 413
+++ L+ G +LDT ++ EM+ G P Y +LI+ + R++++
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462
Query: 414 MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQ 473
M + P+ + +I++S + + +++++M K G P ++Y+ L+ + G+
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
Query: 474 VDSAMKLYNSMTNAGLRPGMSTYT 497
A + M + G++ + Y
Sbjct: 523 SREACRYLEEMLDKGMKTPLIDYN 546
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 119/300 (39%), Gaps = 42/300 (14%)
Query: 143 MNVTAVAKIVEVVKRWKWGPELETHLDKLQ--FLPNMT-------------HILQALKIV 187
+ V + +++ + R K G E + DKL+ F PNM ++++A +I
Sbjct: 261 IGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIW 320
Query: 188 ND-IDASL----------------SLYKWAKRQSWYV-------PNEECYLLLFDALNQS 223
ND ID L S+ K + ++V PN Y ++ +
Sbjct: 321 NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQ 380
Query: 224 RDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
+ FD+MV + + Y +I +KL+ + K++Q G D
Sbjct: 381 SSMETAIEYFDDMVDSGLQPDAA---VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 437
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
+TYNALI L N+ +P IY M + T+ +++ S + ++ ++ E
Sbjct: 438 KTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 497
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M ++ I P ++ L+ + G+ A + EM G++ Y + + G+
Sbjct: 498 MIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 182/406 (44%), Gaps = 11/406 (2%)
Query: 147 AVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVN-DIDASLSLYKWAKRQSW 205
A+ +V +V+R + PE L+ L+ + + L+ + + SL + WA+
Sbjct: 50 AINHVVNIVRR-EIHPE--RSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPS 106
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
Y P Y L +L + ++++ + +M +D S D S + +I+ K ++
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQM-KDLSLD--ISGETLCFIIEQYGKNGHVD 163
Query: 266 LAFCCFKKVQGS-GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELM 324
A F V + G + YN+L+ + + + ++ + M D TY ++
Sbjct: 164 QAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAIL 223
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
+ +G++ A + EM R P L++ + AG L++A ++ +M G
Sbjct: 224 VNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF 283
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
P + LIE+ +K+G+++ + ++ K G + Y ++ + +K GK+D A
Sbjct: 284 VPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFR 343
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA 504
+ N+ + G P PS Y+ +++ +G D A ++ M P YT ++T+
Sbjct: 344 LLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCG 403
Query: 505 -SKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSV-DLALR 548
K VD AA L+EM MG D++ +K+G DLA+R
Sbjct: 404 RGGKFVD-AANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMR 448
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 122/266 (45%), Gaps = 2/266 (0%)
Query: 318 SSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM 377
S YE + SLA + + +K+ ++MK+ ++ S +++ GK G +D A++++
Sbjct: 111 SMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFN 170
Query: 378 EM-RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+ + G + + +Y SL+ + A L M + G +P+ Y ++V +
Sbjct: 171 GVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSA 230
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
GK+ A ++M + GF P L+E +G ++SA ++ + MT G P + T+
Sbjct: 231 GKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTF 290
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDS 555
++ ++ V+ ++ +G VD+ L+ + K G +D A R L
Sbjct: 291 NILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVE 350
Query: 556 SGIRTNNFIIRQLFESCMKNGLYESA 581
G + + + + +NG+++ A
Sbjct: 351 DGHKPFPSLYAPIIKGMCRNGMFDDA 376
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 156/370 (42%), Gaps = 9/370 (2%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
+PN Y L L Q + D + +++ K + + YN +I L K K +
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT---YNNLIYGLCKNSKFQE 304
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A K+ G + D+ TYN LI + G+ + I D TY +I
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
L G + A LF E + I+P+ ++++L+ + G + A ++ EM GL P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP 424
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
+ L+ K G + A L M G+ P+ + +++ + K++ A+ I
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
+ M G P TY+ LL + + + M+ Y +M G P + T+ +L L
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 507 KLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMD-----SSGIRT 560
+ +D A +L EMK + D V+ ++ + K+G +D A R M+ SS T
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPT 604
Query: 561 NNFIIRQLFE 570
N II E
Sbjct: 605 YNIIIHAFTE 614
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 148/334 (44%), Gaps = 1/334 (0%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
G +++ Y ++ F + + +E++ M A+ SL ST+ ++ L K G +
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE 234
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
KL ++ +R + P+ ++ + + + G LD A+++ + G +P Y +LI
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIY 294
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
K K A +M G P+ Y ++ K G + A I D GF+P
Sbjct: 295 GLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP 354
Query: 457 TPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
TY L++ G+ + A+ L+N G++P + Y ++ L+++ ++ AA++
Sbjct: 355 DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 414
Query: 517 LEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKN 575
EM G +V ++L+ + K G V A ++ M S G + F L
Sbjct: 415 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474
Query: 576 GLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
E+A +L+ +++ D+ Y S+L L +
Sbjct: 475 LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 154/359 (42%), Gaps = 13/359 (3%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y +I L + A F + G G K + YN LI N+G+ ++ ++ M
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ T+ +++ L K G + A L + M + P F+ L+ ++
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ A++I M G+ P Y SL+ K K + + + M + G PN + ++
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA-G 488
+ES + KLD A+ + +M+ P T+ L++ +G +D A L+ M A
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV--YIKDGSVDLA 546
+ TY I+ K V +A K+ EM D + LMV + K G+V+L
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD-GYTYRLMVDGFCKTGNVNLG 656
Query: 547 LRW-LRFMDSSGIRTNNFIIRQLFESCMKNGLYESA--------KPLLETYVNSAAKVD 596
++ L M++ I + + R + C+++ +YE+A K L+ VN+ VD
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVD 715
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 145/322 (45%), Gaps = 4/322 (1%)
Query: 204 SWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEK 263
+ +VP++ Y L D L + + +LF+E + K + YN +I+ L+
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI---LYNTLIKGLSNQGM 406
Query: 264 LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYEL 323
+ A ++ G + QT+N L+ G + + + M + D T+ +
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
+I + +++ A ++ M + + P ++SL++ + K + + M+ Y M G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
P+ + L+ES + KLD AL L +EMK P+ + +++ K+G LD A
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 444 SIFNDMEKAGFLPTPS-TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTL 502
++F ME+A + + + TY+ ++ V A KL+ M + L P TY ++
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 503 LASKKLVDVAAKILLEMKAMGF 524
V++ K LLEM GF
Sbjct: 647 FCKTGNVNLGYKFLLEMMENGF 668
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 152/379 (40%), Gaps = 4/379 (1%)
Query: 231 SLFDEMVQDSS-KDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNAL 289
+F+ M ++ K +S++ + + Y K E +E + + G + Y
Sbjct: 25 EMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR--ENVGNHMLEGVYVGA 82
Query: 290 ITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNI 349
+ + KG ++ ++E M+ C +Y ++ L SG D A K++ M++R I
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 350 RPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALR 409
P F+ + S K R A+++ M G + Y +++ + +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 410 LWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHA 469
L+ +M +G + ++ K G + + + + K G LP TY+ ++
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 470 ASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVS 529
G++D A+++ + G +P + TY ++ L A L +M G D
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 530 ASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETY 588
+ L+ Y K G V LA R + +G + F R L + G A L
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 589 VNSAAKVDLVLYTSILAHL 607
+ K +++LY +++ L
Sbjct: 383 LGKGIKPNVILYNTLIKGL 401
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Query: 407 ALRLWDEMKK-AGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCL 464
AL +++ M+K GF+ Y ++E GK + + DM E G Y
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
++ + G+V A+ ++ M P + +Y AI+++L D A K+ + M+ G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 525 SVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTN 561
+ DV + + M + K ALR L M S G N
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMN 180
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 147/319 (46%), Gaps = 5/319 (1%)
Query: 304 EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDS 362
E+++ M SL+ T+ +++ G+L+ A + + M E + P +++++ +
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249
Query: 363 MGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN 422
M K GRL ++ ++M+ GL P+ Y +L+ Y K G L A ++ + MK+ P+
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309
Query: 423 YGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYN 482
Y +++ +G + + + + M+ P TY+ L++ G A KL
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
Query: 483 SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAM-GFSVDVSASDVLM-VYIKD 540
M N G++ T+ L L ++ + + + E+ M GFS D+ L+ Y+K
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 541 GSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLY 600
G + AL +R M GI+ N + + ++ K + A LL + VD V Y
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 601 TSILAHLVRCQEEQNERHL 619
+++ R EE+ E+ L
Sbjct: 490 GTLIMGFFR--EEKVEKAL 506
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 166/397 (41%), Gaps = 38/397 (9%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
YN +++ ++K +L ++ +G + TYN L+ + G ++F+I E M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ D TY ++I L +G + +L MK ++P +++L+D + G
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 370 DTAMKIYMEMRGFGLR------------------------------------PSATMYAS 393
A K+ +M G++ P Y +
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
LI++Y K G L AL + EM + G + N I+++ K KLD A ++ N K G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
F+ TY L+ +V+ A+++++ M + P +ST+ +++ L ++A
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 514 KILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESC 572
+ E+ G D S + +++ Y K+G V+ A + + +N+ L
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 573 MKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
K G+ E A T + +VD V Y ++++ +
Sbjct: 602 CKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAFCK 637
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 6/277 (2%)
Query: 315 SLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMK 374
S D TY +I + K G L A ++ +EM ++ I+ + ++++D++ K +LD A
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 375 IYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNA 434
+ G Y +LI + + K++ AL +WDEMKK P + ++
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 435 KSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMS 494
GK + AM F+++ ++G LP ST++ ++ + G+V+ A + YN +P
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592
Query: 495 TYTAILTLLASKKLVDVAAKI---LLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLR 551
T +L L + + + A L+E + + V+ + ++ + KD + A L
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEEREVD---TVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 552 FMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETY 588
M+ G+ + F M++G LL+ +
Sbjct: 650 EMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y+ +I+ K L A +++ G K++T T N ++ + ++ + S
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+D TY +I + +++ A +++ EMK+ I P+ F+SL+ + G+
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ AM+ + E+ GL P + + S+I Y K G+++ A ++E K F+P+ ++
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ K G + A++ FN + + + T TY+ ++ ++ A L + M GL
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 490 RPGMSTYTAILTLL 503
P TY + ++LL
Sbjct: 657 EPDRFTYNSFISLL 670
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 9/272 (3%)
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS----ATMYASLIESYTKAGKLDT 406
PS +F + + G+ A++I+ +M L+P+ T+ L+ Y + + +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVR-YPSSFSISS 187
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCLL 465
A ++D+M K G N + ++V GKL+ A+ + M + P TY+ +L
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
+ + G++ +L M GL P TY ++ + A +I+ MK
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 526 VDVSASDVLMVYIKD-GSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
D+ ++L+ + + GS+ L + M S ++ + L + C + GL A+ L
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 585 LETYVNSAAKVDLVLYTSILAHLVRCQEEQNE 616
+E N K + V + L L C+EE+ E
Sbjct: 368 MEQMENDGVKANQVTHNISLKWL--CKEEKRE 397
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 158/364 (43%), Gaps = 10/364 (2%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGG---KVDTQTYNALITLFLNKGLPYKSFEIY 306
+YN +I + + A + ++ S G K D ++N+L F + + F +Y
Sbjct: 93 SYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VY 151
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
+ CS + TY I + KSG L +A K F MK + P+ F+ L+D KA
Sbjct: 152 MGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKA 211
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
G L+ A+ +Y EMR + + Y +LI+ + K G++ A ++ M + PN +Y
Sbjct: 212 GDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVY 271
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
T I++ + G D AM M G + Y ++ +G++ A ++ M
Sbjct: 272 TTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEK 331
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDL 545
+ L P M +T ++ + A + ++ GF DV A ++ I K+G +
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
A+ + + N+ + L ++ K G + + L + D +YTS +A
Sbjct: 392 AIVYFCIE-----KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIA 446
Query: 606 HLVR 609
L +
Sbjct: 447 GLCK 450
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 162/361 (44%), Gaps = 12/361 (3%)
Query: 175 PNM---THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQS 231
PN+ T ++ D++ ++SLYK +R + N Y L D + + +
Sbjct: 196 PNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL-NVVTYTALIDGFCKKGEMQRAEE 254
Query: 232 LFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT 291
++ MV+D + + Y +I + + A K+ G ++D Y +I+
Sbjct: 255 MYSRMVEDRVE---PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311
Query: 292 LFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP 351
G ++ EI E ME + D + M+ + KSGR+ A ++ ++ ER P
Sbjct: 312 GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
S+++D + K G+L A+ +Y + + + MY LI++ K G RL+
Sbjct: 372 DVVALSTMIDGIAKNGQLHEAI-VYFCIE----KANDVMYTVLIDALCKEGDFIEVERLF 426
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
++ +AG P+ +YT + K G L A + M + G L Y+ L+ A+
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK 486
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSAS 531
G + A ++++ M N+G+ P + + ++ + + A+ +LL+M+ G VS +
Sbjct: 487 GLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDA 546
Query: 532 D 532
D
Sbjct: 547 D 547
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 163/384 (42%), Gaps = 34/384 (8%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y D +S + F M +D+ + +F +I KA LE+A
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTC---LIDGYCKAGDLEVA 217
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+K+++ ++ TY ALI F KG ++ E+Y M + +S Y +I
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+ G D A K +M + +R + ++ + G+L A +I +M L P
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRP-------------------------- 421
++ +++ +Y K+G++ A+ ++ ++ + GF P
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Query: 422 ----NYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSA 477
N +YT+++++ K G +F+ + +AG +P Y+ + G + A
Sbjct: 398 IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 478 MKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-V 536
KL M GL + YT ++ LASK L+ A ++ EM G S D + D+L+
Sbjct: 458 FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 537 YIKDGSVDLALRWLRFMDSSGIRT 560
Y K+G++ A L M G+ T
Sbjct: 518 YEKEGNMAAASDLLLDMQRRGLVT 541
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 163/367 (44%), Gaps = 12/367 (3%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
++N V+ ++ K +++ A + G + D +YN+LI G + + ES+
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 310 EAAQ---CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
A+ C D ++ + +K LD F ++ + + P+ +S+ +D+ K+
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
G L A+K + M+ L P+ + LI+ Y KAG L+ A+ L+ EM++ N Y
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
T +++ K G++ A +++ M + P Y+ +++ G D+AMK M N
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDL 545
G+R ++ Y I++ L + A +I+ +M+ D+ +M Y K G +
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
A+ + G + + + + KNG A K + V+YT ++
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKANDVMYTVLID 411
Query: 606 HLVRCQE 612
L C+E
Sbjct: 412 AL--CKE 416
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 120/276 (43%), Gaps = 5/276 (1%)
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
++ K + R P F+S+V + K G++ A I M FG P Y SLI
Sbjct: 39 LSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98
Query: 396 ESYTKAGKLDTALRLWDEMKKA-GF--RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
+ + + G + +A + + ++ + GF +P+ + + +K LD M K
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC 158
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
P TYS ++ SG++ A+K ++SM L P + T+T ++ ++VA
Sbjct: 159 CS-PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 513 AKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
+ EM+ + S++V L+ + K G + A M + N+ + + +
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 572 CMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
+ G ++A L +N ++D+ Y I++ L
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 175/404 (43%), Gaps = 17/404 (4%)
Query: 138 LKKPFMNVT--AVAKIVEVVKRWKWGPELETHLDKLQFLPN-------MTHILQALKIVN 188
++K FM T + +++++ +++ G ++ LD+L + + IL+ L N
Sbjct: 68 VRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGILRTLSFDN 127
Query: 189 DIDASLSLYK---WAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGI 245
+ YK W Q + CY LL + ++ A+ L DEM++D
Sbjct: 128 KTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTA 187
Query: 246 SSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE- 304
+F N +I +A F K + + +YNA++ L YK +
Sbjct: 188 CTF---NLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVK-QYKLIDW 243
Query: 305 IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMG 364
+YE M + D TY +++ + + G+ D ++L EM + P ++ L+ +
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 365 KAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
+ A+ + MR G+ P + +LI+ ++AGKL+ DE K G P+
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
YT+++ G+L+ A +F +M + G LP TY+ ++ +G+ A L M
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 485 TNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV 528
+ G P Y+ ++ L + V A +++ +M G V +
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHL 467
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 1/223 (0%)
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
R +A Y L++ + + G+ RL DEM K G+ + L++ + ++G +
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVV 207
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
F + + P +Y+ +L Q +Y M G P + TY ++
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFAN 267
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDL-ALRWLRFMDSSGIRTNN 562
D ++L EM GFS D+ ++L+ ++ G+ L AL L M G+
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 563 FIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
L + + G E+ K ++ V D+V YT ++
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/467 (19%), Positives = 207/467 (44%), Gaps = 17/467 (3%)
Query: 106 IQYLDESGGVIYSGKGIRSVEPGVDDHVMVG---------GLKKPFMNVTAVAKIVEVVK 156
+Q LD S G G +V G D+ V + N V ++ +V+
Sbjct: 80 VQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVID 139
Query: 157 R-WKWGPELETHLDKLQFLPNMTHILQAL-KIVNDIDASLSLYKWAKRQSWYVPNEECYL 214
+ +E LD+++ + I++ L + + + + WA + + Y
Sbjct: 140 ELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYN 199
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
+ L ++R F+ + S+ +EM G+ + + + ++ A A++ + A F+ +
Sbjct: 200 SMMSILAKTRQFETMVSVLEEM----GTKGLLTMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
+ K+ +T N L+ L ++ +++ ++ + + + TY +++ + L
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNL 314
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
A +++ +M + ++P + +++ + ++ + A+K++ M+ G P+ Y +
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I + K ++TA+ +D+M +G +P+ +YT ++ KLDT + +M++ G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
P TY+ L+++ A + ++YN M + P + T+ I+ + ++
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 494
Query: 515 ILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRT 560
+ EM G D ++ VL+ I +G A R+L M G++T
Sbjct: 495 VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKT 541
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/324 (17%), Positives = 143/324 (44%), Gaps = 5/324 (1%)
Query: 174 LPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLF 233
+ T ++A + ++ +++ K+ + + E LL D+L +++ Q LF
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLL-DSLGRAKLGKEAQVLF 287
Query: 234 DEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
D++ + + + ++ Y ++ + L A + + G K D +N ++
Sbjct: 288 DKLKERFTPNMMT----YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 294 LNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSF 353
L + +++ M++ + +Y +MI K ++ A + F +M + ++P
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 354 GIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDE 413
+++ L+ G +LDT ++ EM+ G P Y +LI+ + R++++
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 414 MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQ 473
M + P+ + +I++S + + +++++M K G P ++Y+ L+ + G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
Query: 474 VDSAMKLYNSMTNAGLRPGMSTYT 497
A + M + G++ + Y
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYN 547
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 119/300 (39%), Gaps = 42/300 (14%)
Query: 143 MNVTAVAKIVEVVKRWKWGPELETHLDKLQ--FLPNMT-------------HILQALKIV 187
+ V + +++ + R K G E + DKL+ F PNM ++++A +I
Sbjct: 262 IGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIW 321
Query: 188 ND-IDASL----------------SLYKWAKRQSWYV-------PNEECYLLLFDALNQS 223
ND ID L S+ K + ++V PN Y ++ +
Sbjct: 322 NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQ 381
Query: 224 RDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
+ FD+MV + + Y +I +KL+ + K++Q G D
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAA---VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
+TYNALI L N+ +P IY M + T+ +++ S + ++ ++ E
Sbjct: 439 KTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 498
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M ++ I P ++ L+ + G+ A + EM G++ Y + + G+
Sbjct: 499 MIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 2/322 (0%)
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
F+K+ G K + + +LI KG ++FE+ E M + T+ +I L K
Sbjct: 876 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 935
Query: 331 SGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
G + AF+LF ++ + +P+ ++S++ K +L+ A ++ M+ GL P+
Sbjct: 936 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 995
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
Y +LI + KAG A L + M GF PN Y ++S K + A + N
Sbjct: 996 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 1055
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
G TY+ L++ ++ A+ + M G M ++ +K +
Sbjct: 1056 FSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKM 1115
Query: 510 DVAAKILLEMKAMGF-SVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQL 568
+ ++ + ++G + + ++ Y K+G +DLAL++ M G ++F L
Sbjct: 1116 KESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSL 1175
Query: 569 FESCMKNGLYESAKPLLETYVN 590
K + + A L E ++
Sbjct: 1176 ISGLCKKSMVDEACKLYEAMID 1197
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 180/403 (44%), Gaps = 13/403 (3%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
+ PN + L D L + + +EMV++ K + + A +I L K E
Sbjct: 884 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA---LIDGLCKRGWTE 940
Query: 266 LAFCCFKK-VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELM 324
AF F K V+ K + TY ++I + + ++ ++ M+ + +TY +
Sbjct: 941 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 1000
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
I K+G A++L M + P+ +++ +DS+ K R A ++ + GL
Sbjct: 1001 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 1060
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
Y LI+ K ++ AL + M K GF + L +++ + + K+ +
Sbjct: 1061 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 1120
Query: 445 IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA 504
+F + G +PT TY+ ++ + G +D A+K +++M G P TY ++++ L
Sbjct: 1121 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 1180
Query: 505 SKKLVDVAAKILLEMKAMGFS-VDVSASDVLMVYIKDGSVDLALRWLRFMDSS-GIRTNN 562
K +VD A K+ M G S +V+ + Y K A+ L +D IRT
Sbjct: 1181 KKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVR 1240
Query: 563 FIIRQLFESCMKNGLYESA---KPLLETYVNSAAKVDLVLYTS 602
++R+L C + + +A + LLE +SA +V L +T+
Sbjct: 1241 TLVRKL---CSEKKVGVAALFFQKLLEK-DSSADRVTLAAFTT 1279
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 174/396 (43%), Gaps = 47/396 (11%)
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI-------- 325
+Q G + T N ++ + + GL + +++ M DSS+Y+LM+
Sbjct: 774 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833
Query: 326 ---------------------------PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSS 358
+L ++G ++ A F++M + +P+ F+S
Sbjct: 834 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 893
Query: 359 LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
L+D + K G + A ++ EM G +P+ + +LI+ K G + A RL+ ++ ++
Sbjct: 894 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953
Query: 419 -FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSA 477
++PN YT ++ K KL+ A +F+ M++ G P +TY+ L+ H +G A
Sbjct: 954 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013
Query: 478 MKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMV 536
+L N M + G P + TY A + L K A ++L + + G D V+ + ++
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073
Query: 537 YIKDGSVDLALRWLRFMDSSG----IRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSA 592
K ++ AL + M+ +G +R NN +I C + + ES + L + V+
Sbjct: 1074 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF---CRQKKMKESER-LFQLVVSLG 1129
Query: 593 AKVDLVLYTSILAHLVRCQEEQNERHLMLILGATRH 628
YTS+++ C+E + L RH
Sbjct: 1130 LIPTKETYTSMIS--CYCKEGDIDLALKYFHNMKRH 1163
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA 407
N++ + + ++ + + GRL+ A+ + M+M+ GL PS+ ++E + G ++ A
Sbjct: 743 NLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYA 802
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEM 467
++DEM G P+ Y L+V + GK+ A M + GF+P +T + +L
Sbjct: 803 ENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTA 862
Query: 468 HAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD 527
+G V+ A+ + M + G +P + +T+++ L K + A ++L EM G+ +
Sbjct: 863 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 922
Query: 528 VSASDVLMVYI-KDGSVDLALR-WLRFMDSSGIRTN 561
V L+ + K G + A R +L+ + S + N
Sbjct: 923 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 958
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 98/196 (50%)
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
M+ + ++ GRL+ A + +M+ + + PS + +++ + G ++ A ++ EM G
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
+ P ++ Y ++ + GK+ A R M + GF P+ TLI+ + ++G ++ A+
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
F M GF P ++ L++ G + A ++ M G +P + T+TA++ L
Sbjct: 874 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933
Query: 504 ASKKLVDVAAKILLEM 519
+ + A ++ L++
Sbjct: 934 CKRGWTEKAFRLFLKL 949
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 166/389 (42%), Gaps = 49/389 (12%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCC-FKK 273
+L D+L +S F++ + D M + D ++ Y+ V+ L K +L LA FK
Sbjct: 132 ILLDSLIRSGKFESALGVLDYM--EELGDCLNP-SVYDSVLIALVKKHELRLALSILFKL 188
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSF--------------EIYESMEA-AQCSLDS 318
++ S D T +I +L + ++E ++ + D+
Sbjct: 189 LEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDT 248
Query: 319 STYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
+Y + I G LD A LF+EMKER+ +Y
Sbjct: 249 WSYNICIHGFGCWGDLDAALSLFKEMKERS-------------------------SVY-- 281
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
G P Y SLI GK AL +WDE+K +G P+ Y ++++ KS +
Sbjct: 282 --GSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYR 339
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
+D AM I+ +M+ GF+P Y+CLL+ + +V A +L+ M G+R TY
Sbjct: 340 MDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSG 557
++ L + + ++K G VD ++ S V + ++G ++ A++ + M++ G
Sbjct: 400 LIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRG 459
Query: 558 IRTNNFIIRQLFESCMKNGLYESAKPLLE 586
+ I L K G ++ + L++
Sbjct: 460 FSVDLVTISSLLIGFHKQGRWDWKEKLMK 488
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 130/312 (41%), Gaps = 18/312 (5%)
Query: 157 RWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQ-SWYVPNEECYLL 215
RW W +L H+ + +PN+ L+ ++ASL + + + P++ +L
Sbjct: 479 RWDWKEKLMKHIREGNLVPNV------LRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLD 532
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
+ + D + E V D SS Y + + K ++V+
Sbjct: 533 IMSMVGSEDDGASA-----EEVSPMEDDPWSS-SPYMDQLAHQRNQPKPLFGLARGQRVE 586
Query: 276 GSGGKVDTQTYNALITLFLNKG---LPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
D N ++++L+KG L K FEI+ M L S TY M+ S K G
Sbjct: 587 AKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTD--LTSYTYNSMMSSFVKKG 644
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
A + +M E ++ ++ +GK GR D A + + G MY
Sbjct: 645 YFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYN 704
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
+LI + KA +LD A +L+D MK G P+ Y ++E N+K+GKL A M A
Sbjct: 705 TLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDA 764
Query: 453 GFLPTPSTYSCL 464
G LP T + L
Sbjct: 765 GCLPNHVTDTIL 776
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 6/255 (2%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKK------VQGSGGKVDTQTYNALITLFLNKGLPYKSF 303
+YN I L+ A FK+ V GS D TYN+LI + G +
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 304 EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSM 363
+++ ++ + D+STY ++I KS R+D A +++ EM+ P +++ L+D
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
KA ++ A +++ +M G+R S Y LI+ + G+ + L+ ++KK G +
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
++++ + GKL+ A+ + +ME GF T S LL G+ D KL
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH 489
Query: 484 MTNAGLRPGMSTYTA 498
+ L P + + A
Sbjct: 490 IREGNLVPNVLRWNA 504
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 183/430 (42%), Gaps = 28/430 (6%)
Query: 189 DIDASLSLYKWAKRQSW-----YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKD 243
D+DA+LSL+K K +S + P+ Y L L ++DE+ +
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEP 322
Query: 244 GISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSF 303
S+ Y +IQ K+ +++ A + ++Q +G DT YN L+ L ++
Sbjct: 323 DNST---YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEAC 379
Query: 304 EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSM 363
+++E M TY ++I L ++GR + F LF ++K++ FS + +
Sbjct: 380 QLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQL 439
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
+ G+L+ A+K+ EM G +SL+ + K G+ D +L +++ PN
Sbjct: 440 CREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNV 499
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
+ VE++ K + D + P+ ++ ++ M + SA ++
Sbjct: 500 LRWNAGVEASLKRPQ-------SKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEV--- 549
Query: 484 MTNAGLRPGMSTYTAILTLLASKK-----LVDVAAKILLEMKAMGFSVDVSASDVLMVYI 538
+ + + + + LA ++ L +A +E K F VD+ + L +Y+
Sbjct: 550 ---SPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDM-MNTFLSIYL 605
Query: 539 KDGSVDLALRWLRFMDSSGIRT-NNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDL 597
G + LA + + G+ ++ + S +K G +++A+ +L+ + D+
Sbjct: 606 SKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADI 665
Query: 598 VLYTSILAHL 607
Y I+ L
Sbjct: 666 ATYNVIIQGL 675
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 226 FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQT 285
F + + D+M ++ I++ YN +IQ L K + +LA ++ GG +D
Sbjct: 646 FQTARGVLDQMFENFCAADIAT---YNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVM 702
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
YN LI ++ ++++ M++ + D +Y MI +K+G+L A+K + M
Sbjct: 703 YNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAML 762
Query: 346 ERNIRPSFGIFSSLVDSMGK 365
+ P+ + +++D +GK
Sbjct: 763 DAGCLPNH-VTDTILDYLGK 781
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 180/390 (46%), Gaps = 6/390 (1%)
Query: 188 NDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISS 247
DI+A+L Y+ ++ + P+ + + L Q + ++++ EM ++S + S
Sbjct: 389 GDIEAALEYYRKIRKVGLF-PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHS 447
Query: 248 FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEI-Y 306
++Q + A F++ Q + + T A+I ++ KGL ++ + Y
Sbjct: 448 VPV---IMQMYVNEGLVVQAKALFERFQ-LDCVLSSTTLAAVIDVYAEKGLWVEAETVFY 503
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
+ D Y +MI + K+ + A LF+ MK + P ++SL +
Sbjct: 504 GKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGV 563
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
+D A +I EM G +P YA++I SY + G L A+ L++ M+K G +PN +Y
Sbjct: 564 DLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVY 623
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
++ A+SG ++ A+ F ME+ G + L++ ++ G ++ A ++Y+ M +
Sbjct: 624 GSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLA 546
+ P ++ ++L+L A +V A I ++ G +S + ++ +Y G +D A
Sbjct: 684 SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEA 743
Query: 547 LRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
+ M SG+ ++ Q+ +G
Sbjct: 744 IEVAEEMRESGLLSDCTSFNQVMACYAADG 773
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 158/358 (44%), Gaps = 33/358 (9%)
Query: 194 LSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNR 253
L ++++ + YVPN Y ++ AL ++ +D ++ + EM + + + + Y
Sbjct: 129 LRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGV---LPTNNTYGM 185
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
++ KA ++ A K + D T ++ +F N G ++ ++ A +
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGK 245
Query: 314 CSLDSSTYELMIPSLAKSGRLD--VAFKLFQEMK-----ERNIRPSFGIFSSLVDSMGKA 366
LD + I K+G V K F M+ RN F+S DS +
Sbjct: 246 VDLDLDS----IDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRK 301
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
RL + + +LI+ Y KAG+L+ A L+ EM K+G + +
Sbjct: 302 PRL------------------TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTF 343
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
++ + G L A S+ ME+ G P TY+ LL +HA +G +++A++ Y +
Sbjct: 344 NTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRK 403
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSV 543
GL P T+ A+L +L +K+V ++ EM +D + V+M +Y+ +G V
Sbjct: 404 VGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLV 461
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 151/370 (40%), Gaps = 40/370 (10%)
Query: 283 TQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQ 342
T T+N LI L+ G + ++ M + +D+ T+ MI + G L A L +
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 343 EMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAG 402
+M+E+ I P ++ L+ AG ++ A++ Y ++R GL P + +++ +
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 403 KLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYS 462
+ + EM + R + +I++ G + A ++F + L + +T +
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS-TTLA 483
Query: 463 CLLEMHAA-----------------SGQV-------------------DSAMKLYNSMTN 486
+++++A SGQ + A+ L+ M N
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDL 545
G P TY ++ +LA LVD A +IL EM G ++ Y++ G +
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
A+ M+ +G++ N + L ++G+ E A + + ++ TS++
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 606 HL--VRCQEE 613
V C EE
Sbjct: 664 AYSKVGCLEE 673
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 149/363 (41%), Gaps = 69/363 (19%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN + Q LA + ++ A ++ SG K +TY A+I ++ GL + ++YE+ME
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ Y +I A+SG ++ A + F+ M+E ++ + + +SL+ + K G L+
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 371 TAMKIYMEMRGF------------------------------GLRPSATM----YASLIE 396
A ++Y +M+ LR T +A+++
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMY 732
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM------- 449
Y G LD A+ + +EM+++G + + ++ A G+L +F++M
Sbjct: 733 LYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLL 792
Query: 450 -------------EKAGF-------LPTPSTYSCLLEMHAASGQVDSAMKLY-------N 482
+K G L T + L A + + SAM LY
Sbjct: 793 LDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQ 852
Query: 483 SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDG 541
+T+ + Y A++ ++ +D+A K + M+ G D+ L+ +Y K G
Sbjct: 853 ELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAG 912
Query: 542 SVD 544
V+
Sbjct: 913 MVE 915
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 110/250 (44%), Gaps = 19/250 (7%)
Query: 279 GKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAF 338
G D ++ ++ L+ G+ ++ E+ E M + D +++ ++ A G+L
Sbjct: 720 GTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECC 779
Query: 339 KLFQEM-KERNIRPSFGIFSSLVDSMGKAG-------RLDTAMKIYMEMRGFGLRP-SAT 389
+LF EM ER + +G F +L + K G +L TA Y E + +AT
Sbjct: 780 ELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTA---YNEAKPLATPAITAT 836
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
+++++ G AL E+ + Y ++ + + SG +D A+ + M
Sbjct: 837 LFSAM-------GLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRM 889
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
++ G P T + L+ ++ +G V+ ++++ +T L P S + A+ S
Sbjct: 890 QEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQ 949
Query: 510 DVAAKILLEM 519
D+A + EM
Sbjct: 950 DLADVVKKEM 959
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%)
Query: 291 TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
TLF GL + E + + + + + Y +I + + SG +D+A K + M+E+ +
Sbjct: 836 TLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLE 895
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
P + LV GKAG ++ +++ + L PS +++ ++ ++Y A + D A +
Sbjct: 896 PDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVV 955
Query: 411 WDEMKKA 417
EM A
Sbjct: 956 KKEMSIA 962
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 180/395 (45%), Gaps = 11/395 (2%)
Query: 216 LFDALNQ--SRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKK 273
+FD+L + +++ DA Q ++ + Q ++ S A N + L +++ + +K+
Sbjct: 150 VFDSLVRACTQNGDA-QGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKE 208
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
+ G + T+N +I F + +++ ++ M + ++ +MI K+G
Sbjct: 209 MDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGD 268
Query: 334 LDVAFKLFQEMKERN---IRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
+ A +L +M + + P+ ++S+++ KAGRLD A +I +M G+ +
Sbjct: 269 MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERT 328
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
Y +L+++Y +AG D ALRL DEM G N +Y IV G ++ AMS+ DM
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
T + ++ +G V A++ ++ L + + ++ K +
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLA 448
Query: 511 VAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLF 569
A +IL M G S+D +S ++ Y+K+G ++ AL M +N I +
Sbjct: 449 CADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIV 508
Query: 570 ESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
K G+ +A E VN+ D+V Y ++L
Sbjct: 509 NGLSKRGMAGAA----EAVVNAMEIKDIVTYNTLL 539
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/438 (21%), Positives = 187/438 (42%), Gaps = 23/438 (5%)
Query: 193 SLSLYKWAKRQSWYVPNE---ECYLLLFDALNQSRDFDAIQSLFDEMVQDSSK------- 242
+L Y W R + +E E ++ L SR FD S+ ++ +
Sbjct: 74 ALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHV 133
Query: 243 -DGI--------SSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
G+ SS D ++ +++ + + A+ ++ + G V N +
Sbjct: 134 LSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCL 193
Query: 294 LNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSF 353
LN + +++Y+ M++ + +T+ L+I S K +L A +F M + + P+
Sbjct: 194 LNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNV 253
Query: 354 GIFSSLVDSMGKAGRLDTAMKIYME---MRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
F+ ++D K G + A+++ + M G + P+A Y S+I + KAG+LD A R+
Sbjct: 254 VSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERI 313
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
+M K+G N Y +V++ ++G D A+ + ++M G + Y+ ++
Sbjct: 314 RGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFM 373
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
G ++ AM + M + ++ T ++ L V A + ++ D+
Sbjct: 374 EGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVC 433
Query: 531 SDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYV 589
+ LM +++D + A + L M G+ + L + +K G E A + + +
Sbjct: 434 HNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMI 493
Query: 590 NSAAKVDLVLYTSILAHL 607
+LV+Y SI+ L
Sbjct: 494 KMNKTSNLVIYNSIVNGL 511
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 131/300 (43%), Gaps = 4/300 (1%)
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
C ++ ++ + ++G A+++ ++ + S ++ + + +D
Sbjct: 144 CGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFW 203
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
K+Y EM G + + +I S+ K KL AL ++ M K G PN + ++++
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 434 AKSGKLDTAMSIFNDME--KAGFL-PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
K+G + A+ + M F+ P TY+ ++ +G++D A ++ M +G+
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRW 549
TY A++ D A ++ EM + G V+ + ++ ++ +G ++ A+
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
LR M+S ++ + F + +NG + A D+V + +++ H VR
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 5/300 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDG-ISSFDAYNRVIQYLAKAEKLEL 266
P+ Y +L + L + + DE +SK G I + +Y +IQ K+++ ++
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDE----ASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A ++ G K D TY LI + G + + + S D++ Y +++
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
L K+GR A LF EM +RNI P ++++L+D ++G D A K++ G++
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
+ ++I+ + ++G LD AL + M + P+ Y+ I++ K + TA+ IF
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
MEK P TY+ L+ G A + + M L P + TYT ++ LA +
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/483 (19%), Positives = 201/483 (41%), Gaps = 53/483 (10%)
Query: 187 VNDIDASLSLYKW---AKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKD 243
+ D++ + L+ W K+ ++ C L L + R F+ I+ + + ++ K
Sbjct: 74 IQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFL-KLLARYRIFNEIEDVLGNLRNENVK- 131
Query: 244 GISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV-DTQTYNALITLFLNKGLPYKS 302
+ +A + V+ A++ L A + V V D N+L++L + +
Sbjct: 132 --LTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDA 189
Query: 303 FEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDS 362
++Y+ M S+D+ + +++ + G+++V KL + + P+ +++++
Sbjct: 190 RKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGG 249
Query: 363 MGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFR-- 420
K G ++ A ++ E++ G P+ + ++I + K G + RL E+K+ G R
Sbjct: 250 YCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVS 309
Query: 421 ---------------------------------PNYGLYTLIVESNAKSGKLDTAMSIFN 447
P+ Y +++ K GK + A+ +
Sbjct: 310 VWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLD 369
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+ K G +P +Y+ L++ + S + D A KL M G +P + TY ++ L
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIR 566
+D A + +++ G S D + ++LM + K G A M I + ++
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 567 QLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR---------CQEEQNER 617
L + +++G ++ A+ + V KVD+V + +++ R C NE
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 618 HLM 620
HL+
Sbjct: 550 HLV 552
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 127/271 (46%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
YN +I L K K E+A + G + +Y LI + + ++ M
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
C D TY ++I L SG +D A + ++ +R + P I++ L+ + K GR
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A ++ EM + P A +YA+LI+ + ++G D A +++ + G + + + +
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
++ +SG LD A++ N M + +P TYS +++ + + +A+K++ M
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMK 520
+P + TYT+++ + +A + EM+
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 122/282 (43%), Gaps = 18/282 (6%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
+P+ Y L D +S DFD + +F V+ K + +N +I+ ++ L+
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH---HNAMIKGFCRSGMLDE 538
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A C ++ D TY+ +I ++ + + +I+ ME +C + TY +I
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLIN 598
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGK-AGRLDTAMKIYMEMRGFGLR 385
G +A + F+EM+ R++ P+ +++L+ S+ K + L+ A+ + M
Sbjct: 599 GFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV 658
Query: 386 PSATMYASLIESYTK--AGKL----------DTAL--RLWDEMKKAGFRPNYGLYTLIVE 431
P+ + L++ + K +GK+ ++L + MK G+ + Y +
Sbjct: 659 PNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALV 718
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQ 473
G + TA + M K GF P P +++ +L G
Sbjct: 719 CLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 172/373 (46%), Gaps = 13/373 (3%)
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
SS+ ++ DAY YL++AE++ F C ++V K YN +I +
Sbjct: 470 SSEGYSANIDAYGER-GYLSEAERV---FICCQEVN----KRTVIEYNVMIKAYGISKSC 521
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
K+ E++ESM + + D TY ++ LA + ++M+E + ++
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 360 VDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
+ S K G+L+ A ++Y EM + + P +Y LI ++ G + A+ + MK+AG
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA---GFLPTPSTYSCLLEMHAASGQVDS 476
N +Y +++ K G LD A +I+ + ++ P T +C++ +++ V
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRK 701
Query: 477 AMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLM 535
A +++SM G T+ +L + + A +I +M+ M D +S + VL
Sbjct: 702 AEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLG 760
Query: 536 VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKV 595
++ DG A+ + M SSGI+ ++ + L MK G+ + A +E K
Sbjct: 761 LFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKR 820
Query: 596 DLVLYTSILAHLV 608
L L+ S L+ LV
Sbjct: 821 GLELWISTLSSLV 833
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 175/428 (40%), Gaps = 17/428 (3%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
+ ++ +++W K + Y N Y ++ L ++ + +QSL+DEM+ + GI ++
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMI----RKGIKPINS 223
Query: 251 -YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY--- 306
Y +I +K A C K+ G + D T ++ ++ K+ E +
Sbjct: 224 TYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKW 283
Query: 307 ---ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSM 363
E+ + L S TY MI + KSG++ A + F+ M E I P+ F++++
Sbjct: 284 SCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIY 343
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
G G+L + M+ P Y LI +TK ++ A + EMK G +P+
Sbjct: 344 GNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDP 402
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
Y ++ + + ++ A + +M+ T S L M+ + ++ + +
Sbjct: 403 VSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
Query: 484 MTNAGLRPGMST--YTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDG 541
AG MS+ Y+A + + + A ++ + + + + + ++ Y
Sbjct: 463 FHVAG---NMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISK 519
Query: 542 SVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYT 601
S + A M S G+ + L + + + LE + D + Y
Sbjct: 520 SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYC 579
Query: 602 SILAHLVR 609
++++ V+
Sbjct: 580 AVISSFVK 587
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 159/379 (41%), Gaps = 35/379 (9%)
Query: 174 LPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLF 233
+P+ HI++ + +L ++WA ++ + Y LF L R FD + L
Sbjct: 40 VPSDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLL 99
Query: 234 DEMVQDSSKDGISSFDA-YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITL 292
DEM DS G+ DA + +I+ +A ++ V G K + +N+++ +
Sbjct: 100 DEM-PDSI--GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDV 156
Query: 293 FLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
+ + + M A+ D TY +++ L+ + R+ FKL Q MK + P+
Sbjct: 157 LVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPN 216
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMR-------------------------------G 381
++++L+ ++ K G++ A + EM+
Sbjct: 217 AVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFS 276
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
G P ++E G++ AL + + ++ G + + +V+ GK+
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
A F +ME+ G+LP TY+ L+ + G +DSA+ +N M +R +T+ ++
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIR 396
Query: 502 LLASKKLVDVAAKILLEMK 520
L+ D KIL M+
Sbjct: 397 GLSIGGRTDDGLKILEMMQ 415
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 116/290 (40%), Gaps = 35/290 (12%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
+V++ L ++ A ++V+ GGKVD N L+ + G + + ME
Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMER 346
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
+ TY L+I G LD A F +MK IR +F F++L+ + GR D
Sbjct: 347 KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDD 406
Query: 372 AMKIYMEMR------------------GF-----------------GLRPSATMYASLIE 396
+KI M+ GF L P A + +
Sbjct: 407 GLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLI 466
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
S + G +D +D+M G P+ + ++ ++ GK++ ++ + NDM G+LP
Sbjct: 467 SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLP 526
Query: 457 TPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
ST++ ++ +V + +K M G P +Y +L L K
Sbjct: 527 RSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVK 576
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 39/330 (11%)
Query: 221 NQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGK 280
N+ R +A++ L E V+ SK G A N +++ K+ +A F +++ G
Sbjct: 295 NEGRVSEALEVL--ERVE--SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYL 350
Query: 281 VDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
+ +TYN LI + + G+ + + + M+ + +T+ +I L+ GR D K+
Sbjct: 351 PNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKI 410
Query: 341 FQEMKERN------IRPS----FG-------------------IFSSLVD------SMGK 365
+ M++ + I P +G +F VD S+ +
Sbjct: 411 LEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCE 470
Query: 366 AGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL 425
G +D Y +M G G PS + LI Y++ GK++ +L L ++M G+ P
Sbjct: 471 KGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSST 530
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
+ ++ K K+ + DM + G +P +Y+ LLE G + A L++ M
Sbjct: 531 FNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMV 590
Query: 486 NAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
+ P S +++++ L+ K + V + +
Sbjct: 591 EKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 8/356 (2%)
Query: 194 LSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA--- 250
+++ WA + + + +L + +L + FD + L + + F
Sbjct: 97 FAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPEL 156
Query: 251 ---YNRVIQYLAKAEKLELAFCCFKKVQG-SGGKVDTQTYNALITLFLNKGLPYKSFEIY 306
+ I +A K++ A F ++ GK + YN ++ ++ G K+ Y
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
+ M + D T+ ++I +S + D+A LF+EMKE+ P+ F++L+ +
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
G+++ +K+ EM G R S L++ + G++D A L ++ P+ Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
+VE K AM + ++ K G P + L+E SG+ + A M N
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDG 541
AG+ P T+ +L L S A ++ L + G+ D + VL+ + K+G
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 138/315 (43%), Gaps = 3/315 (0%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
+D +L + KR PN Y + + +S D D + M ++ +K + +F
Sbjct: 173 MDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTF- 231
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
N +I ++ K +LA F++++ G + + ++N LI FL+ G + ++ M
Sbjct: 232 --NILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEM 289
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
C +T E+++ L + GR+D A L ++ + + PS + SLV+ + +
Sbjct: 290 IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKA 349
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
AM++ E+ G P +L+E K+G+ + A ++M AG P+ + L+
Sbjct: 350 VRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLL 409
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ S A + G+ P +TY L+ G+ L N M + +
Sbjct: 410 LRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDM 469
Query: 490 RPGMSTYTAILTLLA 504
P + TY ++ L+
Sbjct: 470 LPDIFTYNRLMDGLS 484
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 200/473 (42%), Gaps = 59/473 (12%)
Query: 208 PNEECYLLLFDA-------LNQSRDFDAIQSLFDEMVQDS-SKDGISSFDAYNRVIQYLA 259
P+EE + + DA L +++ + IQ L + ++ S K +SS + V+ A
Sbjct: 30 PSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLS---VVSIFA 86
Query: 260 KAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE----IYESMEAAQCS 315
K+ ++ AF F+ V+ + Y L L L + + E +Y+ M +
Sbjct: 87 KSNHIDKAFPQFQLVRSRFPENKPSVY--LYNLLLESCIKERRVEFVSWLYKDMVLCGIA 144
Query: 316 LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI 375
+ T+ L+I +L S +D A +LF EM E+ +P+ F LV KAG D +++
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 376 YMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
M FG+ P+ +Y +++ S+ + G+ D + ++ ++M++ G P+ + + + K
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 436 SGKLDTAMSIFNDMEKAGFL----PTPSTYSCLLEMHAASGQVDSAMKLYNS-------- 483
GK+ A IF+DME +L P TY+ +L+ G ++ A L+ S
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 484 ---------------------------MTNAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
MT+ G+ P + +Y ++ L ++ A I+
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 517 LEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKN 575
MK G D V+ +L Y G VD A L+ M + N + L S K
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 576 GLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLILGATRH 628
G A+ LL +D V I+ L C + ++ + ++ G H
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGL--CGSGELDKAIEIVKGMRVH 495
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 151/364 (41%), Gaps = 32/364 (8%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
TYN ++ F GL + ++ES+ +Y + + L + G+ A + ++M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
++ I PS ++ L+D + K G L A I M+ G+ P A Y L+ Y GK+
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
D A L EM + PN +++ S K G++ A + M + G+ T + +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 465 LEMHAASGQVDSAMKLYNSMTNAG-----------------------LRPGMSTYTAILT 501
++ SG++D A+++ M G P + TY+ +L
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 502 LLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSG--- 557
L A + EM D A ++ + + K G + A R L+ M+ G
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 558 -IRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNE 616
+ T N +I L +KN ++E L++ ++ Y + + +L ++ ++
Sbjct: 593 SLETYNSLILGLG---IKNQIFE-IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648
Query: 617 RHLM 620
+L+
Sbjct: 649 TNLL 652
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 160/399 (40%), Gaps = 23/399 (5%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
+++ P+ Y L DA +SL EM++++ + + N ++ L K
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC---LPNAYTCNILLHSLWKM 444
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME----AAQCSLD 317
++ A +K+ G +DT T N ++ G K+ EI + M AA +L
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 318 SSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM 377
+S L+ SL E N P +S+L++ + KAGR A ++
Sbjct: 505 NSYIGLVDDSLI----------------ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Query: 378 EMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG 437
EM G L+P + Y I + K GK+ +A R+ +M+K G + Y ++
Sbjct: 549 EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN 608
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
++ + ++M++ G P TY+ ++ +V+ A L + M + P + ++
Sbjct: 609 QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFK 668
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSG 557
++ D+A ++ ++ + S + + G + A L + G
Sbjct: 669 YLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRG 728
Query: 558 IRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVD 596
F+ + L ES K E A +L ++ D
Sbjct: 729 FELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFD 767
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 124/290 (42%), Gaps = 7/290 (2%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y+ ++ L KA + A F ++ G + D+ YN I F +G +F + + M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
E C TY +I L ++ L EMKE+ I P+ +++ + + + ++
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ A + EM + P+ + LIE++ K D A ++ E + GLY+L+
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLM 704
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+G+L A + + GF Y L+E +++ A + + M + G
Sbjct: 705 FNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Query: 490 RPGMSTYTAI---LTLLASKKLVDVAAKILLEMKAMG---FSVDVSASDV 533
+ + L + +KK + A ++EM ++G VD +A D+
Sbjct: 765 GFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDI 814
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 229 IQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYN 287
I L DEM + GIS + YN IQYL + EK+E A ++ + ++
Sbjct: 613 IHGLMDEM----KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFK 668
Query: 288 ALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER 347
LI F + E++E+ + C Y LM L +G+L A +L + + +R
Sbjct: 669 YLIEAFCKVPDFDMAQEVFETA-VSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDR 727
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM--RGFGLRPSATMYASLIESYTKAGKLD 405
++ LV+S+ K L+ A I +M RG+G P+A M +I+ K G
Sbjct: 728 GFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALM--PVIDGLGKMGNKK 785
Query: 406 TALRLWDEM 414
A D+M
Sbjct: 786 EANSFADKM 794
>AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076) |
chr3:11238421-11240125 FORWARD
Length = 540
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 164/355 (46%), Gaps = 9/355 (2%)
Query: 169 DKLQFL---PN---MTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQ 222
D ++FL PN L L DI + +++++ +++ + Y L+ A+ +
Sbjct: 131 DSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHT--YSLMLKAVAE 188
Query: 223 SRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVD 282
+ ++ +F E+ ++ + YN I + + ++ ++G G
Sbjct: 189 VKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGT 248
Query: 283 TQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQ 342
TY+ L+++F+ G + ++Y+ M + SL MI + K + D+A K+FQ
Sbjct: 249 EITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQ 308
Query: 343 EMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAG 402
M ++ ++P+ ++L++S+GKAG++ K+Y ++ G +P + +L+ + KA
Sbjct: 309 SMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKAN 368
Query: 403 KLDTALRLWDEMKKAGFRP-NYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
+ + L+L+D ++ N LY + S K G + A+ + +ME +G + S+Y
Sbjct: 369 RYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSY 428
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
+ ++ S + A+ +Y M +P TY +++ L D IL
Sbjct: 429 NLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL 483
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 167/380 (43%), Gaps = 45/380 (11%)
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
+ ++ ++ L++ +K+ A F ++ G + + N+ ++ L G K+F ++E
Sbjct: 108 ETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEF 167
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM-KERNIRPSFGI--FSSLVDSMGK 365
M + ++ TY LM+ ++A+ + A ++F+E+ +E R F + +++ + G+
Sbjct: 168 MRKKE-NVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGR 226
Query: 366 AGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM--KKAGFRPNY 423
+ +I+ M+G G + Y+ L+ + + G+ + AL ++DEM K R +
Sbjct: 227 INNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRED- 285
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
+Y +I + K K D A+ IF M K G P + L+ +G+V K+Y+
Sbjct: 286 AMYAMI-SACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSV 344
Query: 484 MTNAGLRPGMSTYTAILT-LLASKKLVDV------------------------------- 511
+ + G +P T+ A+LT L + + DV
Sbjct: 345 LKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLG 404
Query: 512 ----AAKILLEMKAMGFSVDVSASD-VLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
A K+L EM+ G +V S+ + V+ K +AL M + N F
Sbjct: 405 YWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYL 464
Query: 567 QLFESCMKNGLYESAKPLLE 586
L SC+ L++ + +L+
Sbjct: 465 SLVRSCIWGSLWDEVEDILK 484
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 119/278 (42%), Gaps = 8/278 (2%)
Query: 316 LDSSTYELMIPSLAKSGRLD---VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTA 372
L+ E + L K RLD A +LF M+ ++P+ +S + + + G + A
Sbjct: 102 LEERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKA 161
Query: 373 MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRP---NYGLYTLI 429
++ MR + Y+ ++++ + ++ALR++ E+++ R + LY
Sbjct: 162 FTVFEFMRK-KENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTA 220
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + + I+ M+ G + T TYS L+ + G+ + A+ +Y+ M N +
Sbjct: 221 ISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKI 280
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALR 548
A+++ ++ D+A KI M G ++ A + L+ + K G V L +
Sbjct: 281 SLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFK 340
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLE 586
+ S G + + + L + K YE L +
Sbjct: 341 VYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFD 378
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+E + L AL ++ ++ + LFD M++ + ++ + YN + K E A
Sbjct: 352 PDEYTWNALLTALYKANRYEDVLQLFD-MIRSENLCCLNEY-LYNTAMVSCQKLGYWEKA 409
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+++GSG V T +YN +I+ + +YE M C ++ TY ++ S
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS 469
Query: 328 LAKSGRLDVAFKLFQEMKE--RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+ L+ E+++ + + P ++++ + M A ++Y++MR GL
Sbjct: 470 C-------IWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLE 522
Query: 386 PSATMYASLIESYTKAGK 403
P A ++++ K K
Sbjct: 523 PDGKTRAMMLQNLKKHQK 540
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 164/374 (43%), Gaps = 18/374 (4%)
Query: 220 LNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGG 279
LN D D + SL D SS + ++ ++Q AK LEL F FK++ G
Sbjct: 141 LNSPPDSDLVDSLLDTYEISSSTPLV-----FDLLVQCYAKIRYLELGFDVFKRLCDCGF 195
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY------ELMIPSLAKSGR 333
+ T N LI + + IYE C++D Y +MI L K GR
Sbjct: 196 TLSVITLNTLIHYSSKSKIDDLVWRIYE------CAIDKRIYPNEITIRIMIQVLCKEGR 249
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
L L + + PS + +SLV + + R++ +M + + + Y+
Sbjct: 250 LKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSI 309
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
++ + K G L +A +++DEM + GF N +YT+ V + G + A + ++ME++G
Sbjct: 310 VVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESG 369
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
P T++CL+ A G + ++ M GL P S + ++ ++ + V+ A
Sbjct: 370 VSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRAN 429
Query: 514 KILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESC 572
+IL + GF D + S ++ +I+ +D AL+ M+ + + R L
Sbjct: 430 EILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGL 489
Query: 573 MKNGLYESAKPLLE 586
G E+ + L+
Sbjct: 490 CTCGKVEAGEKYLK 503
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 115/273 (42%), Gaps = 4/273 (1%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
L+F L + R +++ L ++++ D I Y+ V+ AK L A F ++
Sbjct: 275 LVFRVLEEMRIEESMSLLKRLLMKNMVVDTI----GYSIVVYAKAKEGDLVSARKVFDEM 330
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
G ++ Y + + KG ++ + ME + S T+ +I A+ G
Sbjct: 331 LQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWE 390
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
+ + + M R + PS F+ +V S+ K ++ A +I + G P Y+ L
Sbjct: 391 EKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHL 450
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I + + +D AL+L+ EM+ P + ++ ++ GK++ M+K
Sbjct: 451 IRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLI 510
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
P Y L++ G +A ++YN M +
Sbjct: 511 EPNADIYDALIKAFQKIGDKTNADRVYNEMISV 543
>AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: PTAC2 (PLASTID
TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570
Blast hits to 5782 proteins in 175 species: Archae - 1;
Bacteria - 18; Metazoa - 305; Fungi - 261; Plants -
16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI
BLink). | chr1:3639908-3643974 FORWARD
Length = 664
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 168/385 (43%), Gaps = 50/385 (12%)
Query: 194 LSLYKWAKRQSWY-VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAY- 251
+ L++W ++ V + A N S+ + QS+ DE + + Y
Sbjct: 118 IQLFEWMQQHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTK---------INVYI 168
Query: 252 -NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT--LFLNKGLPYKSFEIYES 308
N ++ L K KL+ F +++ G K D TYN L+ + + G P K+ E+
Sbjct: 169 CNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYP-KAIELIGE 227
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
+ +DS Y ++ A +GR + A Q+MK P+ +SSL++S G
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGD 287
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
A ++ EM+ GL P+ M +L++ Y K G D + L E++ AG+ N Y +
Sbjct: 288 YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCM 347
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLP---------------------------TPSTY 461
+++ +K+GKL+ A SIF+DM+ G + +TY
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTY 407
Query: 462 S-CLLEM-------HAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
C L M + +G+++S M++ M + P +T+ ++ +KL +A
Sbjct: 408 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAY 467
Query: 514 KILLEMKAMGFSVDVSASDVLMVYI 538
+ L+M + G ++ L+ ++
Sbjct: 468 QTTLDMHSKGHRLEEELCSSLIYHL 492
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 134/286 (46%), Gaps = 2/286 (0%)
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
A +++Q + + + + + I +S++ + K G+LD+ +K++ +M+ GL+P Y +L+
Sbjct: 150 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLA 209
Query: 397 SYTKA-GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
K A+ L E+ G + + +Y ++ A +G+ + A + M+ G
Sbjct: 210 GCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS 269
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
P YS LL ++ G A +L M + GL P T +L + L D + ++
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
Query: 516 LLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMK 574
L E+++ G++ + +LM + K G ++ A M G+R++ + + + +
Sbjct: 330 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCR 389
Query: 575 NGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLM 620
+ ++ AK L + K DLV+ ++L R E ++ +M
Sbjct: 390 SKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMM 435
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 133/291 (45%), Gaps = 4/291 (1%)
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
SGR +LF+ M++ + S +SS + +G A + A++IY + + + +
Sbjct: 111 SGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYI 168
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY-TLIVESNAKSGKLDTAMSIFNDM 449
S++ K GKLD+ ++L+D+MK+ G +P+ Y TL+ A+ + ++
Sbjct: 169 CNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGEL 228
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
G Y +L + A++G+ + A M G P + Y+++L + K
Sbjct: 229 PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 510 DVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQL 568
A +++ EMK++G + V + +L VYIK G D + L ++S+G N L
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 348
Query: 569 FESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHL 619
+ K G E A+ + + + D + +++ L R + + + L
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 182/406 (44%), Gaps = 19/406 (4%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ + L L +R F+ ++SL + +V D Y R ++ L A +
Sbjct: 95 PDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDG---------FYKRPVEELGSA----MV 141
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
C + + + ++ + ++++ G+ + +++ M S+D + + + +
Sbjct: 142 DC---DISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVA 198
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
K R+D+ ++F+ M + ++ + + +V+ + + G ++ + K+ E G++P
Sbjct: 199 AKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPE 258
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
A Y ++I +Y K + MKK G N YTL++E + K+GK+ A +F+
Sbjct: 259 AYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD 318
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+M + G Y+ L+ + G + A L++ +T GL P TY A++ +
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
+ A ++ EM++ G ++ + L+ Y + G VD A M+ G + + F
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 567 QLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQE 612
+ + Y+ AK L + K+ V YT+++ V C+E
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID--VYCKE 482
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 156/360 (43%), Gaps = 3/360 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
YN +I K K ++ G + TY L+ L + G + ++++ M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
D Y +I + G + AF LF E+ E+ + PS + +L+D + K G +
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A + EM+ G+ + ++ +LI+ Y + G +D A ++D M++ GF+ + I
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + D A M + G + +Y+ L++++ G V+ A +L+ M++ G+
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM--VYIKDGSVDLAL 547
+P TY ++ + + A K+ M+A G D L+ I D +VD A+
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD-NVDEAM 559
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
R M G+ N+ + K G + A L + +D +YT+++ +
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 5/275 (1%)
Query: 232 LFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALI 290
LFDE+ ++ G+S S Y +I + K ++ A ++Q G + +N LI
Sbjct: 351 LFDEL----TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 291 TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
+ KG+ ++ IY+ ME D T + + R D A + M E ++
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
S +++L+D K G ++ A ++++EM G++P+A Y +I +Y K GK+ A +L
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
M+ G P+ YT ++ + +D AM +F++M G TY+ ++ +
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+G+ D A LY+ M G YTA++ + S
Sbjct: 587 AGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 186/415 (44%), Gaps = 44/415 (10%)
Query: 141 PFMNVTAVAKIVEVVKRWKWGPEL-----ETHLDKLQFLPNM---THILQALKIVNDIDA 192
PF N A I K K PEL E+ +D +PN+ T ++ AL + +D
Sbjct: 168 PFDNFVCSAVISGFCKIGK--PELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDE 225
Query: 193 SLSLYKWAKRQSWYVPNEECYLL------------LFDALNQSRDFDAIQSLFDEMVQDS 240
L + + + + +C L DAL Q R EMV+
Sbjct: 226 VRDLVRRLEDEGFEF---DCVFYSNWIHGYFKGGALVDALMQDR----------EMVEKG 272
Query: 241 SKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY 300
+ S Y+ +I L+K +E A K+ G + + TY A+I G
Sbjct: 273 MNRDVVS---YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV 360
++F ++ + + +D Y +I + + G L+ AF + +M++R I+PS +++++
Sbjct: 330 EAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVI 389
Query: 361 DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFR 420
+ + AGR+ A ++ G+ Y++L++SY K +D L + +A
Sbjct: 390 NGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIP 444
Query: 421 PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
+ + +++++ G A +++ M + P +TY+ +++ + +GQ++ A+++
Sbjct: 445 MDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEM 504
Query: 481 YNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
+N + + + + Y I+ L K ++D A ++L+E+ G +D+ S L+
Sbjct: 505 FNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 148/342 (43%), Gaps = 13/342 (3%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYES-MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
D +A+I+ F G P + +ES +++ + TY ++ +L + G++D L
Sbjct: 170 DNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDL 229
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
+ +++ +S+ + K G L A+ EM G+ Y+ LI+ +K
Sbjct: 230 VRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSK 289
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
G ++ AL L +M K G PN YT I+ K GKL+ A +FN + G
Sbjct: 290 EGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFL 349
Query: 461 YSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMK 520
Y L++ G ++ A + M G++P + TY ++ L V A ++
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV----- 404
Query: 521 AMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYE 579
+ G DV + S +L YIK ++D L R + I + + L ++ + G Y
Sbjct: 405 SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYG 464
Query: 580 SAKPLLETYVNSAAKVDLVLYTSILAHLVR--CQEEQNERHL 619
A L + ++DL T+ A +++ C+ Q E L
Sbjct: 465 EADALYR----AMPEMDLTPDTATYATMIKGYCKTGQIEEAL 502
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 15/264 (5%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYL-LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
+A++ +Y +R+ V L L D L R DA +V ++ + +SS D
Sbjct: 603 EAAIEVYMIMRRKGLTVTFPSTILKTLVDNL---RSLDAYL-----LVVNAGETTLSSMD 654
Query: 250 A--YNRVIQYLAKAEKL--ELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEI 305
Y +I L K L L C F K +G ++T TYN+LI +G ++ +
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGV--TLNTITYNSLINGLCQQGCLVEALRL 712
Query: 306 YESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGK 365
++S+E TY ++I +L K G A KL M + + P+ I++S+VD K
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 366 AGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL 425
G+ + AM++ + P A +S+I+ Y K G ++ AL ++ E K ++
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 426 YTLIVESNAKSGKLDTAMSIFNDM 449
+ +++ G+++ A + +M
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREM 856
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/497 (20%), Positives = 198/497 (39%), Gaps = 114/497 (22%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y +L D L++ + + L +M+++ + + ++ A +I+ L K KLE AF F
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTA---IIRGLCKMGKLEEAFVLFN 336
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
++ G +VD Y LI KG ++F + ME TY +I L +G
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI----------------- 375
R+ A ++ + + +S+L+DS K +D ++I
Sbjct: 397 RVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCN 451
Query: 376 -----YMEMRGFG-------------LRPSATMYASLIESYTKAGKLDTALRLWDEMKKA 417
++ M +G L P YA++I+ Y K G+++ AL +++E++K+
Sbjct: 452 ILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS 511
Query: 418 GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCLLEMHAAS----- 471
Y I+++ K G LDTA + ++ EK +L ++ + L +HA
Sbjct: 512 SVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGI 570
Query: 472 -----------------------------GQVDSAMKLYNSMTNAGL------------- 489
G ++A+++Y M GL
Sbjct: 571 LGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLV 630
Query: 490 -------------RPGMST--------YTAILTLLASKKLVDVAAKILLEMKAMGFSVD- 527
G +T YT I+ L + + A + K+ G +++
Sbjct: 631 DNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNT 690
Query: 528 VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLET 587
++ + ++ + G + ALR +++ G+ + L ++ K GL+ A+ LL++
Sbjct: 691 ITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDS 750
Query: 588 YVNSAAKVDLVLYTSIL 604
V+ ++++Y SI+
Sbjct: 751 MVSKGLVPNIIIYNSIV 767
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 155/388 (39%), Gaps = 12/388 (3%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
+ +L ++ A VPN Y L AL Q D ++ L + +D FD
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRL-----EDEGFEFDC 242
Query: 251 --YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
Y+ I K L A +++ G D +Y+ LI +G ++ +
Sbjct: 243 VFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGK 302
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M + TY +I L K G+L+ AF LF + I ++ +L+D + + G
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
L+ A + +M G++PS Y ++I AG++ A DE+ K G + Y+
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVSK-GVVGDVITYST 417
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
+++S K +D + I +A + LL+ G A LY +M
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD 477
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALR 548
L P +TY ++ ++ A ++ E++ S V + ++ K G +D A
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATE 537
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNG 576
L + G+ + R L S NG
Sbjct: 538 VLIELWEKGLYLDIHTSRTLLHSIHANG 565
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%)
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
E S+D Y ++I L K G L A L K R + + ++SL++ + + G L
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A++++ + GL PS Y LI++ K G A +L D M G PN +Y I
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
V+ K G+ + AM + + P T S +++ + G ++ A+ ++ + +
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEM 519
+ ++ +K ++ A +L EM
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 148/385 (38%), Gaps = 38/385 (9%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y +I+ K ++E A F +++ S YN +I KG+ + E+ +
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIEL 542
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
LD T ++ S+ +G L +++ N G+ + + + K G
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSF 602
Query: 370 DTAMKIYMEMRGFGLR---PSATM-------------------------------YASLI 395
+ A+++YM MR GL PS + Y +I
Sbjct: 603 EAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIII 662
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
K G L AL L K G N Y ++ + G L A+ +F+ +E G +
Sbjct: 663 NGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLV 722
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
P+ TY L++ G A KL +SM + GL P + Y +I+ + A ++
Sbjct: 723 PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Query: 516 LLEMKAMG-FSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCM 573
+ K MG + D + S ++ Y K G ++ AL I + F L +
Sbjct: 783 -VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFC 841
Query: 574 KNGLYESAKPLLETYVNSAAKVDLV 598
G E A+ LL + S + V L+
Sbjct: 842 TKGRMEEARGLLREMLVSESVVKLI 866
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 6/236 (2%)
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM--KKAGFRPNYGLYTLIVESNAKS 436
+R G PS+ + SLI + + G++D A+ + + M K + + + + ++ K
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 437 GKLDTAMSIFNDMEKAGFL-PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
GK + A+ F +G L P TY+ L+ G+VD L + + G
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 496 YTA-ILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFM 553
Y+ I LVD + EM G + DV + +L+ + K+G+V+ AL L M
Sbjct: 245 YSNWIHGYFKGGALVDALMQD-REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 303
Query: 554 DSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
G+ N + K G E A L ++ +VD LY +++ + R
Sbjct: 304 IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICR 359
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 157/374 (41%), Gaps = 44/374 (11%)
Query: 194 LSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNR 253
L +++W ++Q WY+P+ +G+ Y++
Sbjct: 117 LEVFRWMQKQRWYIPD---------------------------------NGV-----YSK 138
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE----IYESM 309
+I + K + +A F +++ SG + D YNALIT L+ K+ E + M
Sbjct: 139 LISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM 198
Query: 310 EAAQ-CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
+ + C + TY +++ + A+SG++D LF+++ + P F+ ++D+ GK G
Sbjct: 199 KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGM 258
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
+ + MR +P + LI+SY K + + + + + ++ +P +
Sbjct: 259 IKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNS 318
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++ + K+ +D A +F M ++P+ TY C++ M+ G V A +++ + +
Sbjct: 319 MIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESD 378
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLAL 547
ST A+L + L A K+ A D S L Y K +
Sbjct: 379 RVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQ 438
Query: 548 RWLRFMDSSGIRTN 561
++ M+ GI N
Sbjct: 439 ILMKKMEKDGIVPN 452
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAG-FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
L+ E KS K + +F M+K ++P YS L+ + GQ AM L++ M N
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 487 AGLRPGMSTYTAILTL-LASKKLVDVAAKI---LLEMKAMGFSVD--VSASDVLMVYIKD 540
+G RP S Y A++T L ++ K+ L +MK + V+ + +L + +
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 541 GSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLY 600
G VD + +D S + + + + ++ KNG+ + + +L ++ K D++ +
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 601 TSILAHLVRCQE----EQNERHLM 620
++ + QE EQ + LM
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLM 305
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 161/369 (43%), Gaps = 21/369 (5%)
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV 360
K+ + E M ++ D+S Y ++ L K G + A +L ++M++ + +++LV
Sbjct: 124 KAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALV 183
Query: 361 DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFR 420
+ G L+ +++ + GL P+A Y+ L+E+ K D A++L DE+ G
Sbjct: 184 RGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGE 243
Query: 421 PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
PN Y +++ K G+ D AM++F ++ GF +Y+ LL G+ + A L
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSL 303
Query: 481 YNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASD---VLMVY 537
M P + TY ++ LA + A ++L EM V+A+ V+
Sbjct: 304 LAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARL 363
Query: 538 IKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDL 597
K+G VDL ++ L M + N + C N + A ++++ N
Sbjct: 364 CKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTH 423
Query: 598 VLYTSILAHLVRCQEEQNERHLMLILGATRH----KAHKF------MC--GLFTGPEQRK 645
Y S++ L C++ L+ TR AH + +C G+FTG +
Sbjct: 424 DFYKSVITSL--CRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME-- 479
Query: 646 QPVLSFVRE 654
VLS + E
Sbjct: 480 --VLSIMEE 486
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 155/375 (41%), Gaps = 9/375 (2%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
LL+D +R AI+ + + MV S I AY ++ L K + A +K+
Sbjct: 112 LLYDLCKANRLKKAIR-VIELMV---SSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKM 167
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
+ G +T TYNAL+ G +S + E + + ++ TY ++ + K
Sbjct: 168 EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGT 227
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
D A KL E+ + P+ ++ L+ K GR D AM ++ E+ G + + Y L
Sbjct: 228 DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNIL 287
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG- 453
+ G+ + A L EM P+ Y +++ S A G+ + A+ + +M K
Sbjct: 288 LRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNH 347
Query: 454 -FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
F T ++Y+ ++ G+VD +K + M +P TY AI +L V A
Sbjct: 348 QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEA 407
Query: 513 AKIL--LEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFE 570
I+ L K + D S V+ + G+ A + L M G + L
Sbjct: 408 FYIIQSLSNKQKCCTHDFYKS-VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 571 SCMKNGLYESAKPLL 585
G++ A +L
Sbjct: 467 GLCLEGMFTGAMEVL 481
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 153/351 (43%), Gaps = 14/351 (3%)
Query: 180 ILQALKIVNDIDASLSLYKWAKR--QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMV 237
+++ L ++ ++ SL ++ +R Q PN Y L +A + R D L DE++
Sbjct: 182 LVRGLCMLGSLNQSL---QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 238 QDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKG 297
K G + +YN ++ K + + A F+++ G K + +YN L+ G
Sbjct: 239 ---VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Query: 298 LPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERN--IRPSFGI 355
++ + M+ + TY ++I SLA GR + A ++ +EM + N R +
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
++ ++ + K G++D +K EM +P+ Y ++ K+ A + +
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
+ Y ++ S + G A + +M + GF P TYS L+ G
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFT 475
Query: 476 SAMKLYNSMTNA-GLRPGMSTYTAILTLLASKKLVDVAAKI---LLEMKAM 522
AM++ + M + +P + + A++ L + D+A ++ ++E K M
Sbjct: 476 GAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 526
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 5/282 (1%)
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
L +F + + +P+ + L+ + KA RL A+++ M G+ P A+ Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
L+ K G + A++L ++M+ G+ N Y +V G L+ ++ + + G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
P TYS LLE D A+KL + + G P + +Y +LT + D A
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 514 KILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESC 572
+ E+ A GF +V + ++L+ DG + A L MD + L S
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 573 MKNGLYESAKPLLE--TYVNSAAKVDLVLYTSILAHLVRCQE 612
+G E A +L+ + N +V Y ++A L C+E
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARL--CKE 366
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 124/315 (39%), Gaps = 41/315 (13%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y +L + D +LF E+ K + S YN +++ L + E A
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVS---YNILLRCLCCDGRWEEA 300
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAA--QCSLDSSTYELMI 325
++ G TYN LI G ++ ++ + M Q + +++Y +I
Sbjct: 301 NSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVI 360
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS---------------------------- 357
L K G++D+ K EM R +P+ G ++
Sbjct: 361 ARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKC 420
Query: 358 -------SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
S++ S+ + G A ++ EM G P A Y++LI G A+ +
Sbjct: 421 CTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEV 480
Query: 411 WDEMKKA-GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHA 469
M+++ +P + ++ K + D AM +F M + +P +TY+ L+E A
Sbjct: 481 LSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIA 540
Query: 470 ASGQVDSAMKLYNSM 484
+++ A ++ + +
Sbjct: 541 HEDELELAKEVLDEL 555
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 8/264 (3%)
Query: 157 RWKWGPELETHLDKLQFLPNMTH---ILQALKIVNDIDASLSLYK-WAKRQSWYVPNEEC 212
RW+ L +D P++ ++ +L + +L + K +K +
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y + L + D + DEM+ K +++A + ++ +K ++ AF +
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQE---AFYIIQ 412
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
+ Y ++IT KG + +F++ M D+ TY +I L G
Sbjct: 413 SLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 472
Query: 333 RLDVAFKLFQEMKE-RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
A ++ M+E N +P+ F++++ + K R D AM+++ M P+ T Y
Sbjct: 473 MFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTY 532
Query: 392 ASLIESYTKAGKLDTALRLWDEMK 415
A L+E +L+ A + DE++
Sbjct: 533 AILVEGIAHEDELELAKEVLDELR 556
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%)
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
+++ G K D LI L + E+ + M+ S + TY +I L KSG
Sbjct: 38 QMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSG 97
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
RL A + EM + I P+ FS+L+D+ K G+L +Y M + P+ Y+
Sbjct: 98 RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYS 157
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
SLI ++D A+++ D M G PN Y+ + KS ++D + + +DM +
Sbjct: 158 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G + + L++ + +G++D A+ ++ MT+ GL P + +Y +L L + V+ A
Sbjct: 218 GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 143/338 (42%), Gaps = 43/338 (12%)
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
K+ G + D T ++L+ F + + ME D ++I +L K+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+ A ++ + MK+R I P+ +SSL+ + K+GRL A + EM + P+ ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
+LI++Y K GKL ++ M + PN Y+ ++ ++D A+ + + M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G P TYS L S +VD +KL + M G VA
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG----------------------VA 220
Query: 513 AKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSG----IRTNNFIIRQL 568
A VS + ++ Y + G +DLAL +M S+G IR+ N ++ L
Sbjct: 221 ANT------------VSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Query: 569 FESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAH 606
F NG E A E + +D++ YT I+ H
Sbjct: 269 FA----NGEVEKALSRFEHMQKTRNDLDIITYT-IMIH 301
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 128/267 (47%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
+I L K + A K+++ G + TY++LIT G + M++ +
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 113
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
+ + T+ +I + AK G+L +++ M + +I P+ +SSL+ + R+D A+
Sbjct: 114 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI 173
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
K+ M G P+ Y++L + K+ ++D ++L D+M + G N +++
Sbjct: 174 KMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
++GK+D A+ +F M G +P +Y+ +L A+G+V+ A+ + M +
Sbjct: 234 FQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDI 293
Query: 494 STYTAILTLLASKKLVDVAAKILLEMK 520
TYT ++ + +V A + ++K
Sbjct: 294 ITYTIMIHGMCKACMVKEAYDLFYKLK 320
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
++M G+ P +SL+ + + + A+ + +M+K G + + + T+++++ K+
Sbjct: 2 LKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
+ A+ + M+ G P TYS L+ SG++ A + + M + + P + T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 497 TAILTLLASK-KL--VDVAAKILLEMKAMGFSVD---VSASDVLMVYIKDGSVDLALRWL 550
+A++ A + KL VD K++++M S+D + S ++ VD A++ L
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQM-----SIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Query: 551 RFMDSSGIRTNNFIIRQLFESCMKNGLYESAK 582
M S G N + S + NG ++S++
Sbjct: 177 DLMISKGCTPN-----VVTYSTLANGFFKSSR 203
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 7/196 (3%)
Query: 175 PNM---THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQS 231
PN+ + ++ L + N +D ++ + + PN Y L + +S D
Sbjct: 151 PNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC-TPNVVTYSTLANGFFKSSRVDDGIK 209
Query: 232 LFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT 291
L D+M Q S N +I+ +A K++LA F + +G + ++YN ++
Sbjct: 210 LLDDMPQRGVAANTVSC---NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 292 LFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP 351
G K+ +E M+ + LD TY +MI + K+ + A+ LF ++K + + P
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEP 326
Query: 352 SFGIFSSLVDSMGKAG 367
F ++ ++ + +AG
Sbjct: 327 DFKAYTIMIAELNRAG 342
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 149/328 (45%), Gaps = 4/328 (1%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G + D + I G ++ + ++ S DS + +I K G+ + A
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
KL + +RP+ ++SS + ++ G + A I+ E+ GL P Y ++I+
Sbjct: 361 IKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
Y G+ D A + + + K+G P+ T+++ + ++ G + A S+F +M+ G
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
TY+ L+ + + Q++ +L + M +AG+ P ++TY ++ + + +D A +I+
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 518 EMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
E+ GF A +DV+ + K G A +M ++ + L K
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 577 LYESAKPLLETYVNSAAKVDLVLYTSIL 604
E A L +++ K D+VLY +++
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 2/271 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y +I + + AF F + SG T LI G + ++ +M
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ LD TY ++ K+ +L+ F+L EM+ I P ++ L+ SM G +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
D A +I E+ G PS + +I ++K G A LW M +P+ + +
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL 589
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ K+ +++ A+ +FN + AG P Y+ L+ + + G ++ A +L M G+
Sbjct: 590 LHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Query: 490 RPGMSTYTAILTLLASKKLV--DVAAKILLE 518
P ST+ A++ L K+ V + A +LLE
Sbjct: 650 LPNESTHHALVLGLEGKRFVNSETHASMLLE 680
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 135/303 (44%), Gaps = 4/303 (1%)
Query: 304 EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSM 363
E E M + L+++ L I G D ++L MK IRP F+ +D +
Sbjct: 257 EFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKL 316
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
KAG L A + +++ FG+ + +S+I+ + K GK + A++L + RPN
Sbjct: 317 CKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNI 373
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
+Y+ + + +G + A +IF ++ + G LP Y+ +++ + G+ D A + + +
Sbjct: 374 FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGA 433
Query: 484 MTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGS 542
+ +G P ++T T ++ + + A + MK G +DV + LM Y K
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ 493
Query: 543 VDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTS 602
++ + M S+GI + L S + G + A ++ + + +T
Sbjct: 494 LNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTD 553
Query: 603 ILA 605
++
Sbjct: 554 VIG 556
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 129/285 (45%), Gaps = 9/285 (3%)
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
F+++ G D Y +I + N G K+F+ + ++ + +T ++I + ++
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
G + A +F+ MK ++ +++L+ GK +L+ ++ EMR G+ P
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
Y LI S G +D A + E+ + GF P+ +T ++ +K G A ++ M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
P T S LL + + +++ A+ L+N + +AGL+P + Y ++ S ++
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 511 VAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDS 555
A +++ M G + S L+ L L RF++S
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALV---------LGLEGKRFVNS 671
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 127/287 (44%), Gaps = 4/287 (1%)
Query: 319 STYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
+ + ++I + ++++A KL ++ + I PS G+ SL+ + + L+ A +
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
M G +A + + I Y G D L MK G RP+ +T+ ++ K+G
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
L A S+ ++ G + S +++ G+ + A+KL +S LRP + Y++
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSS 378
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSG 557
L+ + S + A+ I E+ +G D V + ++ Y G D A ++ + SG
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 558 IRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ L +C + G A+ + K+D+V Y +++
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 143/312 (45%), Gaps = 13/312 (4%)
Query: 232 LFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT 291
L DEM+Q + + N ++Q K+E A+ K+Q G K D T+N L
Sbjct: 451 LRDEMLQPNDR-------TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 292 LFLNKGLPYKSFE-IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
+ G + + I M + + T ++ + G+++ A + F MKE +
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
P+ +F+SL+ +D ++ M FG++P +++L+ +++ G + +
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
+ +M + G P+ ++++ + A++G+ + A I N M K G P Y+ ++ +
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 471 SGQVDSAMKLYNSMTN-AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVS 529
+G++ AM++Y M GL P ++TY ++ K A ++L +M+ +V
Sbjct: 684 AGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK----NVV 739
Query: 530 ASDVLMVYIKDG 541
+ M I DG
Sbjct: 740 PTRKTMQLIADG 751
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 144/336 (42%), Gaps = 40/336 (11%)
Query: 230 QSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNAL 289
S+F+ ++++ K S Y ++ L + + KV+ +G K DT +NA+
Sbjct: 339 HSIFNTLIEEGHK---PSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 290 ITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM-KERN 348
I G ++ +I+E M+ + C +ST+ +I K G+L+ + +L M ++
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 349 IRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL-------------- 394
++P+ + LV + +++ A I +M+ +G++P + +L
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 395 ----------------------IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
+ Y + GK++ ALR + MK+ G PN ++ +++
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
+D + + ME+ G P T+S L+ ++ G + ++Y M G+ P
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 493 MSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV 528
+ ++ + A + A +IL +M+ G +V
Sbjct: 636 IHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV 671
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 158/354 (44%), Gaps = 48/354 (13%)
Query: 271 FKKVQGSGGKV--DTQTYNALITLFLNKGLPYKSFEIYESM--EAAQCSLDSSTYELMIP 326
F V SGG D ++ L+ + +G P ++ I+ ++ E + SL TY ++
Sbjct: 305 FPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSL--ITYTTLVT 362
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+L + L ++++ ++P +F++++++ ++G LD AMKI+ +M+ G +P
Sbjct: 363 ALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKP 422
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEM-KKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
+A+ + +LI+ Y K GKL+ + RL D M + +PN ++V++ K++ A +I
Sbjct: 423 TASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNI 482
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL-YNSMTNAGLRPGMSTYTAILTLLA 504
M+ G P T++ L + +A G +A + M + ++P + T I+
Sbjct: 483 VYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVN--- 539
Query: 505 SKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFI 564
Y ++G ++ ALR+ M G+ N F+
Sbjct: 540 -------------------------------GYCEEGKMEEALRFFYRMKELGVHPNLFV 568
Query: 565 IRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL------AHLVRCQE 612
L + + + +++ K D+V +++++ + RC+E
Sbjct: 569 FNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 142/353 (40%), Gaps = 38/353 (10%)
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A F + G K TY L+T + + + +E D+ + +I
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL----------------- 369
+ ++SG LD A K+F++MKE +P+ F++L+ GK G+L
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 370 -------------------DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
+ A I +M+ +G++P + +L ++Y + G TA +
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 411 -WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHA 469
M +PN IV + GK++ A+ F M++ G P ++ L++
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Query: 470 ASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVS 529
+D ++ + M G++P + T++ ++ +S + +I +M G D+
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIH 637
Query: 530 ASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
A +L Y + G + A + L M G+R N I Q+ G + A
Sbjct: 638 AFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 170/397 (42%), Gaps = 35/397 (8%)
Query: 181 LQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAI----------- 229
L LK + D + +LSL+ + + + Y L L +SR+FDA+
Sbjct: 53 LTDLKEIEDPEEALSLFHQYQEMG-FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 230 ----QSLFDEMVQDSSKDG-----------ISSFD------AYNRVIQYLAKAEKLELAF 268
+SLF ++Q K G I+SFD + N +I L +LE A
Sbjct: 112 VRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 269 CCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
F + + ++ ++N LI FL+K + ++++ M + TY +I L
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
++ + A L ++M ++ IRP+ F L+ + G + A K+ +M G +P
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
Y L+ K G++D A L EMKK +P+ +Y ++V ++ A + +
Sbjct: 292 VNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE 351
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
M+ G P +TY +++ DS + + N+M + P +T+ ++ L
Sbjct: 352 MQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGN 411
Query: 509 VDVAAKILLEMKAMGFSVDVSASDVLM--VYIKDGSV 543
+D A +L M S A L+ + IKDG V
Sbjct: 412 LDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGV 448
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 125/314 (39%), Gaps = 36/314 (11%)
Query: 299 PYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSS 358
P ++ ++ + D +Y +I LAKS D ++ + ++ RN+R +F
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 359 LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
L+ GKAG +D A+ ++ ++ F + +LI G+L+ A +D K
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAM 478
RPN + ++++ + A +F++M + P+ TY+ L+ + + A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 479 KLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI 538
L M +RP T+ ++ L K + A K++ +M+ G
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG--------------C 287
Query: 539 KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLV 598
K G V+ + L K G + AK LL K D+V
Sbjct: 288 KPGLVNYGI--------------------LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVV 327
Query: 599 LYTSILAHLVRCQE 612
+Y ++ HL C E
Sbjct: 328 IYNILVNHL--CTE 339
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 170/410 (41%), Gaps = 40/410 (9%)
Query: 148 VAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDI-DASLSLYKWAKRQSWY 206
V +I VV+ +E L+KL F + LK + ++ + W K++ +
Sbjct: 126 VHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGF 185
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
Y + ++R+ D + L EM ++ I + + +I KA+K+
Sbjct: 186 SHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRT---WTILISVYGKAKKIGK 242
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
F+K++ SG ++D YN +I G + E Y+ M + TY++++
Sbjct: 243 GLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD 302
Query: 327 SLAKSGRLDV-----------------------------------AFKLFQEMKERNIRP 351
+AKS ++DV A +L +E+K + +
Sbjct: 303 CIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
F LV + +A R+ A++I M+ L S +Y +I Y + + AL +
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS-NVYGIIISGYLRQNDVSKALEQF 421
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
+ +KK+G P YT I++ K + + ++FN+M + G P + ++ H
Sbjct: 422 EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQ 481
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+V A K+++SM G++P +Y+ + L D KI +M A
Sbjct: 482 NRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHA 531
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 242 KDGISS-FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY 300
KDG S YN ++ +A L++ +++ +G D +T+ LI+++
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIG 241
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV 360
K ++E M + LD++ Y +MI SL +GR D+A + ++EM E+ I + L+
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 301
Query: 361 DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFR 420
D + K+ ++D I +M + L++S+ +GK+ AL L E+K
Sbjct: 302 DCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMC 361
Query: 421 PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
+ + ++V+ ++ ++ A+ I + M++ L + Y ++ + V A++
Sbjct: 362 LDAKYFEILVKGLCRANRMVDALEIVDIMKRRK-LDDSNVYGIIISGYLRQNDVSKALEQ 420
Query: 481 YNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIK 539
+ + +G P +STYT I+ L K + + EM G D V+ + V+ ++
Sbjct: 421 FEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLG 480
Query: 540 DGSVDLALRWLRFMDSSGIR 559
V A + M+ GI+
Sbjct: 481 QNRVAEAWKVFSSMEEKGIK 500
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 124/537 (23%), Positives = 216/537 (40%), Gaps = 83/537 (15%)
Query: 48 NYPIY--SLCHSS----IPQFFRLLKTPKFAIYSDFCGTNPYFVRNYCSAKNNTGSGSSQ 101
+Y I+ LC SS I + F + K I D F S + N
Sbjct: 505 SYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDI------FSWVISSMEKNGEKEKIH 558
Query: 102 WTEDIQ-----YLDESGGVIYSGKGIRSVEPG-VDDH-----VMVGGLKKPF-----MNV 145
++IQ Y DE G SGK S E VDD+ V L M+V
Sbjct: 559 LIKEIQKRSNSYCDELNG---SGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDV 615
Query: 146 TAVAKIVEVVKRWKWGPELETHLDK--LQFLPNMT-HILQALKIVNDIDASLSLYKWAKR 202
+ +++ + W+ E L+K +QF P + +L+ KI + A L + W +
Sbjct: 616 QEICRVLSSSRDWERTQE---ALEKSTVQFTPELVVEVLRHAKIQGN--AVLRFFSWVGK 670
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
++ Y N E Y + +DF ++SLF EM + + + D + +I +
Sbjct: 671 RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGC---LITQDTWAIMIMQYGRTG 727
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKG-------------------LPYKSF 303
+A FK+++ G + T+ LIT+ K +P +
Sbjct: 728 LTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDREL 787
Query: 304 ---------EIYESMEAAQCSLDS---------STYELMIPSLAKSGRLDVAFKLFQEMK 345
E+ + +A C LDS Y + I +L + G+L+ A +
Sbjct: 788 VQDYLGCLCEVGNTKDAKSC-LDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFE 846
Query: 346 -ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
ER++ + + S+V + + G L A+ M+ G +P +Y SLI + K +L
Sbjct: 847 GERSLLDQY-TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQL 905
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
+ L +M+ P+ YT ++ GK++ A + F +ME+ G P TYS
Sbjct: 906 EKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKF 965
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+ + + + A+KL + M + G+ P + + L + D+ A+I L+ K+
Sbjct: 966 INCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDL-ARIALQKKS 1021
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 13/294 (4%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR 380
Y M+ ++ LD+ +L EM++ ++ L+ GKA ++ + ++ +MR
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 381 GFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLD 440
G AT Y +I S AG+ D AL + EM + G Y ++++ AKS K+D
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 441 TAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL 500
SI +DM + + + LL+ SG++ A++L + N + + Y IL
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD-AKYFEIL 370
Query: 501 T--LLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSG- 557
L + ++VD A +I+ MK ++ Y++ V AL + SG
Sbjct: 371 VKGLCRANRMVD-ALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR 429
Query: 558 ---IRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA-HL 607
+ T I++ LF K +E L + + + D V T+++A HL
Sbjct: 430 PPRVSTYTEIMQHLF----KLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL 479
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 336 VAFKLFQEMKERN-IRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
+A + F +K+++ GI+++++ G+A LD ++ EM G + L
Sbjct: 171 LAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTIL 230
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I Y KA K+ L ++++M+K+GF + Y +++ S +G+ D A+ + +M + G
Sbjct: 231 ISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
TY LL+ A S +VD + + M + +L + A +
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALE 350
Query: 515 ILLEMKAMGFSVDVSASDVLM 535
++ E+K +D ++L+
Sbjct: 351 LIRELKNKEMCLDAKYFEILV 371
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/500 (18%), Positives = 193/500 (38%), Gaps = 56/500 (11%)
Query: 129 VDDHVMVGGLKKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVN 188
+ +H G L K F + + +E+++ K E LD F + + +A ++V+
Sbjct: 326 ISEHDAFGYLLKSFCVSGKIKEALELIRELK---NKEMCLDAKYFEILVKGLCRANRMVD 382
Query: 189 DIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSF 248
+L + KR+ + + Y ++ + D F+ + + +S+
Sbjct: 383 ----ALEIVDIMKRRK--LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVST- 435
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
Y ++Q+L K ++ E F ++ +G + D+ A++ L + ++++++ S
Sbjct: 436 --YTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSS 493
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
ME +Y + + L +S R D K+F +M I IFS ++ SM K G
Sbjct: 494 MEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
Query: 369 LDTAMKIYM-------------EMRGFGLR--------------PSATMYASLIESYTKA 401
+ KI++ E+ G G P ++L + +
Sbjct: 554 KE---KIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSAV 610
Query: 402 GKLD--------TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL--DTAMSIFNDM-E 450
K+D ++ R W+ ++A + +V + K+ + + F+ + +
Sbjct: 611 DKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGK 670
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
+ G+ Y+ +++ L+ M G T+ ++ L +
Sbjct: 671 RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTN 730
Query: 511 VAAKILLEMKAMGFSVDVSASDVLMVYI---KDGSVDLALRWLRFMDSSGIRTNNFIIRQ 567
+A + EMK MG S L+ + K +V+ A R R M SG + +++
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 568 LFESCMKNGLYESAKPLLET 587
+ G + AK L++
Sbjct: 791 YLGCLCEVGNTKDAKSCLDS 810
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 174/399 (43%), Gaps = 31/399 (7%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYV-PNEECYLLLFDALNQSRDFDAIQSLFDEMVQ 238
I+ + + D ++L+L +K + ++ P+ Y + D L + Q LF EM++
Sbjct: 267 IVNGMCKMGDTKSALNL--LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 239 ----------DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNA 288
+ DG SF ++ + L + E+ D T+NA
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-------------NPDVLTFNA 371
Query: 289 LITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERN 348
LI+ + +G +++ ++ + M D+ TY MI K R D A +F M
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 349 IRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTAL 408
P F++++D +A R+D M++ E+ GL + T Y +LI + + L+ A
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 409 RLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMH 468
L+ EM G P+ +++ ++ KL+ A+ +F ++ + Y+ ++
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 469 AASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV 528
+VD A L+ S+ G+ P + TY +++ K + A + +MK G D
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 529 SASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
S + L+ +K G +D ++ + M S+G + F I+
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 157/365 (43%), Gaps = 25/365 (6%)
Query: 217 FDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQG 276
F +L+ + DF FD MV+ S+ ++ D N+VI + + ++A ++K++
Sbjct: 84 FKSLDDAIDF------FDYMVR--SRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEI 134
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
++ ++N LI F + S + + D T+ ++ L R+
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 337 AFKLF---------------QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
A LF +M E + P F++L++ + GR+ A + +M G
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
GL Y +++ K G +AL L +M++ +P+ +Y+ I++ K G
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
A +F++M + G P TY+C+++ + G+ A +L M + P + T+ A+++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 502 LLASKKLVDVAAKILLEM-KAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRT 560
+ + A K+ EM F V+ + ++ + K D A M S + T
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT 434
Query: 561 NNFII 565
N II
Sbjct: 435 FNTII 439
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 131/354 (37%), Gaps = 49/354 (13%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
N +I +F+ P + +Y ME + L+ ++ ++I +L + F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKI--YMEMRGF-------------GLRPSATMY 391
+P F++L+ + R+ A+ + YM GF GL P +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
+LI G++ A L ++M G + Y IV K G +A+++ + ME+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
P YS +++ G A L++ M G+ P + TY ++
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID---------- 339
Query: 512 AAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
GF SD A R LR M I + L +
Sbjct: 340 -----------GFCSFGRWSD-------------AQRLLRDMIEREINPDVLTFNALISA 375
Query: 572 CMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLILGA 625
+K G A+ L + ++ D V Y S++ + + +H+ ++ +
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
>AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6328519-6329970 REVERSE
Length = 483
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 175/417 (41%), Gaps = 34/417 (8%)
Query: 139 KKPFMNVTAVAKIVEVV--KRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSL 196
+K ++ T +AK V + +R +W L + F + + LK N++ SL
Sbjct: 41 QKSAVSYTEMAKTVSTIMRERQRWQQTLVSDFPSFDFADPL-FFGELLKSQNNVLFSLWF 99
Query: 197 YKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFD------------EMVQDSSKDG 244
++W Y P +LF AL + A +S D + V+ S++G
Sbjct: 100 FRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEG 159
Query: 245 I-----------------SSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYN 287
+ SS N V+ KA KL+ + K++ S + D++
Sbjct: 160 LVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES--EFDSERIR 217
Query: 288 ALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER 347
LI + G + +E+ + Y +I + G ++ M
Sbjct: 218 CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAW 277
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA 407
N PS I+ ++ + + A I+ ++ G P +Y ++I + + G L +A
Sbjct: 278 NHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEM 467
+LW EM K G RPN Y +++ + K G++ + +N+M + G+ T + + +++
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 468 HAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ G+ D A +++ +M+ G+ P TY A++ + V+ K+ E+KA+G
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGL 454
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 4/266 (1%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQD 239
+++AL D+ L K +Q P + Y L + ++ + + M+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQG-LDPGQYVYAKLISGFCEIGNYACMSEVLHTMI-- 275
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
+ + S Y ++I+ L +K A+C FK ++ G D Y +I F KG
Sbjct: 276 -AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWL 334
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
+ +++ M + Y +MI K G + + + EM + +++
Sbjct: 335 GSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTM 394
Query: 360 VDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
+ G+ D A +I+ M G+ P+A Y +LI+ + K K++ L+L+ E+K G
Sbjct: 395 IKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGL 454
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSI 445
+P+ Y +V + S + T++++
Sbjct: 455 KPSGMAYAALVRNLKMSDSVATSLNL 480
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 188/395 (47%), Gaps = 18/395 (4%)
Query: 189 DIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSF 248
D L ++ A +Q + N Y +L D L + + F A+ ++ +M ++ + S F
Sbjct: 68 DPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLF 127
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQG-SGGKVDTQTYNALITLFLNKGLPYKSFEIYE 307
++++ ++++ + F +Q + K + + L ++ G S ++
Sbjct: 128 L---NLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKL-- 182
Query: 308 SMEAAQCSL----DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR-PSFGIFSSLVDS 362
+ A+ +L ++ + +++ K+G ++ AF + +EMK I P+ +S+L+D
Sbjct: 183 -LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDC 241
Query: 363 MGKAGRLDTAMKIYMEM-RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRP 421
+ R A++++ +M G+ P + +I + +AG+++ A ++ D MKK G P
Sbjct: 242 LFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNP 301
Query: 422 NYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLY 481
N Y+ ++ K GK+ A F++++K G Y+ L+ +G+ D AMKL
Sbjct: 302 NVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Query: 482 NSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKD 540
M + R TY IL L+S+ + A ++L + + G ++ + +++ +
Sbjct: 362 GEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Query: 541 GSVDLALRWLRFMDSSGI----RTNNFIIRQLFES 571
G ++ A+++L M GI T N ++ +L ES
Sbjct: 422 GELEKAVKFLSVMSERGIWPHHATWNELVVRLCES 456
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSG-GKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+N ++++ K + AF ++++ SG ++ TY+ L+ ++ E++E M
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 310 EAAQ-CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
+ + S D T+ +MI ++G ++ A K+ MK+ P+ +S+L++ K G+
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
+ A + + E++ GL+ Y +L+ + + G+ D A++L EMK + R + Y +
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
I+ + G+ + A+ + + G +Y +L +G+++ A+K + M+ G
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG 438
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ P +T+ ++ L ++ ++L+ +G
Sbjct: 439 IWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGL 474
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 144/325 (44%), Gaps = 40/325 (12%)
Query: 189 DIDASLSLYKWAKRQSWYVPNEECYLLLFDAL-NQSRDFDAIQSLFDEMVQDSSKDGISS 247
DI+ + + + KR PN Y L D L SR +A++ LF++M+ SK+GIS
Sbjct: 211 DINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE-LFEDMI---SKEGISP 266
Query: 248 FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYE 307
D T+N +I F G ++ +I +
Sbjct: 267 ----------------------------------DPVTFNVMINGFCRAGEVERAKKILD 292
Query: 308 SMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
M+ C+ + Y ++ K G++ A + F E+K+ ++ +++L++ + G
Sbjct: 293 FMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG 352
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
D AMK+ EM+ R Y ++ + G+ + AL++ D+ G N G Y
Sbjct: 353 ETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYR 412
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
+I+ + +G+L+ A+ + M + G P +T++ L+ SG + +++
Sbjct: 413 IILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRI 472
Query: 488 GLRPGMSTYTAIL-TLLASKKLVDV 511
GL PG ++ A++ ++ +KLV V
Sbjct: 473 GLIPGPKSWGAVVESICKERKLVHV 497
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 136/318 (42%), Gaps = 38/318 (11%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
+++TY +++ +L + + + +MK R +F +L+ ++ D M+++
Sbjct: 88 NNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMF 147
Query: 377 MEMRGFG-LRPSATMYASLIESYTKAGKLDTALRLWDEMK-KAGFRPNYGLYTLIVESNA 434
++ ++PS ++ + +G+++ + +L K G +PN ++ ++V+ +
Sbjct: 148 NLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHC 207
Query: 435 KSGKLDTAMSIFNDMEKAGF-LPTPSTYSCLLEMHAASGQVDSAMKLYNSM-TNAGLRPG 492
K+G ++ A + +M+++G P TYS L++ A + A++L+ M + G+ P
Sbjct: 208 KNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPD 267
Query: 493 MSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRF 552
T+ ++ GF + G V+ A + L F
Sbjct: 268 PVTFNVMIN---------------------GFC-------------RAGEVERAKKILDF 293
Query: 553 MDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQE 612
M +G N + L K G + AK + + K+D V YT+++ R E
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 613 EQNERHLMLILGATRHKA 630
L+ + A+R +A
Sbjct: 354 TDEAMKLLGEMKASRCRA 371
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 180/404 (44%), Gaps = 11/404 (2%)
Query: 189 DIDASLSLYKWA-KRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISS 247
+ID +L ++ +A K + N + Y + L+++R FD ++SL ++ ++S
Sbjct: 61 NIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADL-RNSYPPIKCG 119
Query: 248 FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYE 307
+ + +++ A + E + F ++ G K ++ N L+ + + + F++
Sbjct: 120 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN----QRFDLVH 175
Query: 308 SM-----EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDS 362
+M E+ + + T L++ +L K ++ A+K+ E+ + P+ +++++
Sbjct: 176 AMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGG 235
Query: 363 MGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN 422
G +++A ++ EM G P AT Y L++ Y K G+ A + D+M+K PN
Sbjct: 236 YVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN 295
Query: 423 YGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYN 482
Y +++ + K K A ++F++M + F+P S +++ +VD A L+
Sbjct: 296 EVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWR 355
Query: 483 SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGS 542
M P + + ++ L + V A K+ E + ++ + ++ + G
Sbjct: 356 KMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGE 415
Query: 543 VDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLE 586
+ A R M + N F L E KNG + +LE
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 162/361 (44%), Gaps = 7/361 (1%)
Query: 176 NMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDE 235
++ +L L D +++K +K PN LL AL + D ++ + DE
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDE 216
Query: 236 MVQDSSKDGISSFDAYNRVIQ-YLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFL 294
+ S + + Y ++ Y+A+ + +E A +++ G D TY L+ +
Sbjct: 217 I---PSMGLVPNLVTYTTILGGYVARGD-MESAKRVLEEMLDRGWYPDATTYTVLMDGYC 272
Query: 295 NKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
G ++ + + ME + + TY +MI +L K + A +F EM ER+ P
Sbjct: 273 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSS 332
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+ ++D++ + ++D A ++ +M P + ++LI K G++ A +L+DE
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
+K G P+ Y ++ + G+L A +++DM + P TY+ L+E + +G V
Sbjct: 393 EK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNV 451
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVL 534
+++ M G P +T+ + L + A KI + M M VD + ++
Sbjct: 452 KEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI-VSMAVMNGKVDKESWELF 510
Query: 535 M 535
+
Sbjct: 511 L 511
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 143/310 (46%), Gaps = 1/310 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
YN +I A +E + + G + TY +LI + KGL ++ ++E +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ + D Y +++ ++G++ A ++ M E +R + I +SL++ K+G+L
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A +I+ M + L+P Y +L++ Y +AG +D AL+L D+M + P Y ++
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
++ ++ G +S++ M K G + S LLE G + AMKL+ ++ GL
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVL-MVYIKDGSVDLALR 548
T +++ L + V+ A +IL + V L Y K G++ A
Sbjct: 503 LTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFA 562
Query: 549 WLRFMDSSGI 558
+M+ GI
Sbjct: 563 VKEYMERKGI 572
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 192/461 (41%), Gaps = 52/461 (11%)
Query: 177 MTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEM 236
+ IL+ L++ + +A L ++ A +Q + P+ + Y + L+++R++ +S E+
Sbjct: 73 LNSILRRLRL--NPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCEL 130
Query: 237 VQDSS-------------KDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
V + K+ S ++ +++ A+ ++ A F + G
Sbjct: 131 VALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSL 190
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
+ N+L++ + KG + + +Y+ M + + S D T +++ + +SG +D A +E
Sbjct: 191 LSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKE 250
Query: 344 ------------------------------------MKERNIRPSFGIFSSLVDSMGKAG 367
M ER + + ++SL+ K G
Sbjct: 251 TESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKG 310
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
++ A ++ ++ L MY L++ Y + G++ A+R+ D M + G R N +
Sbjct: 311 LMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICN 370
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
++ KSG+L A IF+ M P TY+ L++ + +G VD A+KL + M
Sbjct: 371 SLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK 430
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLA 546
+ P + TY +L + + M G + D +S S +L K G + A
Sbjct: 431 EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490
Query: 547 LRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLET 587
++ + + G+ T+ + + K AK +L+
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 134/314 (42%), Gaps = 1/314 (0%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G + +T N+LI + G ++ +I+ M D TY ++ ++G +D A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
KL +M ++ + P+ ++ L+ + G + ++ M G+ ++L+E+
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
K G + A++LW+ + G + +++ K K++ A I +++ P
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA 540
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
TY L + G + A + M G+ P + Y +++ + ++ A +++
Sbjct: 541 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI 600
Query: 518 EMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
E++A G + V+ L+ + G +D A M GI N I ++ S +
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 577 LYESAKPLLETYVN 590
+ A LL+ V+
Sbjct: 661 KIDEACLLLQKIVD 674
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 136/328 (41%), Gaps = 3/328 (0%)
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
++ V ++ Y +L D ++ + D M++ + + N +I K+
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTT---ICNSLINGYCKS 379
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
+L A F ++ K D TYN L+ + G ++ ++ + M + TY
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
+++ ++ G L++ M +R + S+L++++ K G + AMK++ +
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
GL +I K K++ A + D + +P Y + K G L
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
A ++ ME+ G PT Y+ L+ ++ L + GL P ++TY A++T
Sbjct: 560 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619
Query: 502 LLASKKLVDVAAKILLEMKAMGFSVDVS 529
+ ++D A EM G +++V+
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGITLNVN 647
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 169/428 (39%), Gaps = 45/428 (10%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDS-SKDGISSFDAYNRVIQYLAKA 261
Q VP Y +L ++ F + SL+ M++ + D IS + +++ L K
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISC----STLLEALFKL 484
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
A ++ V G DT T N +I+ ++ EI +++ +C TY
Sbjct: 485 GDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTY 544
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
+ + K G L AF + + M+ + I P+ ++++L+ K L+ + +E+R
Sbjct: 545 QALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRA 604
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
GL P+ Y +LI + G +D A EM + G N + + I S + K+D
Sbjct: 605 RGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDE 664
Query: 442 AM--------------------------------------SIFNDMEKAGFLPTPSTYSC 463
A S+ N K +P Y+
Sbjct: 665 ACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNV 724
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAG-LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAM 522
+ +G+++ A KL++ + ++ P TYT ++ A ++ A + EM
Sbjct: 725 AIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALK 784
Query: 523 GFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
G ++ + L+ + K G+VD A R L + GI N L + +K+G A
Sbjct: 785 GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEA 844
Query: 582 KPLLETYV 589
L E +
Sbjct: 845 MRLKEKMI 852
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 4/273 (1%)
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY 398
+L + KE + P+ +F ++ + G + A+ ++ M +G PS SL+ +
Sbjct: 143 ELVRVFKEFSFSPT--VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 399 TKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA-GFLPT 457
+ G+ AL ++D+M P+ +++V + +SG +D AM + E + G
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
TY+ L+ +A G V+ ++ M+ G+ + TYT+++ K L++ A +
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 518 EMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
+K D VLM Y + G + A+R M G+RTN I L K+G
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 577 LYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
A+ + + + K D Y +++ R
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR 413
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 161/426 (37%), Gaps = 87/426 (20%)
Query: 194 LSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNR 253
LSL+K ++ C LL +AL + DF+ L++ ++ ++ ++ N
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLL-EALFKLGDFNEAMKLWENVL---ARGLLTDTITLNV 511
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME--- 310
+I L K EK+ A V K QTY AL + G ++F + E ME
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 311 --------------------------------AAQCSLDSSTYELMIPSLAKSGRLDVAF 338
A + +TY +I G +D A+
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR------------- 385
EM E+ I + I S + +S+ + ++D A + ++ F L
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA 691
Query: 386 -------------------------PSATMYASLIESYTKAGKLDTALRLW-DEMKKAGF 419
P+ +Y I KAGKL+ A +L+ D + F
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMK 479
P+ YT+++ A +G ++ A ++ ++M G +P TY+ L++ G VD A +
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 811
Query: 480 LYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIK 539
L + + G+ P TY ++ L V A ++ +M G V SD K
Sbjct: 812 LLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL---VRGSD------K 862
Query: 540 DGSVDL 545
G VD+
Sbjct: 863 QGDVDI 868
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D TY ++I A +G ++ AF L EM + I P+ +++L+ + K G +D A ++
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
++ G+ P+A Y +LI+ K+G + A+RL ++M + G +V + K
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG----------LVRGSDKQ 863
Query: 437 GKLDTAMSIFNDME 450
G +D + D E
Sbjct: 864 GDVDIPKEVVLDPE 877
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D T ++ + SL ++GR+D A L +E+ E++ P ++ L+ + K L +
Sbjct: 158 DQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFV 217
Query: 377 MEMRG-FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
EMR F ++P + LI++ + L A+ L ++ AGF+P+ LY I++
Sbjct: 218 DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
K A+ ++ M++ G P TY+ L+ + +G+V+ A +M +AG P +T
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 496 YTAILTLLASKKLVDVAAKILLEMKAMGFSV-DVSASDVLMVYIKDGSVDLALRWLRFMD 554
YT+++ + K A +L EM+A G + D + + +L K +D + M
Sbjct: 338 YTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMK 397
Query: 555 SSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSI 603
SSG++ + L S +K+G A + + V+S + D Y+++
Sbjct: 398 SSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 4/258 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQD-SSKDGISSFDAYNRVIQYLAKAEKLEL 266
P+ Y L L + +D + DEM D K + SF +I + ++ L
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI---LIDNVCNSKNLRE 248
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A K+ +G K D YN ++ F ++ +Y+ M+ D TY +I
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF 308
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
L+K+GR++ A + M + P ++SL++ M + G A+ + EM G P
Sbjct: 309 GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAP 368
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
+ Y +L+ KA +D + L++ MK +G + Y +V S KSGK+ A +F
Sbjct: 369 NDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Query: 447 NDMEKAGFLPTPSTYSCL 464
+ + L S YS L
Sbjct: 429 DYAVDSKSLSDASAYSTL 446
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 170/392 (43%), Gaps = 19/392 (4%)
Query: 171 LQFLPNMTHILQALKIVNDIDASLSLYKWA-KRQSWYVPNEECYLLLFDALNQSRD--FD 227
L+F ++ ++ +VND ++ L++ K Q + P +L+L ++ D
Sbjct: 85 LKFHNSVLQSYGSIAVVND---TVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSIS 141
Query: 228 AIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYN 287
+ + + MV + + + D ++ L + +++ A K++ DT TYN
Sbjct: 142 NVHRVLNLMVNNGLEPDQVTTDI---AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 288 ALITLFLNKGLPYKSFEIYESM-EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
L+ + +E + M + D ++ ++I ++ S L A L ++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+P ++++++ + A+ +Y +M+ G+ P Y +LI +KAG+++
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
A M AG+ P+ YT ++ + G+ A+S+ +ME G P TY+ LL
Sbjct: 319 ARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLH 378
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSV 526
+ +D M+LY M ++G++ + Y ++ L + K+ + ++V
Sbjct: 379 GLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVK------SGKVAEAYEVFDYAV 432
Query: 527 DVSASDVLMVYIKDGSVDLALRWLRFMDSSGI 558
D + Y +++ L+WL+ G+
Sbjct: 433 DSKSLSDASAY---STLETTLKWLKKAKEQGL 461
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 181/386 (46%), Gaps = 14/386 (3%)
Query: 161 GPELETHLDKLQFLPNMTHILQAL--KIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFD 218
G LE+ LD+ P++ ++ AL ++ + S++KWA+ + + + + + +
Sbjct: 85 GSSLESALDETGIEPSV-ELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVN 143
Query: 219 ALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSG 278
+L ++R+F+ SL + V+ + S D + +I+ A+A ++ A F+ +
Sbjct: 144 SLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYE 203
Query: 279 GKVDTQTYNALITLFLNKGLPYKSFEIYES---MEAAQCSLDSS------TYELMIPSLA 329
+ T L+ + L+ K + E+ +E ++DS+ + +++
Sbjct: 204 PVCKSATELRLLEVLLDALC--KEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWF 261
Query: 330 KSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
+S +L A KL++EMK N++P+ + +L++ + R+ AM++ EM+ + +
Sbjct: 262 RSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFM 321
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
++ +I+ +AG+L AL + + P Y +V++ K+G L A I M
Sbjct: 322 VFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
G PT +TY+ + + + + M LY + AG P TY IL +L +
Sbjct: 382 MTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKL 441
Query: 510 DVAAKILLEMKAMGFSVDVSASDVLM 535
+A ++ EMK G D+ + +L+
Sbjct: 442 SLAMQVNKEMKNRGIDPDLLTTTMLI 467
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 136/301 (45%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
+L DAL + + + + + S +N ++ ++ KL+ A ++++
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
+ K TY LI + + E+ E M+ A+ ++ + +I L ++GRL
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
A + + P+ ++SLV + KAG L A KI M G+ P+ T Y
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
+ ++K K + + L+ ++ +AG P+ Y LI++ + GKL AM + +M+ G
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
P T + L+ + ++ A + +++ G+ P T+ I L SK + D+A +
Sbjct: 457 DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKR 516
Query: 515 I 515
+
Sbjct: 517 L 517
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 200/448 (44%), Gaps = 16/448 (3%)
Query: 139 KKPFMNVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYK 198
K+P N T+ + + +R++ L+ ++D + L ++ H Q K ++ + LS YK
Sbjct: 61 KQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASI-HQTQNEK---ELFSLLSTYK 116
Query: 199 WAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYL 258
+ + L++ D+ +L D V + +K S F AYN V++ +
Sbjct: 117 ---------DRQLSIRFMVSLLSRENDWQRSLALLD-WVHEEAKYTPSVF-AYNVVLRNV 165
Query: 259 AKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDS 318
+A++ ++A F +++ D TY+ LIT F +G+ + + ME + S D
Sbjct: 166 LRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDL 225
Query: 319 STYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
Y +I + A +F +K I P ++S+++ GKA A + E
Sbjct: 226 VLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKE 285
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
M G+ P+ Y++L+ Y + K AL ++ EMK+ + ++++ +
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 345
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
+ A +F + K P +Y+ +L ++ + A+ L+ M + + TY
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSG 557
++ + + A ++ EM++ G + ++ S ++ ++ K G +D A + + SSG
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 558 IRTNNFIIRQLFESCMKNGLYESAKPLL 585
+ + + + + + + GL AK LL
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 145/317 (45%), Gaps = 7/317 (2%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
+PN Y L ++ F S+F EM + + +++ + V L ++ +
Sbjct: 292 LPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADR 351
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
F +K+ V +YN ++ ++ L ++ ++ M+ + TY MI
Sbjct: 352 LFWSLRKMDIEPNVV---SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
K+ + A L QEM+ R I P+ +S+++ GKAG+LD A ++ ++R G+
Sbjct: 409 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 468
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
+Y ++I +Y + G + A RL E+K P T++ AK+G+ + A +F
Sbjct: 469 DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITIL----AKAGRTEEATWVF 524
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
++G + S + C++ +++ + + + ++++ M AG P + +L +
Sbjct: 525 RQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQ 584
Query: 507 KLVDVAAKILLEMKAMG 523
+ + A + EM+ G
Sbjct: 585 REFEKADTVYREMQEEG 601
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 141/306 (46%), Gaps = 9/306 (2%)
Query: 225 DFDAIQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
D+ S+F + + GI+ AYN +I KA+ A K++ +G +T
Sbjct: 240 DYSKAISIFSRL----KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNT 295
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
+Y+ L+++++ ++ ++ M+ C+LD +T +MI + + A +LF
Sbjct: 296 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 355
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
+++ +I P+ +++++ G+A A+ ++ M+ + + Y ++I+ Y K +
Sbjct: 356 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
+ A L EM+ G PN Y+ I+ K+GKLD A ++F + +G Y
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
++ + G + A +L + + L + TAI T+LA + A + + G
Sbjct: 476 MIVAYERVGLMGHAKRLLHELK---LPDNIPRETAI-TILAKAGRTEEATWVFRQAFESG 531
Query: 524 FSVDVS 529
D+S
Sbjct: 532 EVKDIS 537
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 10/260 (3%)
Query: 236 MVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFL 294
+VQ+ GI + Y+ +I KA KL+ A F+K++ SG ++D Y +I +
Sbjct: 422 LVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYE 481
Query: 295 NKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
GL + + ++ D+ E I LAK+GR + A +F++ E
Sbjct: 482 RVGLMGHAKRLLHELKLP----DNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDIS 537
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+F +++ + R ++++ +MR G P + + A ++ +Y K + + A ++ EM
Sbjct: 538 VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597
Query: 415 KKAG--FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASG 472
++ G F L + S+ K + S+F +E + + + + ++ +
Sbjct: 598 QEEGCVFPDEVHFQMLSLYSSKKD--FEMVESLFQRLESDPNVNSKELHLVVAALYERAD 655
Query: 473 QVDSAMKLYNSMTNAG-LRP 491
+++ A ++ N M G L+P
Sbjct: 656 KLNDASRVMNRMRERGILKP 675
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Query: 289 LITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER- 347
++ L+ G+ + ++++ M C ++ ++ + S +LD A K F+E+ E+
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA 407
I P +++++ ++ + G +D + I+ E+ G P + +L+E + +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEM 467
R+WD MK PN Y V ++ K A+++ + M+ G P TY+ L+
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 468 HAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLE 518
+ ++ MK YN M GL P TY ++ LL K +D A ++ E
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 132/298 (44%), Gaps = 6/298 (2%)
Query: 231 SLFDEMVQDSSK-DGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNAL 289
S DE++Q K D I S D R++ + E A F ++ + +++NAL
Sbjct: 104 STIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNAL 163
Query: 290 ITLFLNKGLPYKSFEIYESM-EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERN 348
++ ++N ++ + ++ + E + D TY MI +L + G +D +F+E+++
Sbjct: 164 LSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNG 223
Query: 349 IRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTAL 408
P F++L++ + +I+ M+ L P+ Y S + T+ K AL
Sbjct: 224 FEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDAL 283
Query: 409 RLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMH 468
L D MK G P+ Y ++ + L+ M +N+M++ G P TY L+ +
Sbjct: 284 NLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLL 343
Query: 469 AASGQVDSAMKLYNSMTNAGL--RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
G +D A+++ L RP M Y ++ L +D A +++ K +
Sbjct: 344 CKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKIDEATQLVKNGKLQSY 399
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 190 IDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
+D ++ +K + P+ Y + AL + D I S+F+E+ ++ + + SF+
Sbjct: 173 LDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFN 232
Query: 250 --------------------------------AYNRVIQYLAKAEKLELAFCCFKKVQGS 277
+YN ++ L + +K A ++
Sbjct: 233 TLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTE 292
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G D TYNALIT + + + Y M+ + D+ TY ++IP L K G LD A
Sbjct: 293 GISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI 375
++ +E + + ++ +V+ + AG++D A ++
Sbjct: 353 VEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 101/233 (43%), Gaps = 3/233 (1%)
Query: 329 AKSGRLDVAFKLFQEMKE-RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+K+ +L + F+ E + R G++S+ + + +A + T ++ + F S
Sbjct: 62 SKNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKS 121
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
++ Y +G + A +L+DEM + + ++ + S KLD AM F
Sbjct: 122 EDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFK 181
Query: 448 DM-EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
++ EK G P TY+ +++ G +D + ++ + G P + ++ +L +
Sbjct: 182 ELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRR 241
Query: 507 KLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGI 558
+L +I MK+ S ++ S + + ++ AL + M + GI
Sbjct: 242 ELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGI 294
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
+Q G D +YN LI+ L G + Y+ M D +T+ +M+ S K G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
+ KL+ +MK I+PS + +V + + G+++ A+ I +M + P+ T Y
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+++ +K + D + + + G + + +Y ++ + K G A + DME G
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
F+P T++ L+ + V A+ Y+ M AG+ P ++TY I+ L+ L+
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 514 KILLEMKAMGFSVD 527
K L EMK+ G D
Sbjct: 769 KWLSEMKSRGMRPD 782
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 115/266 (43%), Gaps = 16/266 (6%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y + D ++ + DAI + ++ K S YN +I L K + A
Sbjct: 641 PNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIK---LSRQVYNTLIATLCKLGMTKKA 697
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
++ G DT T+N+L+ + K+ Y M A S + +TY +I
Sbjct: 698 AMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRG 757
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L+ +G + K EMK R +RP +++L+ K G + +M IY EM GL P
Sbjct: 758 LSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPK 817
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY-TLI-----------VESNAK 435
+ Y LI + GK+ A L EM K G PN Y T+I VE N K
Sbjct: 818 TSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKK 877
Query: 436 SGKLDTAMSIFNDM-EKAGFLPTPST 460
+ L A + +M E+ G++P T
Sbjct: 878 AMYLAEAKGLLKEMVEEKGYIPCNQT 903
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 14/313 (4%)
Query: 199 WA---KRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVI 255
WA R+ P+ + ++ ++ + D + I L+D+M K + S N V+
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSC---NIVV 615
Query: 256 QYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKS----FEIYESMEA 311
L + K+E A ++ + TY +FL+ +K F+ +E++ +
Sbjct: 616 GMLCENGKMEEAIHILNQMMLMEIHPNLTTYR----IFLDTSSKHKRADAIFKTHETLLS 671
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
L Y +I +L K G A + +M+ R P F+SL+ +
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
A+ Y M G+ P+ Y ++I + AG + + EMK G RP+ Y ++
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
AK G + +M+I+ +M G +P STY+ L+ A G++ A +L M G+ P
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851
Query: 492 GMSTYTAILTLLA 504
STY +++ L
Sbjct: 852 NTSTYCTMISGLC 864
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 114/260 (43%)
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
+ K++ G K + N ++ + G ++ I M + + +TY + + + +K
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
R D FK + + I+ S ++++L+ ++ K G A + +M G P
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
+ SL+ Y + AL + M +AG PN Y I+ + +G + ++M+
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
G P TY+ L+ A G + +M +Y M GL P STY +++ A+ +
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 511 VAAKILLEMKAMGFSVDVSA 530
A ++L EM G S + S
Sbjct: 836 QARELLKEMGKRGVSPNTST 855
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 161/356 (45%), Gaps = 8/356 (2%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
YN VI L + + A+ ++ G DT +YN LI F G +F +++
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG----NFVRAKAL 218
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
L+ T+ +++ S ++ A++ +M P FSS+++ + K G++
Sbjct: 219 VDEISELNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKV 275
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ EM + P+ Y +L++S KA AL L+ +M G + +YT++
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVL 335
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
++ K+G L A F + + +P TY+ L++ +G + SA + M +
Sbjct: 336 MDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSV 395
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALR 548
P + TY++++ K +++ A +L +M+ + + V+ K G ++A+
Sbjct: 396 IPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIE 455
Query: 549 WLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ M G+ NN+I+ L + G + K L++ V+ +D + YTS++
Sbjct: 456 LSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 3/316 (0%)
Query: 220 LNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGG 279
L+ + AI+ + +MV + +F + +I L K K+ ++++
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSS---IINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
+ TY L+ + + +Y M +D Y +++ L K+G L A K
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
F+ + E N P+ +++LVD + KAG L +A I +M + P+ Y+S+I Y
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
K G L+ A+ L +M+ PN Y +++ K+GK + A+ + +M G
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
L+ G++ L M + G+ YT+++ + + A EM
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 520 KAMGFSVDVSASDVLM 535
+ G DV + +VL+
Sbjct: 531 QERGMPWDVVSYNVLI 546
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 142/313 (45%), Gaps = 2/313 (0%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+YN +I + K K+ A +K ++ G + D T+N ++ +G ++++ M
Sbjct: 541 SYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 599
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
++ + +++ L ++G+++ A + +M I P+ + +D+ K R
Sbjct: 600 KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRA 659
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
D K + + +G++ S +Y +LI + K G A + +M+ GF P+ + +
Sbjct: 660 DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSL 719
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + A+S ++ M +AG P +TY+ ++ + +G + K + M + G+
Sbjct: 720 MHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM 779
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALR 548
RP TY A+++ A + + I EM A G S +VL+ + G + A
Sbjct: 780 RPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARE 839
Query: 549 WLRFMDSSGIRTN 561
L+ M G+ N
Sbjct: 840 LLKEMGKRGVSPN 852
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 148/363 (40%), Gaps = 30/363 (8%)
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE-IYESMEAAQCSLDSSTYELMI 325
A C F V D++ +N+LI F GL + IY M A S D ++I
Sbjct: 83 AMCTFGVVP------DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
S K GRL A L ++ R I +++++ + + G D A + EM G+
Sbjct: 137 HSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P Y +LI+ + K G A L DE+ + N +T+++ S ++ A
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSYYNLHAIEEA--- 246
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+ DM +GF P T+S ++ G+V L M + P TYT ++ L
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFI 564
+ A + +M G VD+ VLM + K G + A + + + N
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVT 366
Query: 565 IRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL------------AHLVRCQE 612
L + K G SA+ ++ + + ++V Y+S++ L+R E
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Query: 613 EQN 615
+QN
Sbjct: 427 DQN 429
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 34/344 (9%)
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
+ K+ G D N LI F G SF I + S+D+ TY +I L +
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVG--RLSFAI-SLLRNRVISIDTVTYNTVISGLCE 173
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG----------------------- 367
G D A++ EM + I P +++L+D K G
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 233
Query: 368 -----RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN 422
L + Y +M G P ++S+I K GK+ L EM++ PN
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 423 YGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYN 482
+ YT +V+S K+ A+++++ M G Y+ L++ +G + A K +
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 483 SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM--KAMGFSVDVSASDVLMVYIKD 540
+ P + TYTA++ L + A I+ +M K++ +V V+ S ++ Y+K
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNV-VTYSSMINGYVKK 412
Query: 541 GSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
G ++ A+ LR M+ + N F + + K G E A L
Sbjct: 413 GMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 33/275 (12%)
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL-DTALRLWDEMKKAGFRPNYGLY 426
RL A + M FG+ P + ++ SLI + G + D ++ +M G P+
Sbjct: 73 RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 132
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
+++ S K G+L A+S+ + + + T TY+ ++ G D A + + M
Sbjct: 133 NVLIHSFCKVGRLSFAISLLRN--RVISIDT-VTYNTVISGLCEHGLADEAYQFLSEMVK 189
Query: 487 AGLRPGMSTYTAIL-------TLLASKKLVD-------VAAKILL--------------E 518
G+ P +Y ++ + +K LVD + ILL +
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRD 249
Query: 519 MKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGL 577
M GF D V+ S ++ K G V LR M+ + N+ L +S K +
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 309
Query: 578 YESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQE 612
Y A L V VDLV+YT ++ L + +
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 155/364 (42%), Gaps = 5/364 (1%)
Query: 244 GISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSF 303
G+ YN +I L K + A + + SG D TYN +I + G ++
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 304 EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSM 363
++ C TY +++ + + A ++ ++M P ++SLV+
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
+ G L+ + + GL + Y +L+ S D + + M + + P
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTV 349
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
Y +++ K+ L A+ F M + LP TY+ +L + G VD A++L
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGL 409
Query: 484 MTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG-FSVDVSASDVLMVYIKDGS 542
+ N PG+ TY +++ LA K L+ A ++ +M G F D++ ++ + +
Sbjct: 410 LKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANL 469
Query: 543 VDLALRWLRFMDS--SGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLY 600
V+ A + L+ + +GIR + + R + + K E A ++E + K D +Y
Sbjct: 470 VEEAGQVLKETSNRGNGIRGSTY--RLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIY 527
Query: 601 TSIL 604
T+I+
Sbjct: 528 TAIV 531
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D T ++ +L +G+L A KL + M N P F S+LV + + +LD AM I
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
M G P Y +I + K G + TAL L ++M +G P+ Y ++
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
G + A+ + D + G P TY+ L+E+ A+++ M G P + TY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
+++ + ++ A ++ + + G ++ + L+
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
TYN LI L ++ + + M +C D TY ++ +++K G +D A +L +
Sbjct: 351 TYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLL 410
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
K P ++S++D + K G + A+++Y +M G+ P SLI + +A +
Sbjct: 411 KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLV 470
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
+ A ++ E G Y L+++ K +++ A+ + M G P + Y+ +
Sbjct: 471 EEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAI 530
Query: 465 LE 466
++
Sbjct: 531 VK 532
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 7/227 (3%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFK 272
Y L +L +D ++ + + M Q S + YN +I L KA L A F
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSY---CPTVITYNILINGLCKARLLSRAIDFFY 373
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
++ D TYN ++ +G+ + E+ ++ C TY +I LAK G
Sbjct: 374 QMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKG 433
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM--RGFGLRPSATM 390
+ A +L+ +M + I P SL+ +A ++ A ++ E RG G+R S
Sbjct: 434 LMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGST-- 491
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG 437
Y +I+ K +++ A+ + + M G +P+ +YT IV+ + G
Sbjct: 492 YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 86/200 (43%), Gaps = 3/200 (1%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
Q+ Y P Y +L + L ++R F +M++ I + YN V+ ++K
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVT---YNTVLGAMSKEG 398
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
++ A ++ + TYN++I KGL K+ E+Y M A D T
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRR 458
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
+I ++ ++ A ++ +E R + ++ + K ++ A+++ M
Sbjct: 459 SLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG 518
Query: 383 GLRPSATMYASLIESYTKAG 402
G +P T+Y ++++ + G
Sbjct: 519 GCKPDETIYTAIVKGVEEMG 538
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 5/261 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGI-SSFDAYNRVIQYLAKAEKLEL 266
P YL+L AL ++ F S D ++ DG+ SS +YN VI L KA ++E
Sbjct: 388 PGFNGYLVLVQALLNAQRF----SEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIEN 443
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A ++Q G + T+N ++ + +G K + E + D T+ L+I
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIIN 503
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
L ++ + AF F+EM E I P+ ++ L+ S G D ++K++ +M+ GL P
Sbjct: 504 CLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSP 563
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
Y + I+S+ K K+ A L M + G +P+ Y+ ++++ ++SG+ A +F
Sbjct: 564 DLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMF 623
Query: 447 NDMEKAGFLPTPSTYSCLLEM 467
+ +E+ G +P T + E+
Sbjct: 624 SSIERHGCVPDSYTKRLVEEL 644
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 160/406 (39%), Gaps = 36/406 (8%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN VI L K+ L+LA+ F++++ G K D TYN LI KG+ ++ + + ME
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS--------FGIFSS---- 358
+ TY ++I +GR+D A K + M+ R + P+ GIF
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPC 302
Query: 359 -----LVDSMGKAGRLD---------------TAMKIYMEMRGFGLR---PSATMYASLI 395
LV M K L A + +R G R P ++ + + +
Sbjct: 303 KAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAM 362
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
K L R++D G +P + Y ++V++ + + M G L
Sbjct: 363 SCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLL 422
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
+ +Y+ +++ + ++++A M + G+ P + T+ L+ + + V +
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV 482
Query: 516 LLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMK 574
L ++ GF DV + S ++ + + A + M GI N L SC
Sbjct: 483 LEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCS 542
Query: 575 NGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLM 620
G + + L + DL Y + + + ++ + L+
Sbjct: 543 TGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELL 588
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 118/257 (45%)
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
+K+ G D+ T+NA ++ L ++ I++ + + Y +++ +L
Sbjct: 343 LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLN 402
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
+ R + ++M + S +++++D + KA R++ A EM+ G+ P+
Sbjct: 403 AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
+ + + Y+ G + + +++ GF+P+ ++LI+ ++ ++ A F +M
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML 522
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
+ G P TY+ L+ ++G D ++KL+ M GL P + Y A + + V
Sbjct: 523 EWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVK 582
Query: 511 VAAKILLEMKAMGFSVD 527
A ++L M +G D
Sbjct: 583 KAEELLKTMLRIGLKPD 599
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 158/382 (41%), Gaps = 44/382 (11%)
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
K+++ SG ++ + LI + GL +++ + + Y +I +L K
Sbjct: 133 LKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVK 192
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
S LD+A+ FQ+M+ +P ++ L+ + K G +D A+++ +M G RP+
Sbjct: 193 SNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFT 252
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPN--------YGLYTLI------------- 429
Y LI+ + AG++D AL+ + M+ PN +G++ +
Sbjct: 253 YTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFM 312
Query: 430 -VESNAKSGKLDTAMSIF--NDMEKA-----------GFLPTPSTY----SCLLEMHAAS 471
+SN + D + N M K G++P ST+ SCLL+ H
Sbjct: 313 EKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGH--- 369
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV-SA 530
+ ++++ + G++PG + Y ++ L + + + L +M G V S
Sbjct: 370 -DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSY 428
Query: 531 SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVN 590
+ V+ K ++ A +L M GI N G + +LE +
Sbjct: 429 NAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLV 488
Query: 591 SAAKVDLVLYTSILAHLVRCQE 612
K D++ ++ I+ L R +E
Sbjct: 489 HGFKPDVITFSLIINCLCRAKE 510
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 138/327 (42%), Gaps = 19/327 (5%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
Y+P+ + L + D +FD V K G F+ Y ++Q L A++
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPG---FNGYLVLVQALLNAQRFS 407
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
K++ G +YNA+I + M+ S + T+ +
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+ G + + +++ +P FS +++ + +A + A + EM +G+
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P+ Y LI S G D +++L+ +MK+ G P+ Y ++S K K+ A +
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
M + G P TYS L++ + SG+ A ++++S+ G P +YT
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP--DSYT-------- 637
Query: 506 KKLVDVAAKILLEMKAMGFSVD-VSAS 531
K+LV+ L+++ G S + VSAS
Sbjct: 638 KRLVEE-----LDLRKSGLSRETVSAS 659
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 124/303 (40%), Gaps = 1/303 (0%)
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
Y+A++ N + ++ + + DSST+ + L K L ++F
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
R ++P F + LV ++ A R + +M GL S Y ++I+ KA +++
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A EM+ G PN + + + G + + + GF P T+S ++
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
+ ++ A + M G+ P TY ++ S D + K+ +MK G S
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 526 VDVSASD-VLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
D+ A + + + K V A L+ M G++ +NF L ++ ++G A+ +
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 585 LET 587
+
Sbjct: 623 FSS 625
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 91/179 (50%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D S ++ +L + G L ++ +L +E+++ R S + L+ S G+ G ++
Sbjct: 109 DQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVF 168
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
++ G++PS +Y ++I++ K+ LD A + +M+ G +P+ Y +++ K
Sbjct: 169 AQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK 228
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
G +D A+ + ME+ G P TY+ L++ +G+VD A+K M L P +T
Sbjct: 229 GVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 153/347 (44%), Gaps = 40/347 (11%)
Query: 232 LFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT 291
L D M+++ + D + +N ++Q K +K+E A+ KK++ G + DT TYN + T
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 292 LFLNKGLPYKS-FEIYESMEAAQ-CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNI 349
++ KG ++ E+ E M + + T +++ + GR+ + + MKE +
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 350 RPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALR 409
+ +F+SL++ + D ++ M+ ++ Y++++ +++ AG ++ A +
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 410 LWDEMKKAGFRPNYGLY---------------------TLIVESN-------------AK 435
++ EM KAG +P+ Y TLIVES
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCS 411
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
+G +D AM +FN M K G P T+ L+ + Q A ++ M G++P ST
Sbjct: 412 NGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENST 471
Query: 496 YTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGS 542
+ + L D + K + +K D+ + + +Y K S
Sbjct: 472 FLLLAEAWRVAGLTDESNKAINALKCK----DIEIAKLEKLYQKQSS 514
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 175/416 (42%), Gaps = 57/416 (13%)
Query: 213 YLLLFDALNQSRDFDAIQSLFDEMVQDSSK-DGISSFDAYNRVIQYLAKAEKLELAFCCF 271
Y L A+ + + +I S+ E+ Q +K D I +N VI +++ +E A
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSI----FFNAVINAFSESGNMEDAVQAL 138
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM-EAAQCSLDSS--TYELMIPSL 328
K++ G T TYN LI + G P +S E+ + M E + + T+ +++ +
Sbjct: 139 LKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAW 198
Query: 329 AKSGRLDVAFKLFQEMKERNIRP---SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
K +++ A+++ ++M+E +RP ++ ++ G+ R ++ + M M+ +
Sbjct: 199 CKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA-K 257
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY------------------- 426
P+ ++ Y + G++ LR MK+ N ++
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 427 -TLIVESNAK---------------SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
TL+ E N K +G ++ A +F +M KAG P YS L + +
Sbjct: 318 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 377
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
+ + A +L ++ RP + +T +++ S +D A ++ +M G S ++
Sbjct: 378 AKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 436
Query: 531 SDVLMVYIKDGSVDLALRW-----LRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
+ LM G +++ W L+ M G++ N L E+ GL + +
Sbjct: 437 FETLMW----GYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 488
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/364 (18%), Positives = 158/364 (43%), Gaps = 15/364 (4%)
Query: 270 CFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLA 329
C V+GS + ++ L+ + + +G P+++ +++++ +Y ++ ++
Sbjct: 33 CKSCVEGSSCRT-VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT 91
Query: 330 KSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
+ + E+++ + F++++++ ++G ++ A++ ++M+ GL P+ +
Sbjct: 92 VQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTS 151
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAG---FRPNYGLYTLIVESNAKSGKLDTAMSIF 446
Y +LI+ Y AGK + + L D M + G PN + ++V++ K K++ A +
Sbjct: 152 TYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVV 211
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQ-VDSAMKLYNSMT-NAGLRPGMSTYTAILTLLA 504
ME+ G P TY+ + + G+ V + ++ M +P T ++
Sbjct: 212 KKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYC 271
Query: 505 SKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALR-----WLRFMDSSGIR 559
+ V + + MK M V A+ V+ + +G V++ R L M ++
Sbjct: 272 REGRVRDGLRFVRRMKEM----RVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVK 327
Query: 560 TNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHL 619
+ + + G E A + + V + K D Y+ + VR +E + L
Sbjct: 328 ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 387
Query: 620 MLIL 623
+ L
Sbjct: 388 LETL 391
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 165/411 (40%), Gaps = 65/411 (15%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYV-PNEECYLLLFDALNQSRDFDAIQSLFDEMVQ 238
I+ + + D ++L+L +K + ++ P+ Y + D L + Q LF EM++
Sbjct: 267 IVNGMCKMGDTKSALNL--LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 239 ----------DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNA 288
+ DG SF ++ + L + E+ D T+NA
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-------------NPDVLTFNA 371
Query: 289 LITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERN 348
LI+ + +G +++ ++ + M D+ TY MI K R D A +F M
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 349 IRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTAL 408
P F++++D +A R+D M++ E+ GL + T Y +LI + + L+ A
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 409 RLWDEMKKAGFRPN--------YGL---------------------------YTLIVESN 433
L+ EM G P+ YG Y +I+
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
K K+D A +F + G P TY+ ++ + A L++ M + G P
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 494 STYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVD 544
STY ++ +D + +++ EM++ GFS D ++ I DG +D
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLD 658
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 157/365 (43%), Gaps = 25/365 (6%)
Query: 217 FDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQG 276
F +L+ + DF FD MV+ S+ ++ D N+VI + + ++A ++K++
Sbjct: 84 FKSLDDAIDF------FDYMVR--SRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEI 134
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
++ ++N LI F + S + + D T+ ++ L R+
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 337 AFKLF---------------QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG 381
A LF +M E + P F++L++ + GR+ A + +M G
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
GL Y +++ K G +AL L +M++ +P+ +Y+ I++ K G
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
A +F++M + G P TY+C+++ + G+ A +L M + P + T+ A+++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 502 LLASKKLVDVAAKILLEM-KAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRT 560
+ + A K+ EM F V+ + ++ + K D A M S + T
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT 434
Query: 561 NNFII 565
N II
Sbjct: 435 FNTII 439
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 131/354 (37%), Gaps = 49/354 (13%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
N +I +F+ P + +Y ME + L+ ++ ++I +L + F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKI--YMEMRGF-------------GLRPSATMY 391
+P F++L+ + R+ A+ + YM GF GL P +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
+LI G++ A L ++M G + Y IV K G +A+++ + ME+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
P YS +++ G A L++ M G+ P + TY ++
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID---------- 339
Query: 512 AAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
GF SD A R LR M I + L +
Sbjct: 340 -----------GFCSFGRWSD-------------AQRLLRDMIEREINPDVLTFNALISA 375
Query: 572 CMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLMLILGA 625
+K G A+ L + ++ D V Y S++ + + +H+ ++ +
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
>AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) |
chr5:9605650-9609625 FORWARD
Length = 1038
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 1/302 (0%)
Query: 264 LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYEL 323
LE A+ F + G T + L+ N+G ++ I + LD+ Y
Sbjct: 720 LEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNT 779
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
+I ++ ++G+L A ++++ M + S +++++ G+ +LD A++I+ R G
Sbjct: 780 LIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSG 839
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
L +Y ++I Y K GK+ AL L+ EM+K G +P Y ++V+ A S
Sbjct: 840 LYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVD 899
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
+ ME+ G STY L++++A S Q A K + G+ S ++++L+ L
Sbjct: 900 ELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSAL 959
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSAS-DVLMVYIKDGSVDLALRWLRFMDSSGIRTNN 562
+++ A + +M G S D + +L Y+ G + + + M S + +
Sbjct: 960 VKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDR 1019
Query: 563 FI 564
F+
Sbjct: 1020 FV 1021
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 166/395 (42%), Gaps = 13/395 (3%)
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSK-DGISSFDAYNRV 254
+ W K Q Y P+ Y ++ Q + F EM++ + D + A +
Sbjct: 174 FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAV----ACGTM 229
Query: 255 IQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQC 314
+ A+ + +K VQ + T YN +++ K K +++ M
Sbjct: 230 LCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGV 289
Query: 315 SLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMK 374
+ TY L++ S AK G + A K F EMK P +SS++ KAG + A+
Sbjct: 290 PPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIG 349
Query: 375 IYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNA 434
+Y +MR G+ PS A+++ Y K AL L+ +M++ + + LI+
Sbjct: 350 LYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYG 409
Query: 435 KSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMS 494
K G A S+F + E+ L TY + ++H SG V A+ + M +
Sbjct: 410 KLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRF 469
Query: 495 TYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMD 554
Y +L A + VD A + + G S +D+L +Y + ++L + F+
Sbjct: 470 AYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTR---LNLGEKAKGFIK 526
Query: 555 SSGIRTNNFIIRQLFESCM----KNGLYESAKPLL 585
+ +F I +L+++ M K G+ A+ L+
Sbjct: 527 QIMVDQVHFDI-ELYKTAMRVYCKEGMVAEAQDLI 560
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 3/291 (1%)
Query: 309 MEAAQ--CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
ME+A+ C + T +++ +L G+ A + + E+NI +++L+ +M +A
Sbjct: 728 MESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEA 787
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
G+L A +IY M G+ S Y ++I Y + +LD A+ ++ +++G + +Y
Sbjct: 788 GKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIY 847
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
T ++ K GK+ A+S+F++M+K G P +Y+ ++++ A S +L +M
Sbjct: 848 TNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMER 907
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF-SVDVSASDVLMVYIKDGSVDL 545
G +STY ++ + A A K + +K G S +L +K G ++
Sbjct: 908 NGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEE 967
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVD 596
A R M +GI ++ R + + M G E E + S+ + D
Sbjct: 968 AERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 139/332 (41%), Gaps = 37/332 (11%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
N +I+ F+ +G K+ I + + ++ T +I + +L A +L+ E
Sbjct: 639 NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGE 698
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM---------------- 390
P + S++D+ + G L+ A ++ME G P A
Sbjct: 699 SKT-PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHRE 757
Query: 391 -------------------YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
Y +LI++ +AGKL A +++ M +G + Y ++
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
+ +LD A+ IF++ ++G Y+ ++ + G++ A+ L++ M G++P
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWL 550
G +Y ++ + A+ +L ++L M+ G D+S L+ VY + A + +
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Query: 551 RFMDSSGIRTNNFIIRQLFESCMKNGLYESAK 582
+ GI ++ L + +K G+ E A+
Sbjct: 938 TLVKEKGIPLSHSHFSSLLSALVKAGMMEEAE 969
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY-KSFEIYES 308
YN +I+ + +A KL+ A ++++ SG QTYN +I+++ +GL K+ EI+ +
Sbjct: 776 GYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY-GRGLQLDKAIEIFSN 834
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP---SFGIF--------- 356
+ LD Y MI K G++ A LF EM+++ I+P S+ +
Sbjct: 835 ARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRL 894
Query: 357 ----SSLVDSMGKAGRLD------TAMKIYMEMRGF-------------GLRPSATMYAS 393
L+ +M + GR T +++Y E F G+ S + ++S
Sbjct: 895 HHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSS 954
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
L+ + KAG ++ A R + +M +AG P+ I++ G + + + M ++
Sbjct: 955 LLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSS 1014
Query: 454 FLPTPSTYSCLLEMHAASGQ 473
S + +++ A G+
Sbjct: 1015 VEDDRFVSSVVEDLYKAVGK 1034
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 155/376 (41%), Gaps = 43/376 (11%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
+YN++I + + + ++ D TY +++ L K D AF + M
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
+E +RP+ I+SS++ S+GK GR+ A + + +M G++P Y +I +Y + G++
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
D A L +E+ K RP+ YT+++ K G ++ + M + G P Y+ L
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT----------------------- 501
+ G + L+ M ++ Y +L+
Sbjct: 694 IGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKL 753
Query: 502 ---LLASKKLVDVAAKILLEMKAMGFSVDVSA-------------SDVLMVYIKDGSVDL 545
L+ +K LV + + L + F+++V + ++ Y G +D
Sbjct: 754 LQRLIRTKPLVSIPSS-LGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDE 812
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
A L M GI N L +S ++ G ESA L E + + D V+Y+++L
Sbjct: 813 AYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLK 869
Query: 606 HLVRCQEEQNERHLML 621
L + + LML
Sbjct: 870 GLCDFKRPLDALALML 885
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 40/319 (12%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
VP+ + L + R FD ++ D ++ S ++ + V+ L ++
Sbjct: 128 VPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYA---PSRNSSSLVVDELCNQDRFLE 184
Query: 267 AFCCFKKVQ--GSG-----------------------GKVDT-----------QTYNALI 290
AF CF++V+ GSG G +DT Y +L
Sbjct: 185 AFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLF 244
Query: 291 TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
F +G ++ +++ ME +D Y ++ K + +A +L+ M ER+
Sbjct: 245 YCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
IF++L+ K G LD ++ +M G++ + Y +I SY K G +D ALRL
Sbjct: 305 LDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Query: 411 W-DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHA 469
+ + N YT ++ K G +D A+ + M G +P TY LL+M
Sbjct: 365 FVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLP 424
Query: 470 ASGQVDSAMKLYNSMTNAG 488
++ AM + S+ + G
Sbjct: 425 KCHELKYAMVILQSILDNG 443
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 149/358 (41%), Gaps = 45/358 (12%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
+VP+ + YL++ + L + D DA ++ D M + + ++ Y+ +I L K ++
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVA---IYSSIIGSLGKQGRVV 599
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
A F K+ SG + D Y +I + G ++ E+ E + S TY ++I
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
K G ++ + +M E + P+ ++++L+ K G + ++ M ++
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 386 PSATMYASLIESYTKA--------------------------------------GKLDTA 407
Y +L+ +A G A
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFA 779
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEM 467
+ + ++KK+ PN L+ I+ +G+LD A + M+K G +P TY+ L++
Sbjct: 780 MEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Query: 468 HAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
H +G ++SA+ L+ TN P Y+ +L L K A ++LEM+ G +
Sbjct: 839 HIEAGDIESAIDLFEG-TNC--EPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGIN 893
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%)
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
E M C+ +Y +I L + ++ L ++E + P + +V+ + K
Sbjct: 501 EKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKK 560
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
D A I M GLRP+ +Y+S+I S K G++ A + +M ++G +P+ Y
Sbjct: 561 NDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAY 620
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
+++ + A++G++D A + ++ K P+ TY+ L+ G ++ + + M
Sbjct: 621 MIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE 680
Query: 487 AGLRPGMSTYTAIL 500
GL P + YTA++
Sbjct: 681 DGLSPNVVLYTALI 694
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 132/320 (41%), Gaps = 48/320 (15%)
Query: 228 AIQSLFDE-MVQDSSK--------DGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSG 278
I+ LF E +++D + D + D Y V+ L K + AF ++ G
Sbjct: 518 VIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELG 577
Query: 279 GKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAF 338
+ Y+++I +G ++ E + M + D Y +MI + A++GR+D A
Sbjct: 578 LRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEAN 637
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY 398
+L +E+ + +RPS ++ L+ K G ++ + +M GL P+ +Y +LI +
Sbjct: 638 ELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHF 697
Query: 399 TKAGKLDTALRLWDEMKKAGFRPNYGLYT-----------------LIVE---------- 431
K G + L+ M + + ++ Y +IVE
Sbjct: 698 LKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRL 757
Query: 432 -----------SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
S G AM + ++K+ +P ++ ++ + A+G++D A
Sbjct: 758 IRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNH 816
Query: 481 YNSMTNAGLRPGMSTYTAIL 500
SM G+ P + TYT ++
Sbjct: 817 LESMQKEGIVPNLVTYTILM 836
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 170/431 (39%), Gaps = 42/431 (9%)
Query: 226 FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGG-KVDTQ 284
D + +F +M++ + + + Y+ +I K ++ A F GS +
Sbjct: 323 LDKGRVMFSQMIKKGVQSNVFT---YHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVH 379
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
Y LI F KG K+ ++ M D TY +++ L K L A + Q +
Sbjct: 380 CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSI 439
Query: 345 KERN--IRP----SFGIFSSLVDSM-GKAGRLDT----------------------AMKI 375
+ I P G V+S+ G+ R D A+
Sbjct: 440 LDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSR 499
Query: 376 YMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
+M G P Y S+I+ + ++ L + +++ F P+ Y ++V K
Sbjct: 500 IEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCK 559
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
D A +I + ME+ G PT + YS ++ G+V A + + M +G++P
Sbjct: 560 KNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIA 619
Query: 496 YTAILTLLASKKLVDVAAKILLE-----MKAMGFSVDVSASDVLMVYIKDGSVDLALRWL 550
Y ++ A +D A +++ E ++ F+ V S ++K G ++ ++L
Sbjct: 620 YMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG----FVKMGMMEKGCQYL 675
Query: 551 RFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRC 610
M G+ N + L +K G ++ + L + K D + Y ++L+ L R
Sbjct: 676 DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Query: 611 QEEQNERHLML 621
+ +R +++
Sbjct: 736 MARKKKRQVIV 746
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 134/344 (38%), Gaps = 12/344 (3%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSL-DSSTYELMIPSLAKSGRLD 335
+G ++D+ Y ALI G P + Y + DSS + M+ L K R D
Sbjct: 89 NGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFD 148
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM--RGFGLRPSATMYAS 393
A + PS S +VD + R A + ++ RG GL
Sbjct: 149 EARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCC--KR 206
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRP-NYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
L + G L+ A+ + D + P LY + K G A ++F+ ME
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G+ Y+CL++ + + AM+LY M + ++ ++D
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 513 AKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSG---IRTNNFIIRQL 568
+ +M G +V +++ Y K+G+VD ALR F++++G I N L
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL--FVNNTGSEDISRNVHCYTNL 384
Query: 569 FESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQE 612
K G + A LL +++ D + Y +L L +C E
Sbjct: 385 IFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHE 428
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 134/345 (38%), Gaps = 9/345 (2%)
Query: 190 IDASLSLYKWAKRQSWYVPN-----EECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDG 244
ID S S+ + A + V N CY L L + ++ +++ V +
Sbjct: 70 IDGSSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVP 129
Query: 245 ISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE 304
SS + ++ L K + + A ++ SG + + ++ N+ ++F
Sbjct: 130 DSS--VLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFH 187
Query: 305 IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP-SFGIFSSLVDSM 363
+E ++ L + + L G L+ A + + P ++ SL
Sbjct: 188 CFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCF 247
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
K G A ++ M G MY L++ Y K + A+RL+ M + F +
Sbjct: 248 CKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLY-N 482
++ ++ K G LD +F+ M K G TY ++ + G VD A++L+ N
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVN 367
Query: 483 SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD 527
+ + + + YT ++ K +D A +L+ M G D
Sbjct: 368 NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPD 412
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR 380
+ +I +GRLD A+ + M++ I P+ ++ L+ S +AG +++A+ ++
Sbjct: 797 HNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF---E 853
Query: 381 GFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLD 440
G P MY++L++ + AL L EM+K+G PN Y +++ S
Sbjct: 854 GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTM 913
Query: 441 TAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
A+ + DM P ++ L+ + ++ A L+ M +G
Sbjct: 914 EAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 134/284 (47%), Gaps = 3/284 (1%)
Query: 239 DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGL 298
+S K S DAY+ + L KA+K + ++++G V T ++ F G
Sbjct: 112 ESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDK-LVTLNTVAKIMRRFAGAGE 170
Query: 299 PYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSS 358
++ I++ + ++ + L++ +L K R++ A + ++K +I P+ F+
Sbjct: 171 WEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNI 229
Query: 359 LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
+ KA R++ A+ EM+G G RP Y ++I Y + + + EM+ G
Sbjct: 230 FIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG 289
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAM 478
PN YT I+ S + + A+ + M+++G P Y+CL+ A +G+++ A
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 479 KLYN-SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+++ M G+ STY +++ + D A ++L EM++
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 3/282 (1%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+N I KA ++E A ++++G G + +Y +I + + K +E+ M
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
EA +S TY ++ SL + A ++ MK +P ++ L+ ++ +AGRL
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 370 DTAMKIY-MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF-RPNYGLYT 427
+ A +++ +EM G+ + + Y S+I Y + D A+ L EM+ + P+ Y
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLP-TPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
++ S K G + + +M L STY+ L++ + + A L+ M +
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV 528
+ P T +L + K + + A +I MK + + V
Sbjct: 466 QDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTAPV 507
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 134/331 (40%), Gaps = 41/331 (12%)
Query: 318 SSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM 377
S Y++ + L K+ + D + + M+ + + + ++ AG + A+ I+
Sbjct: 121 SDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFD 179
Query: 378 EMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG 437
+ FGL + L+++ K +++ A + ++K + PN + + + K+
Sbjct: 180 RLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKAN 238
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
+++ A+ +M+ GF P +Y+ ++ + + ++ + M G P TYT
Sbjct: 239 RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYT 298
Query: 498 AILTLLASKKLVDVAAKIL------------------------------------LEMKA 521
I++ L ++K + A ++ +EM
Sbjct: 299 TIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPE 358
Query: 522 MGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQ-LFESCMKNG-LY 578
+G S++ S + ++ +Y D A+ L+ M+SS + + Q L SC K G +
Sbjct: 359 LGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVV 418
Query: 579 ESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
E K L E +D YT ++ L R
Sbjct: 419 EVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y + +LN ++F+ + M + K S F YN +I LA+A +LE A
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPD-SLF--YNCLIHTLARAGRLEEA 348
Query: 268 FCCFK-KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ-CSLDSSTYELMI 325
F+ ++ G ++T TYN++I ++ + K+ E+ + ME++ C+ D TY+ ++
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Query: 326 PSLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
S K G + KL +EM + ++ ++ L+ + +A + A ++ EM +
Sbjct: 409 RSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 468
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMK 415
P L+E K ++A R+ MK
Sbjct: 469 TPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 134/284 (47%), Gaps = 3/284 (1%)
Query: 239 DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGL 298
+S K S DAY+ + L KA+K + ++++G V T ++ F G
Sbjct: 112 ESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDK-LVTLNTVAKIMRRFAGAGE 170
Query: 299 PYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSS 358
++ I++ + ++ + L++ +L K R++ A + ++K +I P+ F+
Sbjct: 171 WEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNI 229
Query: 359 LVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAG 418
+ KA R++ A+ EM+G G RP Y ++I Y + + + EM+ G
Sbjct: 230 FIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG 289
Query: 419 FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAM 478
PN YT I+ S + + A+ + M+++G P Y+CL+ A +G+++ A
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 479 KLYN-SMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+++ M G+ STY +++ + D A ++L EM++
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 3/282 (1%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
+N I KA ++E A ++++G G + +Y +I + + K +E+ M
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
EA +S TY ++ SL + A ++ MK +P ++ L+ ++ +AGRL
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 370 DTAMKIY-MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF-RPNYGLYT 427
+ A +++ +EM G+ + + Y S+I Y + D A+ L EM+ + P+ Y
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLP-TPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
++ S K G + + +M L STY+ L++ + + A L+ M +
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV 528
+ P T +L + K + + A +I MK + + V
Sbjct: 466 QDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTAPV 507
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 134/331 (40%), Gaps = 41/331 (12%)
Query: 318 SSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM 377
S Y++ + L K+ + D + + M+ + + + ++ AG + A+ I+
Sbjct: 121 SDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFD 179
Query: 378 EMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG 437
+ FGL + L+++ K +++ A + ++K + PN + + + K+
Sbjct: 180 RLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKAN 238
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
+++ A+ +M+ GF P +Y+ ++ + + ++ + M G P TYT
Sbjct: 239 RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYT 298
Query: 498 AILTLLASKKLVDVAAKIL------------------------------------LEMKA 521
I++ L ++K + A ++ +EM
Sbjct: 299 TIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPE 358
Query: 522 MGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQ-LFESCMKNG-LY 578
+G S++ S + ++ +Y D A+ L+ M+SS + + Q L SC K G +
Sbjct: 359 LGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVV 418
Query: 579 ESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
E K L E +D YT ++ L R
Sbjct: 419 EVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
PN Y + +LN ++F+ + M + K S F YN +I LA+A +LE A
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPD-SLF--YNCLIHTLARAGRLEEA 348
Query: 268 FCCFK-KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ-CSLDSSTYELMI 325
F+ ++ G ++T TYN++I ++ + K+ E+ + ME++ C+ D TY+ ++
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Query: 326 PSLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
S K G + KL +EM + ++ ++ L+ + +A + A ++ EM +
Sbjct: 409 RSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 468
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMK 415
P L+E K ++A R+ MK
Sbjct: 469 TPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 176/384 (45%), Gaps = 43/384 (11%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT-----LFLNK-------- 296
YN +I+ + ++ A+ ++++ +G + D TYN+LI+ L LN+
Sbjct: 50 TYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM 109
Query: 297 ----------------------GLPYKSFEI-YESMEAAQCSLDSSTYELMIPSLAKSGR 333
G ++F+I +E + A TY +++ +L KSG
Sbjct: 110 LHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGH 169
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
D A +LF+ +K R ++P ++ L++ + K+ R+ + + E++ G P+A Y +
Sbjct: 170 TDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTT 228
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+++ Y K +++ L+L+ +MKK G+ + +V + K+G+ + A +++ ++G
Sbjct: 229 MLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Query: 454 FLPTP-STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
+Y+ LL ++ G +D+ L + GL+P T+T I+ L + A
Sbjct: 289 TRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGA 348
Query: 513 AKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES 571
K L + MG V + L+ + K G VD A+R M+ +R + F + +
Sbjct: 349 EKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME---VR-DEFTYTSVVHN 404
Query: 572 CMKNGLYESAKPLLETYVNSAAKV 595
K+G A LL + N K+
Sbjct: 405 LCKDGRLVCASKLLLSCYNKGMKI 428
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 4/283 (1%)
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
+ SL K L+ A L + + P +++L+ + +D A + MR G+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
P T Y SLI K L+ L+L+DEM +G P+ Y ++ K G+ A
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 445 IFN-DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
I + D+ AG +P TY+ LL+ SG D+A++L+ + + ++P + TY ++ L
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGL 198
Query: 504 ASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNN 562
+ V ++ E+K G++ + V+ + +L +Y K ++ L+ M G +
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 563 FIIRQLFESCMKNGLYESAKPLLETYVNSAAKV-DLVLYTSIL 604
F + + +K G E A + V S + D+V Y ++L
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL 301
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 12/324 (3%)
Query: 245 ISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE 304
+ D YN ++ L K+ + A FK ++ S K + TYN LI L K S +
Sbjct: 151 VPGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILIN-GLCKSRRVGSVD 208
Query: 305 -IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS--SLVD 361
+ ++ + + ++ TY M+ K+ R++ +LF +MK+ +F F+ ++V
Sbjct: 209 WMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY--TFDGFANCAVVS 266
Query: 362 SMGKAGRLDTAMKIYMEMRGFGLRPSATM-YASLIESYTKAGKLDTALRLWDEMKKAGFR 420
++ K GR + A + E+ G R + Y +L+ Y K G LD L +E++ G +
Sbjct: 267 ALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLK 326
Query: 421 PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
P+ +T+IV G A + + G P+ T +CL++ +G VD AM+L
Sbjct: 327 PDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Query: 481 YNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKD 540
+ SM +R TYT+++ L + A+K+LL G + SA ++ I++
Sbjct: 387 FASME---VRDEF-TYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRE 442
Query: 541 GSVDLALRWLRFMDSSGIRTNNFI 564
A R + I N +
Sbjct: 443 TVSYQAARKTHIKIKAAIECNTLM 466
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 137/316 (43%), Gaps = 9/316 (2%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
VP + Y +L DAL +S D LF + + ++ YN +I L K+ ++
Sbjct: 151 VPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMT----YNILINGLCKSRRVGS 206
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
++++ SG + TY ++ ++ K +++ M+ + D ++
Sbjct: 207 VDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVS 266
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGI-FSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+L K+GR + A++ E+ R + +++L++ K G LD + E+ GL+
Sbjct: 267 ALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLK 326
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P + ++ G A + + + G +P+ +++ K+G +D AM +
Sbjct: 327 PDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
F ME + TY+ ++ G++ A KL S N G++ S A+L+ +
Sbjct: 387 FASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRE 442
Query: 506 KKLVDVAAKILLEMKA 521
A K +++KA
Sbjct: 443 TVSYQAARKTHIKIKA 458
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 162/355 (45%), Gaps = 30/355 (8%)
Query: 144 NVTAVAKIVEVVKRWKWGPELETHLDKLQFLPNMTHILQALKIVND----IDASLSLYKW 199
NVT+ A +V ++ E+ + K+ L ++++ V D +D ++ K
Sbjct: 59 NVTSYASLVTLL----CSQEIPYEVPKITIL-----MIKSCNSVRDALFVVDFCRTMRKG 109
Query: 200 AKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD----AYNRVI 255
+ Y +CY L +L + + ++ L+ EM++D I +F+ Y + +
Sbjct: 110 DSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK-L 168
Query: 256 QYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCS 315
Y+ +A++ + +G D TY + IT + +F++++ M C
Sbjct: 169 GYVVEAKQY------VTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCH 222
Query: 316 LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI 375
+ +Y +I L ++ ++D A L +MK+ N P+ ++ L+D++ +G+ AM +
Sbjct: 223 RNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNL 282
Query: 376 YMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
+ +M G++P MY LI+S+ LD A L + M + G PN Y +++ K
Sbjct: 283 FKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ AM + + M + +P TY+ L+ +GQ S + L + N LR
Sbjct: 343 KN-VHKAMGLLSKMLEQNLVPDLITYNTLI-----AGQCSSGISLSEKICNGLLR 391
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 39/288 (13%)
Query: 280 KVDTQTYNALITLFLNKGLPYK--------------------------------SFEIYE 307
K + +Y +L+TL ++ +PY+ SFEI
Sbjct: 57 KHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEI-- 114
Query: 308 SMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
+ L Y ++ SLA+ G ++ +L+ EM E + P F++LV+ K G
Sbjct: 115 -----KYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLG 169
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
+ A + + G P Y S I + + ++D A +++ EM + G N YT
Sbjct: 170 YVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
++ ++ K+D A+S+ M+ P TY+ L++ SGQ AM L+ M+ +
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
G++P YT ++ S +D A+ +L M G +V + L+
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALI 337
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 1/256 (0%)
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
K+ + YN L++ GL + +Y M S D T+ ++ K G + A +
Sbjct: 117 KLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQ 176
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
+ + P + ++S + + +D A K++ EM G + Y LI
Sbjct: 177 YVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF 236
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
+A K+D AL L +MK PN YT+++++ SG+ AM++F M ++G P
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
Y+ L++ + +D A L M GL P + TY A++ KK V A +L +M
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKM 355
Query: 520 KAMGFSVDVSASDVLM 535
D+ + L+
Sbjct: 356 LEQNLVPDLITYNTLI 371
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 3/229 (1%)
Query: 382 FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDT 441
+ L P Y +L+ S + G ++ RL+ EM + P+ + +V K G +
Sbjct: 116 YKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVE 173
Query: 442 AMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
A + +AG P TY+ + H +VD+A K++ MT G +YT ++
Sbjct: 174 AKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIY 233
Query: 502 LLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRT 560
L K +D A +L++MK +V VL+ G A+ + M SGI+
Sbjct: 234 GLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP 293
Query: 561 NNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
++ + L +S + A LLE + + +++ Y +++ +
Sbjct: 294 DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 151/321 (47%), Gaps = 25/321 (7%)
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVI 255
+YK S + PN + +F A QS D + +M+++ + +S N VI
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS---LCNAVI 276
Query: 256 QYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCS 315
+ AK L+ A F ++ + D+ TY A+I+ ++ GL ++ ++ ME S
Sbjct: 277 GFYAKCGSLDYARALFDEMS----EKDSVTYGAIISGYMAHGLVKEAMALFSEME----S 328
Query: 316 LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI 375
+ ST+ MI L ++ + F+EM RP+ SSL+ S+ + L +I
Sbjct: 329 IGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI 388
Query: 376 YMEMRGFGLRPSAT----MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
+ F +R A + S+I++Y K G L A R++D K +T I+
Sbjct: 389 H----AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIA----WTAIIT 440
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM-TNAGLR 490
+ A G D+A S+F+ M+ G P T + +L A SG D A +++SM T +
Sbjct: 441 AYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIE 500
Query: 491 PGMSTYTAILTLLA-SKKLVD 510
PG+ Y ++++L+ + KL D
Sbjct: 501 PGVEHYACMVSVLSRAGKLSD 521
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
MI K ++ A K+F EM ER++ ++S++ ++G + K+Y M
Sbjct: 173 MITYYTKCDNIESARKVFDEMSERDVVS----WNSMISGYSQSGSFEDCKKMYKAMLACS 228
Query: 384 -LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
+P+ S+ ++ ++ L L + +M + + + L ++ AK G LD A
Sbjct: 229 DFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYA 288
Query: 443 MSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTL 502
++F++M + TY ++ + A G V AM L++ M + GL ST+ A+++
Sbjct: 289 RALFDEMSE----KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL----STWNAMISG 340
Query: 503 L 503
L
Sbjct: 341 L 341
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
+ A+IT + G + +++ M+ D T ++ + A SG D+A +F M
Sbjct: 434 AWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSM 493
Query: 345 KER-NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
+ +I P ++ +V + +AG+L AM+ +M + P A ++ +L+ + G
Sbjct: 494 LTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP---IDPIAKVWGALLNGASVLGD 550
Query: 404 LDTALRLWDEMKKAGFRP-NYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
L+ A D + + P N G YT++ ++G+ + A + N M++ G P T
Sbjct: 551 LEIARFACDRLFE--MEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGT 606
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 126/244 (51%), Gaps = 12/244 (4%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEA-AQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
D ++N +I+ + G ++ E+Y ME + + + T+ ++P+ +++G L KL
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
+ + + + +SL D GK GRL+ A+ ++ ++ R ++ + +LI +
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP----RVNSVPWNTLIACHGF 529
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA-GFLPTPS 459
G + A+ L+ EM G +P++ + ++ + + SG +D F M+ G P+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD---VAAKIL 516
Y C+++M+ +GQ+++A+K SM+ L+P S + A+L+ VD +A++ L
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMS---LQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 517 LEMK 520
E++
Sbjct: 647 FEVE 650
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 167/389 (42%), Gaps = 16/389 (4%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDG-ISSFDA--YNRVIQYLAKAEKLELAFCCF 271
+L + L +SR D +F++M + DG + D+ +N +I L K +L+ A
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 272 KKVQGSGGKV-DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
+++ V + TYN LI + G + E+ M+ + + T ++ + +
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
L++A F +M++ ++ + + +L+ + ++ AM Y +M G P A +
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
Y +LI + + A+R+ +++K+ GF + Y +++ + + DME
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
K G P TY+ L+ +S ++ M GL P ++TY A++ S +D
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 511 VAAKILLEMKAMGFSVDVSASDVLM-----VYIKDGSVDLALRWLRFMDSSGIRTN---- 561
A K+ K MG V+ + V+ + K G+ AL M +R N
Sbjct: 634 EALKLF---KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 562 NFIIRQLFESCMKNGLYESAKPLLETYVN 590
N + + L E L + ++E VN
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEHLVN 719
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 43/328 (13%)
Query: 302 SFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVD 361
+++I + + L++ + ++ L ++ + L +M E IRP L++
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 362 SMGKAGRLDTAMKIYMEMRGF--------------------GL----------------- 384
++ K+ R+D A++++ +MRG GL
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 385 -----RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
P+A Y LI+ Y +AGKL+TA + MK+ +PN IV + L
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
+ A+ F DMEK G TY L+ + V+ AM Y M AG P Y A+
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGI 558
++ L + A +++ ++K GFS+D+ A ++L+ ++ + + L M+ G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 559 RTNNFIIRQLFESCMKNGLYESAKPLLE 586
+ ++ L K+ +ES + ++E
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMME 605
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 169/400 (42%), Gaps = 5/400 (1%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
L D L Q R+ + + +V S+D ++ ++ Y AKA + + F++++
Sbjct: 102 LLDKLAQ-RELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIR 160
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
G K Q L+ + + L ++I++ M + Y +++ + +KSG +
Sbjct: 161 SCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPE 220
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
A KL EM+E+ + P +++L+ K A+ + M G+ P+ Y S I
Sbjct: 221 KAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFI 280
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
+++ G++ A RL+ E+K N+ YT +++ + +D A+ + ME GF
Sbjct: 281 HGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFS 339
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
P TY+ +L G++ A +L M+ + P T ++ + + A K+
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 516 LLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMK 574
+M G +D+ + L+ + K ++ A L M G L +
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYN 459
Query: 575 NGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQ 614
+ LLE + D+ LY ++ + C+ EQ
Sbjct: 460 QNKQDEITKLLEEFEKRGLCADVALYRGLIRRI--CKLEQ 497
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 149/320 (46%), Gaps = 38/320 (11%)
Query: 281 VDTQTYNALITLFLNKGLPYKSFEIY---ESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
+ TQ + L +LF G P S+ + +S+ +++ SL SS ++I L K A
Sbjct: 43 ITTQVISEL-SLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMILI--LTKHKHFKTA 99
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSM------------------GKAGRLDTAMKIYMEM 379
+L ++ +R + S + SLV + KAG ++ ++ ++ ++
Sbjct: 100 HQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQI 159
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
R GL+P L+ S K DT +++ +M K G N +Y ++V + +KSG
Sbjct: 160 RSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDP 219
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
+ A + ++ME+ G P TY+ L+ ++ A+ + + M +G+ P + TY +
Sbjct: 220 EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSF 279
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDG-----SVDLALRWLRFMD 554
+ + + + A ++ E+K DV+A+ V + DG +D ALR M+
Sbjct: 280 IHGFSREGRMREATRLFREIKD-----DVTANHVTYTTLIDGYCRMNDIDEALRLREVME 334
Query: 555 SS----GIRTNNFIIRQLFE 570
S G+ T N I+R+L E
Sbjct: 335 SRGFSPGVVTYNSILRKLCE 354
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 152/354 (42%), Gaps = 37/354 (10%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P+ + +L ++L + R D + +F +MV+ +++ YN ++ +K+ E A
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGV---VANIHVYNVLVHACSKSGDPEKA 222
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+++ G D TYN LI+++ K + +++ + + ME + + + TY I
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG 282
Query: 328 LAKSGRLDVAFKLFQEMKE----------------------------------RNIRPSF 353
++ GR+ A +LF+E+K+ R P
Sbjct: 283 FSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGV 342
Query: 354 GIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDE 413
++S++ + + GR+ A ++ EM G + P +LI +Y K + +A+++ +
Sbjct: 343 VTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK 402
Query: 414 MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQ 473
M ++G + + Y ++ K +L+ A M + GF P +TYS L++ +
Sbjct: 403 MIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNK 462
Query: 474 VDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD 527
D KL GL ++ Y ++ + + VD A + M+ G D
Sbjct: 463 QDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGD 516
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 4/268 (1%)
Query: 232 LFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT 291
LF E+ D + + ++ Y +I + ++ A + ++ G TYN+++
Sbjct: 295 LFREIKDDVTANHVT----YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Query: 292 LFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP 351
G ++ + M + D+ T +I + K + A K+ ++M E ++
Sbjct: 351 KLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
+ +L+ K L+ A + M G P Y+ L++ + K D +L
Sbjct: 411 DMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLL 470
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
+E +K G + LY ++ K ++D A +F MEK G + ++ + + +
Sbjct: 471 EEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRT 530
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
G+V A L++ M N L + Y +I
Sbjct: 531 GKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 107/267 (40%), Gaps = 3/267 (1%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
N Y L D + D D L + M G+ + YN +++ L + ++ A
Sbjct: 305 ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT---YNSILRKLCEDGRIREA 361
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
++ G + D T N LI + + ++ + M + LD +Y+ +I
Sbjct: 362 NRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG 421
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
K L+ A + M E+ P + +S LVD + D K+ E GL
Sbjct: 422 FCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD 481
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+Y LI K ++D A L++ M+K G + ++T + + ++GK+ A ++F+
Sbjct: 482 VALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFD 541
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQV 474
M + Y + +A V
Sbjct: 542 VMYNRRLMVNLKLYKSISASYAGDNDV 568
>AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5117489-5119060 REVERSE
Length = 523
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 166/381 (43%), Gaps = 46/381 (12%)
Query: 183 ALKIVN----DIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQ 238
L++VN D + L + +QS ++ + Y + D L + R F+ +FDEM
Sbjct: 112 VLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEM-- 169
Query: 239 DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALI-------- 290
S +DG + Y ++ A A K++ A F++ + G D ++ L+
Sbjct: 170 -SKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKH 228
Query: 291 -----TLFLNK---------------------GLPYKSFEIYESMEAAQCSLDSSTYELM 324
TLF ++ G +++ ++ + A++C D +Y M
Sbjct: 229 VEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTM 288
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
I +L K G+L A +L++ M + P I ++++D++ R+ A++++ E+ G
Sbjct: 289 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGP 348
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAG--FRPNYGLYTLIVESNAKSGKLDTA 442
P+ Y SL++ K + + L +EM+ G PN ++ +++ + +S +D
Sbjct: 349 DPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI- 407
Query: 443 MSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTL 502
+ M K T Y+ + ++ + + ++++ M +GL P TYT +
Sbjct: 408 --VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHG 465
Query: 503 LASKKLVDVAAKILLEMKAMG 523
L +K + A EM + G
Sbjct: 466 LHTKGKIGEALSYFQEMMSKG 486
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 120/267 (44%), Gaps = 8/267 (2%)
Query: 286 YNALITLFLNKGLPYKSF-EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
YN ++ + L K ++ F ++++ M ++ TYE+++ A + ++D A +F+
Sbjct: 146 YNEILDV-LGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM-EMRGFGLRPSATMYASLIESYTKAGK 403
KE I F L+ + + ++ A ++ R FG A ++ + G
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM--NMILNGWCVLGN 262
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
+ A R W ++ + RP+ Y ++ + K GKL AM ++ M P +
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
+++ ++ A++++ ++ G P + TY ++L L + + +++ EM+ G
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 524 FSV---DVSASDVLMVYIKDGSVDLAL 547
S DV+ S +L + VD+ L
Sbjct: 383 GSCSPNDVTFSYLLKYSQRSKDVDIVL 409
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 125/301 (41%), Gaps = 6/301 (1%)
Query: 215 LLFDALNQSR-DFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKK 273
L+ + +N++R D+ L +V+ S +SS YN ++ L K + E F +
Sbjct: 111 LVLEVVNRNRSDWKPAYILSQLVVKQSVH--LSSSMLYNEILDVLGKMRRFEEFHQVFDE 168
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
+ G V+ +TY L+ + ++ ++E + D + ++ L +
Sbjct: 169 MSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKH 228
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
++ A LF + R + +++ G + A + + ++ RP Y +
Sbjct: 229 VEFAETLFCS-RRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGT 287
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+I + TK GKL A+ L+ M P+ + ++++ ++ A+ +F ++ + G
Sbjct: 288 MINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKG 347
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG--LRPGMSTYTAILTLLASKKLVDV 511
P TY+ LL+ + + +L M G P T++ +L K VD+
Sbjct: 348 PDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI 407
Query: 512 A 512
Sbjct: 408 V 408
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 173/377 (45%), Gaps = 54/377 (14%)
Query: 176 NMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDE 235
+T +L+A ++ DID S++ ++ R+ + + + L D ++ D D+ +FDE
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDE 287
Query: 236 MVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITL--F 293
+ ++ +S +N ++ ++ + A F + +VD T +L+ + F
Sbjct: 288 T---TCRNIVS----WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKF 340
Query: 294 LNKGLPYKSFE------IYESMEAA---------QCS--------LDSSTYE------LM 324
+ LP KS YES E A CS LDS TY+ M
Sbjct: 341 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 400
Query: 325 IPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
I LA +GR D A +F M++ P+ SL+++ + L T+ + G +
Sbjct: 401 ISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAH----GIAI 453
Query: 385 RPS-----ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
R S ++ S++++Y K G ++ A R +D++ + N +T+I+ + A +G
Sbjct: 454 RRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITE----KNIISWTVIISAYAINGLP 509
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
D A+++F++M++ G+ P TY L G V + ++ SM +P + Y+ I
Sbjct: 510 DKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCI 569
Query: 500 LTLLASKKLVDVAAKIL 516
+ +L+ +D A +++
Sbjct: 570 VDMLSRAGEIDTAVELI 586
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 161/392 (41%), Gaps = 8/392 (2%)
Query: 192 ASLSLYKWAKRQSWYVPNE--ECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD 249
+ L KW Q Y E E + D + +S D + SL + + Q S D
Sbjct: 64 SHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKS-SLDRLASLRESVCQTKSFDYDDCLS 122
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
++ +++ L KL+ A KK+ SG T+N L+ G K+ + M
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
S + +Y +I L +D A LF M + IRP+ + +V ++ + G +
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 370 DTAMKIYMEMRGFGLRPSA----TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL 425
K +E + +A + L++S K G + AL +W EM + + +
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
Y +I+ SG + A DM K G P TY+ L+ G+ D A L+ +M
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 486 NAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVD 544
N G+ P +Y I+ L V+ A + LL M +V +V++ Y + G
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 545 LALRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
AL L M S G++ N + L +K G
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 145/348 (41%)
Query: 180 ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQD 239
+++ L VN++D +L L+ + C +++ + + + L +E++
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
S + ++ K + A +K++ D+ YN +I + G
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
++ M + D TY +I +L K G+ D A L M+ + P + +
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 360 VDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
+ + G ++ A + + M L P ++ +I+ Y + G +AL + + M G
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMK 479
+PN ++ K G+L A + N+M P +TY+ LL G + A +
Sbjct: 437 KPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQ 496
Query: 480 LYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD 527
LY+ M G +P + TYT ++ L K + A +L ++A G ++D
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITID 544
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 128/294 (43%), Gaps = 9/294 (3%)
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG--RLDTAMKIYMEMRGFG 383
PS++ + K F + K+ + + +++D + K+ RL + + + + F
Sbjct: 57 PSISGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFD 116
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
++++S++ GKLD AL L +M +G P + ++ K+G ++ A
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD 176
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
+ +M + G P +Y+ L++ + VD A+ L+N+M G+RP T I+ L
Sbjct: 177 GLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHAL 236
Query: 504 ASKKLVDVAAKILLE----MKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGI 558
K ++ K LLE +D+ +LM K+G+V AL + M +
Sbjct: 237 CQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNV 296
Query: 559 RTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQE 612
++ + + +G +A + V D+ Y ++++ L C+E
Sbjct: 297 PADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL--CKE 348
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G K + T NALI ++ G ++ + M + + D++TY L++ + G L +A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
F+L+ EM R +P ++ LV + GRL A + ++ G+ + L +
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKK 554
Query: 398 YTK 400
YT+
Sbjct: 555 YTR 557
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 172/402 (42%), Gaps = 12/402 (2%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDG-ISSFDA--YNRVIQYLAKAEKLELAFCCF 271
+L + L +SR D +F++M + DG + D+ +N +I L K +L+ A
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 272 KKVQGSGGKV-DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
+++ V + TYN LI + G + E+ M+ + + T ++ + +
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
L++A F +M++ ++ + + +L+ + ++ AM Y +M G P A +
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
Y +LI + + A+R+ +++K+ GF + Y +++ + + DME
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
K G P TY+ L+ +S ++ M GL P ++TY A++ S +D
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 511 VAAKILLEMKAMGFSVDVSASDVLM-----VYIKDGSVDLALRWLRFMDSSGIRTNNFII 565
A K+ K MG V+ + V+ + K G+ AL M +R N
Sbjct: 634 EALKLF---KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 566 RQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
LF+ + E+ L++ V + + + + ++ L
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 43/328 (13%)
Query: 302 SFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVD 361
+++I + + L++ + ++ L ++ + L +M E IRP L++
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 362 SMGKAGRLDTAMKIYMEMRGF--------------------GL----------------- 384
++ K+ R+D A++++ +MRG GL
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 385 -----RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
P+A Y LI+ Y +AGKL+TA + MK+ +PN IV + L
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
+ A+ F DMEK G TY L+ + V+ AM Y M AG P Y A+
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGI 558
++ L + A +++ ++K GFS+D+ A ++L+ ++ + + L M+ G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 559 RTNNFIIRQLFESCMKNGLYESAKPLLE 586
+ ++ L K+ +ES + ++E
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMME 605
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 163/388 (42%), Gaps = 48/388 (12%)
Query: 172 QFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQS 231
Q L + IL+ L+ +D +A + + W + V N Y L+ L + ++D +
Sbjct: 137 QSLEHCNGILKRLESCSDTNA-IKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAED 195
Query: 232 LFDEMVQDSSKDGISSFDAYNRVIQYLAK------------------------------- 260
L E+ + S+ +N VI K
Sbjct: 196 LIKELC--GFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMG 253
Query: 261 -------AEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
E+ E AF +K G V Y+++IT++ L K+ E+ + M+ +
Sbjct: 254 LYQKNWNVEEAEFAFSHMRKF----GIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDR 309
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
L + +M+ + ++ G++++A + M+ P+ +++L+ GK +++ A
Sbjct: 310 VRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQ 369
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN-YGLYTLIVES 432
++ + GL P T Y S+IE + +A + A + E+K+ G++PN + L+TLI
Sbjct: 370 GLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI-NL 428
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
AK G D A+ DM G S +L+ + G++D + + +R
Sbjct: 429 QAKYGDRDGAIKTIEDMTGIG-CQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLN 487
Query: 493 MSTYTAILTLLASKKLVDVAAKILLEMK 520
+++++++ +VD +L E K
Sbjct: 488 QTSFSSLVMAYVKHGMVDDCLGLLREKK 515
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 160/388 (41%), Gaps = 38/388 (9%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
++Q K K+++ C K + +++ ++++L+ ++ G+ + +
Sbjct: 459 ILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRD 518
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
+ +S Y L+I S +SG+L A K++ E + + I S+++D G A
Sbjct: 519 SAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAE 578
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA---LRLWDEMK--------------- 415
K+Y+ ++ G+ ++ ++ Y KAG L+ A L + DE K
Sbjct: 579 KLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRI 638
Query: 416 ------------------KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
K+G N +Y ++ A++ LD F +M + GF P
Sbjct: 639 YQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPN 698
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
T++ LL+++ + +L+ G+ +S T I +K ++++ I
Sbjct: 699 TVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAI-K 757
Query: 518 EMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
M+ GFSV + A + L+ Y KD ++ L+ M S +++ + + G
Sbjct: 758 NMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 817
Query: 577 LYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ +L+ S DL Y +++
Sbjct: 818 WIDEVADVLKELKESGLGPDLCSYNTLI 845
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
+ PN + +L D +++ F + LF + + G+ +YN +I K +
Sbjct: 695 FTPNTVTFNVLLDVYGKAKLFKKVNELF----LLAKRHGVVDVISYNTIIAAYGKNKDYT 750
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
K +Q G V + YN L+ + K I + M+ + D TY +MI
Sbjct: 751 NMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+ G +D + +E+KE + P +++L+ + G G ++ A+ + EMRG +
Sbjct: 811 NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Query: 386 PSATMYASLIESYTKAGKLDTALR--LWDEMKKAG 418
P Y +L+ + + + A++ LW MK+ G
Sbjct: 871 PDKVTYTNLVTALRRNDEFLEAIKWSLW--MKQMG 903
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 131/312 (41%), Gaps = 5/312 (1%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV--DTQTYNALITLFLNKGLPYKSFEIYE 307
++ V++ KA LE A C ++ + D + ++ ++ L K +Y
Sbjct: 595 GFSIVVRMYVKAGSLEEA-CSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYY 653
Query: 308 SMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
+ + + Y +I A++ LD F+EM P+ F+ L+D GKA
Sbjct: 654 RIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAK 713
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
++++ + G+ Y ++I +Y K M+ GF + Y
Sbjct: 714 LFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYN 772
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
++++ K +++ SI M+K+ P TY+ ++ ++ G +D + + +
Sbjct: 773 TLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKES 832
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLA 546
GL P + +Y ++ +V+ A ++ EM+ D V+ ++++ ++ A
Sbjct: 833 GLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Query: 547 LRWLRFMDSSGI 558
++W +M GI
Sbjct: 893 IKWSLWMKQMGI 904
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 126/292 (43%), Gaps = 38/292 (13%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKE-RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
Y L++ L + D A L +E+ + S+ +F++++ + K G + A K + M
Sbjct: 177 YSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMM 236
Query: 380 RGFGLRPSA----------------------------------TMYASLIESYTKAGKLD 405
FG+RP+ + Y+S+I YT+ D
Sbjct: 237 LEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYD 296
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A + D MK+ R + +++ + ++ GK++ A SI ME AGF P Y+ L+
Sbjct: 297 KAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLI 356
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
+ ++++A L++ + N GL P ++Y +++ + A E+K G+
Sbjct: 357 TGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYK 416
Query: 526 VD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNF--IIRQLFESCMK 574
+ + ++ + K G D A++ + M G + ++ II Q +E K
Sbjct: 417 PNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGK 468
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 122/288 (42%), Gaps = 3/288 (1%)
Query: 237 VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNK 296
+ D KD + + +++ K + + + +++ SG + + YN +I +
Sbjct: 618 IMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINC-CAR 676
Query: 297 GLPYKSFE-IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI 355
LP +E M + ++ T+ +++ K+ +LF K +
Sbjct: 677 ALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVIS- 735
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
+++++ + GK M+ G S Y +L+++Y K +++ + MK
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
K+ P++ Y +++ + G +D + +++++G P +Y+ L++ + G V+
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVE 855
Query: 476 SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
A+ L M + P TYT ++T L A K L MK MG
Sbjct: 856 EAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 90/190 (47%), Gaps = 7/190 (3%)
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRV 254
L+ AKR V + Y + A +++D+ + S M DG S S +AYN +
Sbjct: 721 LFLLAKRHG--VVDVISYNTIIAAYGKNKDYTNMSSAIKNM----QFDGFSVSLEAYNTL 774
Query: 255 IQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQC 314
+ K +++E K+++ S D TYN +I ++ +G + ++ + ++ +
Sbjct: 775 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Query: 315 SLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMK 374
D +Y +I + G ++ A L +EM+ RNI P +++LV ++ + A+K
Sbjct: 835 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
Query: 375 IYMEMRGFGL 384
+ M+ G+
Sbjct: 895 WSLWMKQMGI 904
>AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4013166-4014630 REVERSE
Length = 367
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 123/245 (50%), Gaps = 13/245 (5%)
Query: 179 HILQALKIVNDIDASLSLYKWAKRQSWYVPNEE-----CYLLLFDALNQSRDFDAIQSLF 233
++L A +ND+ S ++ R+ +P +E CYL L A + D + SL
Sbjct: 110 NLLAAAGELNDMKLSCRVF----REVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLL 165
Query: 234 DEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
E+ + S NR+I A+ +++ K+++ K D TYN+++ +
Sbjct: 166 KEISESSLP---YRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDIL 222
Query: 294 LNKGLPYKSFEIYESM-EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
GL + + +M E S++ TY ++ + K+ R D+ ++ EM + I P
Sbjct: 223 GRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPD 282
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
+++++DS+G++G + +++++ EM+ +RPS +Y +LI+ K+G +AL+L D
Sbjct: 283 LLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSD 342
Query: 413 EMKKA 417
E+K
Sbjct: 343 ELKNT 347
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 89/165 (53%), Gaps = 1/165 (0%)
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR-GF 382
+I + A++ ++D + +EMKE +P ++S++D +G+AG ++ + + M+
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDC 242
Query: 383 GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
+ + Y +++ KA + D L +++EM + G P+ YT +++S +SG + +
Sbjct: 243 SVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKES 302
Query: 443 MSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
+ +F++M++ P+ Y L++ SG SA++L + + N
Sbjct: 303 LRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNT 347
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER-NIRPSFGIFSSL 359
K I + M+ +C D TY ++ L ++G ++ + MKE ++ + ++++
Sbjct: 195 KVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTV 254
Query: 360 VDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
++ M KA R D + IY EM G+ P Y ++I+S ++G + +LRL+DEMK+
Sbjct: 255 LNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQI 314
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
RP+ +Y +++ KSG +A+ + ++++ L
Sbjct: 315 RPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSSL 350
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 127/277 (45%), Gaps = 4/277 (1%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR 380
Y ++ + G L A+ L Q ++E+NI +F +L+ + G+ + + +++ E+
Sbjct: 73 YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVL 132
Query: 381 GF-GLRP-SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
G P S+ Y +L ++ L E+ ++ + I+ + A++ +
Sbjct: 133 ILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQ 192
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT-NAGLRPGMSTYT 497
+D + I +M++ P TY+ +L++ +G V+ + + ++M + + + TY
Sbjct: 193 IDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYN 252
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSS 556
+L + D+ I EM G D+ S + V+ + G+V +LR M
Sbjct: 253 TVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQR 312
Query: 557 GIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAA 593
IR + ++ R L + K+G ++SA L + N+++
Sbjct: 313 QIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSS 349
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 43/328 (13%)
Query: 302 SFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVD 361
+++I + + L++ + ++ L ++ + L +M E IRP L++
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 362 SMGKAGRLDTAMKIYMEMRGF--------------------GL----------------- 384
++ K+ R+D A++++ +MRG GL
Sbjct: 338 TLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 385 -----RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
P+A Y LI+ Y +AGKL+TA + MK+ +PN IV + L
Sbjct: 398 LEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
+ A+ F DMEK G TY L+ + V+ AM Y M AG P Y A+
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGI 558
++ L + A +++ ++K GFS+D+ A ++L+ ++ + + L M+ G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577
Query: 559 RTNNFIIRQLFESCMKNGLYESAKPLLE 586
+ ++ L K+ +ES + ++E
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMME 605
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 171/402 (42%), Gaps = 12/402 (2%)
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDG-ISSFDA--YNRVIQYLAKAEKLELAFCCF 271
+L + L +SR D +F++M + DG + D+ +N +I L K +L+ A
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 272 KKVQ-GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
+++ + TYN LI + G + E+ M+ + + T ++ + +
Sbjct: 394 VRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
L++A F +M++ ++ + + +L+ + ++ AM Y +M G P A +
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
Y +LI + + A+R+ +++K+ GF + Y +++ + + DME
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
K G P TY+ L+ +S ++ M GL P ++TY A++ S +D
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 511 VAAKILLEMKAMGFSVDVSASDVLM-----VYIKDGSVDLALRWLRFMDSSGIRTNNFII 565
A K+ K MG V+ + V+ + K G+ AL M +R N
Sbjct: 634 EALKLF---KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 566 RQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
LF+ + E+ L++ V + + + + ++ L
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 130/267 (48%), Gaps = 12/267 (4%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
++ AK +L+ AF F++ K +N LI + + + ++ SM
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER- 225
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
+S ++ +I SG L+ A +LF+ M E+N+ +++L++ + G +TA+
Sbjct: 226 ---NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS----WTTLINGFSQTGDYETAI 278
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
Y EM GL+P+ A+++ + +K+G L + +R+ + G + + + T +V+
Sbjct: 279 STYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMY 338
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
AK G+LD A ++F++M L +++ +++ A G+ A++ + M +G +P
Sbjct: 339 AKCGELDCAATVFSNMNHKDIL----SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDE 394
Query: 494 STYTAILTLLASKKLVDVAAKILLEMK 520
+ A+LT + VD+ M+
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSMR 421
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 127/252 (50%), Gaps = 11/252 (4%)
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
++ AK+G+L AF++F+E +R + S I++ L++ +A + A ++ R
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLF---RSMP 223
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
R S + +++LI+ Y +G+L+ A +L++ M + N +T ++ +++G +TA+
Sbjct: 224 ERNSGS-WSTLIKGYVDSGELNRAKQLFELMPE----KNVVSWTTLINGFSQTGDYETAI 278
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
S + +M + G P T + +L + SG + S ++++ + + G++ + TA++ +
Sbjct: 279 STYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMY 338
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNF 563
A +D AA + M +S + ++ + G A++ R M SG + +
Sbjct: 339 AKCGELDCAATVFSNMNHKDI---LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEV 395
Query: 564 IIRQLFESCMKN 575
+ + +C+ +
Sbjct: 396 VFLAVLTACLNS 407
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
++ +I ++ E A + ++ G K + T A+++ G I+ +
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI 319
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
LD + ++ AK G LD A +F M ++I +++++ GR
Sbjct: 320 LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILS----WTAMIQGWAVHGRF 375
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK-KAGFRPNYGLYTL 428
A++ + +M G +P ++ +++ + + ++D L +D M+ P Y L
Sbjct: 376 HQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVL 435
Query: 429 IVESNAKSGKLDTAMSIFNDM 449
+V+ ++GKL+ A + +M
Sbjct: 436 VVDLLGRAGKLNEAHELVENM 456
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 130/284 (45%), Gaps = 10/284 (3%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y ++ L K ++ A +K+ SG + + +IT F +G +++ +YE
Sbjct: 769 TYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELA 828
Query: 310 EAAQCSLDSSTYELMIPSLAKS-GRLDVAFKLFQ----EMKERNIRPSFGIFSSLVDSMG 364
+ + SL +I +L K+ G + A ++ E + R I+P FS ++ S+
Sbjct: 829 KTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLC 884
Query: 365 KAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
+ + A + ++M G P ++ ++ + +K G LD A + M+ G +P+
Sbjct: 885 RMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVY 944
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
YT+I+ AK G +D A I + +K +P TY L+ + + D A+KL N M
Sbjct: 945 TYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM 1004
Query: 485 TNAGLRPGMSTYTAILTLLASKKLVDVAAKILL-EMKAMGFSVD 527
G++P Y ++ K L A++L EMK G ++
Sbjct: 1005 DRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 1048
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 141/313 (45%), Gaps = 3/313 (0%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
S G ++ + N LI LF G +F+++ E + ++ TY L + +L K +D
Sbjct: 726 SCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDW 785
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
A + ++M + + +++ K G+ + A +Y + A+LI
Sbjct: 786 ACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLIT 845
Query: 397 SYTKA-GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
+ K G + A + ++ R ++ ++ S + + A ++ DM G
Sbjct: 846 ALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPA 905
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
P + ++ ++ + +G +D A ++ M + GL+P + TYT I++ A ++D A +I
Sbjct: 906 PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 965
Query: 516 LLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFES-CM 573
L E K + V+ ++ Y K D AL+ L MD G++ N +L +S C+
Sbjct: 966 LAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 1025
Query: 574 KNGLYESAKPLLE 586
K +E A+ L E
Sbjct: 1026 KALDWEKAEVLFE 1038
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 135/307 (43%), Gaps = 7/307 (2%)
Query: 313 QCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG-----IFSSLVDSMGKAG 367
+ ++ +S E ++ ++A R A+ L+ +KE + S G I + L+ GK G
Sbjct: 687 EITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLG 746
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
+ A ++ + FG P+A Y +E+ K +D A + ++M K+G
Sbjct: 747 KSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMG 806
Query: 428 LIVESNAKSGKLDTAMSIFNDME-KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
I+ K GK + A S++ + K LP + + + G + A ++ ++
Sbjct: 807 NIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSG 866
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASD-VLMVYIKDGSVDL 545
R G+ ++ ++ L + V A +LL+M + G + + + V+ K G +D
Sbjct: 867 EARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDE 926
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
A L+ M+S G++ + + + K G+ + A+ +L K+ V Y +++
Sbjct: 927 AKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIR 986
Query: 606 HLVRCQE 612
+ +E
Sbjct: 987 GYCKIEE 993
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 219 ALNQSRD--FDAIQSLFD-EMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
LNQ D + +Q L D ++ D S GI AY +V++ L ++E A ++
Sbjct: 263 CLNQMTDIAYFLLQPLRDANILVDKSDLGI----AYRKVVRGLCYEMRIEDAESVVLDME 318
Query: 276 GSGGKVDTQTYNALITLFL-NKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
G D Y+A+I N +P K+ +++ M + ++ ++ + G
Sbjct: 319 KHGIDPDVYVYSAIIEGHRKNMNIP-KAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNF 377
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
A+ LF+E +E NI ++ D++GK G+++ A++++ EM G G+ P Y +L
Sbjct: 378 SEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTL 437
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I GK A L EM G P+ +Y ++ A +G A ME G
Sbjct: 438 IGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGV 497
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
PT T++ ++E +G++D A Y S+ +
Sbjct: 498 KPTYVTHNMVIEGLIDAGELDKAEAFYESLEH 529
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 184/491 (37%), Gaps = 69/491 (14%)
Query: 177 MTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEM 236
++ ILQ + + + L+K R++ + CY + FDAL + + LF EM
Sbjct: 364 VSSILQCYCQMGNFSEAYDLFK-EFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
Query: 237 VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNK 296
+ K Y +I K AF ++ G+G D YN L
Sbjct: 423 ---TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATN 479
Query: 297 GLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK----------- 345
GL ++FE + ME T+ ++I L +G LD A ++ ++
Sbjct: 480 GLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMV 539
Query: 346 -------------ERNIRPSF----GIFSSLVDSM-GKAGRLDTAMKIYMEMRGFGLRPS 387
ER IR F ++ +L S+ + + A + M G+ P
Sbjct: 540 KGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPE 599
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+MY LI ++ + + A ++ + P+ YT+++ + + + A ++F
Sbjct: 600 KSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Query: 448 DMEKAGFLPTPSTYSCLL----------EMHAAS------------------GQVDSAMK 479
DM++ P TYS LL EM A +
Sbjct: 660 DMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYA 719
Query: 480 LYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVY-I 538
L+ M + P + TYT +L + L EMKA DV VL+ +
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLKNKPERNLSR-------EMKAFDVKPDVFYYTVLIDWQC 772
Query: 539 KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLV 598
K G + A R M SG+ + L C K G + AK + + + S K D+V
Sbjct: 773 KIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Query: 599 LYTSILAHLVR 609
YT+++A R
Sbjct: 833 PYTALIAGCCR 843
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 17/292 (5%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELA 267
P + Y L A + + + F+ +V +K + Y +I + + + A
Sbjct: 598 PEKSMYGKLIGAWCRVNNVRKAREFFEILV---TKKIVPDLFTYTIMINTYCRLNEPKQA 654
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+ F+ ++ K D TY+ L LN ++ MEA D Y +MI
Sbjct: 655 YALFEDMKRRDVKPDVVTYSVL----LNSD---PELDMKREMEAFDVIPDVVYYTIMINR 707
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
L + LF++MK R I P ++ L+ + K R + EM+ F ++P
Sbjct: 708 YCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--KPER-----NLSREMKAFDVKPD 760
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y LI+ K G L A R++D+M ++G P+ YT ++ K G L A IF+
Sbjct: 761 VFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFD 820
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
M ++G P Y+ L+ +G V A+KL M G++P ++ +A+
Sbjct: 821 RMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 41/296 (13%)
Query: 256 QYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCS 315
Y++KA+ L ++ G + + Y LI + K+ E +E + +
Sbjct: 579 DYISKAQDL------LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV 632
Query: 316 LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI 375
D TY +MI + + A+ LF++MK R+++P +S L++S D + +
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDM 685
Query: 376 YMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA------------------ 417
EM F + P Y +I Y L L+ +MK+
Sbjct: 686 KREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE 745
Query: 418 ----------GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEM 467
+P+ YT++++ K G L A IF+ M ++G P + Y+ L+
Sbjct: 746 RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIAC 805
Query: 468 HAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
G + A +++ M +G++P + YTA++ V A K++ EM G
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/517 (18%), Positives = 210/517 (40%), Gaps = 53/517 (10%)
Query: 130 DDHVMVGGLKKPFMNVT-----AVAKIVEVVKRWKWGPELETHLDKLQFLPNMTH---IL 181
D ++ + LK+ NVT A A ++ +V W +L+T L +L + ++
Sbjct: 70 DPYLALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVM 129
Query: 182 QALKIVNDIDASL--------SLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLF 233
LK + +++ SL +L K + + + + +L ++ D A+ L
Sbjct: 130 DLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLI 189
Query: 234 DEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
M+ D + F F +++ G D TY ++
Sbjct: 190 SRMIASGRSDMVVGF----------------------FWEIERLGLDADAHTYVLVVQAL 227
Query: 294 LNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNI---R 350
+ ++ + ++ Y I L + D+A+ L Q +++ NI +
Sbjct: 228 WRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDK 287
Query: 351 PSFGI-FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALR 409
GI + +V + R++ A + ++M G+ P +Y+++IE + K + A+
Sbjct: 288 SDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVD 347
Query: 410 LWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHA 469
++++M K R N + + I++ + G A +F + + Y+ +
Sbjct: 348 VFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALG 407
Query: 470 ASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVS 529
G+V+ A++L+ MT G+ P + YT ++ + A +++EM G + D+
Sbjct: 408 KLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 530 ASDVLMVYI-KDGSVDLALRWLRFMDSSGIR----TNNFIIRQLFESCMKNGLYESAKPL 584
+VL + +G A L+ M++ G++ T+N +I L ++ G + A+
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDA----GELDKAEAF 523
Query: 585 LETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLML 621
E+ + + + D + A C + ER + L
Sbjct: 524 YESLEHKSRENDASMVKGFCA--AGCLDHAFERFIRL 558
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 155/373 (41%), Gaps = 8/373 (2%)
Query: 234 DEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITL 292
+ +V D K GI Y+ +I+ K + A F K+ +++ ++++
Sbjct: 311 ESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQC 370
Query: 293 FLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
+ G +++++++ SLD Y + +L K G+++ A +LF+EM + I P
Sbjct: 371 YCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPD 430
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
+++L+ G+ A + +EM G G P +Y L G A
Sbjct: 431 VINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLK 490
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASG 472
M+ G +P Y + +++E +G+LD A + + +E + + +++ A+G
Sbjct: 491 MMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH----KSRENDASMVKGFCAAG 546
Query: 473 QVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASD 532
+D A + + + P +T +L A K + A +L M +G + S
Sbjct: 547 CLDHAFERFIRLEFP--LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYG 604
Query: 533 VLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNS 591
L+ + + +V A + + + I + F + + + + A L E
Sbjct: 605 KLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRR 664
Query: 592 AAKVDLVLYTSIL 604
K D+V Y+ +L
Sbjct: 665 DVKPDVVTYSVLL 677
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 155/375 (41%), Gaps = 10/375 (2%)
Query: 188 NDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISS 247
N ++L ++ ++Q WY P + Y LF L + D LF+ M+ + K I
Sbjct: 122 NRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTI-- 179
Query: 248 FDAYNRVIQYLAKAEKLELAFCCFKKVQG-SGGKVDTQTYNALITLFLNKGL--PYKSFE 304
D Y +I K+E L+ AF + ++ S K D T+ LI+ G KS
Sbjct: 180 -DVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIV 238
Query: 305 IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER-NIRPSFGIFSSLVDSM 363
+ S CS + TY +I K+G + + +M E + P +S++ S
Sbjct: 239 LEMSYLGVGCS--TVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY 296
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
G + Y + G++P T + LI S+ KAG + D M+K F
Sbjct: 297 GNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTT 356
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
Y +++E+ K+G+++ +F M+ G P TY L+ ++ +G V +
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 484 MTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGS 542
+ N+ + + I+ + ++ ++M+ D ++ + ++ Y G
Sbjct: 417 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI 476
Query: 543 VDLALRWLRFMDSSG 557
D + M SSG
Sbjct: 477 FDAVQELEKQMISSG 491
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 116/288 (40%), Gaps = 3/288 (1%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
TY + L + D A LF+ M ++P+ +++SL+ GK+ LD A M
Sbjct: 146 TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM 205
Query: 380 RGFG-LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
+ +P + LI K G+ D + EM G + Y I++ K+G
Sbjct: 206 KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM 265
Query: 439 LDTAMSIFNDM-EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
+ S+ DM E LP T + ++ + + Y+ G++P ++T+
Sbjct: 266 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSS 556
++ + ++ M+ FS+ V+ + V+ + K G ++ R M
Sbjct: 326 ILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQ 385
Query: 557 GIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
G++ N+ L + K GL +L VNS +D + I+
Sbjct: 386 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 433
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 8/268 (2%)
Query: 188 NDIDASLSLYKWAKRQ-SWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS 246
+D D L LY+ K + +V + Y L ++E V ++SK +S
Sbjct: 250 SDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMS 309
Query: 247 SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGG-----KVDTQTYNALITLFLNKGLPYK 301
+ AYN V++ L++ K + A F V+ V+ T+N ++ + G +
Sbjct: 310 AM-AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 302 SFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVD 361
+ E++ M +CS D+ ++ ++ L + L A KL+ EM+E+N++P + L+D
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 362 SMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRP 421
+ K G++D Y M LRP+ +Y L + KAGKLD A +D M + +
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD-MMVSKLKM 487
Query: 422 NYGLYTLIVESNAKSGKLDTAMSIFNDM 449
+ Y I+ + +++G+LD + I ++M
Sbjct: 488 DDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 122/250 (48%), Gaps = 9/250 (3%)
Query: 278 GGKVDTQT-YNALITLFLNKGLPYKSFEIYESM--EAAQCSLDSSTYELMIPSLAKSGRL 334
GG VD Y L+ + K + ++ E YE E ++ + + Y ++ +L+++G+
Sbjct: 267 GGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKF 326
Query: 335 DVAFKLFQEMKE-----RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
D A KLF +K+ R++ + G F+ +V+ G+ + AM+++ +M F P
Sbjct: 327 DEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTL 386
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
+ +L+ L A +L+ EM++ +P+ Y L++++ K GK+D + + M
Sbjct: 387 SFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTM 446
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
++ P + Y+ L + +G++D A ++ M + L+ Y I+ L+ +
Sbjct: 447 VESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV-SKLKMDDEAYKFIMRALSEAGRL 505
Query: 510 DVAAKILLEM 519
D KI+ EM
Sbjct: 506 DEMLKIVDEM 515
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/336 (17%), Positives = 139/336 (41%), Gaps = 44/336 (13%)
Query: 285 TYNALITLFLNKGLPYKSFEIYES-MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
TYN + +L+ P + E Y+ ++ A + +T+ +++ L + L+ A ++ ++
Sbjct: 167 TYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKED 226
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG--FGLRPSATMYASLIESYTKA 401
M + ++S L+ K D +K+Y E++ G +Y L++ Y
Sbjct: 227 MAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMK 286
Query: 402 GKLDTALRLWDEM--KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTP- 458
A+ ++E + + R + Y ++E+ +++GK D A+ +F+ ++K P
Sbjct: 287 EMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHL 346
Query: 459 ----STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
T++ ++ + A G+ + AM+++ M + P ++ ++ L +L+ A K
Sbjct: 347 AVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK 406
Query: 515 ILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMK 574
+ EM + ++ + + L ++C K
Sbjct: 407 LYGEM----------------------------------EEKNVKPDEYTYGLLMDTCFK 432
Query: 575 NGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRC 610
G + +T V S + +L +Y + L++
Sbjct: 433 EGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 162/431 (37%), Gaps = 88/431 (20%)
Query: 175 PNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFD 234
P ++ +L L+ +D +++ +KW K PN Y LL L S+ F
Sbjct: 80 PEISRVL--LRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLC 137
Query: 235 EMVQDSSKDG--------ISSFD-------AYNRVIQYLAKAEKLELAFCCFKKVQGSGG 279
E+++ +SK +S+ D ++ +++ K +E F F++V SG
Sbjct: 138 ELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGF 197
Query: 280 KV-----------------------------------DTQTYNALITLFLNKGLPYKSFE 304
V +T T+N L +F N + +
Sbjct: 198 SVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDD 257
Query: 305 IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMG 364
E ME D TY ++ S + GRL AF L++ M R + P ++SL+ +
Sbjct: 258 FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLC 317
Query: 365 KAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
K GR+ A + + M G++P Y +LI +Y K G + + +L EM P+
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDM----------------------------------- 449
+IVE + G+L +A++ ++
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRI 437
Query: 450 -EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
E+ G P TY+ L+E + ++ A+ L + N TY A++ L
Sbjct: 438 IEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGR 497
Query: 509 VDVAAKILLEM 519
A ++ EM
Sbjct: 498 NREAESLMAEM 508
>AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) |
chr1:6760032-6762581 FORWARD
Length = 725
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 104/196 (53%), Gaps = 1/196 (0%)
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
+KSG + A + F+ +K +RP I+ +++ AG+ ++ EM+ L+ S
Sbjct: 430 SKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASE 489
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRP-NYGLYTLIVESNAKSGKLDTAMSIFN 447
+Y +L+ +Y + G + A + M+ A P ++ Y+L VE+ K+G++D A S F+
Sbjct: 490 EVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFD 549
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
+M K G P + L+ + +D A++L + G+ G+ TYT ++ +A+
Sbjct: 550 EMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLG 609
Query: 508 LVDVAAKILLEMKAMG 523
L++ A ++L+++ +G
Sbjct: 610 LIEEAEQLLVKISQLG 625
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 246 SSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEI 305
+S Y+++I AK +E KK+ +G D T AL+ ++ G ++ E
Sbjct: 382 ASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEA 441
Query: 306 YESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGK 365
+E++++ D YE MI +G+ + +L +EM+ + ++ S ++ +L+ + +
Sbjct: 442 FENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQ 501
Query: 366 AGRLDTAMKIYMEMRGFGLRP-SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
G + A I M+ P S Y+ +E+Y KAG++D A +DEM+K G +P+
Sbjct: 502 MGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDK 561
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
+V + LD A+ + +EK G TY+ L++ A G ++ A +L +
Sbjct: 562 CIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKI 621
Query: 485 TNAGLRP 491
+ G P
Sbjct: 622 SQLGEAP 628
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 319 STYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
S Y +I AK ++ ++ ++M + I P ++LV K+G + A + +
Sbjct: 385 SDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFEN 444
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK 438
++ +GLRP +Y ++I Y AGK RL EM+ + + +Y ++ + A+ G
Sbjct: 445 LKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGD 504
Query: 439 LDTAMSIFNDMEKAGFLPTP-STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
+ A I + M+ A P YS +E + +GQVD A ++ M G +P
Sbjct: 505 ANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIA 564
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI 538
++ + +D A ++LL+++ G + V VL+ ++
Sbjct: 565 NLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWM 605
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 2/244 (0%)
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
+ E++ S +S L+ K ++ +I +M G+ P +L+ Y+K+G
Sbjct: 375 LDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGN 434
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
+ A ++ +K G RP+ +Y ++ +GK + +M+ + Y
Sbjct: 435 FERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMA 494
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRP-GMSTYTAILTLLASKKLVDVAAKILLEMKAM 522
LL +A G + A + +SM A P Y+ + VD A EM+ +
Sbjct: 495 LLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKL 554
Query: 523 GFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
G D ++++ Y + S+D ALR L ++ GI L + GL E A
Sbjct: 555 GHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEA 614
Query: 582 KPLL 585
+ LL
Sbjct: 615 EQLL 618
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/506 (21%), Positives = 205/506 (40%), Gaps = 92/506 (18%)
Query: 141 PFMNVTAVAKIVEVVKRW-------KWGPELETHLDKLQFLPNMTHILQALKIVNDIDAS 193
P +N V ++ KRW W + E + + + M IL + +AS
Sbjct: 69 PELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQ----NAS 124
Query: 194 LSLYKWAKRQSWYVPNEECYL------LLFDALNQSRDFDAIQSLFDEMVQDSSKDGISS 247
L K V N C++ L + D S+FD + + G+
Sbjct: 125 L------KALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRV----REMGLCV 174
Query: 248 FDAY--NRVIQYLAKAEK--LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSF 303
+AY N +++ ++K+ +EL K+++ G D T ++ ++ N G ++
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 304 EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSM 363
++ + ++ LD +++ S K G++D AF+L + ++ER+IR ++ + L+
Sbjct: 235 SVFNEI-LSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGF 293
Query: 364 GKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY 423
K R+D A +++ +MR G+ +Y LI K L+ AL L+ E+K++G P+
Sbjct: 294 VKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDR 353
Query: 424 G---------------------------------LYTLIVE------------------- 431
G LY + E
Sbjct: 354 GILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLM 413
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
N +S + + + D KA LP + S ++ + +VD A+ L + + GL P
Sbjct: 414 GNYESDGVSEIVKLLKDHNKA-ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIP 472
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKD-----GSVDLA 546
G Y I+ + + + + K+L EMK G + + + + G++DL
Sbjct: 473 GPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL- 531
Query: 547 LRWLRFMD-SSGIRTNNFIIRQLFES 571
L+ +RF I+ F++++L E+
Sbjct: 532 LKKMRFYGFEPWIKHTTFLVKKLCEN 557
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 288 ALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER 347
A+ L N+G+ + E++ + A D Y ++I +L K+ R A LF EM +
Sbjct: 585 AIDGLIKNEGVD-RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK 643
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA 407
++P+ ++S++D K G +D + + M P Y SLI +G+ A
Sbjct: 644 GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEM 467
+ W+EMK PN + +++ K G A+ F +ME+ P + Y L+
Sbjct: 704 IFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSS 763
Query: 468 HAASGQVDSAMKLYNSMTNAGLRP 491
+S +++ ++ M + G P
Sbjct: 764 FLSSENINAGFGIFREMVHKGRFP 787
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%)
Query: 235 EMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFL 294
++++D +K + D+ + VI L KA K+++A + +G YN +I
Sbjct: 426 KLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMC 485
Query: 295 NKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
+G +S ++ M+ A T + LA+ A L ++M+ P
Sbjct: 486 KEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIK 545
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+ LV + + GR A K ++ G G + I+ K +D L L+ ++
Sbjct: 546 HTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDI 605
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
G P+ Y +++++ K+ + A +FN+M G PT +TY+ +++ G++
Sbjct: 606 CANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEI 665
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
D + M P + TYT+++ L +
Sbjct: 666 DRGLSCIVRMYEDEKNPDVITYTSLIHGLCA 696
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 163/422 (38%), Gaps = 32/422 (7%)
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAF 268
N + Y +L + D LF++M + I+ +D +I L K + LE+A
Sbjct: 282 NYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDV---LIGGLCKHKDLEMAL 338
Query: 269 CCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
+ +++ SG D L+ F + E+ E +D + L+ SL
Sbjct: 339 SLYLEIKRSGIPPDRGILGKLLCSFSEES------ELSRITEVIIGDIDKKSVMLLYKSL 392
Query: 329 ----AKSGRLDVAFKLFQEM----------------KERN--IRPSFGIFSSLVDSMGKA 366
++ + A+ Q + K+ N I P S +++ + KA
Sbjct: 393 FEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKA 452
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
++D A+ + ++ GL P MY ++IE K G+ + +L+L EMK AG P+
Sbjct: 453 NKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTL 512
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
I A+ A+ + M GF P + L++ +G+ A K + +
Sbjct: 513 NCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAG 572
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLA 546
G M TA + L + VD ++ ++ A G DV A VL+ + +
Sbjct: 573 EGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 547 LRWL-RFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
L M S G++ + + K G + + D++ YTS++
Sbjct: 633 ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIH 692
Query: 606 HL 607
L
Sbjct: 693 GL 694
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 155/393 (39%), Gaps = 43/393 (10%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
AY+ +I+ L KA + A F ++ G K TYN++I + +G + M
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ + D TY +I L SGR A + EMK ++ P+ F +L+ + K G
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWS 735
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF---------- 419
A+ + EM + P + +Y SL+ S+ + ++ ++ EM G
Sbjct: 736 GEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYM 795
Query: 420 ---------------------RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTP 458
PNYG + ++ + S + ++S++ M + G LP
Sbjct: 796 LAVNVTSDVDYAYKFLSKLSDPPNYG-WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDH 854
Query: 459 STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLE 518
TY L++ + L+ S+ +GL + ++ + S + A K+ E
Sbjct: 855 MTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDE 914
Query: 519 MKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLY 578
M V+ + +L Y K G V A M + T + +I + +K G Y
Sbjct: 915 MPHKNL---VTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMI----DGYVKRGEY 967
Query: 579 ESAKPLLETYV----NSAAKVDLVLYTSILAHL 607
A + + + + A +V +V AHL
Sbjct: 968 NKALEIFDQMMRMGSSKANEVTMVSVICACAHL 1000
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 9/237 (3%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF-QE 343
T+N+++ + G + +++ M D T+ MI K G + A ++F Q
Sbjct: 922 TWNSILDAYAKSGDVVSARLVFDEMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQM 977
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M+ + + + S++ + G L+ ++ + L + + SLI+ Y K G
Sbjct: 978 MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGS 1037
Query: 404 LDTALRLWDEMKKAGFRPNYGL-YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYS 462
+ A W +A + L + I+ A G + ++ +F+ M ++ P T+
Sbjct: 1038 IGDA---WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFL 1094
Query: 463 CLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
CLL + G V A + S+ +G P Y ++ +L+ LV A + EM
Sbjct: 1095 CLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 1151
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
+ D +NA+I + G +S +++ M ++ D T+ ++ + + G + A+
Sbjct: 1052 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWH 1111
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
F+ +KE P ++ +VD + +AG + A EM ++P+ +M +L+
Sbjct: 1112 FFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP---IKPTGSMLGALLNGCI 1168
Query: 400 KAGKLDTALRLWDEMKKAGFRP-NYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
G L+ A + ++ + +P N G Y + A + + A S+ MEK G
Sbjct: 1169 NHGNLELAETVGKKLIE--LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKG 1221
>AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:644458-648421 REVERSE
Length = 852
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 188/418 (44%), Gaps = 40/418 (9%)
Query: 175 PNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNE-ECYLLLFDALNQSRDFDAIQSLF 233
PN+ +++ +L VN D +L + Q V + Y +L + D Q ++
Sbjct: 300 PNI-YVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIY 358
Query: 234 DEMVQDSSKDGISSFDA--YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALIT 291
E + S G+ DA Y +I+ A A+ + A ++ G +T T+++LI+
Sbjct: 359 KEAKRMESS-GLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLIS 417
Query: 292 LFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP 351
N GL ++ ++E M A+ C +S + +++ + ++ + D AF+LFQ K ++
Sbjct: 418 ACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNE 477
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
S D + GR T+ ++ G G SL+ + + + +
Sbjct: 478 SL-----YADDIVSKGR--TSSPNILKNNGPG---------SLVNRNSNSPYIQAS---- 517
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKS---GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMH 468
K+ F+P Y +++++ GK + ++M+ G P T+S L++M
Sbjct: 518 ---KRFCFKPTTATYNILLKACGTDYYRGK-----ELMDEMKSLGLSPNQITWSTLIDMC 569
Query: 469 AASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD- 527
SG V+ A+++ +M +AG RP + YT + + A K + +A + EM+ +
Sbjct: 570 GGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNW 629
Query: 528 VSASDVLMVYIKDGS---VDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAK 582
V+ + +L K GS V L + M ++G + N+ +++L E + + E+ +
Sbjct: 630 VTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVIQENGQ 687
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 102/216 (47%), Gaps = 6/216 (2%)
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
+I K G + ++ K+ P+ I +++D G G + IY ++
Sbjct: 238 IIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKEN 297
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
++P+ + SL+ + L L+++ M+ + Y +++++ +G++D A
Sbjct: 298 IKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQ 355
Query: 444 SIFND---MEKAGFLPTPS-TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
I+ + ME +G L + TY ++++ A + A+K+ + M + G+ P T++++
Sbjct: 356 DIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSL 415
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
++ A+ LV+ A + EM A G + ++L+
Sbjct: 416 ISACANAGLVEQANHLFEEMLASGCEPNSQCFNILL 451
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+ ++ GK G + + M Y + P+ + ++I+ G + +++++
Sbjct: 234 LLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDL 293
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
K +PN +Y + N S L + ++ +M+ ++Y+ LL+ +G+V
Sbjct: 294 LKENIKPN--IYVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRV 351
Query: 475 DSAMKLYNS---MTNAGL-RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA 530
D A +Y M ++GL + TY I+ + A K+ A K+ +MK++G + +
Sbjct: 352 DLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHT 411
Query: 531 -SDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYV 589
S ++ G V+ A M +SG N+ L +C++ Y+ A L +++
Sbjct: 412 WSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWK 471
Query: 590 NSAAKVDL 597
S+ L
Sbjct: 472 GSSVNESL 479
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 114/231 (49%), Gaps = 12/231 (5%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
T+NA+I+ + GL Y E+YE M+++ D T ++ S A G + ++ + +
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLV 283
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM--YASLIESYTKAG 402
+ P+ + ++ + + G L A + F + P ++ + ++I Y G
Sbjct: 284 ESNGFVPNVFVSNASISMYARCGNLAKARAV------FDIMPVKSLVSWTAMIGCYGMHG 337
Query: 403 KLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL-PTPSTY 461
+ L L+D+M K G RP+ ++ +++ + + SG D + +F M++ L P P Y
Sbjct: 338 MGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY 397
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
SCL+++ +G++D AM+ SM + P + + A+L K VD+A
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMP---VEPDGAVWGALLGACKIHKNVDMA 445
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 127/313 (40%), Gaps = 19/313 (6%)
Query: 279 GKVDTQTY--NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
G +T+ + ALI+++ GL + +++E E Q S S Y +I + ++
Sbjct: 82 GGCETEPFVLTALISMYCKCGLVADARKVFE--ENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
A +F+ MKE + LV L ++ + GL + S I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYT--LIVESNAKSGKLDTAMSIFNDMEKAGF 454
Y K G ++ RL+DEM P GL T ++ +++G + ++ M+ +G
Sbjct: 200 MYMKCGSVEAGRRLFDEM------PVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGV 253
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
P P T +L A G ++ + + G P + A +++ A + A
Sbjct: 254 CPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARA 313
Query: 515 I--LLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESC 572
+ ++ +K++ VS + ++ Y G ++ L M GIR + + + +C
Sbjct: 314 VFDIMPVKSL-----VSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 573 MKNGLYESAKPLL 585
+GL + L
Sbjct: 369 SHSGLTDKGLELF 381
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 101/267 (37%), Gaps = 35/267 (13%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
YNALI+ + + ++ M+ S+DS T ++P L + L +
Sbjct: 123 CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
+ + + +S + K G ++ +++ EM GL + ++I Y++ G
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL----ITWNAVISGYSQNGLA 238
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
L L+++MK +G P+ ++ S A G + +E GF+P +
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNAS 298
Query: 465 LEMHAASGQVDSA-------------------------------MKLYNSMTNAGLRPGM 493
+ M+A G + A + L++ M G+RP
Sbjct: 299 ISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 494 STYTAILTLLASKKLVDVAAKILLEMK 520
+ + +L+ + L D ++ MK
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMK 385
>AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17160224-17162221 REVERSE
Length = 665
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 130/293 (44%), Gaps = 13/293 (4%)
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV 360
+ ++ +M++A +E +I + + V +L++ ++ER S + + L+
Sbjct: 329 RVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLI 388
Query: 361 DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY-------TKAGKLDTALRLWDE 413
MGKA + A++IY ++ G P+ Y ++ + +K G +RL ++
Sbjct: 389 WLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNK 448
Query: 414 MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQ 473
M+ G +P + ++ + +K+ + A+ IF M G PT +Y LL
Sbjct: 449 MEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKL 508
Query: 474 VDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASD 532
D A +++N M G+ P + YT + ++L ++ ++ +L EM + G V+ +
Sbjct: 509 YDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNA 568
Query: 533 VLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLL 585
V+ ++G +A W M S + N L E+ L AKP L
Sbjct: 569 VISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEA-----LANDAKPRL 616
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 131/296 (44%), Gaps = 7/296 (2%)
Query: 247 SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY 306
S + + R+I + E + +K+++ ++ N LI L + + EIY
Sbjct: 345 SREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIY 404
Query: 307 ESMEAAQCSLDSSTYELMIP-------SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
E + ++ +YEL++ + +K G +L +M+++ ++P ++++
Sbjct: 405 EDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAV 464
Query: 360 VDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
+ + KA A++I+ M G +P+ Y +L+ + K D A R+W+ M K G
Sbjct: 465 LVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGI 524
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMK 479
PN YT + K + ++ +M G P+ T++ ++ A +G A +
Sbjct: 525 EPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYE 584
Query: 480 LYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
++ M + + P TY ++ LA+ +A ++ ++ + G + D ++
Sbjct: 585 WFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 158 WKWGPELETHLDKLQFLPNMTH---ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYL 214
W+WG L ++ P H +L A ++ A++ ++K A + P Y
Sbjct: 439 WRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK-AMVDNGEKPTVISYG 497
Query: 215 LLFDALNQSRDFDAIQSLFDEMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKK 273
L AL + + +D +++ M+ K GI + AY + L +K L K+
Sbjct: 498 ALLSALEKGKLYDEAFRVWNHMI----KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKE 553
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
+ G + T+NA+I+ GL ++E + M++ + TYE++I +LA +
Sbjct: 554 MASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAK 613
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDS 362
+A++L + + ++ S + ++V S
Sbjct: 614 PRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 77/187 (41%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
+N V+ +KA + A FK + +G K +Y AL++ L ++F ++ M
Sbjct: 461 WNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI 520
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ Y M L + ++ L +EM + I PS F++++ + G
Sbjct: 521 KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSG 580
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
A + + M+ + P+ Y LIE+ K A L + + G + + Y +V
Sbjct: 581 VAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Query: 431 ESNAKSG 437
+S G
Sbjct: 641 KSAETYG 647
>AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: EMB2745 (EMBRYO
DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 13180 Blast hits
to 4377 proteins in 153 species: Archae - 4; Bacteria -
12; Metazoa - 210; Fungi - 191; Plants - 12251; Viruses
- 0; Other Eukaryotes - 512 (source: NCBI BLink). |
chr1:29087145-29088521 FORWARD
Length = 458
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
E + + +++ ++ L + G + A F MKE + +P ++++++++ + G
Sbjct: 157 ENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNF 216
Query: 370 DTAMKIY--MEMRGFGLRPSATMYASLIESYTKAG-----------KLDTALRLWDEMKK 416
A + M++ GF P Y LI SY + G ++ A R++ EM
Sbjct: 217 KKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLF 276
Query: 417 AGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDS 476
GF P+ Y +++ K+ ++ A+ +F DM+ G +P TY+ + ++ + +++
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 477 AMKLYNSMTNAGLR-PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
A+++ +M G PG STYT ++ L + A +++EM G
Sbjct: 337 AIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 357 SSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKK 416
+ L+ +G+ G + A+ + M+ + +P Y ++I + + G A L D+M+
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 417 AGFR--PNYGLYTLIVESNAKSG-----------KLDTAMSIFNDMEKAGFLPTPSTYSC 463
GFR P+ YT+++ S + G ++ A +F +M GF+P TY+C
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
L++ + ++ A++L+ M G P TY + + + ++ A +++ MK +G
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 524 FSVDVSASDVLMVY 537
V S++ +++
Sbjct: 349 HGVPGSSTYTPLIH 362
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 144/339 (42%), Gaps = 14/339 (4%)
Query: 185 KIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDG 244
K+ + +L + W + + NE + L + DF + ++ + +
Sbjct: 102 KVSIGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKN 161
Query: 245 ISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFE 304
+ + + +++ L + ++ A F +++ K D YN +I G K+
Sbjct: 162 VVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARF 221
Query: 305 IYESME--AAQCSLDSSTYELMIPSLAKSG-----------RLDVAFKLFQEMKERNIRP 351
+ + M+ + D+ TY ++I S + G R+ A ++F+EM R P
Sbjct: 222 LLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVP 281
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
++ L+D K R+ A++++ +M+ G P+ Y S I Y+ +++ A+ +
Sbjct: 282 DVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMM 341
Query: 412 DEMKKAGFR-PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
MKK G P YT ++ + ++ + A + +M +AG +P TY + + ++
Sbjct: 342 RTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSS 401
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
G + + + G++ S I +A K++V
Sbjct: 402 EGLASTLDEELHKRMREGIQQRYSRVMKIKPTMARKEVV 440
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 157/366 (42%), Gaps = 12/366 (3%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
VI K L A K+ G G KV+ + ++ + + ++ E ++
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMN 383
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
LD Y + +L+K GR++ AF+L QEMK+R I P +++L+D G++ A+
Sbjct: 384 IFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDAL 443
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
+ EM G G+ P Y L+ + G + L +++ MK G +PN ++I+E
Sbjct: 444 DLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL 503
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
+ K+ A F+ +E+ P + ++ + +G A K + + LR
Sbjct: 504 CFARKVKEAEDFFSSLEQ----KCPENKASFVKGYCEAGLSKKAYKAFVRLEYP-LRK-- 556
Query: 494 STYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSAS---DVLMVYIKDGSVDLALRWL 550
S Y + L + ++ A +L +M A + V+ S ++ + K +V A
Sbjct: 557 SVYIKLFFSLCIEGYLEKAHDVLKKMSA--YRVEPGRSMCGKMIGAFCKLNNVREAQVLF 614
Query: 551 RFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRC 610
M G+ + F + + + + A+ L E K D+V YT +L ++
Sbjct: 615 DTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKL 674
Query: 611 QEEQNE 616
E +E
Sbjct: 675 DPEHHE 680
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 153/385 (39%), Gaps = 81/385 (21%)
Query: 212 CYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGI-SSFDAYNRVIQYLAKAEKLELAFCC 270
CY + FDAL++ ++ F E++Q+ GI Y +I K+ A
Sbjct: 390 CYNVAFDALSK---LGRVEEAF-ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDL 445
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
++ G+G D TYN L++ G + EIYE M+A ++ T ++I L
Sbjct: 446 IDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCF 505
Query: 331 SGRLDVAFKLFQEMKER--NIRPSF--------------------------GIFSSLVDS 362
+ ++ A F ++++ + SF ++ L S
Sbjct: 506 ARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFS 565
Query: 363 MGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN 422
+ G L+ A + +M + + P +M +I ++ K + A L+D M + G P+
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 423 YGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL-----------EMHAAS 471
YT+++ + + +L A S+F DM++ G P TY+ LL E +
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQ 685
Query: 472 GQV-------------------------------------DSAMKLYNSMTNAGLRPGMS 494
G+V + A +L++ M ++GL P M
Sbjct: 686 GEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Query: 495 TYTAILTLLASKKLVDVAAKILLEM 519
YT +++ K +D+A ++ E+
Sbjct: 746 AYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 140/343 (40%), Gaps = 64/343 (18%)
Query: 231 SLFDE----MVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
+FDE + Q D + A N ++ + + K+ + FK+++ G + TY
Sbjct: 160 GMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTY 219
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSST---YELMIPSLAKSGRLDVAFKLFQE 343
++ KG + E EAA +++ + Y+ I L +G + A L E
Sbjct: 220 AIVVKALCRKG----NLE-----EAAMLLIENESVFGYKTFINGLCVTGETEKAVALILE 270
Query: 344 MKER------NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR--GFGLRPSATMYASLI 395
+ +R ++R G+ +V ++ A + +EM GFGL A + ++I
Sbjct: 271 LIDRKYLAGDDLRAVLGM---VVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACL--AVI 325
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE------------------------ 431
+ Y K L AL D+M G + N + +LI++
Sbjct: 326 DRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIF 385
Query: 432 -----------SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
+ +K G+++ A + +M+ G +P Y+ L++ + G+V A+ L
Sbjct: 386 LDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDL 445
Query: 481 YNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
+ M G+ P + TY +++ LA + +I MKA G
Sbjct: 446 IDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEG 488
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDS-------------- 362
D TY +MI + + L A LF++MK+R I+P ++ L+D
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSV 684
Query: 363 MGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN 422
G+ G+ A ++ E G+ Y LI+ K L+ A L+D M +G P+
Sbjct: 685 QGEVGK-RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPD 743
Query: 423 YGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
YT ++ S + G +D A+++ ++ K +P+ S
Sbjct: 744 MVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSES 780
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%)
Query: 308 SMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
ME LD +I K+ L A +M + ++ + I S ++ K
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
A++ + E R + Y ++ +K G+++ A L EMK G P+ YT
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYT 427
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
+++ GK+ A+ + ++M G P TY+ L+ A +G + +++Y M
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 488 GLRPGMSTYTAIL 500
G +P T + I+
Sbjct: 488 GPKPNAVTNSVII 500
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46100.1). | chr4:575843-577243 REVERSE
Length = 466
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 140/322 (43%), Gaps = 4/322 (1%)
Query: 196 LYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVI 255
++ +A +Q + + +L+L L + R F+ I D + + S + + + +I
Sbjct: 70 IFDYASQQPNFRHSRSSHLILILKLGRGRYFNLID---DVLAKHRSSGYPLTGEIFTYLI 126
Query: 256 QYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFL-NKGLPYKSFEIYESMEAAQC 314
+ A+A+ E F K+ + N ++ + + ++G K+FE+++S
Sbjct: 127 KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGV 186
Query: 315 SLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMK 374
++ +Y L++ + + L +A++LF +M ER++ P + L+ + G+++ AM+
Sbjct: 187 MPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAME 246
Query: 375 IYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNA 434
+ +M G P Y +L+ S + +L A +L MK G P+ Y ++
Sbjct: 247 LLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFC 306
Query: 435 KSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMS 494
+ + A + +DM G P +Y L+ G D K M + G P S
Sbjct: 307 REDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 366
Query: 495 TYTAILTLLASKKLVDVAAKIL 516
++ S V+ A ++
Sbjct: 367 VSNCLVKGFCSFGKVEEACDVV 388
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 122/268 (45%), Gaps = 6/268 (2%)
Query: 252 NRVIQYLAKAEK-LELAFCCFKKVQGSGGKVDTQTYNALITLF-LNKGLPYKSFEIYESM 309
NR++ L L+ AF FK + G +T++YN L+ F LN L +++++ M
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI-AYQLFGKM 216
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
D +Y+++I + G+++ A +L +M + P +++L++S+ + +L
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A K+ M+ G P Y ++I + + + A ++ D+M G PN Y +
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ G D +M GF P S +CL++ + G+V+ A + + G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILL 517
T+ ++ L+ ++ D + KI L
Sbjct: 397 TLHSDTWEMVIPLICNE---DESEKIKL 421
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 2/240 (0%)
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY-TKAGKLDTALRLWDE 413
IF+ L+ +A + + + +M F P +++ + G L A L+
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 414 MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQ 473
+ G PN Y L++++ + L A +F M + +P +Y L++ GQ
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 474 VDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASD 532
V+ AM+L + M N G P +YT +L L K + A K+L MK G + D V +
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 533 VLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSA 592
+++ + ++ A + L M S+G N+ R L G+++ K LE ++
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 1/264 (0%)
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL-AKS 331
K + SG + + + LI ++ LP K + M + ++ L +
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
G L AF+LF+ + + P+ ++ L+ + L A +++ +M + P Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
LI+ + + G+++ A+ L D+M GF P+ YT ++ S + +L A + M+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
G P Y+ ++ + A K+ + M + G P +Y ++ L + + D
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 512 AAKILLEMKAMGFSVDVSASDVLM 535
K L EM + GFS S S+ L+
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLV 372
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 4/239 (1%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGI-SSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
+ D L R + +Q F E+ + S G+ + +YN ++Q + L +A+ F K+
Sbjct: 160 ILDVLVSHRGY--LQKAF-ELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
D +Y LI F KG + E+ + M D +Y ++ SL + +L
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
A+KL MK + P +++++ + R A K+ +M G P++ Y +L
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
I G D + +EM GF P++ + +V+ GK++ A + + K G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 113/229 (49%), Gaps = 9/229 (3%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D T+ MI + G +D AFKLF+EMK+ N+ P I ++V + G+ G + IY
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+ +R + +L+ Y AG +D A + +K R N + T +V +K
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF---RKMSVR-NLFVSTAMVSGYSKC 291
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
G+LD A IF+ EK + ++ ++ + S A++++ M +G++P + +
Sbjct: 292 GRLDDAQVIFDQTEKKDLV----CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVD 544
++++ A+ ++D A + + G ++S ++ L+ +Y K G +D
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 108/499 (21%), Positives = 204/499 (40%), Gaps = 80/499 (16%)
Query: 168 LDKLQFLPNMTHILQALKIVNDIDASLSLYKWA-KRQSWYVPNEECYLLLFDALNQSRDF 226
LD+ FLP IL+A+ V+ + + L+ A K + P E + D
Sbjct: 109 LDQFSFLP----ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFM--DMYASCGRI 162
Query: 227 DAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY 286
+ +++FDEM S +D ++ +N +I+ + ++ AF F++++ S D
Sbjct: 163 NYARNVFDEM---SHRDVVT----WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
+++ G + IYE + +D+ ++ A +G +D+A + F++M
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
RN+ S +++V K GRLD A I+ + + + ++I +Y ++
Sbjct: 276 RNLFVS----TAMVSGYSKCGRLDDAQVIFDQTE----KKDLVCWTTMISAYVESDYPQE 327
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLE 466
ALR+++EM +G +P+ ++ + A G LD A + + + G S + L+
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 467 MHAASGQVDS-------------------------------AMKLYNSMTNAGLRPGMST 495
M+A G +D+ A+ L+ M + P T
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 496 YTAILTLLASKKLVDVAAKILLEM----------KAMGFSVDVSASDVLMVYIKDGSVDL 545
+ +L + LV+ KI M + G VD+ G +L
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLF-----------GRANL 496
Query: 546 ALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYE----SAKPLLETYVNSAAKVDLVLYT 601
L ++S + +N I L +C +G E +AK +LE + LVL +
Sbjct: 497 LREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGA--LVLMS 554
Query: 602 SILAHLVRCQEEQNERHLM 620
+I A R ++ +N R +M
Sbjct: 555 NIYAREQRWEDVRNIRRVM 573
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 195/468 (41%), Gaps = 12/468 (2%)
Query: 160 WGPELETHLDKLQFLPNMTHILQALKI----VNDIDASLSLYKWAKRQSWYVPNEECYLL 215
W P +E L L F +++ L A I +N +L + WA +Q Y + Y
Sbjct: 28 WSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHS 87
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
+F +L+ SR F A+ +LF ++ S+K + S Y +I L K + AF ++
Sbjct: 88 IFKSLSLSRQFSAMDALFKQV--KSNKILLDS-SVYRSLIDTLVLGRKAQSAFWVLEEAF 144
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
+G ++ N L+ + G + +++ M SL++ + + I +S +
Sbjct: 145 STGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETN 204
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLV-DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
+L E+K+ N+ + I + L+ S+ K R A I E+R +P Y +
Sbjct: 205 QLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVI 264
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
E++ G L + + +K G P Y + + +L A + ++ +G
Sbjct: 265 AEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEV-AEVIVSGK 323
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
P + L ++ DSA++ M + G P + T + + L D K
Sbjct: 324 FPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIK 383
Query: 515 ILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCM 573
+ + G+ ++ + +++ ++ K G V + L+ M G+ + + L E+C
Sbjct: 384 AYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACC 443
Query: 574 KNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHLML 621
K + AK L + K++L Y ++ L +E + E L L
Sbjct: 444 KAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKL--SEEGEAEESLRL 489
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 121/242 (50%), Gaps = 11/242 (4%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
+Y LMI L K+GR+ ++ QEMK+ + P ++++L+++ KA + A K++ EM
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
G + + T Y LI ++ G+ + +LRL+D+M + G P+ +Y ++E K K+
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 440 DTAMSIFND-MEKAGFLPTP---STYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
+ AM +F ME+ T S + L + SG+ ++ + + G
Sbjct: 519 EAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHLEHTG------A 572
Query: 496 YTAILTLLASKKLVDVAAKILLEMKAMGFS-VDVSASDVLMVYIKDGSVDLALRWLRFMD 554
+ +L +A K V++ + + +K + S V +SD+L + D L ++R ++
Sbjct: 573 HVVLLKCVADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFCSSSDPDSILPFIRAIE 632
Query: 555 SS 556
++
Sbjct: 633 NT 634
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 80/155 (51%)
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP 386
+L + + D K ++ + + +S ++ + KAGR+ + EM+ GL P
Sbjct: 371 NLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAP 430
Query: 387 SATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIF 446
++Y +LIE+ KA + A +LWDEM G + N Y +++ ++ G+ + ++ +F
Sbjct: 431 DVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLF 490
Query: 447 NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLY 481
+ M + G P + Y L+E ++++AM+++
Sbjct: 491 DKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 75/137 (54%)
Query: 240 SSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLP 299
SSK S +Y+ +I +L KA ++ ++ ++++ G D YNALI +
Sbjct: 389 SSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMI 448
Query: 300 YKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSL 359
+ ++++ M C ++ +TY ++I L++ G + + +LF +M ER I P I+ SL
Sbjct: 449 RPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSL 508
Query: 360 VDSMGKAGRLDTAMKIY 376
++ + K +++ AM+++
Sbjct: 509 IEGLCKETKIEAAMEVF 525
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 128/302 (42%), Gaps = 5/302 (1%)
Query: 214 LLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKK 273
L+L SR+ DA L + D D F AY + + L KK
Sbjct: 228 LILHSLCKCSREMDAFYILEELRNIDCKPD----FMAYRVIAEAFVVTGNLYERQVVLKK 283
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
+ G + Y A I ++ ++ E+ E + + + +D+ + +I S++
Sbjct: 284 KRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDP 343
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
D A + M P+ S L ++ + + D +K Y + G Y+
Sbjct: 344 -DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSL 402
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+I KAG++ + EMKK G P+ LY ++E+ K+ + A ++++M G
Sbjct: 403 MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAA 513
+TY+ L+ + G+ + +++L++ M G+ P + Y +++ L + ++ A
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Query: 514 KI 515
++
Sbjct: 523 EV 524
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
++ L K + AF ++++ K D Y + F+ G Y+ + +
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSM-GKAGRLD-- 370
+ SS Y I L + RL A +E+ E + F + + ++D++ G +D
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEA----KEVAEVIVSGKFPMDNDILDALIGSVSAVDPD 344
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
+A++ + M G P+ + L ++ + K D ++ ++ + G+ Y+L++
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
K+G++ + + +M+K G P S Y+ L+E + + A KL++ M G +
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCK 464
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD 527
++TY ++ L+ + + + ++ +M G D
Sbjct: 465 MNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD 501
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
+ Q+Y+ +I+ G +S+ + M+ + D S Y +I + K+ + A KL+
Sbjct: 396 ELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
EM + + ++ L+ + + G + +++++ +M G+ P T+Y SLIE K
Sbjct: 456 DEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKE 515
Query: 402 GKLDTALRLW----DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
K++ A+ ++ + K R + L + SN SG+ + +E G
Sbjct: 516 TKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHLEHTG 571
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 21/307 (6%)
Query: 223 SRDFDAIQSLFDE-MVQDSS----KDGISSFDAYNRVIQYLAKAEKLELAF---CCFKKV 274
SR + + S+ +E M++DSS +DG S FDAY + ++ L F F +
Sbjct: 89 SRTKNGVSSVLEEVMLEDSSSSVKRDGWS-FDAYG--LSSAVRSCGLNRDFRTGSGFHCL 145
Query: 275 QGSGGKV-DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
GG + D ++L+ L+ + G +++++E M + ++ MI A+ R
Sbjct: 146 ALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPER----NVVSWTAMISGFAQEWR 201
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
+D+ KL+ +M++ P+ F++L+ + +G L ++ + GL+ + S
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN-DMEKA 452
LI Y K G L A R++D+ + ++ A+ G A+ +F M K+
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVS----WNSMIAGYAQHGLAMQAIELFELMMPKS 317
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G P TY +L +G V K +N M GL+P ++ Y+ ++ LL L+ A
Sbjct: 318 GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEA 377
Query: 513 AKILLEM 519
+++ M
Sbjct: 378 LELIENM 384
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 167/362 (46%), Gaps = 31/362 (8%)
Query: 174 LPNMTHILQALKIVNDID-----ASLSLY-KWAKRQSWY-----VPNEE--CYLLLFDAL 220
+ M H Q +K D+D A +++Y K K ++ Y +PN++ C+ ++ L
Sbjct: 263 MGRMLHC-QIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGL 321
Query: 221 NQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGK 280
+ + +F EM+Q S +SS +A V+ A+ +L V G
Sbjct: 322 MRLGRAEKALIVFSEMLQSGSD--LSS-EAIASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 281 VDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
+DT N+LIT++ G KS I+E M D ++ +I A++ L A L
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNER----DLVSWNAIISGYAQNVDLCKALLL 434
Query: 341 FQEMKERNIR--PSFGIFSSLVDSMGKAGRLDTAMKIY-MEMRGFGLRPSATMYASLIES 397
F+EMK + ++ SF + SL+ + AG L I+ + +R F +RP + + +L++
Sbjct: 435 FEEMKFKTVQQVDSFTVV-SLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDM 492
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
Y+K G L+ A R +D + + +++ GK D A+ I+++ +G P
Sbjct: 493 YSKCGYLEAAQRCFDSISWKDVVS----WGILIAGYGFHGKGDIALEIYSEFLHSGMEPN 548
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMT-NAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
+ +L + +G V +K+++SM + G+ P ++ LL K ++ A K
Sbjct: 549 HVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFY 608
Query: 517 LE 518
E
Sbjct: 609 KE 610
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 141/331 (42%), Gaps = 20/331 (6%)
Query: 264 LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYEL 323
LE+ ++ +G VD ALIT++L G S+ + E++ D + +
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK----DVVCWTV 316
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
MI L + GR + A +F EM + S +S+V S + G D ++ G+
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH----GYV 372
Query: 384 LRPSATM----YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
LR T+ SLI Y K G LD +L +++ M + + I+ A++ L
Sbjct: 373 LRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVS----WNAIISGYAQNVDL 428
Query: 440 DTAMSIFNDMEKAGFLPTPS-TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
A+ +F +M+ S T LL+ +++G + ++ + + +RP TA
Sbjct: 429 CKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTA 488
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGI 558
++ + + ++ A + ++ + VS ++ Y G D+AL SG+
Sbjct: 489 LVDMYSKCGYLEAAQRCF---DSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGM 545
Query: 559 RTNNFIIRQLFESCMKNGLYESAKPLLETYV 589
N+ I + SC NG+ + + + V
Sbjct: 546 EPNHVIFLAVLSSCSHNGMVQQGLKIFSSMV 576
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 146/356 (41%), Gaps = 45/356 (12%)
Query: 283 TQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQ 342
T+ +N+ I + G + + SM A + D+ T+ ++ + A RL + Q
Sbjct: 11 TKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQ 70
Query: 343 EMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAG 402
++ F I SSLV+ K G L A K++ EMR + ++I Y++AG
Sbjct: 71 QVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR----ERDVVHWTAMIGCYSRAG 126
Query: 403 KLDTALRLWDEMKKAGFRPN--------------------------YGLYTLIVESNA-- 434
+ A L +EM+ G +P YG I N+
Sbjct: 127 IVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSML 186
Query: 435 ----KSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
K + A +F+ ME+ + +++ ++ +A+ G + +KL M GLR
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMV----SWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRW 549
P T+ A L++ + +++ + ++ GF VD+ L+ +Y+K G + + R
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
L + + + +I L M+ G E A + + S + + S++A
Sbjct: 303 LETIPNKDVVCWTVMISGL----MRLGRAEKALIVFSEMLQSGSDLSSEAIASVVA 354
>AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4445461-4447290 FORWARD
Length = 609
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/341 (18%), Positives = 160/341 (46%), Gaps = 7/341 (2%)
Query: 213 YLLLFDALNQS-RDFDAIQSLFDEMVQDSSKDGI-SSFDAYNRVIQYLAKAEKLELAFCC 270
Y ++ +L +S R F+A+ E++++ GI S + Y+ +I+ A+A ++ +
Sbjct: 251 YTIVCSSLAKSGRAFEAL-----EVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKL 305
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
FK+ G D + ++ +++ +G + E+ +M A+ + ++ +K
Sbjct: 306 FKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSK 365
Query: 331 SGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
A K+++ + ++ +++ + + + A ++ EM G
Sbjct: 366 QRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVA 425
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
Y+++++ Y K +L A+RL +MK+ G +PN +Y +++ + ++ L A I+ +M+
Sbjct: 426 YSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMK 485
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
+A LP +Y+ ++ + S +++ ++LY + + ++ + + +D
Sbjct: 486 RAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRID 545
Query: 511 VAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLR 551
++L +MK G +D + ++D ++ +RWL+
Sbjct: 546 ELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQ 586
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 51/321 (15%)
Query: 239 DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGL 298
D++ G + Y+ IQ + + Q G + Y ++ G
Sbjct: 177 DAAMKGFNKLQMYSSTIQVFDRLK------------QSVGVEPSPGCYCRIMEAHEKIGE 224
Query: 299 PYKSFEIYESMEAAQCSL----DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
+K E+++ ++ + S S Y ++ SLAKSGR A ++ +EMK++ I S
Sbjct: 225 NHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSE 284
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
++S L+ + +A + K++ E G L M ++ Y + G ++T L + M
Sbjct: 285 LYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAM 344
Query: 415 KKA--------------------GFRPNYGLYTLIVESNAKSGKLDTAMSI--------- 445
+KA GF +Y ++ ++G++ A++I
Sbjct: 345 RKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKY 404
Query: 446 ------FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
F++M K GF YS +++M+ + ++ A++L M G +P + Y ++
Sbjct: 405 NKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSL 464
Query: 500 LTLLASKKLVDVAAKILLEMK 520
+ + + A KI EMK
Sbjct: 465 IDMHGRAMDLRRAEKIWKEMK 485
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 135/325 (41%), Gaps = 5/325 (1%)
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNI----RPSFGIFSSLVDSMGKAGRLDTAMKIY 376
Y ++ + K G +LFQE K + + + S I++ + S+ K+GR A+++
Sbjct: 212 YCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVL 271
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
EM+ G+ S+ +Y+ LI ++ +A ++ +L+ E + + +V +
Sbjct: 272 EEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVRE 331
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
G ++T + + M KA T ++ + A+K+Y G TY
Sbjct: 332 GNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTY 391
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWLRFMDS 555
+ + + A + EM GF V A S+++ +Y K + A+R + M
Sbjct: 392 AIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQ 451
Query: 556 SGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQN 615
G + N +I L + + A+ + + + D V YTS+++ R +E +
Sbjct: 452 RGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELER 511
Query: 616 ERHLMLILGATRHKAHKFMCGLFTG 640
L R K + M G+ G
Sbjct: 512 CVELYQEFRMNRGKIDRAMAGIMVG 536
>AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24672008-24673471 REVERSE
Length = 487
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 175/397 (44%), Gaps = 18/397 (4%)
Query: 146 TAVAKIVEVVKRWKWG-PELETHLDKLQFLPN---MTHILQALKIVNDIDASLSLYKWAK 201
TA+ +++ +V G +LE +L+++ P+ +T ++++ K L + W+
Sbjct: 35 TALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSC 94
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
+ +++ + + L + +D A+Q L ++ +++ +F V + L K
Sbjct: 95 KSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI---VAETLVKV 151
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
K E A FK + D T A+I+ ++G ++ + + + S Y
Sbjct: 152 GKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVY 211
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGK-------AGRLDTAMK 374
++ + + A ++ Q+MK I P F+SL+ + + +G + A+
Sbjct: 212 RSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALN 271
Query: 375 IYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNA 434
I +EMR + ++P++ Y L+ + ++ + ++ ++MK++G P+ G Y +V
Sbjct: 272 IMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLY 331
Query: 435 KSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMS 494
+G+ I ++M + GF P Y L+ + +V+ A++L+ M R +
Sbjct: 332 LTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMK----RSSVG 387
Query: 495 TYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSAS 531
Y + LL K + E+ S+DV+ S
Sbjct: 388 GYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLS 424
>AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19214445-19215878 REVERSE
Length = 477
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 7/276 (2%)
Query: 305 IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMG 364
+ ES +C ++ T +++ ++ D A + ++ E N+ ++ ++
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 365 KAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
G L+ A + EM GL P Y S+I Y AGK+D A RL EM K N
Sbjct: 177 DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSV 236
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEK--AGFLPTPS--TYSCLLEMHAASGQVDSAMKL 480
Y+ I+E KSG ++ A+ + +MEK G L +P+ TY+ +++ +V+ A+ +
Sbjct: 237 TYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLV 296
Query: 481 YNSMTNAGLRPGMSTYTAILT-LLASKKLVDVAAKILLEM-KAMGFSVDVSASDVLMVYI 538
+ M N G P T ++ +L + + V +K++ ++ K G S+ S + I
Sbjct: 297 LDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLI 356
Query: 539 KDGSVDLALRWLRFMDSSGIRTNNFIIRQLF-ESCM 573
+ + A + R M G+R + +F E C+
Sbjct: 357 RMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL 392
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 281 VDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
V+ +T ++TL L ++ + D+ Y L+I A G L++A L
Sbjct: 128 VNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADML 187
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
+EM + P ++S+++ AG++D A ++ EM ++ Y+ ++E K
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 401 AGKLDTALRLWDEMKKAG----FRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
+G ++ AL L EM+K PN YTL++++ + +++ A+ + + M G +P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 457 TPSTYSCLLE--------MHAASGQVDSAMKL 480
T L++ + A S +D +KL
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKL 339
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 34/244 (13%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
AYN VI+ A L +A K++ G D TY ++I + N G ++ + + M
Sbjct: 167 AYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEM 226
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
C L+S TY ++ + KSG ++ A +L EM++ +
Sbjct: 227 SKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKED--------------------- 265
Query: 370 DTAMKIYMEMRGFGL-RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
G GL P+A Y +I+++ + +++ AL + D M G PN +
Sbjct: 266 -----------GGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 429 IVESNAKSGKLDTAMS-IFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
+++ ++ + A+S + + + K G + +S + + A K++ M
Sbjct: 315 LIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVR 374
Query: 488 GLRP 491
G+RP
Sbjct: 375 GVRP 378
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 9/240 (3%)
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A CC ++V K D +NA+IT + +G + E+++SM + +++ +I
Sbjct: 132 ALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK----NVTSWTTVIS 187
Query: 327 SLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
+++G A K+F M K+++++P+ S++ + G L+ ++ R G
Sbjct: 188 GFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFF 247
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
+ + + IE Y+K G +D A RL++E+ G + N + ++ S A GK D A+++
Sbjct: 248 DNIYVCNATIEMYSKCGMIDVAKRLFEEL---GNQRNLCSWNSMIGSLATHGKHDEALTL 304
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG-LRPGMSTYTAILTLLA 504
F M + G P T+ LL G V +L+ SM + P + Y ++ LL
Sbjct: 305 FAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLG 364
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 5/245 (2%)
Query: 281 VDTQTYNALITLFLNKGLPY-KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
VD + +N ++ + N ++ I+ M + + +Y MI +K G L + +
Sbjct: 256 VDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLR 315
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
L+ EMK+R + P +++SLV + + D AMK+ ++ GL+P + Y S+I
Sbjct: 316 LYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
+AGKLD A + M P + +E + + + + M+ + PT
Sbjct: 376 EAGKLDVARNVLATMISENLSPTVDTFHAFLE----AVNFEKTLEVLGQMKISDLGPTEE 431
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
T+ +L Q ++A+K++ M + + Y A + L S ++ A +I EM
Sbjct: 432 TFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Query: 520 KAMGF 524
K+ GF
Sbjct: 492 KSKGF 496
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 107/242 (44%), Gaps = 4/242 (1%)
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
D+Y+ +I +K L + + +++ G + YN+L+ + + ++ ++ +
Sbjct: 295 DSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKK 354
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
+ DS TY MI L ++G+LDVA + M N+ P+ F + ++++
Sbjct: 355 LNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN---- 410
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
+ +++ +M+ L P+ + ++ K + + AL++W EM + N LY
Sbjct: 411 FEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLA 470
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++ G L+ A I+++M+ GF+ P L E + M L + G
Sbjct: 471 TIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQKVKGVRKSKRMNLQKVGSQEG 530
Query: 489 LR 490
+
Sbjct: 531 YK 532
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 9/240 (3%)
Query: 207 VPNEECYLLLFDALNQSRD-FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
PN++ Y + ++ + FD+++ L+DEM + GI + YN ++ L + + +
Sbjct: 291 TPNKDSYSHMISCFSKVGNLFDSLR-LYDEMKKRGLAPGI---EVYNSLVYVLTREDCFD 346
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
A KK+ G K D+ TYN++I G + + +M + S T+ +
Sbjct: 347 EAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFL 406
Query: 326 PSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLR 385
++ L+V +MK ++ P+ F ++ + K + + A+KI+ EM F +
Sbjct: 407 EAVNFEKTLEV----LGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIV 462
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
+ +Y + I+ G L+ A ++ EMK GF N L L+ E K + M++
Sbjct: 463 ANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQKVKGVRKSKRMNL 522
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 135/320 (42%), Gaps = 34/320 (10%)
Query: 224 RDFDAIQSLFDEM--VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV 281
R ++S D M ++DSS D + D++ +I L ++ LAF FK + G
Sbjct: 99 RQVSELESEADAMASLEDSSFD--LNHDSFYSLIWELR--DEWRLAFLAFKWGEKRGCD- 153
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE---LMIPSLAKSGRLDVAF 338
D ++ + +I + N ++ F I + ++ T + LM+ A + A
Sbjct: 154 DQKSCDLMIWVLGN----HQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAI 209
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYM--------EMRGFG--LRPSA 388
+ F M + P F L+ ++ + G ++ A + + ++ GF L
Sbjct: 210 RTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWC 269
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
++ + E A R+W EM PN Y+ ++ +K G L ++ ++++
Sbjct: 270 NIWTDVTE----------AKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDE 319
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
M+K G P Y+ L+ + D AMKL + GL+P TY +++ L
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 509 VDVAAKILLEMKAMGFSVDV 528
+DVA +L M + S V
Sbjct: 380 LDVARNVLATMISENLSPTV 399
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 139/341 (40%), Gaps = 3/341 (0%)
Query: 175 PNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFD 234
PN +L+ V D L Y+ ++ Y P E Y L+ + Q++ +D I+ +
Sbjct: 62 PN--EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVM- 118
Query: 235 EMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFL 294
++ + S YN + Y A ++ A + G ++++N ++ L +
Sbjct: 119 RTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLV 178
Query: 295 NKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFG 354
+ L + +I+ S +D+ ++I L +SG L+ A +L E ++ RP+
Sbjct: 179 SAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVM 238
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
FS L+ G+ + A K+ M + P + LI K G+++ + L + M
Sbjct: 239 TFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERM 298
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
K G PN G Y ++ + A + + M G P+ +Y ++ + V
Sbjct: 299 KVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
+ M N G P + ++ + SK D A +
Sbjct: 359 VEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQANL 399
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 6/255 (2%)
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSF-EIYESMEA----AQCSLDSST-YELMIPSL 328
Q + D Q +L L +NK K + EI E M +C Y LM
Sbjct: 83 QHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYG 142
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
+GR++ A ++ M + PS F+ +++ + A D KI++ G+ A
Sbjct: 143 NLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDA 202
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
LI+ ++G L+ AL+L DE + RPN ++ ++ GK + A +
Sbjct: 203 CCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLER 262
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
MEK P T++ L+ G+V+ + L M G P TY +L L KK
Sbjct: 263 MEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKR 322
Query: 509 VDVAAKILLEMKAMG 523
A +++ +M + G
Sbjct: 323 NLEAKEMMSQMISWG 337
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 97/191 (50%), Gaps = 1/191 (0%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D T ++ + SL ++GR+D A L +E+ E++ P ++ L+ + K L +
Sbjct: 158 DQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFV 217
Query: 377 MEMRG-FGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
EMR F ++P + LI++ + L A+ L ++ AGF+P+ LY I++
Sbjct: 218 DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
K A+ ++ M++ G P TY+ L+ + +G+V+ A +M +AG P +T
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 496 YTAILTLLASK 506
YT+++ + K
Sbjct: 338 YTSLMNGMCRK 348
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 113/262 (43%), Gaps = 7/262 (2%)
Query: 180 ILQALKIVNDIDASLSLYKWA-KRQSWYVPNEECYLLLFDALNQSRD--FDAIQSLFDEM 236
+LQ+ + ++ ++ L++ K Q + P +L+L ++ D + + + M
Sbjct: 91 VLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLM 150
Query: 237 VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNK 296
V + + + D ++ L + +++ A K++ DT TYN L+
Sbjct: 151 VNNGLEPDQVTTDI---AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 297 GLPYKSFEIYESM-EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI 355
+ +E + M + D ++ ++I ++ S L A L ++ +P +
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
+++++ + A+ +Y +M+ G+ P Y +LI +KAG+++ A M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 416 KAGFRPNYGLYTLIVESNAKSG 437
AG+ P+ YT ++ + G
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKG 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 115/311 (36%), Gaps = 40/311 (12%)
Query: 305 IYESMEA-AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM--KERNIRPSFGIFSSLVD 361
++ S+ A ++ LD + ++ S ++ KLFQ + + N RP F L+
Sbjct: 71 LFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLS 130
Query: 362 SMGKA--GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGF 419
+A + ++ M GL P + S + G++D A L E+ +
Sbjct: 131 HACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS 190
Query: 420 RPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCLLEMHAASGQVDSAM 478
P+ Y +++ K L ++M + P +++ L++ S + AM
Sbjct: 191 PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 479 KLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI 538
L + + NAG +P Y I+ GF S+ + VY
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMK---------------------GFCTLSKGSEAVGVYK 289
Query: 539 KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLV 598
K M G+ + L K G E A+ L+T V++ + D
Sbjct: 290 K-------------MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 599 LYTSILAHLVR 609
YTS++ + R
Sbjct: 337 TYTSLMNGMCR 347
>AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G27800.1); Has 13348 Blast hits to 4225
proteins in 143 species: Archae - 3; Bacteria - 6;
Metazoa - 114; Fungi - 126; Plants - 12736; Viruses - 0;
Other Eukaryotes - 363 (source: NCBI BLink). |
chr3:9180348-9181487 FORWARD
Length = 379
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 146/329 (44%), Gaps = 50/329 (15%)
Query: 163 ELETHLDKLQFLPNMTH--ILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDAL 220
+ ET + L+ P T+ ++ AL+ +D D +L +++W +Q Y N E Y +
Sbjct: 61 QFETWIQNLK--PGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQA 118
Query: 221 NQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGK 280
+ + +++L +E++ + + S YN +I+ FCC +K
Sbjct: 119 ITGKRNNFVETLIEEVIAGACE---MSVPLYNCIIR-----------FCCGRKF------ 158
Query: 281 VDTQTYNALITLFLNKGLPYKSFEIYESM-EAAQCSLDSSTYELMIPSLAKS-GRLDVAF 338
L ++F++Y M + D TY L++ SL K +L+V +
Sbjct: 159 -----------------LFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCY 201
Query: 339 -------KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
L ++MK + P + + ++ + K +D A++++ EM +G P+A Y
Sbjct: 202 VYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTY 261
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
+ L++ + G++ L + EM+ G PN Y +++ S + +LD A+ + DM
Sbjct: 262 SYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLA 321
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
P TY+ +L G+ A+++
Sbjct: 322 NSLSPDMLTYNTVLTELCRGGRGSEALEM 350
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 10/235 (4%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVD-SMGKAGRLDTAMKI 375
+ Y MI R + L +E+ S +++ ++ G+ + A +
Sbjct: 107 NHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDV 166
Query: 376 YMEM-RGFGLRPSATMYASLIESYTKA-GKLDT------ALR-LWDEMKKAGFRPNYGLY 426
Y +M R +P Y L+ S K KL+ A+R L +MK G P+ +
Sbjct: 167 YNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVL 226
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
+I+++ AK ++D A+ +F +M G P TYS L++ G+V + Y M
Sbjct: 227 NMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQV 286
Query: 487 AGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDG 541
G+ P S Y ++ L+ ++ +D A +++ +M A S D+ + ++ + G
Sbjct: 287 KGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRG 341
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 42/267 (15%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
NA+I F G K+ +++ ME D++T+ MI + + G A LF +M++
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLME----DRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL-- 404
+ +RPSF S++ L +++ + + + L+ Y K G+L
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 405 -----------------------------DTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
+ AL+++ EM +G PN I+ + +
Sbjct: 385 AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSY 444
Query: 436 SGKLDTAMSIFNDME-KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMS 494
+GKL+ + IF ME K PT YSC ++M +GQVD AM+L SMT ++P +
Sbjct: 445 AGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT---IKPDAT 501
Query: 495 TYTAILTLLASKK---LVDVAAKILLE 518
+ A+L + L +VAAK L E
Sbjct: 502 VWGALLGACKTHSRLDLAEVAAKKLFE 528
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 142/324 (43%), Gaps = 31/324 (9%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
++ + ++ G K+ ++Y+ M ++ MI L + GR+D A +F EM
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN----MIGGLCREGRVDEARLIFDEM 198
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT--MYASLIESYTKAG 402
+ERN+ +++++ + R+D A K+ F + P T + S++ YT +G
Sbjct: 199 RERNVVT----WTTMITGYRQNNRVDVARKL------FEVMPEKTEVSWTSMLLGYTLSG 248
Query: 403 KLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYS 462
+++ A ++ M +P +IV + G++ A +F+ ME +T+
Sbjct: 249 RIEDAEEFFEVMP---MKPVIACNAMIV-GFGEVGEISKARRVFDLMEDR----DNATWR 300
Query: 463 CLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAM 522
+++ + G A+ L+ M G+RP + +IL++ A+ + ++ +
Sbjct: 301 GMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 523 GFSVDVSASDVLM-VYIKDGS-VDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYES 580
F DV + VLM +Y+K G V L + RF I N+ I +GL E
Sbjct: 361 QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSII-----SGYASHGLGEE 415
Query: 581 AKPLLETYVNSAAKVDLVLYTSIL 604
A + +S + V +IL
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAIL 439
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 146/339 (43%), Gaps = 39/339 (11%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
++N++++ + + GLP ++ ++++ M + ++ ++ K+ + A +F+ M
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWNGLVSGYIKNRMIVEARNVFELM 105
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
ERN+ ++++V + G + A ++ M M+ LI+ G++
Sbjct: 106 PERNVVS----WTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD----GRI 157
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
D A +L+D M + T ++ + G++D A IF++M + + T++ +
Sbjct: 158 DKARKLYDMMPVKDVVAS----TNMIGGLCREGRVDEARLIFDEMRERNVV----TWTTM 209
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ + + +VD A KL+ M + +S + +L S ++ D A+ E+ M
Sbjct: 210 ITGYRQNNRVDVARKLFEVMPE---KTEVSWTSMLLGYTLSGRIED--AEEFFEVMPMKP 264
Query: 525 SVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIR------------QLFESC 572
+ +A +++ + + G + A R M+ T +I+ LF
Sbjct: 265 VIACNA--MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 573 MKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQ 611
K G+ S L+ A L + AHLVRCQ
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
>AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17870064-17871929 REVERSE
Length = 621
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 143/308 (46%), Gaps = 5/308 (1%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
YN ++ LA+ + + +++ +G +D TY + F + ++ ++YE M
Sbjct: 266 YNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMM 325
Query: 311 AA--QCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
+ S+ + L S + + LD+ F++ ++ + S ++ + S+ GR
Sbjct: 326 DGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGR 385
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
D A +I MR G P Y+ L+ KA +L+ A + D+M+ G P+ +T+
Sbjct: 386 FDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTI 445
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSA-MKLYNSMTNA 487
+++ + K+ +LD A++ F +M + GF + L++ + + A + L + NA
Sbjct: 446 LIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNA 505
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLAL 547
++P STY ++ L K + A +L MK + A D + K G+++ A
Sbjct: 506 NVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLA--KFGTLEDAK 563
Query: 548 RWLRFMDS 555
++L + S
Sbjct: 564 KFLDVLSS 571
>AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:172256-174137 FORWARD
Length = 577
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 101/200 (50%), Gaps = 21/200 (10%)
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
+++++D G+AGR+ + ++ M+ G+ Y SLI + +G +D A+RLW+EM+
Sbjct: 125 YTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMR 184
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
G P YT ++ G+++ A ++ +M ++ P TY+ L+E A+G+ +
Sbjct: 185 DNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCE 244
Query: 476 SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
A+ ++ M G++P D AA +L KA+ F + S ++
Sbjct: 245 EALDIFFKMQEIGVQP------------------DKAACNILIAKALKFG-ETSFMTRVL 285
Query: 536 VYIKDGSVDLALRWLRFMDS 555
VY+K+ V LR+ F+++
Sbjct: 286 VYMKENGV--VLRYPIFVEA 303
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 160/362 (44%), Gaps = 22/362 (6%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
NRV++ +K L F +++G K D TY ++ +F G + ++ M+
Sbjct: 93 NRVLKAHPPMQKAWLFFNWAAQIKGF--KHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKE 150
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
+D+ TY +I ++ SG +D A +L++EM++ P+ +++ + + GR++
Sbjct: 151 KGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEE 210
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
A ++Y EM + P+ Y L+E GK + AL ++ +M++ G +P+ +++
Sbjct: 211 ATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIA 270
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRP 491
K G+ + M++ G + + LE A+G+ D ++ NS
Sbjct: 271 KALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNS-------- 322
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLALRWL 550
+ ++ +L +S D+ E+ S D S VL++ +VD+ L +
Sbjct: 323 ----HISVESLCSS----DIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQM 374
Query: 551 RFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRC 610
R I+ ++F++ + E+ E A + + + Y +++ + +R
Sbjct: 375 R---DRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRS 431
Query: 611 QE 612
E
Sbjct: 432 NE 433
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y ++ +A +++ + F ++ G +DT TY +LI + G + ++E M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
C +Y + L GR++ A ++++EM + P+ ++ L++ + G+
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ A+ I+ +M+ G++P LI K G+ R+ MK+ G Y ++
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEA 303
Query: 430 VESNAKSGKLDTAMSIFN 447
+E+ +G+ D + N
Sbjct: 304 LETLKAAGESDDLLREVN 321
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 121/270 (44%), Gaps = 20/270 (7%)
Query: 148 VAKIVEVVKRWKWGPELETHLDKLQFLPNM-----THIL-QALKIVNDIDASLSLYKWAK 201
V+ I ++K W E LP++ +HI+ + LK + + + WA
Sbjct: 61 VSNIYNILKYSNWDSAQEQ-------LPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAA 113
Query: 202 RQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKA 261
+ + + Y + D ++ ++ S+F M + K + Y +I +++ +
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKE---KGVLIDTVTYTSLIHWVSSS 170
Query: 262 EKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTY 321
++ A +++++ +G + +Y A + + G ++ E+Y+ M ++ S + TY
Sbjct: 171 GDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTY 230
Query: 322 ELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD--TAMKIYMEM 379
+++ L +G+ + A +F +M+E ++P + L+ K G T + +YM+
Sbjct: 231 TVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKE 290
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALR 409
G LR ++ +E+ AG+ D LR
Sbjct: 291 NGVVLR--YPIFVEALETLKAAGESDDLLR 318
>AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:493683-495158 FORWARD
Length = 491
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D TY +I K ++ A+KL +M+E P +++++ +G G+ D A ++
Sbjct: 245 DVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVL 304
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
EM+ +G P Y + I ++ A +L A +L DEM K G PN Y L + +
Sbjct: 305 KEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLA 364
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
L + ++ M LP + L++M +VD AM+L+ M G
Sbjct: 365 NDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVS 424
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMG 523
+L LL V+ A K LLEM G
Sbjct: 425 DVLLDLLCDLAKVEEAEKCLLEMVEKG 451
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%)
Query: 274 VQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
++G G K D TYN+LI ++ K++++ + M + + D TY +I L G+
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
D A ++ +EMKE P +++ + + A RL A K+ EM GL P+AT Y
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+ A L + L+ M PN +++ + K+D AM ++ DM G
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
F LL++ +V+ A K M G RP ++ I L+
Sbjct: 417 FGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLM 466
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 4/243 (1%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
DT +NAL+ + + +Y S++ Q D T+ +++ S A F
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKH-QFQPDLQTFNILLSGWKSSE---EAEAFF 234
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+EMK + ++P ++SL+D K ++ A K+ +MR P Y ++I
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
G+ D A + EMK+ G P+ Y + + + +L A + ++M K G P +TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+ + + + + + +LY M P + ++ + + VD+A ++ +M
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 522 MGF 524
GF
Sbjct: 415 KGF 417
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 137/310 (44%), Gaps = 3/310 (0%)
Query: 319 STYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYME 378
+ YE + LA + + + ++ +E + G + +++ G+ G + A K++ E
Sbjct: 72 AVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDE 131
Query: 379 MRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK-KAGFRPNYGLYTLIVESNAKSG 437
M + +A + +L+ + + K D ++ E+ K P+ Y +++ G
Sbjct: 132 MPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKG 191
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
A+++ +++E G P T++ LL G+ + +++ M ++ + +Y
Sbjct: 192 SFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYN 251
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSS 556
A L LA + + + ++K DV + + ++ ++ +G +D A+ W + ++ +
Sbjct: 252 ARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 557 GIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNE 616
G R F+ L + K G ESA L + VD + ++ LV+ +Q+E
Sbjct: 312 GCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGS-KQDE 370
Query: 617 RHLMLILGAT 626
++ L T
Sbjct: 371 AEEIVELAKT 380
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 131/296 (44%), Gaps = 12/296 (4%)
Query: 156 KRWKWGPELETHLDKLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEEC--- 212
K+++W E+ L++ PNM+ +I+N + + +++ A++ +P C
Sbjct: 85 KKFEWVEEI---LEEQNKYPNMSKEGFVARIIN-LYGRVGMFENAQKVFDEMPERNCKRT 140
Query: 213 ---YLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFC 269
+ L +A S+ FD ++ +F E+ S + +YN +I+ L A
Sbjct: 141 ALSFNALLNACVNSKKFDLVEGIFKELPGKLSIE--PDVASYNTLIKGLCGKGSFTEAVA 198
Query: 270 CFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLA 329
+++ G K D T+N L+ KG + +I+ M D +Y + LA
Sbjct: 199 LIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLA 258
Query: 330 KSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
+ + LF ++K ++P F++++ G+LD A+ Y E+ G RP
Sbjct: 259 MENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKF 318
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
++ SL+ + KAG L++A L E+ + + +V++ K K D A I
Sbjct: 319 VFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 226 FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGS-GGKVDTQ 284
F+ Q +FDEM + + K SF+A ++ ++K +L FK++ G + D
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNA---LLNACVNSKKFDLVEGIFKELPGKLSIEPDVA 178
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
+YN LI KG ++ + + +E D T+ +++ G+ + +++ M
Sbjct: 179 SYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM 238
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
E+N++ +++ + + + + + ++ +++G L+P + ++I+ + GKL
Sbjct: 239 VEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKL 298
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
D A+ + E++K G RP ++ ++ + K+G L++A + ++
Sbjct: 299 DEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 150/336 (44%), Gaps = 10/336 (2%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQ-DSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKV 274
L +N RD I F + Q + + I+ Y R ++ LA A+K E ++
Sbjct: 41 LITLVNDERDPKFITEKFKKACQAEWFRKNIA---VYERTVRRLAAAKKFEWVEEILEE- 96
Query: 275 QGSGGKVDTQTYNA-LITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGR 333
Q + + + A +I L+ G+ + ++++ M C + ++ ++ + S +
Sbjct: 97 QNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKK 156
Query: 334 LDVAFKLFQEMKER-NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
D+ +F+E+ + +I P +++L+ + G A+ + E+ GL+P +
Sbjct: 157 FDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFN 216
Query: 393 SLI-ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
L+ ESYTK GK + ++W M + + + Y + A K + +S+F+ ++
Sbjct: 217 ILLHESYTK-GKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKG 275
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
P T++ +++ + G++D A+ Y + G RP + ++L + ++
Sbjct: 276 NELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLES 335
Query: 512 AAKILLEMKAMGFSVDVSA-SDVLMVYIKDGSVDLA 546
A ++ E+ A VD + +V+ +K D A
Sbjct: 336 AYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 125/291 (42%), Gaps = 16/291 (5%)
Query: 197 YKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQ--DSSKDGISSFDAYNRV 254
+K A + W+ N Y L ++ F+ ++ + +E + + SK+G + R+
Sbjct: 58 FKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVA-----RI 112
Query: 255 IQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM----- 309
I + E A F ++ K ++NAL LN + K F++ E +
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTALSFNAL----LNACVNSKKFDLVEGIFKELP 168
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
D ++Y +I L G A L E++ + ++P F+ L+ G+
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ +I+ M ++ Y + + K + + L+D++K +P+ +T +
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
++ GKLD A++ + ++EK G P ++ LL +G ++SA +L
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 138/315 (43%), Gaps = 2/315 (0%)
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
E+ + + + Y+ + L + RL ++ +E K+ G + ++ GKAG
Sbjct: 66 ESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMF 125
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK-KAGFRPNYGLYTL 428
+ A K++ EM + S + +L+ +Y + K D L++E+ K +P+ Y
Sbjct: 126 ENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNT 185
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
++++ + L A+++ +++E G P T++ LL GQ + +++ M
Sbjct: 186 LIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKN 245
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLAL 547
+ + TY A L LA++ + E+KA G DV S + ++ I +G +D A
Sbjct: 246 VAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAE 305
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
W + + G R + L + K G +ESA L + + V ++ L
Sbjct: 306 AWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDEL 365
Query: 608 VRCQEEQNERHLMLI 622
V+ + + ++ I
Sbjct: 366 VKGSKREEAEEIVKI 380
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 18/271 (6%)
Query: 196 LYKWAKRQSWYVPNEECY--LLLFDAL----NQSRDFDAIQSLFDEMVQD-SSKDGISSF 248
+++ A++ +PN +C +L F+AL S+ FD ++ LF+E+ S K I S
Sbjct: 124 MFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVS- 182
Query: 249 DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYES 308
YN +I+ L + + L A +++ G K D T+N L+ KG EI+
Sbjct: 183 --YNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 309 MEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
M ++D TY + LA + LF E+K ++P F++++ G+
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY--GLY 426
+D A Y E+ G RP +A L+ + KAG ++A+ L+ E F Y G
Sbjct: 301 MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKET----FSKRYLVGQT 356
Query: 427 TL--IVESNAKSGKLDTAMSIFNDMEKAGFL 455
TL +V+ K K + A I + FL
Sbjct: 357 TLQQLVDELVKGSKREEAEEIVKIAKTNDFL 387
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 114/242 (47%), Gaps = 4/242 (1%)
Query: 226 FDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGS-GGKVDTQ 284
F+ Q +F+EM K + SF+A ++ ++K ++ F ++ G K D
Sbjct: 125 FENAQKVFEEMPNRDCKRSVLSFNA---LLSAYRLSKKFDVVEELFNELPGKLSIKPDIV 181
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
+YN LI K ++ + + +E D T+ ++ S G+ ++ +++ +M
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKM 241
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
E+N+ +++ + + + + ++ E++ GL+P + ++I GK+
Sbjct: 242 VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKM 301
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
D A + E+ K G+RP+ + L++ + K+G ++A+ +F + +L +T L
Sbjct: 302 DEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQL 361
Query: 465 LE 466
++
Sbjct: 362 VD 363
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 129/284 (45%), Gaps = 14/284 (4%)
Query: 238 QDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKG 297
+D SK+G ++ R+I KA E A F+++ K ++NAL++ +
Sbjct: 104 RDMSKEGFAA-----RIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYR--- 155
Query: 298 LPYKSFEIYESM---EAAQCSL--DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPS 352
K F++ E + + S+ D +Y +I +L + L A L E++ + ++P
Sbjct: 156 -LSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 353 FGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
F++L+ S G+ + +I+ +M + Y + + K + L+
Sbjct: 215 IVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASG 472
E+K +G +P+ + ++ + GK+D A + + ++ K G+ P +T++ LL +G
Sbjct: 275 ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
Query: 473 QVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
+SA++L+ + G +T ++ L + A +I+
Sbjct: 335 DFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNA-LITLFLNKGLPYKSFEIYESM 309
Y+R ++ L A++L ++ Q + + + A +I+L+ G+ + +++E M
Sbjct: 77 YDRTVRRLVAAKRLHYVEEILEE-QKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEM 135
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER-NIRPSFGIFSSLVDSMGKAGR 368
C ++ ++ + S + DV +LF E+ + +I+P +++L+ ++ +
Sbjct: 136 PNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDS 195
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
L A+ + E+ GL+P + +L+ S G+ + +W +M + + Y
Sbjct: 196 LPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNA 255
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
+ A K +++F +++ +G P +++ ++ G++D A Y + G
Sbjct: 256 RLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHG 315
Query: 489 LRPGMSTYTAIL 500
RP +T+ +L
Sbjct: 316 YRPDKATFALLL 327
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 268 FCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPS 327
+CCF + D+ ++N ++T L P + +++ M ++C D T ++
Sbjct: 423 YCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRG 482
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+ L + ++ + + P I + L+D K G L A +I+ M
Sbjct: 483 CVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD----NRD 538
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+++LI Y ++G + AL L+ EMK AG PN+ + ++ + + G ++ + ++
Sbjct: 539 VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA 598
Query: 448 DME-KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASK 506
M+ + G PT SC++++ A +G+++ A + + M L P + + +L+ ++
Sbjct: 599 TMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMK---LEPDVVVWKTLLSACKTQ 655
Query: 507 KLVDVAAK 514
V +A K
Sbjct: 656 GNVHLAQK 663
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
N LI ++ G ++ I++SM+ + D ++ +I A+SG + A LF+EMK
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMD----NRDVVSWSTLIVGYAQSGFGEEALILFKEMKS 567
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG-FGLRPSATMYASLIESYTKAGKLD 405
I P+ F ++ + G ++ +K+Y M+ G+ P+ + +++ +AG+L+
Sbjct: 568 AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLN 627
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A R DEMK P+ ++ ++ + G + A ++ K P ST LL
Sbjct: 628 EAERFIDEMK---LEPDVVVWKTLLSACKTQGNVHLAQKAAENILKID--PFNSTAHVLL 682
Query: 466 -EMHAASGQVDSAMKLYNSMTNAGLR--PGMS 494
MHA+SG ++A L +SM ++ PG S
Sbjct: 683 CSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 8/179 (4%)
Query: 328 LAKSGRLDVAFKLFQEMKER----NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
+A +L F+ +KE P+ IF S + + R D +I+
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
L +A SL + Y + G L++A R++D+++ RP+ + +I+ A +G D A+
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIE----RPDTASWNVIIAGLANNGYADEAV 356
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTL 502
S+F+ M +GF+P + LL + M++++ + G ++ ++LT+
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
K G P + +++ AK G L A IF+ M+ + ++S L+ +A SG +
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVV----SWSTLIVGYAQSGFGE 556
Query: 476 SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA-MGFS-VDVSASDV 533
A+ L+ M +AG+ P T+ +LT + LV+ K+ M+ G S S V
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616
Query: 534 LMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYV---- 589
+ + + G ++ A RF+D + + + + L +C G A+ E +
Sbjct: 617 VDLLARAGRLNEA---ERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 590 -NSAAKVDLV 598
NS A V L
Sbjct: 674 FNSTAHVLLC 683
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 158/343 (46%), Gaps = 25/343 (7%)
Query: 235 EMVQDSSKDGIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLF 293
E+V++ K+GIS +N +I + K + A +K++ G D T+ A+I+
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 294 LNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSF 353
++ G+ Y++ +++ M A ++ T ++ +++ L V + Q + +I
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVT---IMSAVSACSCLKV---INQGSEVHSIAVKM 381
Query: 354 G------IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA 407
G + +SLVD K G+L+ A K++ ++ + S+I Y +AG A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKA 437
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP-TPSTYSCLLE 466
L+ M+ A RPN + ++ K+G AM +F MEK G + +T++ ++
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 467 MHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL----TLLASKKLVDVAAKILLEMKAM 522
+ +G+ D A++L+ M + P T ++L LL +K + ++ +L
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 523 GFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFII 565
+V + +D Y K G ++ + M++ I T N +I
Sbjct: 558 IHAVKNALTD---TYAKSGDIEYSRTIFLGMETKDIITWNSLI 597
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 127/293 (43%), Gaps = 51/293 (17%)
Query: 237 VQDSSK--DGISSFDAY--NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITL 292
++D+ K D + + D Y N +I +A A+ F ++Q + + + T+N +I+
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 293 FLNKGLPYKSFEIYESMEA-AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK------ 345
++ G ++ ++++ ME + +++T+ L+I ++G+ D A +LF++M+
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 346 -----------------------------ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
RN+ + ++L D+ K+G ++ + I+
Sbjct: 523 NSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF 582
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+ M + SLI Y G AL L+++MK G PN G + I+ ++
Sbjct: 583 LGME----TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM 638
Query: 437 GKLDTAMSIF----NDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
G +D +F ND +P S ++ ++ + +++ A++ M
Sbjct: 639 GNVDEGKKVFYSIANDYH---IIPALEHCSAMVYLYGRANRLEEALQFIQEMN 688
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+ +S++ K G LD A K + MR + S++ +Y + GK + A+ L EM
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVKEM 273
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
+K G P + +++ + GK D AM + ME G T++ ++ +G
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVL 534
A+ ++ M AG+ P T + ++ + K+++ +++ MGF DV + L
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 535 M-VYIKDGSVDLALRWLRFMDSSGIRTNNFII 565
+ +Y K G ++ A + + + + T N +I
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNKDVYTWNSMI 425
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 9/245 (3%)
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
AK G + A K+F M+ERN+ +S+++ + + R K++ M G+ P
Sbjct: 126 AKCGCIADARKVFDSMRERNLFT----WSAMIGAYSRENRWREVAKLFRLMMKDGVLPDD 181
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
++ +++ G ++ + + K G + I+ AK G+LD A F
Sbjct: 182 FLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRR 241
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
M + + ++ +L + +G+ + A++L M G+ PG+ T+ ++
Sbjct: 242 MRERDVI----AWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 509 VDVAAKILLEMKAMGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQ 567
D A ++ +M+ G + DV + + ++ I +G AL R M +G+ N I
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 568 LFESC 572
+C
Sbjct: 358 AVSAC 362
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 102/201 (50%), Gaps = 5/201 (2%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
++ MI + +G A ++F+EMK+ +IRP++ S++ ++ + G L+ +++
Sbjct: 241 SWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA 300
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
G+R + ++LI+ Y+K G ++ A+ +++ + R N ++ ++ A G+
Sbjct: 301 EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP----RENVITWSAMINGFAIHGQA 356
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA-GLRPGMSTYTA 498
A+ F M +AG P+ Y LL + G V+ + ++ M + GL P + Y
Sbjct: 357 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC 416
Query: 499 ILTLLASKKLVDVAAKILLEM 519
++ LL L+D A + +L M
Sbjct: 417 MVDLLGRSGLLDEAEEFILNM 437
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
++N +I+ + G + E++ M+ + T ++P++++ G L++ L
Sbjct: 241 SWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA 300
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
++ IR + S+L+D K G ++ A+ ++ + R + ++++I + G+
Sbjct: 301 EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP----RENVITWSAMINGFAIHGQA 356
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA-GFLPTPSTYSC 463
A+ + +M++AG RP+ Y ++ + + G ++ F+ M G P Y C
Sbjct: 357 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC 416
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA---AKILLEM 519
++++ SG +D A + + N ++P + A+L + V++ A IL++M
Sbjct: 417 MVDLLGRSGLLDEAEEF---ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM 472
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 104/245 (42%), Gaps = 13/245 (5%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
V+ +++ LEL + SG ++D +ALI ++ G+ K+ ++E +
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE- 338
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
+ T+ MI A G+ A F +M++ +RPS + +L+ + G ++
Sbjct: 339 ---NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 374 KIYMEMRGF-GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
+ + +M GL P Y +++ ++G LD A M +P+ ++ ++ +
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---IKPDDVIWKALLGA 452
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPS-TYSCLLEMHAASGQVDSAMKLYNSMTNAGLR- 490
G ++ + N + +P S Y L M+A+ G ++ M +R
Sbjct: 453 CRMQGNVEMGKRVANIL--MDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510
Query: 491 -PGMS 494
PG S
Sbjct: 511 DPGCS 515
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 111/257 (43%), Gaps = 21/257 (8%)
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+++ ++D + G A ++ +MR + S + ++I Y+ G A+ ++ EM
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMR----QRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
KK RPNY ++ + ++ G L+ + E +G S L++M++ G +
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 475 DSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS-VDVSASDV 533
+ A+ ++ + R + T++A++ A A +M+ G DV+ ++
Sbjct: 326 EKAIHVFERLP----RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381
Query: 534 LMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCM-----KNGLYESAKPLLETY 588
L G V+ R+ M + + R CM ++GL + A+ E
Sbjct: 382 LTACSHGGLVEEGRRYFSQM----VSVDGLEPRIEHYGCMVDLLGRSGLLDEAE---EFI 434
Query: 589 VNSAAKVDLVLYTSILA 605
+N K D V++ ++L
Sbjct: 435 LNMPIKPDDVIWKALLG 451
>AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) |
chr3:1956658-1958240 REVERSE
Length = 486
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 146/355 (41%), Gaps = 6/355 (1%)
Query: 193 SLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYN 252
+L ++ + Q++Y P E Y+ L L +S + Q LFDEM+++ + + + Y
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE---PTVELYT 163
Query: 253 RVIQYLAKAEKLELAFCCFKKVQG-SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
++ ++ ++ AF K++ + D TY+ L+ ++ +Y+ M+
Sbjct: 164 ALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDE 223
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLD 370
+ ++ T +++ + GR D K+ +M +P + ++ G G++D
Sbjct: 224 RLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID 283
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
Y + R FG+ P + LI SY K D + + M+K F Y I+
Sbjct: 284 MMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNII 343
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
E+ A G F+ M G T+ CL+ +A +G + +
Sbjct: 344 EAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIP 403
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVD 544
+ Y A+++ A + ++ + MK D ++++ Y K+G D
Sbjct: 404 ENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMND 458
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMS 444
+P Y L+ K+G+ + A +L+DEM + G P LYT ++ + +S +D A S
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 445 IFNDMEK-AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
I + M+ P TYS LL+ + Q D LY M + P T +L+
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240
Query: 504 ASKKLVDVAAKILLEM-KAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTN 561
D K+L +M + DV ++++ V+ G +D+ W + GI
Sbjct: 241 GRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPE 300
Query: 562 NFIIRQLFESCMKNGLYESAKPLLE 586
L S K +Y+ ++E
Sbjct: 301 TRTFNILIGSYGKKRMYDKMSSVME 325
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 113/281 (40%), Gaps = 12/281 (4%)
Query: 168 LDKLQFLPNM-------THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDAL 220
LDK++ P + +L+A + D SLYK + PN ++
Sbjct: 182 LDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYK-EMDERLITPNTVTQNIVLSGY 240
Query: 221 NQSRDFDAIQSLFDEM-VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGG 279
+ FD ++ + +M V + K + + N ++ K+++ ++K + G
Sbjct: 241 GRVGRFDQMEKVLSDMLVSTACKPDVWTM---NIILSVFGNMGKIDMMESWYEKFRNFGI 297
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
+ +T+T+N LI + K + K + E M + +STY +I + A G
Sbjct: 298 EPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEL 357
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
F +M+ ++ F L++ AG + F + + Y ++I +
Sbjct: 358 TFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACA 417
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLD 440
KA L R++ MK+ + + ++VE+ K G D
Sbjct: 418 KADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMND 458
>AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL
FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040
FORWARD
Length = 778
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 5/218 (2%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMK---ERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
DS Y ++ K+GR+ ++ + M+ +RN P ++++V + AG +D A
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM-KKAGFRPNYGLYTLIVES 432
++ EM G+ + Y L++ Y K ++D A L EM + AG P+ Y +I++
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN-AGLRP 491
A++ FN+M G PT +Y+ L++ A SGQ A ++++ M N ++
Sbjct: 533 CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKV 592
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVS 529
+ + ++ L++ A +++ MK GF +V+
Sbjct: 593 DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVA 630
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D TY +++ F+N GL ++ ++ M + TY +++ K ++D A L
Sbjct: 451 DEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL 510
Query: 342 QEMKER-NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
+EM E I P ++ ++D A+ + EMR G+ P+ Y +L++++
Sbjct: 511 REMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAM 570
Query: 401 AGKLDTALRLWDEM-KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
+G+ A R++DEM + + + ++VE + G ++ A + + M++ GF P +
Sbjct: 571 SGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVA 630
Query: 460 TYSCL 464
TY L
Sbjct: 631 TYGSL 635
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 124/309 (40%), Gaps = 51/309 (16%)
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
Q D++ + ++ + A G D +KLF+EM E + P ++ ++ + GR +
Sbjct: 230 GQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKEL 289
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
+ + + G++ T SL+ +Y G L TA R+ M++ L ++ E
Sbjct: 290 IVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREK----RRDLCKVLRE 345
Query: 432 SN---------------------------------AKSGKLDTAMSIF-NDMEKAG---- 453
N ++ G +D + N ++ +G
Sbjct: 346 CNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPL 405
Query: 454 ----FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR---PGMSTYTAILTLLASK 506
F P Y+ L++ + +G+V ++ +M R P TYT +++ +
Sbjct: 406 LPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNA 465
Query: 507 KLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFM-DSSGIRTNNFI 564
L+D A ++L EM MG + +VL+ Y K +D A LR M + +GI +
Sbjct: 466 GLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVS 525
Query: 565 IRQLFESCM 573
+ + C+
Sbjct: 526 YNIIIDGCI 534
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 121/285 (42%), Gaps = 27/285 (9%)
Query: 208 PNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD-AYNRVIQYLAKAEKLEL 266
P+E Y + A + D + + EM ++ G+ + YN +++ K +++
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEM----ARMGVPANRITYNVLLKGYCKQLQIDR 505
Query: 267 AFCCFKKV-QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMI 325
A +++ + +G + D +YN +I + + + M + +Y ++
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 326 PSLAKSGRLDVAFKLFQEM-KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL 384
+ A SG+ +A ++F EM + ++ ++ LV+ + G ++ A ++ M+ G
Sbjct: 566 KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 385 RPSATMYASLIESYTKAGKLDTALRLWDEMKKAG-------------------FRPNYGL 425
P+ Y SL ++A K AL LW E+K+ +P+ GL
Sbjct: 626 YPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGL 685
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL-LEMHA 469
+ + ++ A+ I ME+ G P + Y + +EMH+
Sbjct: 686 LDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHS 730
>AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3913168-3914385 REVERSE
Length = 405
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 124/303 (40%), Gaps = 3/303 (0%)
Query: 219 ALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSG 278
L + + F A+ L D +Q+ SF R I +A L+ + F+ ++
Sbjct: 84 TLAREKHFVAVSQLLDGFIQNQPDPKSESFAV--RAIILYGRANMLDRSIQTFRNLEQYE 141
Query: 279 GKVDTQTYNALITLFLNKGLPYKSFEIYESM-EAAQCSLDSSTYELMIPSLAKSGRLDVA 337
++ NAL+ L ++ +Y M + D TY MI L +SG +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
+ + EM+ + I+P+ F ++D K + D K+ M FG+ Y +I+
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
K K A L D + RPN Y+L++ LD AM++F M G+ P
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
Y L+ G ++A+ L P S ++ LAS+ VD A +++
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA 381
Query: 518 EMK 520
+K
Sbjct: 382 VVK 384
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 99/225 (44%), Gaps = 2/225 (0%)
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM-RGFGLRPS 387
++ LD + + F+ +++ I + ++L+ + A A ++Y+EM + +G+ P
Sbjct: 122 GRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPD 181
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
Y +I ++G ++ + EM++ +P + L+++ K K D +
Sbjct: 182 LETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMR 241
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M++ G +TY+ +++ + A L + + + +RP TY+ ++ S++
Sbjct: 242 MMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEE 301
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLR 551
+D A + M G+ D L+ K G + AL R
Sbjct: 302 NLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCR 346
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
TY MI K R+D A ++ M + P FS+L++ KA R+D M+I+ EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
G+ + Y +LI + + G LD A L +EM G P+Y + ++ +L
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 440 DTAMSIFNDMEKA 452
A +I D++K+
Sbjct: 132 RKAFAILEDLQKS 144
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%)
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P+ Y S+I+ + K ++D A R+ D M G P+ ++ ++ K+ ++D M I
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
F +M + G + TY+ L+ G +D+A L N M + G+ P T+ +L L S
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 506 KKLVDVAAKILLEMK 520
KK + A IL +++
Sbjct: 128 KKELRKAFAILEDLQ 142
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA 407
+I P+ ++S++D K R+D A ++ M G P +++LI Y KA ++D
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
+ ++ EM + G N YT ++ + G LD A + N+M G P T+ C+L
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%)
Query: 283 TQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQ 342
T TYN++I F + + + +SM + CS D T+ +I K+ R+D ++F
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 343 EMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAG 402
EM R I + +++L+ + G LD A + EM G+ P + ++
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 403 KLDTALRLWDEMKKA 417
+L A + ++++K+
Sbjct: 130 ELRKAFAILEDLQKS 144
>AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6951349-6952845 REVERSE
Length = 498
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G + +YN L+ + +GL ++ +++E M+ D Y MI L + + A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
+LF++M + I + + LV+ KAG +D+ + +Y EM+ G +L+E
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 398 YT--KAGK--LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+ G+ ++ A + D +++A F P+ Y L+V+ + GK+D A++I +M G
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
F P+ TY ++ + G +++ L M +
Sbjct: 456 FKPSQETYRAFIDGYGIVGDEETSALLAIEMAES 489
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 145/329 (44%), Gaps = 29/329 (8%)
Query: 225 DFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQ 284
D D + +F +++ ++ G + F ++ +I+ +++++ A +K++ G
Sbjct: 140 DEDRVLKVFRSLIKSYNRCGSAPF-VFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQIS 198
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
T NALIT + +++Y + LD + +D A K+ +
Sbjct: 199 TCNALITEVSRRRGASNGYKMYREVFG----LDDVS-------------VDEAKKMIGK- 240
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG-FGLRPSATMYASLIESYTKAGK 403
I+P+ F+S++ S + G + +I+ EM G P+ Y L+E+Y G
Sbjct: 241 ----IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGL 296
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
+ A ++W+EMK G + Y ++ + ++ A +F DM G T TY
Sbjct: 297 MSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEH 356
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA----SKKLVDVAAKILLEM 519
L+ + +G VDS + +Y M G T A++ L +++V+ A + +
Sbjct: 357 LVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAV 416
Query: 520 KAMGFSVDVSASDVLMVYI-KDGSVDLAL 547
+ F + ++L+ + +DG +D AL
Sbjct: 417 REAMFYPSRNCYELLVKRLCEDGKMDRAL 445
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 117/241 (48%), Gaps = 9/241 (3%)
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
KVD YN L+ L++ GL + ++++ M + T+ +I L+K R+ F
Sbjct: 268 KVDQVVYNVLLKLYMESGLFDDARKVFDGMSER----NVVTWNSLISVLSKKVRVHEMFN 323
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYT 399
LF++M+E I S+ ++++ + + L T +I+ ++ +P + SL++ Y
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 383
Query: 400 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
K G+++ + R++D M + + +++ A +G ++ +++F M ++G P
Sbjct: 384 KCGEVEYSRRVFDVM----LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSM-TNAGLRPGMSTYTAILTLLASKKLVDVAAKILLE 518
T+ LL + +G + + L+ M T + P + Y ++ +L + A K++
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Query: 519 M 519
M
Sbjct: 500 M 500
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 123/254 (48%), Gaps = 13/254 (5%)
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
+KV + + T+N+LI++ K ++ F ++ M+ +T ++P+ ++
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
L ++ ++ + +P + +SL+D GK G ++ + +++ M L +
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM----LTKDLASW 406
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
++ Y G ++ + L++ M ++G P+ + ++ + +G + +S+F M K
Sbjct: 407 NIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM-K 465
Query: 452 AGFLPTPST--YSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT---LLASK 506
F +P+ Y+CL+++ +G++ A+K+ +M +P S + ++L L +
Sbjct: 466 TEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMP---FKPSASIWGSLLNSCRLHGNV 522
Query: 507 KLVDVAAKILLEMK 520
+ ++AAK L ++
Sbjct: 523 SVGEIAAKELFVLE 536
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 135/306 (44%), Gaps = 42/306 (13%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D +Y ALI + ++G + ++++ + D ++ MI A++G A +LF
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELF 254
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
++M + N+RP ++V + ++G ++ ++++ + G + + +LI+ Y+K
Sbjct: 255 KDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC 314
Query: 402 GKLDT-------------------------------ALRLWDEMKKAGFRPNYGLYTLIV 430
G+L+T AL L+ EM ++G PN I+
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 431 ESNAKSGKLDTA--MSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
+ A G +D + ++ D G S + L++M+A G +++A +++NS+
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI---- 430
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSV-DVSASDVLMVYIKDGSVDLAL 547
L +S++ A++ A D + + M+ +G D++ +L G +DL
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 548 RWLRFM 553
R M
Sbjct: 491 HIFRTM 496
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 117/252 (46%), Gaps = 14/252 (5%)
Query: 296 KGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI 355
+GLPY + ++++++ + + M A S A KL+ M + P+
Sbjct: 82 EGLPY-AISVFKTIQEPNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136
Query: 356 FSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
F ++ S K+ +I+ + G ++ SLI Y + G+L+ A +++D
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD--- 193
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
K+ R + YT +++ A G ++ A +F+++ + +++ ++ +A +G
Sbjct: 194 KSPHR-DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV----SWNAMISGYAETGNYK 248
Query: 476 SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM 535
A++L+ M +RP ST +++ A +++ ++ L + GF ++ + L+
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 536 -VYIKDGSVDLA 546
+Y K G ++ A
Sbjct: 309 DLYSKCGELETA 320
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 156/381 (40%), Gaps = 38/381 (9%)
Query: 177 MTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLL-LFDALNQSRDFDAIQSLFDE 235
++ + A + ++ L+ WA R S V + EC L+ ++ + D + +FD
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIR-SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 236 MVQDSS------------KDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
M +D S K+ + +A N + + + F + G D
Sbjct: 331 M-EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 284 QTYNALITLFLNKGLPYKS---------FEIYESMEAAQCSLDS------STYELMIPSL 328
+ ++ +GL S F + ME AQ + +S +Y +
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
++ + AFKL E+ ER + S F+SL+ + G + +I+ ++ GL +
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
+ +LI Y+K G +DTA R+++ M+ N +T ++ AK G + FN
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMEN----RNVISWTSMITGFAKHGFAIRVLETFNQ 565
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM-TNAGLRPGMSTYTAILTLLASKK 507
M + G P TY +L + G V + +NSM + ++P M Y ++ LL
Sbjct: 566 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625
Query: 508 LVDVAAKILLEMKAMGFSVDV 528
L+ A + + M F DV
Sbjct: 626 LLTDAFEFI---NTMPFQADV 643
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 7/214 (3%)
Query: 316 LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI 375
+DS T+ ++ S ++ + + + E +I P +++SL+ K+G A +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 376 YMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
+ MR FG R + +++++ Y G+ A++++ E + G PN YT ++ + +
Sbjct: 120 FETMRRFGKRDVVS-WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSC-LLEMHA-ASGQVDSAMKLYNSMTNAGLRPGM 493
S + + K G + C L++M ++A K+++ M+ +
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV---- 234
Query: 494 STYTAILTLLASKKLVDVAAKILLEMKAMGFSVD 527
T+T ++T A + L+M GF D
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 118/250 (47%), Gaps = 12/250 (4%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSL-DSSTYELMIPSLAKSGRLDVAFKL 340
D +NAL+ + G ++ + E M C + + ++ +I AKSGR A ++
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMP---CWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
FQ M N+ P +++ + G L+ +I + G+ + ++ ++I+ Y K
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
+G + AL +++ + + N +T I+ A G A+++FN M KAG P T
Sbjct: 298 SGNITKALDVFECVNE----RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 461 YSCLLEMHAASGQVDSAMKLYNSM-TNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
+ +L + G VD +L+NSM + G+ P + Y ++ LL + A +++
Sbjct: 354 FIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI--- 410
Query: 520 KAMGFSVDVS 529
K+M F + +
Sbjct: 411 KSMPFKANAA 420
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
+I+ ++ FG S + LI+ Y G L A +++DEM + ++ ++
Sbjct: 137 QIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM----LVKDVNVWNALLAGY 192
Query: 434 AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
K G++D A S+ M ++ +++C++ +A SG+ A++++ M + P
Sbjct: 193 GKVGEMDEARSLLEMM--PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDE 250
Query: 494 STYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASD-VLMVYIKDGSVDLALRWLRF 552
T A+L+ A +++ +I + G + VS ++ V+ +Y K G++ AL
Sbjct: 251 VTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFEC 310
Query: 553 MDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILA 605
++ + T II L +G A + V + + + V + +IL+
Sbjct: 311 VNERNVVTWTTIIAGL----ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILS 359
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 23/294 (7%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
L D + R+ ++ ++L + M D D +S +N +I + + A F ++
Sbjct: 268 LIDMYAKCREMESARALLEGMEVD---DVVS----WNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL----AKS 331
K+D T +++ F L +I S +TY+L+ +L AK
Sbjct: 321 ERDMKIDDFTIPSILNCF---ALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKR 377
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
G +D A K+F+ M E+++ +++LV G D A+K++ MR G+ P +
Sbjct: 378 GIMDSALKVFEGMIEKDVIS----WTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
AS++ + + L+ ++ K+GF + + +V K G L+ A IFN ME
Sbjct: 434 ASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEI 493
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM-TNAGLRPGMSTYTAILTLLA 504
+ T++CL+ +A +G ++ A + ++SM T G+ PG Y ++ L
Sbjct: 494 RDLI----TWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFG 543
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 22/278 (7%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
NAL+ ++ +G+ + +++E M D ++ ++ +G D A KLF M+
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGM----IEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
I P + +S++ + + L+ +++ G S ++ SL+ YTK G L+
Sbjct: 424 GGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLED 483
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA-GFLPTPSTYSCLL 465
A +++ M+ +T ++ AK+G L+ A F+ M G P P Y+C++
Sbjct: 484 ANVIFNSMEIRDLIT----WTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMI 539
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV-----AAKILLEMK 520
++ SG +L + M + P + + AIL AS+K ++ AAK L+E++
Sbjct: 540 DLFGRSGDFVKVEQLLHQME---VEPDATVWKAILA--ASRKHGNIENGERAAKTLMELE 594
Query: 521 AMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGI 558
V S+ +Y G D A R M S I
Sbjct: 595 PNNAVPYVQLSN---MYSAAGRQDEAANVRRLMKSRNI 629
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 23/315 (7%)
Query: 298 LPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFS 357
LP K F A + L S+ L++ L+KSGR+D A ++F +M ER+ F ++
Sbjct: 11 LPLKPFGSCIHSYADRTKLHSN---LLLGDLSKSGRVDEARQMFDKMPERD---EF-TWN 63
Query: 358 SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA 417
+++ + + RL A K++ R ++ + + + +LI Y K+G A L+ EM+
Sbjct: 64 TMIVAYSNSRRLSDAEKLF---RSNPVKNTIS-WNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 418 GFRPNYGLYTL--IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
G +PN YTL ++ L I K GF + + LL M+A ++
Sbjct: 120 GIKPNE--YTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 476 SAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF-SVDVSASDVL 534
A L+ +M T+T++LT + A + +++ G S + VL
Sbjct: 178 EAEYLFETMEG---EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVL 234
Query: 535 MVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAK 594
+ + ++ + SG +TN ++ L + K ESA+ LLE
Sbjct: 235 TACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLE----GMEV 290
Query: 595 VDLVLYTSILAHLVR 609
D+V + S++ VR
Sbjct: 291 DDVVSWNSMIVGCVR 305
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 12/289 (4%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D T+ MI + + S RL A KLF+ +N +++L+ K+G A ++
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTIS----WNALISGYCKSGSKVEAFNLF 113
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
EM+ G++P+ S++ T L ++ K GF + + ++ A+
Sbjct: 114 WEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQC 173
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
++ A +F ME T++ +L ++ +G A++ + + G + T+
Sbjct: 174 KRISEAEYLFETMEGE---KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTF 230
Query: 497 TAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDS 555
++LT AS V ++ + GF ++ L+ +Y K ++ A L M+
Sbjct: 231 PSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEV 290
Query: 556 SGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
+ + N +I C++ GL A + K+D SIL
Sbjct: 291 DDVVSWNSMIV----GCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 18/305 (5%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
+ LM+ + G + A +F + R++ I+++L+ + G D A+ + M
Sbjct: 129 VWSLMMSGYFRIGDVHEARAIFYRVFARDLV----IWNTLIAGYAQNGYSDDAIDAFFNM 184
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
+G G P A +S++ + ++G+LD + + G N + +++ AK G L
Sbjct: 185 QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDL 244
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
+ A S+F + S SCL A G+ A++++++M + L+P T+ A+
Sbjct: 245 ENATSVFESISVRSVACCNSMISCL----AIHGKGKEALEMFSTMESLDLKPDEITFIAV 300
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDGSVDLALRWLRFMDSSGI 558
LT + KI EMK +V L+ + + G + A R ++ M +
Sbjct: 301 LTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH---V 357
Query: 559 RTNNFIIRQLFESC---MKNGLYESAKPLLET---YVNSAAKVDLVLYTSILAHLVRCQE 612
+ N+ ++ L +C M + E ++ET NS ++ L +++ AH R Q
Sbjct: 358 KPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQT 417
Query: 613 EQNER 617
+ R
Sbjct: 418 AEALR 422
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D +N LI + G + + + +M+ D+ T ++ + A+SGRLDV ++
Sbjct: 157 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 216
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+ R I + + ++L+D K G L+ A ++ +R A S+I
Sbjct: 217 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVF---ESISVRSVACC-NSMISCLAIH 272
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
GK AL ++ M+ +P+ + ++ + G L + IF++M+ P +
Sbjct: 273 GKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHF 332
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAIL 500
CL+ + SG++ A +L M ++P + A+L
Sbjct: 333 GCLIHLLGRSGKLKEAYRLVKEMH---VKPNDTVLGALL 368
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 10/217 (4%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N +I AK LE A F+ + N++I+ G ++ E++ +ME+
Sbjct: 232 NALIDMYAKCGDLENATSVFESISVR----SVACCNSMISCLAIHGKGKEALEMFSTMES 287
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
D T+ ++ + G L K+F EMK ++++P+ F L+ +G++G+L
Sbjct: 288 LDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKE 347
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN-YGLYTLIV 430
A ++ EM ++P+ T+ +L+ + + A ++ ++ AG N Y L
Sbjct: 348 AYRLVKEMH---VKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLAS 404
Query: 431 ESN--AKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
SN A + + TA ++ +MEK G +P S +L
Sbjct: 405 ISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 441
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D + +I A++G D A F M+ P SS++ + ++GRLD +++
Sbjct: 157 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 216
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+ G+ + + +LI+ Y K G L+ A +++ + + + + A
Sbjct: 217 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCL----AIH 272
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
GK A+ +F+ ME P T+ +L G + +K+++ M ++P + +
Sbjct: 273 GKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHF 332
Query: 497 TAILTLLASKKLVDVAAKILLEM 519
++ LL + A +++ EM
Sbjct: 333 GCLIHLLGRSGKLKEAYRLVKEM 355
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 13/264 (4%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
++ +I+ + GL S ++++ ME D + MI ++ R A LFQEM
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
+ N +P + + + G LD + I+ + + L + + SL++ Y K G +
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 440
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
AL ++ ++ N YT I+ A G TA+S FN+M AG P T+ L
Sbjct: 441 SEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 465 LEMHAASGQVDSAMKLYNSM-TNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
L G + + ++ M + L P + Y+ ++ LL L++ A ++ M++M
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL---MESMP 553
Query: 524 FSVDVSASDVLMVYIK-DGSVDLA 546
D + L+ + G+V+L
Sbjct: 554 MEADAAVWGALLFGCRMHGNVELG 577
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 22/276 (7%)
Query: 214 LLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFD--AYNRVIQYLAKAEKLELAFCCF 271
L+ F AL++SR D + GI + + ++N I+ +++E + +F +
Sbjct: 91 LIAFCALSESRYLDYSVKILK---------GIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 272 KKVQGSG---GKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
K++ G + D TY L + + L I + + L S + I
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMF 201
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
A G ++ A K+F E R++ ++ L++ K G + A+ +Y M G++P
Sbjct: 202 ASCGDMENARKVFDESPVRDLVS----WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDD 257
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
L+ S + G L+ ++ +K+ G R L +++ +K G + A IF++
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
+EK T +++ ++ +A G +D + KL++ M
Sbjct: 318 LEKR----TIVSWTTMISGYARCGLLDVSRKLFDDM 349
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 156/358 (43%), Gaps = 22/358 (6%)
Query: 230 QSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNAL 289
+ +FDE+++ + + Y + Y E+L ++G + YNA+
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKN-GYFDLGEEL---------LEGMDDNMKLVAYNAM 257
Query: 290 ITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNI 349
I+ ++N+G ++ E+ M ++ LD TY +I + A +G L + ++ + R
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE- 316
Query: 350 RPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALR 409
SF +SLV K G+ D A I+ +M L + +L+ Y +G + A
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDL----VSWNALLSGYVSSGHIGEAKL 372
Query: 410 LWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHA 469
++ EMK+ N + +++ A++G + + +F+ M++ GF P +S ++ A
Sbjct: 373 IFKEMKE----KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 470 ASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVS 529
G + + + + G +S A++T+ A +V+ A ++ M + VS
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD---SVS 485
Query: 530 ASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLET 587
+ ++ + G A+ M GIR + + + +C GL + + ++
Sbjct: 486 WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
NALIT++ G+ ++ +++ +M LDS ++ +I +L + G A +++EM +
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPC----LDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG-FGLRPSATMYASLIESYTKAGKLD 405
+ IRP +++ + AG +D K + M + + P A YA LI+ ++GK
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT-PSTYSCL 464
A + + + F+P ++ ++ G ++ + I + G +P TY L
Sbjct: 572 DAESVIESLP---FKPTAEIWEALLSGCRVHGNME--LGIIAADKLFGLIPEHDGTYMLL 626
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLR 490
MHAA+GQ + ++ M + G++
Sbjct: 627 SNMHAATGQWEEVARVRKLMRDRGVK 652
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 123/292 (42%), Gaps = 20/292 (6%)
Query: 235 EMVQDSSKDGISSFD-AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTY---NALI 290
EMV+ GI + Y VI+ A A L+L K+V + + ++ N+L+
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG----KQVHAYVLRREDFSFHFDNSLV 327
Query: 291 TLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIR 350
+L+ G ++ I+E M A D ++ ++ SG + A +F+EMKE+NI
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 351 PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRL 410
+ S L ++ G + +K++ M+ G P ++ I+S G +
Sbjct: 384 SWMIMISGLAEN----GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 411 WDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAA 470
++ K GF + ++ AK G ++ A +F M +++ L+
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP----CLDSVSWNALIAALGQ 495
Query: 471 SGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAM 522
G A+ +Y M G+RP T +LT + LVD K M+ +
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETV 547
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 14/271 (5%)
Query: 247 SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY 306
SF N ++ K K + A F+K+ D ++NAL++ +++ G ++ I+
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA 366
+ M+ + ++ +MI LA++G + KLF MK P FS + S
Sbjct: 375 KEMKEK----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
G + + ++ G S + +LI Y K G ++ A +++ M + +
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL----DSVSW 486
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM-T 485
++ + + G A+ ++ +M K G P T +L + +G VD K ++SM T
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 486 NAGLRPGMSTYTAILTLLA-SKKLVDVAAKI 515
+ PG Y ++ LL S K D + I
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 19/246 (7%)
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTL 428
L A ++ + FG +P A + LI+ Y K+ +L+ A +L+DE+ + P+ T
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISE----PDKIARTT 85
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPST-YSCLLEMHAASGQVDSAMKLYNSMTNA 487
+V SG + A +F EKA + Y+ ++ + + SA+ L+ M +
Sbjct: 86 MVSGYCASGDITLARGVF---EKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 488 GLRPGMSTYTAILTLLA-----SKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGS 542
G +P T+ ++L LA K+ V A L G+ VS + ++ VY K S
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAAL--KSGAGYITSVSNA-LVSVYSKCAS 199
Query: 543 VDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTS 602
L R + + + + +KNG ++ + LLE ++ + LV Y +
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN---MKLVAYNA 256
Query: 603 ILAHLV 608
+++ V
Sbjct: 257 MISGYV 262
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 12/251 (4%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N +I AK EK++ A F ++ + ++N +I + N G K+F ++
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSK----NEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
Q S+ T+ + + A +D+ ++ + N + +SL+D K G +
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
A ++ EM + + +LI Y+ G ALR+ D MK +PN + ++
Sbjct: 503 AQSVFNEMETIDVAS----WNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 432 SNAKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ +G +D F M G P Y+C++ + SGQ+D AMKL +
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIP---YE 615
Query: 491 PGMSTYTAILT 501
P + + A+L+
Sbjct: 616 PSVMIWRAMLS 626
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 101/243 (41%), Gaps = 36/243 (14%)
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
+ ++L+++ G +D+A ++ + L ++A ++ Y + G + +L+L M
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGI----LCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
+ AGF PN + ++++ G D A + + K ++ P LL+++ G +
Sbjct: 239 RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDM 298
Query: 475 DSAMKLYNS-------------------------------MTNAGLRPGMSTYTAILTLL 503
A K++N M A + P T ++IL
Sbjct: 299 SDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNN 562
A K + ++ + +GF +D+ S+ L+ VY K +D A++ + S + N
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWN 418
Query: 563 FII 565
+I
Sbjct: 419 TVI 421
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 25/267 (9%)
Query: 281 VDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
+D+ Y A++ + K P + I+ + LD +++ + K+G A L
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
F EM ERN SF + G A + + + G L P ++ S ++ +
Sbjct: 107 FDEMPERN-NVSFVTLAQ-----GYACQDPIGLYSRLHREGHELNPH--VFTSFLKLFVS 158
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
K + L + K G+ N + ++ + + G +D+A ++F + +
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 461 YSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMK 520
SC +E +G + ++KL + M AG P T+ D A K + +
Sbjct: 219 VSCYVE----NGYFEDSLKLLSCMRMAGFMPNNYTF-------------DTALKASIGLG 261
Query: 521 AMGFSVDVSASDVLMVYIKDGSVDLAL 547
A F+ V + Y+ D V + L
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGL 288
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 198/461 (42%), Gaps = 67/461 (14%)
Query: 170 KLQFLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAI 229
++ L + I +A K+ + D S S+ W + Y N L+ DA
Sbjct: 23 RITHLSRIGKIHEARKLFDSCD-SKSISSWNSMVAGYFAN----LMPRDA---------- 67
Query: 230 QSLFDEMVQDS--SKDGISSFDAYNRVIQYLAKA-----EKLELAFCCFKKVQGSGGKVD 282
+ LFDEM + S +G+ S N I K E+ +++ K GKVD
Sbjct: 68 RKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVD 127
Query: 283 TQ-------------TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLA 329
++ ++ FL G + ++YE + D+ MI L
Sbjct: 128 VAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLC 183
Query: 330 KSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
K GR+D A ++F EM ER++ ++++V G+ R+D A KI F + P T
Sbjct: 184 KEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKI------FDVMPEKT 233
Query: 390 --MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+ S++ Y + G+++ A L++ M +P +I + G++ A +F+
Sbjct: 234 EVSWTSMLMGYVQNGRIEDAEELFEVMP---VKPVIACNAMI-SGLGQKGEIAKARRVFD 289
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M++ +++ ++++H +G A+ L+ M G+RP T +IL++ AS
Sbjct: 290 SMKER----NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA 345
Query: 508 LVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGS-VDLALRWLRFMDSSGIRTNNFII 565
+ ++ ++ F VDV + VLM +YIK G V L + RF I N+ I
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII- 404
Query: 566 RQLFESCMKNGLYESA-KPLLETYVNSAAKVDLVLYTSILA 605
+GL E A K E ++ + K + V + + L+
Sbjct: 405 ----SGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 147/331 (44%), Gaps = 33/331 (9%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
++N L++ ++ G ++ ++++ M + ++ ++ +G++DVA LF +M
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 345 KERN-IRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA--SLIESYTKA 401
E+N + + + L D GR+D A K+Y + P A S+I K
Sbjct: 137 PEKNKVSWTVMLIGFLQD-----GRIDDACKLY------EMIPDKDNIARTSMIHGLCKE 185
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
G++D A ++DEM + +T +V ++ ++D A IF+ M + T ++
Sbjct: 186 GRVDEAREIFDEMSERSVIT----WTTMVTGYGQNNRVDDARKIFDVMPE----KTEVSW 237
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+ +L + +G+++ A +L+ M ++P ++ A+++ L K + A ++ MK
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMP---VKPVIAC-NAMISGLGQKGEIAKARRVFDSMKE 293
Query: 522 MGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
D S V+ ++ ++G AL M G+R + + C
Sbjct: 294 RN---DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 582 KPLLETYVNSAAKVDLVLYTSILAHLVRCQE 612
K + V VD+ + + ++ ++C E
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 123/270 (45%), Gaps = 43/270 (15%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
NA+I+ KG K+ +++SM+ + ++++ +I ++G A LF M++
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKER----NDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG------------------------- 381
+ +RP+F S++ L +++ ++
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 382 ----FGLRPSA--TMYASLIESYTKAGKLDTALRLWDEMKKAG-FRPNYGLYTLIVESNA 434
F PS M+ S+I Y G + AL+++ EM +G +PN + + + +
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 435 KSGKLDTAMSIFNDMEKA-GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGM 493
+G ++ + I+ ME G P + Y+C+++M +G+ + AM++ +SMT + P
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT---VEPDA 501
Query: 494 STYTAILTLLASKKLVDVA---AKILLEMK 520
+ + ++L + +DVA AK L+E++
Sbjct: 502 AVWGSLLGACRTHSQLDVAEFCAKKLIEIE 531
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 281 VDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
VD + L+T+++ G KS I++ S D + +I A G + A K+
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFP----SKDIIMWNSIISGYASHGLGEEALKV 419
Query: 341 FQEMK-ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRG-FGLRPSATMYASLIESY 398
F EM + +P+ F + + + AG ++ +KIY M FG++P YA +++
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479
Query: 399 TKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTP 458
+AG+ + A+ + D M P+ ++ ++ + +LD A F + P
Sbjct: 480 GRAGRFNEAMEMIDSMT---VEPDAAVWGSLLGACRTHSQLDVAE--FCAKKLIEIEPEN 534
Query: 459 S-TYSCLLEMHAASGQVDSAMKLYNSMTNAGLR--PGMS 494
S TY L M+A+ G+ +L M +R PG S
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 17/280 (6%)
Query: 241 SKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPY 300
+KD +S +N +I L + +++ A+ F+K+ G D ++ +I F KG
Sbjct: 338 NKDSVS----WNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEIS 389
Query: 301 KSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLV 360
K E++ M D+ T+ MI + +G + A F +M ++ + P+ FSS++
Sbjct: 390 KCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVL 445
Query: 361 DSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFR 420
+ L ++I+ + + ++ SL+ Y K G + A +++ + +
Sbjct: 446 SATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE---- 501
Query: 421 PNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKL 480
PN Y ++ + +G A+ +F+ +E +G P T+ LL G VD K
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKY 561
Query: 481 YNSMTNA-GLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
+ SM ++ + PG Y ++ LL L+D A+ ++ M
Sbjct: 562 FKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 114/251 (45%), Gaps = 14/251 (5%)
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
K V G D+ ++N+LIT + + +++E++E M D ++ MI +
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGK 385
Query: 332 GRLDVAFKLFQEMKER-NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATM 390
G + +LF M E+ NI +++++ + G + A+ + +M + P++
Sbjct: 386 GEISKCVELFGMMPEKDNI-----TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
++S++ + L L++ + K + + +V K G + A IF+ +
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS 500
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
+ P +Y+ ++ ++ +G A+KL++ + ++G P T+ A+L+ VD
Sbjct: 501 E----PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVD 556
Query: 511 VAAKILLEMKA 521
+ K MK+
Sbjct: 557 LGWKYFKSMKS 567
>AT5G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5213290-5215296 FORWARD
Length = 668
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 195/461 (42%), Gaps = 78/461 (16%)
Query: 150 KIVEVVKRWKWGPELETHLDKL--QFLPNMTHILQALKIVNDIDA----SLSLYKWAKRQ 203
++ ++V + +WG ++E + L +F ++ + IV +D +L ++W
Sbjct: 226 RVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKM-----IVERLDVEPRKALLFFRWIDES 280
Query: 204 SWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEK 263
+ +E+ Y + L + + D Q++ EM
Sbjct: 281 DLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEM--------------------------- 313
Query: 264 LELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSST--- 320
+ +G +V+ +TY + T F L ++ +++E A S ++ T
Sbjct: 314 -----------RSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHC 362
Query: 321 YELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKA----GRLDTAMKIY 376
+ L++ + + LD+ LF + + + SL+ S+ K+ R++ + ++
Sbjct: 363 FCLLLKKIVTAKILDM--DLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELL 420
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
EM+ G PS M + + S ++ GK D A D M+ +G + +VE S
Sbjct: 421 KEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDS 480
Query: 437 GKLDTAMSIFNDM-EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS-MTNAGLRPGMS 494
G LD A+ F M G ++ L+ + QV A KL ++ +T L+P S
Sbjct: 481 GNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHS 540
Query: 495 TYTAILTLLASKKLV-----DVAAKILLEMKAMGFSVDVSASDVLMVYIKD-GSVDLALR 548
TY +++T L +KK+ + A +L MK GF + D M Y G AL
Sbjct: 541 TYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFI---DPFMSYFSSTGKSTEALG 597
Query: 549 WLRFMDSSGIRTNNF----IIRQLFESCMKNGLYESAKPLL 585
+L+ M S NNF ++ ++FE+ MK+ + A+ LL
Sbjct: 598 FLKAMTS-----NNFPYISVVLRVFETMMKSARHSEAQDLL 633
>AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6165449-6167515 FORWARD
Length = 688
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 130/305 (42%), Gaps = 5/305 (1%)
Query: 206 YVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLE 265
+ P+E Y LL ++L + D +++ + M++ D ++ Y R + + E
Sbjct: 373 FFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPT--E 430
Query: 266 LAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ-CSLDSSTYELM 324
+ +QG + D T N +I G + ++ + M + C+ D+ T +
Sbjct: 431 ILNVLVSMLQGDC-RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 325 IPSLAKSGRLDVAFKLFQE-MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
+ L GR + A + M E I+P +++++ + K + D AM ++ ++
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
+ +T YA +I+ K+D A + WD++ R + +Y ++ +SG L A
Sbjct: 550 VTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDAC 609
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
D+ +G +P Y+ ++ + SG A ++ M G P T+ + L
Sbjct: 610 HFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH 669
Query: 504 ASKKL 508
S L
Sbjct: 670 DSMDL 674
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 153/363 (42%), Gaps = 24/363 (6%)
Query: 224 RDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
R DA + +FD + D ++ + +I + +LE+A F +++ G + ++
Sbjct: 177 RVIDAHKLVFDMRNRGHLPDVVT----FTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNS 232
Query: 284 QTYNALITLFL-----NKGLPYKSFEIYESME-AAQCSLDSSTYELMIPSLAKSGRLDVA 337
T + LI FL G E++E M+ S+ ++ + ++ S+ + G +
Sbjct: 233 LTLSVLIGGFLKMRDVETGRKLMK-ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDI 291
Query: 338 FKLFQEM---KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
F++ + M + N+ ++G ++DS+ + R A +I M+ GL+P T Y ++
Sbjct: 292 FEIAENMSLCESVNVEFAYG---HMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAI 348
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I K G A +L +E + F P+ Y L++ES K A ++ M +
Sbjct: 349 IHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEG 408
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAK 514
Y+ L + + SM RP T ++ L VD A K
Sbjct: 409 ADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMK 468
Query: 515 ILLEMKAMGFSV--DVSASDVLMVYIKDGSVDLALRWL-RFMDSS----GIRTNNFIIRQ 567
+L +M F V+ + V+ + G + AL L R M + G+ N +IR
Sbjct: 469 VLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRG 528
Query: 568 LFE 570
LF+
Sbjct: 529 LFK 531
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 121/311 (38%), Gaps = 37/311 (11%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
AY +I L + + A ++ G K +YNA+I G +++++ E
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 310 EAAQCSLDSSTYELMIPSLAKS-----GRLDVAFKLFQEMKER----------------- 347
+ TY+L++ SL K R + L +E +R
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNP 428
Query: 348 -------------NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM-RGFGLRPSATMYAS 393
+ RP +++++ + K GR+D AMK+ +M G P A +
Sbjct: 429 TEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNT 488
Query: 394 LIESYTKAGKLDTALRLWDE-MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
++ G+ + AL + + M + +P Y ++ K K D AMS+F +EKA
Sbjct: 489 VMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKA 548
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
+TY+ +++ + +VD A K ++ + R Y A L L + A
Sbjct: 549 SVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDA 608
Query: 513 AKILLEMKAMG 523
L ++ G
Sbjct: 609 CHFLYDLADSG 619
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 7/254 (2%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
VI L A + + A F SG D +T N +I L P + + + +
Sbjct: 96 VIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFK 155
Query: 314 CSLDSS--TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
S Y ++ L R+ A KL +M+ R P F++L+ + L+
Sbjct: 156 KEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEV 215
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALR----LWDEMK-KAGFRPNYGLY 426
A K++ EMR G+RP++ + LI + K ++T + LW+ MK + +
Sbjct: 216 AHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAF 275
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTN 486
+V+S + G + I +M + Y +++ + A ++ M +
Sbjct: 276 ANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKS 335
Query: 487 AGLRPGMSTYTAIL 500
GL+P ++Y AI+
Sbjct: 336 KGLKPRRTSYNAII 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
D A++I + G RP + +S+I S AG+ D A R + +GF P+ +I
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 430 VESNAKSGKLDTAMSIFNDME--KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 487
+ S + + + + + K F+P+ + Y+ L+ +V A KL M N
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLAL 547
G P + T+T ++ + ++VA K+ EM+ G I+ S+ L++
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCG--------------IRPNSLTLSV 237
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAK 582
F+ + T ++++L+E MKN S K
Sbjct: 238 LIGGFLKMRDVETGRKLMKELWEY-MKNETDTSMK 271
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA----TM 390
D A ++ + R RP SS++ S+ AGR D A + ++ G P +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 391 YASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
A L+ S + L RL K+ F P+ Y ++ ++ A + DM
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKE--FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMR 189
Query: 451 KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
G LP T++ L+ + +++ A K+++ M G+RP T + ++ + V+
Sbjct: 190 NRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVE 249
Query: 511 VAAKILLEM 519
K++ E+
Sbjct: 250 TGRKLMKEL 258
>AT5G03560.2 | Symbols: | nucleobase:cation symporter |
chr5:901452-902719 REVERSE
Length = 363
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
M +L+K GR A +LF ++K++N P +++V++ AG+ +K++M M G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 384 LRPSATMYASLIESYTKAGKL-DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
+ P+A Y+ LI+ GK A + EM G PN YT + E+ + GK ++A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 443 MSIFNDMEKAGFLPTPSTYSCLLEMHAASGQV 474
+ +M+ GF+P LE GQV
Sbjct: 323 RELLQEMKGKGFVPDEKAVREALEYK--RGQV 352
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Query: 373 MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
+I+ +MR G A + ++ +K G+ AL L+ ++K P+ +T IVE+
Sbjct: 185 QEIFHKMRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEA 241
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLY-NSMTNAGLRP 491
A +G+ + +F M +G P TYS L++ AA G+ K Y M G+ P
Sbjct: 242 YANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSP 301
Query: 492 GMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSV 543
+TYTA+ + + A ++L EMK GF D A + Y K G V
Sbjct: 302 NAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEY-KRGQV 352
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 297 GLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIF 356
G +++ E++ ++ D + ++ + A +G+ K+F M + P+ +
Sbjct: 211 GRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTY 270
Query: 357 SSLVDSMGKAGRLDTAMKIYM-EMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMK 415
S L+ + G+ K Y+ EM G G+ P+A Y ++ E++ + GK ++A L EMK
Sbjct: 271 SVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMK 330
Query: 416 KAGFRPN 422
GF P+
Sbjct: 331 GKGFVPD 337
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY 398
+LF+EM +R + + +++L+ + +AG D A +I+ EM G+ P Y L++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 399 TKAGKLDTALRL------WD---EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
K GKL+ AL WD + G +PN YT ++ K G + A ++F M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
++ G LP TY+ L+ H G ++ +L M + STY + +L +L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 180
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 304 EIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSM 363
E++ M ++ TY +I L ++G D+A ++F+EM + P ++ L+D +
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 364 GKAGRLDTAM---------KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
K G+L+ A+ ++ + G++P+ Y ++I + K G + A L+ +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEM 467
K+ G P+ G Y ++ ++ + G + + +M F STY + +M
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 174
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 9/181 (4%)
Query: 373 MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
M+++ EM GL + Y +LI+ +AG D A ++ EM G P+ Y ++++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 433 NAKSGKLDTAM---------SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
K+GKL+ A+ +F + G P TY+ ++ G + A L+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 484 MTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSV 543
M G P TY ++ +A+++ EM++ F+ D S ++ + DG +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 180
Query: 544 D 544
D
Sbjct: 181 D 181
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 78/186 (41%), Gaps = 16/186 (8%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
Q V N Y L L Q+ D D Q +F EMV D I + YN ++ L K
Sbjct: 9 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMT---YNILLDGLCKNG 65
Query: 263 KLELAFCCFKKVQG---------SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
KLE A K G G K + TY +I+ F KG +++ ++ M+
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDG 125
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
DS TY +I + + G + +L +EM+ + LV M GRLD
Sbjct: 126 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLD--- 181
Query: 374 KIYMEM 379
K ++EM
Sbjct: 182 KGFLEM 187
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 124/271 (45%), Gaps = 13/271 (4%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
A N +I A +LA F ++ + D ++N++I ++ G + ++ M
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
++ ++ MI ++ A +LF EM+ ++ P ++ + + + G L
Sbjct: 208 AEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ I+ + +R + + LI+ Y K G+++ AL ++ +KK + +T +
Sbjct: 264 EQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA----WTAL 319
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT-NAG 488
+ A G A+S F +M+K G P T++ +L + +G V+ ++ SM +
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
L+P + Y I+ LL L+D A + + EM
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D ++ +I K+G++D+A LF++M E+N +++++ +A A++++
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAIS----WTTMISGYVQADMNKEALQLF 235
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
EM+ + P A+ + + + G L+ + + K R + L ++++ AK
Sbjct: 236 HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC 295
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
G+++ A+ +F +++K + ++ L+ +A G A+ + M G++P + T+
Sbjct: 296 GEMEEALEVFKNIKK----KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITF 351
Query: 497 TAILTLLASKKLVDVAAKILLEMK 520
TA+LT + LV+ I M+
Sbjct: 352 TAVLTACSYTGLVEEGKLIFYSME 375
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 164/371 (44%), Gaps = 24/371 (6%)
Query: 188 NDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISS 247
ND +A+LSLY+ K S P++ Y +F A + + +S+ + K G+
Sbjct: 107 NDHEAALSLYRRMKF-SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF----KVGLER 161
Query: 248 FDAYNR-VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY 306
N +I AK ++ A F ++ + DT ++N++I+ + G + +++
Sbjct: 162 DVHINHSLIMMYAKCGQVGYARKLFDEIT----ERDTVSWNSMISGYSEAGYAKDAMDLF 217
Query: 307 ESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK-ERNIRPSFGIFSSLVDSMGK 365
ME D T M+ + + G L +L +EM + I S + S L+ GK
Sbjct: 218 RKMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGK 276
Query: 366 AGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL 425
G LD+A +++ +M ++ + ++I Y++ GK A +L+ EM+K G P+ G
Sbjct: 277 CGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 332
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMT 485
+ ++ + G L+ I + + L++M+ G+V+ A++++ +M
Sbjct: 333 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 392
Query: 486 NAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF-SVDVSASDVLMVYIKDGSVD 544
+T+ A++T A + A + LL M D++ VL + G V
Sbjct: 393 ----VKNEATWNAMITAYAHQ---GHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVH 445
Query: 545 LALRWLRFMDS 555
R+ M S
Sbjct: 446 QGCRYFHEMSS 456
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 8/197 (4%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D + MI +++G+ AFKLF EM++ + P G S+++ + G G L+ +I
Sbjct: 294 DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIE 353
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
L+ + + L++ Y K G+++ ALR+++ M N + ++ + A
Sbjct: 354 THASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV----KNEATWNAMITAYAHQ 409
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA-GLRPGMST 495
G A+ +F+ M P+ T+ +L +G V + ++ M++ GL P +
Sbjct: 410 GHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 466
Query: 496 YTAILTLLASKKLVDVA 512
YT I+ LL+ ++D A
Sbjct: 467 YTNIIDLLSRAGMLDEA 483
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 149/322 (46%), Gaps = 21/322 (6%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
+ + P+E + + A + D + L +EM + K G+S+F +++I K
Sbjct: 222 EEGFEPDERTLVSMLGACSHLGDLRTGR-LLEEMAI-TKKIGLSTFLG-SKLISMYGKCG 278
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
L+ A F ++ K D + A+IT++ G ++F+++ ME S D+ T
Sbjct: 279 DLDSARRVFNQMI----KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLS 334
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
++ + G L++ ++ E +++ + + + LVD GK GR++ A++++ M
Sbjct: 335 TVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP-- 392
Query: 383 GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
++ AT + ++I +Y G AL L+D M P+ + ++ + +G +
Sbjct: 393 -VKNEAT-WNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQG 447
Query: 443 MSIFNDMEKA-GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT 501
F++M G +P Y+ ++++ + +G +D A + +P AIL
Sbjct: 448 CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPG---KPDEIMLAAILG 504
Query: 502 LLASKKLVDV---AAKILLEMK 520
+K V + A ++L+EMK
Sbjct: 505 ACHKRKDVAIREKAMRMLMEMK 526
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 159/356 (44%), Gaps = 25/356 (7%)
Query: 175 PNMTHILQALKIVNDIDA---SLSLYKWAKRQSWYVPNEECYLLLF---DALNQSRDFDA 228
PN+ + ND+ +LS+++ PNE + +F AL +SR
Sbjct: 93 PNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKN 152
Query: 229 IQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNA 288
I + + + ++ + S + ++ K +E A F + G G V ++ +
Sbjct: 153 IHARLE--ISGLRRNIVVS----SSLVDMYGKCNDVETARRVFDSMIGYGRNV--VSWTS 204
Query: 289 LITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYEL--MIPSLAKSGRLDVAFKLFQEMKE 346
+IT + +++ E++ S AA S ++ + L +I + + GRL +
Sbjct: 205 MITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTR 264
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDT 406
+ + +SL+D K G L A KI++ +R S Y S+I + K G +
Sbjct: 265 GGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH----SVISYTSMIMAKAKHGLGEA 320
Query: 407 ALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCLL 465
A++L+DEM PNY ++ + + SG ++ + + M EK G +P Y+C++
Sbjct: 321 AVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVV 380
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT---LLASKKLVDVAAKILLE 518
+M G+VD A +L ++ G G + A+L+ L ++V A+K L++
Sbjct: 381 DMLGRFGRVDEAYELAKTI-EVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQ 435
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 127/299 (42%), Gaps = 12/299 (4%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
DT T N L+ ++ + ++++ M C + ++ +I G+ A +F
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEM----CEPNVVSWTSVISGYNDMGKPQNALSMF 118
Query: 342 QEMKE-RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
Q+M E R + P+ F+S+ + I+ + GLR + + +SL++ Y K
Sbjct: 119 QKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGK 178
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST 460
++TA R++D M G+ N +T ++ + A++ + A+ +F A +
Sbjct: 179 CNDVETARRVFDSM--IGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQ 236
Query: 461 YSCLLEMHAAS--GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLE 518
+ + A S G++ + +T G T++L + A + A KI L
Sbjct: 237 FMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLR 296
Query: 519 MKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGL 577
++ +S + ++M K G + A++ M + I N + + +C +GL
Sbjct: 297 IRCHSV---ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGL 352
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 100/221 (45%), Gaps = 10/221 (4%)
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
L+ SY K +++TA +L+DEM + PN +T ++ GK A+S+F M +
Sbjct: 70 LVISYVKLKEINTARKLFDEMCE----PNVVSWTSVISGYNDMGKPQNALSMFQKMHEDR 125
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAM--KLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
+P P+ Y+ A S +S + ++ + +GLR + ++++ + V+
Sbjct: 126 PVP-PNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVET 184
Query: 512 AAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDS--SGIRTNNFIIRQLF 569
A ++ M G +V VS + ++ Y ++ A+ R ++ + R N F++ +
Sbjct: 185 ARRVFDSMIGYGRNV-VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVI 243
Query: 570 ESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRC 610
+C G + K + + V+ TS+L +C
Sbjct: 244 SACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKC 284
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 145/326 (44%), Gaps = 9/326 (2%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
+N ++ LAK+ + FKK+ SG ++D+ T++ + F + + +++ +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ +S ++ K+ R+D A K+F EM ER++ ++S+++ G +
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS----WNSIINGYVSNGLAE 278
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
+ ++++M G+ S+ + + + KA F ++
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 431 ESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ +K G LD+A ++F +M + +Y+ ++ +A G A+KL+ M G+
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVV----SYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 491 PGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRW 549
P + T TA+L A +L+D ++ +K D+ S+ LM +Y K GS+ A
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKN 575
M I + N II ++C N
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYAN 480
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 13/252 (5%)
Query: 328 LAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPS 387
+SG L+ A KL + +I P S++ + L ++ +RG G
Sbjct: 71 FCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMK--KAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
+ + + L YT G L A R++DE+K KA F + +++ AKSG ++ +
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALF------WNILMNELAKSGDFSGSIGL 182
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
F M +G T+SC+ + ++ V +L+ + +G S +++
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFII 565
+ VD A K+ EM +S + ++ Y+ +G + L M SGI + I
Sbjct: 243 NQRVDSARKVFDEMTERDV---ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 566 RQLFESCMKNGL 577
+F C + L
Sbjct: 300 VSVFAGCADSRL 311
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 116/271 (42%), Gaps = 10/271 (3%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
+Y ++I + +GL ++ +++E ME S D T ++ A+ LD ++ + +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
KE ++ + ++L+D K G + A ++ EMR + ++I Y+K
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR----VKDIISWNTIIGGYSKNCYA 479
Query: 405 DTALRLWD-EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
+ AL L++ +++ F P+ ++ + A D I + + G+ +
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMG 523
L++M+A G + A L++ + + L ++T ++ A + +M+ G
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASKDL----VSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 524 FSVD-VSASDVLMVYIKDGSVDLALRWLRFM 553
D +S +L G VD R+ M
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 3/227 (1%)
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
K D T+N L + P K+ ++ E M A ++ TY I + ++G +D A
Sbjct: 163 KPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAAD 222
Query: 340 LFQEMKERNIR---PSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
LF M + P+ F+ ++ ++ K + + ++ M G P + Y +IE
Sbjct: 223 LFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIE 282
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
A K+D A + DEM G+ P+ Y + ++ K D A+ ++ M ++ P
Sbjct: 283 GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAP 342
Query: 457 TPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
+ TY+ L+ M D A + M + TY A++ L
Sbjct: 343 SVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGL 389
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 3/232 (1%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESM---EAAQCSLDSSTYELMIPSLAKSGR 333
+G K + TY A I F G+ ++ ++++ M +A + + T+ LMI +LAK+ +
Sbjct: 195 AGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDK 254
Query: 334 LDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYAS 393
+ F+L M P + +++ M A ++D A K EM G P Y
Sbjct: 255 AEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNC 314
Query: 394 LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAG 453
+ + K D AL+L+ M ++ P+ Y +++ + D A + + +M+K
Sbjct: 315 FLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRD 374
Query: 454 FLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+ TY ++ + A L + N GL+ + + L L+
Sbjct: 375 CVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSE 426
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Query: 207 VPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLEL 266
+P+ Y + + + + D DEM I +++ + RV L + K +
Sbjct: 271 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRV---LCENRKTDE 327
Query: 267 AFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIP 326
A + ++ S QTYN LI++F P +F + M+ C D TY MI
Sbjct: 328 ALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN 387
Query: 327 SLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
L R A L +E+ + ++ + +F S + + + G L K+ M+ F
Sbjct: 388 GLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKF 443
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 5/229 (2%)
Query: 190 IDASLSLYKW--AKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISS 247
+D + L+ + K + P + + L+ AL ++ + L M+ +S+
Sbjct: 217 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 276
Query: 248 FDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYE 307
Y VI+ + AEK++ A+ ++ G D TYN + + ++ ++Y
Sbjct: 277 ---YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 333
Query: 308 SMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
M ++C+ TY ++I + D AF + EM +R+ + ++++ +
Sbjct: 334 RMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCH 393
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKK 416
R A + E+ GL+ ++ S + ++ G L ++ + MKK
Sbjct: 394 RAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 442
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 92/249 (36%)
Query: 203 QSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAE 262
++ + P Y D Q+ D LFD M+ S + + +I LAK +
Sbjct: 194 EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKND 253
Query: 263 KLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYE 322
K E F ++ +G D TY +I ++++ + M D TY
Sbjct: 254 KAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYN 313
Query: 323 LMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF 382
+ L ++ + D A KL+ M E PS ++ L+ + D A + EM
Sbjct: 314 CFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKR 373
Query: 383 GLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTA 442
Y ++I + A L +E+ G + Y ++ + ++ G L
Sbjct: 374 DCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAI 433
Query: 443 MSIFNDMEK 451
+ M+K
Sbjct: 434 HKVSEHMKK 442
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 41/298 (13%)
Query: 260 KAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSS 319
K + LA F K Q K +++N +I+ +++ G +K+ E+Y+ M + D
Sbjct: 356 KCGEANLAETVFSKTQ----KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVV 411
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
T+ ++P+ ++ L+ ++ + E + + S+L+D K G A +I+ +
Sbjct: 412 TFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
+ + +I +Y G+ AL +DEM+K G +P+ ++ + +G +
Sbjct: 472 P----KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLI 527
Query: 440 DTAMSIFNDME-KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYN----SMTNAGLRPGM- 493
D + F+ M K G P YSC++++ +G++ A ++ + NA L +
Sbjct: 528 DEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLF 587
Query: 494 ---------------------------STYTAILTLLASKKLVDVAAKILLEMKAMGF 524
STY + L AS + D A ++ L+MK MG
Sbjct: 588 SACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGL 645
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 144/361 (39%), Gaps = 47/361 (13%)
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESM-EAAQCSLDSSTYELMIPSLAKSGRLDVAF 338
+ D +N+L++ + + + + E+++ + + C DS T+ +I + GR +
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESY 398
+ + + + SSLV K + +++++ EM + ++I +
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP----ERDVASWNTVISCF 183
Query: 399 TKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTP 458
++G+ + AL L+ M+ +GF PN T+ + + ++ L+ I K GF
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 459 STYSCLLEMHA-------------------------------ASGQVDSAMKLYNSMTNA 487
S L++M+ A G S +++ N M
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 488 GLRPGMSTYTAILTLLA-SKKLVD---VAAKILLEMKAMGFSVDVSASDVLMVYIKDGSV 543
G RP +T T+IL + S+ L+ + ++ + V+ S D +Y K G
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLID---LYFKCGEA 360
Query: 544 DLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSI 603
+LA + N +I S + G + A + + V+ K D+V +TS+
Sbjct: 361 NLAETVFSKTQKDVAESWNVMI----SSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSV 416
Query: 604 L 604
L
Sbjct: 417 L 417
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 111/238 (46%), Gaps = 12/238 (5%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N++I AK +K++ A F + S + D T+ +I + G K+ E+ M
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSL--SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 312 AQCSLDSSTYELMIPSLAKSG----RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
C + + + +A + R+ + ++N P F + + L+D K G
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF-VSNCLIDMYAKCG 527
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYT 427
+ A ++ M + + + SL+ Y G + AL ++DEM++ GF+ +
Sbjct: 528 SISDARLVFDNM----MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 428 LIVESNAKSGKLDTAMSIFNDMEKA-GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
+++ + + SG +D M FN M+ G P P Y+CL+++ +G++++A++L M
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 150/358 (41%), Gaps = 38/358 (10%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
L D + D ++F M S KD +S +N ++ ++ + E A F+K+Q
Sbjct: 270 LVDMYAKCGMMDEANTVFSNM---SVKDVVS----WNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL- 334
K+D T++A I+ + +GL Y++ + M ++ + T ++ A G L
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 335 ------DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRP-- 386
A K ++++ + + L+D K ++DTA ++ L P
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS-----LSPKE 437
Query: 387 -SATMYASLIESYTKAGKLDTALRLWDEM--KKAGFRPNYGLYTLIVESNA-----KSGK 438
+ +I Y++ G + AL L EM + RPN + + + A + GK
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 439 LDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTA 498
A ++ N + +CL++M+A G + A ++++M + T+T+
Sbjct: 498 QIHAYALRNQQNAVPLFVS----NCLIDMYAKCGSISDARLVFDNM----MAKNEVTWTS 549
Query: 499 ILTLLASKKLVDVAAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDS 555
++T + A I EM+ +GF +D V+ VL G +D + + M +
Sbjct: 550 LMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 122/271 (45%), Gaps = 17/271 (6%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKE 346
N L+ ++ G+ ++ ++ +M D ++ M+ ++ GR + A +LF++M+E
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVK----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 347 RNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL-- 404
I+ +S+ + + G A+ + +M G++P+ S++ G L
Sbjct: 324 EKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMH 383
Query: 405 -----DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
A++ +++K G + +++ AK K+DTA ++F+ +
Sbjct: 384 GKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE--RDVV 441
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSM--TNAGLRPGMSTYTAILTLLASKKLVDVAAKI-L 516
T++ ++ ++ G + A++L + M + RP T + L AS + + +I
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 517 LEMKAMGFSVDVSASDVLM-VYIKDGSVDLA 546
++ +V + S+ L+ +Y K GS+ A
Sbjct: 502 YALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 147/349 (42%), Gaps = 56/349 (16%)
Query: 209 NEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAF 268
N + L A +S + + +S+FD M + + ++N ++ L K+ L A
Sbjct: 175 NAVSWTALVVAYVKSGELEEAKSMFDLMPE-------RNLGSWNALVDGLVKSGDLVNA- 226
Query: 269 CCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSL 328
KK+ K D +Y ++I + G + +++E +D + +I
Sbjct: 227 ---KKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARG----VDVRAWSALILGY 279
Query: 329 AKSGRLDVAFKLFQEMKERNIRPS-------------FGIFS------------------ 357
A++G+ + AFK+F EM +N++P G F
Sbjct: 280 AQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSS 339
Query: 358 -----SLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWD 412
+L+D K G +D A K++ EM L Y S++E G A+RL++
Sbjct: 340 HYVVPALIDMNAKCGHMDRAAKLFEEMPQRDL----VSYCSMMEGMAIHGCGSEAIRLFE 395
Query: 413 EMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA-GFLPTPSTYSCLLEMHAAS 471
+M G P+ +T+I++ +S ++ + F M K L +P YSC++ + + +
Sbjct: 396 KMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRT 455
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMK 520
G++ A +L SM + +L + ++ +V A+ L E++
Sbjct: 456 GKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELE 504
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 152/341 (44%), Gaps = 35/341 (10%)
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIY-ESMEAAQCSLDSSTYELMIPSLA 329
F++V G T +N LI + NK L +++ I M D T+ L++ +
Sbjct: 66 FERVPSPG----TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCS 121
Query: 330 KSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
+G++ V + + + +S VD GK L +A K++ EM +A
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMP----ERNAV 177
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
+ +L+ +Y K+G+L+ A ++D M + N G + +V+ KSG L A +F++M
Sbjct: 178 SWTALVVAYVKSGELEEAKSMFDLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEM 233
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
K + +Y+ +++ +A G + SA L+ +R ++A++ A
Sbjct: 234 PKRDII----SYTSMIDGYAKGGDMVSARDLFEEARGVDVR----AWSALILGYAQNGQP 285
Query: 510 DVAAKILLEMKAMGFSVDVSASDVLMVYI-----KDGSVDLALRWLRFMDSSGIR-TNNF 563
+ A K+ EM A +V + +MV + + G +L + ++ + ++++
Sbjct: 286 NEAFKVFSEMCAK----NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHY 341
Query: 564 IIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
++ L + K G + A L E + DLV Y S++
Sbjct: 342 VVPALIDMNAKCGHMDRAAKLFE----EMPQRDLVSYCSMM 378
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 12/246 (4%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
+G +D N +I+ + G +F + + D +Y +I + R +
Sbjct: 337 AGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK----DVISYNSLITGCVVNCRPEE 392
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
+F+LF EM+ IRP ++ + L + G + ++ +L++
Sbjct: 393 SFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMD 452
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRP-NYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFL 455
YTK GKLD A R++D M K N L+ + K A+S+FN M++ G
Sbjct: 453 MYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKE-----ALSLFNSMQETGVN 507
Query: 456 PTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR--PGMSTYTAILTLLASKKLVDVAA 513
P T +L + SG VD +L+NSM+ P + Y + LLA +D A
Sbjct: 508 PDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAY 567
Query: 514 KILLEM 519
+ +M
Sbjct: 568 DFVNKM 573
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 8/211 (3%)
Query: 316 LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKI 375
LD + +I AK G L AF+ F E+ +++ ++SL+ R + + ++
Sbjct: 341 LDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVIS----YNSLITGCVVNCRPEESFRL 396
Query: 376 YMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
+ EMR G+RP T ++ + + L G+ N + +++ K
Sbjct: 397 FHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTK 456
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMST 495
GKLD A +F+ M K + +++ +L G A+ L+NSM G+ P T
Sbjct: 457 CGKLDVAKRVFDTMHKRDIV----SWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVT 512
Query: 496 YTAILTLLASKKLVDVAAKILLEMKAMGFSV 526
AIL+ + LVD ++ M F+V
Sbjct: 513 LLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 33/284 (11%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALI-------TLFLNKGLPYKS 302
AYN +I + EL+ FK++ SG ++ + T +L+ ++ G KS
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKS 348
Query: 303 ---------------FEIYESMEAAQCSLDSS------TYELMIPSLAKSGRLDVAFKLF 341
+ +E+A+ D S ++ MI ++G + A LF
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+EM++ P+ + ++ + + G L ++ +R S + +LI Y K
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
G + A RL+D M K N + ++ G+ A++IF +M +G PTP T+
Sbjct: 469 GSIAEARRLFDLMTK----KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTF 524
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNA-GLRPGMSTYTAILTLLA 504
C+L + +G V +++NSM + G P + Y ++ +L
Sbjct: 525 LCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/423 (19%), Positives = 175/423 (41%), Gaps = 43/423 (10%)
Query: 173 FLPNMTHILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSL 232
FL N+ +++ + +SLS++ ++ + PN Y A + RD A + +
Sbjct: 84 FLFNV--LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 233 FDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITL 292
+ V D S + +++ K ++E A F ++ + DT +N +I+
Sbjct: 142 HGQAVVDGCD---SELLLGSNIVKMYFKFWRVEDARKVFDRMP----EKDTILWNTMISG 194
Query: 293 FLNKGLPYKSFEIYESMEAAQCS-LDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRP 351
+ + +S +++ + C+ LD++T ++P++A+ L + ++ +
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
+ + + K G++ ++ E R +P Y ++I YT G+ + +L L+
Sbjct: 255 HDYVLTGFISLYSKCGKIKMGSALFREFR----KPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 412 DEMKKAGFRPN-----------------YGLYTLIVESN-----AKSGKLDTAMSIFNDM 449
E+ +G R Y ++ ++SN + S L T S N++
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 450 EKAG--FLPTPS----TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
E A F +P +++ ++ + +G + A+ L+ M + P T T IL+
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNN 562
A + + + +++ F + S L+ +Y K GS+ A R M T N
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 563 FII 565
+I
Sbjct: 491 TMI 493
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 119/278 (42%), Gaps = 18/278 (6%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D Y MI +G +++ LF+E+ R SLV G M IY
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL------MLIY 339
Query: 377 MEMRGFGLRPS----ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
+ G+ L+ + A++ +L Y+K ++++A +L+DE + P++ ++
Sbjct: 340 A-IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL-PSW---NAMISG 394
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
++G + A+S+F +M+K+ F P P T +C+L A G + +++ + +
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 493 MSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRF 552
+ TA++ + A + A ++ M +V+ + ++ Y G AL
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKN---EVTWNTMISGYGLHGQGQEALNIFYE 511
Query: 553 MDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVN 590
M +SGI + +C GL + + + ++
Sbjct: 512 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 117/245 (47%), Gaps = 12/245 (4%)
Query: 282 DTQTYNALITLFLNKGLPYK-SFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKL 340
D YNA++ F G K S ++Y SM+ A + ST+ +I + + +V ++
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
++ + + + SSL+D K G ++ A +++ +M+ + + S+I+ Y K
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ----EKNVFSWTSMIDGYGK 351
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA-GFLPTPS 459
G + AL L+ MK+ PNY + + + + SG +D IF M++ P
Sbjct: 352 NGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKME 411
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILT---LLASKKLVDVAAKIL 516
Y+C++++ +G ++ A + +M RP + A+L+ L + +L +AA L
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPE---RPDSDIWAALLSSCNLHGNVELASIAASEL 468
Query: 517 LEMKA 521
++ A
Sbjct: 469 FKLNA 473
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/324 (17%), Positives = 139/324 (42%), Gaps = 44/324 (13%)
Query: 230 QSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNAL 289
+ +FDE+ + + AYN +I K ++ +++ SG K D T + +
Sbjct: 89 RQVFDELPK-------PTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMV 141
Query: 290 ITLFLNKG----LPYKSFE-IYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
+ ++G LP ++ + LD ++ + KSG+L+ A +F+ M
Sbjct: 142 LKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
Query: 345 KERNI---------------------------RPSFGIFSSLVDSMGKAGRL-DTAMKIY 376
K+ N+ +++++V+ ++G ++ +Y
Sbjct: 202 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMY 261
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
+ M+ G P+ + +AS+I + + + ++ ++ K+G + + + +++ AK
Sbjct: 262 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKC 321
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTY 496
G ++ A +F+ M++ +++ +++ + +G + A++L+ M + P T+
Sbjct: 322 GGINDARRVFDQMQEKNVF----SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTF 377
Query: 497 TAILTLLASKKLVDVAAKILLEMK 520
L+ + LVD +I M+
Sbjct: 378 LGALSACSHSGLVDKGYEIFESMQ 401
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
++ ++I + G P ++ E++ M+ + + T+ + + + SG +D +++F+ M
Sbjct: 341 SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM 400
Query: 345 -KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
++ +++P ++ +VD MG+AG L+ A + R RP + ++A+L+ S G
Sbjct: 401 QRDYSMKPKMEHYACIVDLMGRAGDLNKAFEF---ARAMPERPDSDIWAALLSSCNLHGN 457
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
++ A E+ K G Y + A + K D I M++
Sbjct: 458 VELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKR 505
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 129/275 (46%), Gaps = 13/275 (4%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
A+N ++ L+ A L+ A +++ G K D T+N+L + + G P K+ ++ M
Sbjct: 25 AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM 84
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
+ + + ++ + +K+G A K+F +M+E + P+ S+L+ +G L
Sbjct: 85 KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLL 144
Query: 370 DTAMKIYMEMRGFGLRPS----ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL 425
+ E+ GF LR + A + +L++ Y K+G L +A+ ++ +K
Sbjct: 145 HSG----KEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLAS---- 196
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM- 484
+ ++ A G+ + ++ F+ M +AG P T++ +L + SG V K ++ M
Sbjct: 197 WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMR 256
Query: 485 TNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
+ G+ P + + ++ LL +D A + M
Sbjct: 257 SRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM 291
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 7/252 (2%)
Query: 330 KSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSAT 389
K+G L A +F M +NI ++SLV + A L A + + M G++P A
Sbjct: 4 KTGYLPYARMVFDMMDAKNIVA----WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAI 59
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
+ SL Y GK + AL + +MK+ G PN +T I +K+G A+ +F M
Sbjct: 60 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 119
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
++ G P +T S LL++ + S +++ L TA++ + +
Sbjct: 120 QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDL 179
Query: 510 DVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLF 569
A +I +K + S + +LM Y G + + M +G+ + +
Sbjct: 180 QSAIEIFWGIKNKSLA---SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 236
Query: 570 ESCMKNGLYESA 581
C +GL +
Sbjct: 237 SVCKNSGLVQEG 248
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D T+N +I+ ++ +GL + + + M + D T ++ + A++ L KL
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL----KLG 394
Query: 342 QEMKERNIRPSFG----IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
+E++ IR SF + S+++D K G + A K++ + ++ +L+ +
Sbjct: 395 KEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST----VEKDLILWNTLLAA 450
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
Y ++G ALRL+ M+ G PN + LI+ S ++G++D A +F M+ +G +P
Sbjct: 451 YAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPN 510
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLA 504
+++ ++ +G + A+ M +GLRP + T L+ A
Sbjct: 511 LISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 128/285 (44%), Gaps = 41/285 (14%)
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
KKV S + D +N L+ + GL ++ ++ M+ + T+ L+I SL ++
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA--- 388
G++D A +F +M+ I P+ ++++++ M + G + A+ +M+ GLRP+A
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 389 ---------------------------------TMYASLIESYTKAGKLDTALRLWDEMK 415
++ SL++ Y K G ++ A +++
Sbjct: 550 TVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG--- 606
Query: 416 KAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVD 475
+ L ++ + A G L A++++ +E G P T + +L +G ++
Sbjct: 607 -SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDIN 665
Query: 476 SAMKLYNSMTNA-GLRPGMSTYTAILTLLASKKLVDVAAKILLEM 519
A++++ + + ++P + Y ++ LLAS + A +++ EM
Sbjct: 666 QAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 140/332 (42%), Gaps = 56/332 (16%)
Query: 271 FKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAK 330
F +Q G + T+N +I L G ++ +++ M+++ + ++ M+ + +
Sbjct: 464 FYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQ 523
Query: 331 SGRLDVAFKLFQEMKERNIRPS------------------------------------FG 354
+G + A ++M+E +RP+
Sbjct: 524 NGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS 583
Query: 355 IFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEM 414
I +SLVD K G ++ A K++ G L + ++I +Y G L A+ L+ +
Sbjct: 584 IETSLVDMYAKCGDINKAEKVF----GSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Query: 415 KKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCLLEMHAASGQ 473
+ G +P+ T ++ + +G ++ A+ IF D+ K P Y ++++ A++G+
Sbjct: 640 EGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGE 699
Query: 474 VDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS------KKLVDVAAKILLEMKAMGFSVD 527
+ A++L M P I +L+AS +LVD ++ LLE +
Sbjct: 700 TEKALRLIEEM------PFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNY 753
Query: 528 VSASDVLMVYIKDGSVDLALRWLRFMDSSGIR 559
V+ S+ Y +GS D ++ M + G++
Sbjct: 754 VTISN---AYAVEGSWDEVVKMREMMKAKGLK 782
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 13/294 (4%)
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMG--KAGRLDTAMKIYM 377
++ +I + G + A F EM E I P + ++ + G K R + Y+
Sbjct: 140 SWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYV 199
Query: 378 EMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSG 437
G L + +SL + Y K G LD A +++DE+ N + ++ ++G
Sbjct: 200 VKSG--LEDCVFVASSLADMYGKCGVLDDASKVFDEIPD----RNAVAWNALMVGYVQNG 253
Query: 438 KLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYT 497
K + A+ +F+DM K G PT T S L A G V+ + + G+ T
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 498 AILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMV-YIKDGSVDLALRWLRFMDSS 556
++L L++ A + M F DV ++++ Y++ G V+ A+ + M
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 557 GIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRC 610
++ + + L + + + K + + + + D+VL ++++ +C
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC 423
>AT4G35850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16983638-16986681 FORWARD
Length = 444
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%)
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+E+ +RN +++ V+S+ R +Y +M+ G++P+A ++ S + K
Sbjct: 30 EEIAKRNYANDLSEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKG 89
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
+L A +EMK G P+ LY ++ + K A+ ++++M++ P T+
Sbjct: 90 ARLSDAFFFREEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTF 149
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
CLL A SGQ+D + MT AG+ Y ++T +K+
Sbjct: 150 VCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNKQ 195
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIY 376
D S Y + S+ R + ++ +MK ++P+ IF S V K RL A
Sbjct: 40 DLSEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFR 99
Query: 377 MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKS 436
EM+ G+ P +Y LI + K A+R++DEMK+ +PN + ++ + A S
Sbjct: 100 EEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVS 159
Query: 437 GKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMH 468
G+LD +I DM AG Y+ L+ H
Sbjct: 160 GQLDLVYAIVRDMTAAGVGLNQFCYAGLITAH 191
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 15/257 (5%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D YN + + Y ++Y+ M+ + + + K RL AF
Sbjct: 40 DLSEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFR 99
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
+EMK I P +++ L+ + GK A+++Y EM+ + ++P+ + L+ + +
Sbjct: 100 EEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVS 159
Query: 402 GKLDTALRLWDEMKKAGFRPNY----GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
G+LD + +M AG N GL T + + L T + F + K
Sbjct: 160 GQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNKQPRPDNLSTKILEFVEQSKGWSAID 219
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYN------SMTNAGLRPGMSTYTAILTLLASKKLVDV 511
S S M + S + +LYN S L+ ++ Y + LA K V
Sbjct: 220 SSRKSAEDVMFSISEE-----ELYNIPTADYSHRTRFLQRNLTVYHVAFSALADLKDVKA 274
Query: 512 AAKILLEMKAMGFSVDV 528
+L +K G D
Sbjct: 275 TEALLEMLKKDGKDTDT 291
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 149/324 (45%), Gaps = 12/324 (3%)
Query: 260 KAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSS 319
KA E A F++++ G + D + +I ++ G + ++ M S D
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVV 293
Query: 320 TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM 379
+ +MI K G VA + F M++ +++ + S++ ++G LD + ++ E
Sbjct: 294 AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA 353
Query: 380 RGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKL 439
GL + + +SL+ Y+K K++ A ++++ +++ N + ++ A +G+
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE----KNDVFWNAMIRGYAHNGES 409
Query: 440 DTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAI 499
M +F DM+ +G+ T++ LL AAS ++ + ++ + L + A+
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNAL 469
Query: 500 LTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIR 559
+ + A ++ A +I + M +V+ + ++ Y++D + A + M+ GI
Sbjct: 470 VDMYAKCGALEDARQIF---ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 560 TNNFIIRQLFESCMK-NGLYESAK 582
++ + ++C +GLY+ +
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQ 550
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/325 (17%), Positives = 142/325 (43%), Gaps = 13/325 (4%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
D +N++++++ + G P K + S+ Q + T+ +++ + A+ ++ ++
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKA 401
M + + + +LVD K R+ A +++ + + P+ + L Y KA
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSGYVKA 239
Query: 402 GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTY 461
G + A+ +++ M+ G RP++ + ++ + + GKL A +F +M P +
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAW 295
Query: 462 SCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA 521
+ ++ H G A++ + +M + ++ ST ++L+ + +D+ + E
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 522 MGFSVDV-SASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYES 580
+G + ++ S ++ +Y K ++ A + ++ N+ + NG
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE----EKNDVFWNAMIRGYAHNGESHK 411
Query: 581 AKPLLETYVNSAAKVDLVLYTSILA 605
L +S +D +TS+L+
Sbjct: 412 VMELFMDMKSSGYNIDDFTFTSLLS 436
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 81/182 (44%), Gaps = 4/182 (2%)
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
M+ +++G + A K ++EM+ + P F +++ L I+ +
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
+LI+ Y K G + + +++DEM++ R N + ++ AK+G + A+
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR---RSNVVSWNSLINGYAKNGYAEDAL 819
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA-GLRPGMSTYTAILTL 502
IF+ M ++ +P T+ +L + +G+V K++ M G+ + ++ L
Sbjct: 820 KIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDL 879
Query: 503 LA 504
L
Sbjct: 880 LG 881
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 155/393 (39%), Gaps = 61/393 (15%)
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
+N +I + E AF FK++ G D + + + Y+ +++
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH--CL 554
Query: 311 AAQCSLDSS--TYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGR 368
+ +C LD T +I +K G + A K+F + E ++ + +
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-----SQNN 609
Query: 369 LDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPN---YGL 425
L+ A+ ++ EM G+ PS +A+++E+ K L + ++ K GF G+
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 426 YTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPST---YSCLLEMHAASGQVDSAMKLYN 482
L + N++ + A ++F++ L +P + ++ ++ H+ +G + A+K Y
Sbjct: 670 SLLGMYMNSRG--MTEACALFSE------LSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721
Query: 483 SMTNAGLRPGMSTYTAILTL--------------------------LASKKLVDVAAKIL 516
M + G+ P +T+ +L + L S L+D+ AK
Sbjct: 722 EMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC- 780
Query: 517 LEMKAMGFSVD--------VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQL 568
+MK D VS + ++ Y K+G + AL+ M S I + +
Sbjct: 781 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 840
Query: 569 FESCMKNGLYESAKPLLETYVNS---AAKVDLV 598
+C G + + E + A+VD V
Sbjct: 841 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV 873
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 130/271 (47%), Gaps = 13/271 (4%)
Query: 285 TYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEM 344
++N +++ ++ G+ ++ +++SM D ++ M+ A+ G L A ++E
Sbjct: 115 SWNNMVSGYVKSGMLVRARVVFDSMP----ERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
+ I+ + F+ L+ + K+ +L + + ++ G + + S+I++Y K G++
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
++A R +DEM + ++T ++ AK G ++ A +F +M + P +++ L
Sbjct: 231 ESAKRCFDEMTV----KDIHIWTTLISGYAKLGDMEAAEKLFCEMPE----KNPVSWTAL 282
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
+ + G + A+ L+ M G++P T+++ L AS + +I M
Sbjct: 283 IAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNV 342
Query: 525 SVD-VSASDVLMVYIKDGSVDLALRWLRFMD 554
+ + S ++ +Y K GS++ + R R D
Sbjct: 343 RPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 30/261 (11%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
+I AK ++E A CF ++ D + LI+ + G MEAA+
Sbjct: 220 IIDAYAKCGQMESAKRCFDEMTVK----DIHIWTTLISGYAKLG----------DMEAAE 265
Query: 314 ---CSL---DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAG 367
C + + ++ +I + G + A LF++M ++P FSS + +
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 368 RLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA---LRLWDEMKKAGFRPNYG 424
L +I+ M +RP+A + +SLI+ Y+K+G L+ + R+ D+ F
Sbjct: 326 SLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF----- 380
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
+ ++ + A+ G A+ + +DM K P +T +L + SG V+ ++ + SM
Sbjct: 381 -WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESM 439
Query: 485 T-NAGLRPGMSTYTAILTLLA 504
T G+ P Y ++ LL
Sbjct: 440 TVQHGIVPDQEHYACLIDLLG 460
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 324 MIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFG 383
+I K G+ A K+F +M RN+ ++++V K+G L A ++ M
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYS----WNNMVSGYVKSGMLVRARVVFDSMP--- 140
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
+ +++ Y + G L AL + E +++G + N + ++ + KS +L
Sbjct: 141 -ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
+ AGFL +++ +A GQ++SA + ++ MT + +T +++
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLISGY 255
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNF 563
A ++ A K+ EM VS + ++ Y++ GS + AL R M + G++ F
Sbjct: 256 AKLGDMEAAEKLFCEMPEKN---PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQF 312
Query: 564 IIRQLFESCM 573
F SC+
Sbjct: 313 T----FSSCL 318
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 18/283 (6%)
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGL-RPS 387
A L A + + ++ IR F + +SL+ G L I+ ++ G RP+
Sbjct: 22 ATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPN 81
Query: 388 ATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFN 447
+ LI Y K GK A +++D+M R Y + +V KSG L A +F+
Sbjct: 82 TLLSNHLIGMYMKCGKPIDACKVFDQMH---LRNLYS-WNNMVSGYVKSGMLVRARVVFD 137
Query: 448 DMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKK 507
M + + +++ ++ +A G + A+ Y +G++ ++ +LT +
Sbjct: 138 SMPERDVV----SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR 193
Query: 508 LVDVAAKILLEMKAMGFSVDVSAS-DVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIR 566
+ + + ++ GF +V S ++ Y K G ++ A R M I I
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWT 249
Query: 567 QLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
L K G E+A+ L + + V +T+++A VR
Sbjct: 250 TLISGYAKLGDMEAAEKLF----CEMPEKNPVSWTALIAGYVR 288
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 160/360 (44%), Gaps = 29/360 (8%)
Query: 253 RVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAA 312
++I L+ + LA F +VQ + + N+LI PY++F ++ M+
Sbjct: 56 KLISALSLCRQTNLAVRVFNQVQ----EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF 111
Query: 313 QCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT- 371
D+ TY ++ + + L V + +++ + + ++L+D + G L
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVR 171
Query: 372 -AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL--YTL 428
AMK++ +M + S++ KAG+L A RL+DEM P L +
Sbjct: 172 DAMKLFEKMS----ERDTVSWNSMLGGLVKAGELRDARRLFDEM------PQRDLISWNT 221
Query: 429 IVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAG 488
+++ A+ ++ A +F M + + ++S ++ ++ +G ++ A +++ M
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKMPLPA 277
Query: 489 LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSAS-DVLMVYIKDGSVDLAL 547
+ T+T I+ A K L+ A +++ +M A G D +A +L + G + L +
Sbjct: 278 --KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 548 RWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHL 607
R + S + +N +++ L + K G + A + N K DLV + ++L L
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF----NDIPKKDLVSWNTMLHGL 391
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 143/351 (40%), Gaps = 47/351 (13%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
+ D + R+ LF++M + ++ +++ ++ +KA +E+A F K+
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTV-------SWSTMVMGYSKAGDMEMARVMFDKMP 274
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
V T+ +I + KGL ++ + + M A+ D++ ++ + +SG L
Sbjct: 275 LPAKNV--VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLS 332
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD------------------------- 370
+ ++ +K N+ + + ++L+D K G L
Sbjct: 333 LGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLG 392
Query: 371 ------TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKA-GFRPNY 423
A++++ MR G+RP + +++ S AG +D + + M+K P
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQV 452
Query: 424 GLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
Y +V+ + G+L A+ + M P + LL +VD A ++ ++
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPME---PNVVIWGALLGACRMHNEVDIAKEVLDN 509
Query: 484 MTNAG-LRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDV 533
+ PG Y+ + + A+ + + A I +MK+MG AS V
Sbjct: 510 LVKLDPCDPG--NYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSV 558
>AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11938265-11939653 REVERSE
Length = 462
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 8/240 (3%)
Query: 258 LAKAEKLELAFCCFKKVQGSGGKVDT-QTYNALITLFLNKGLPYKSFEIYESMEAAQ-CS 315
L + +++ELA F + SG V T + ++T+ G ++ E+ E M +
Sbjct: 184 LKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVK 243
Query: 316 LDSSTYELMIPSLAKS---GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTA 372
+ T++ MI K LD+ KL M++ ++ + L+D G+++ A
Sbjct: 244 ANIVTFKSMIGCCVKRWDFEELDLVLKL---MEKESVMLDLDSYKVLIDGFTSYGKVEEA 300
Query: 373 MKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVES 432
++ + M LR + +Y ++ Y++ G ++ + L+ EM G PN Y +++
Sbjct: 301 ERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNG 360
Query: 433 NAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
K+GK+ AMS N++ F YS L E G +D ++++ M G PG
Sbjct: 361 LCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPG 420
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 116/258 (44%), Gaps = 10/258 (3%)
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
G KV + +N++I ++ + G + E++E M+ + +D T L + +L + +++
Sbjct: 132 GCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQME 191
Query: 336 VAFKLFQEMKERNIRP-SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGF--GLRPSATMYA 392
+A F M E I + + +V + G + A ++ EM G G++ + +
Sbjct: 192 LARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEM-GLVKGVKANIVTFK 250
Query: 393 SLIESYTKA---GKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
S+I K +LD L+L M+K + Y ++++ GK++ A + M
Sbjct: 251 SMIGCCVKRWDFEELDLVLKL---MEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMM 307
Query: 450 EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLV 509
Y+ ++ ++ G V+ ++LY+ M++ G+ P TY ++ L V
Sbjct: 308 HDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKV 367
Query: 510 DVAAKILLEMKAMGFSVD 527
A L E++ F +D
Sbjct: 368 CEAMSFLNELRVNEFEID 385
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 123/284 (43%), Gaps = 4/284 (1%)
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
++G + AF++ M I S ++S LV ++G A+ ++ +M G P+
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
Y SLI+ + G +D A + +++ G P+ L L++ + + G+ + A +F
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS 342
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
+EK +P T++ +L SG+ D ++ + + G + T + +
Sbjct: 343 LEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGY 399
Query: 509 VDVAAKILLEMKAMGFSVDVSASDV-LMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQ 567
A K+L M F++D V L + G+ A++ + + +
Sbjct: 400 NSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSA 459
Query: 568 LFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQ 611
+ +S ++ G Y +A L + + +D+V YT + LVR +
Sbjct: 460 IIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAK 503
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 143/341 (41%), Gaps = 9/341 (2%)
Query: 272 KKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKS 331
++++ SG ++ + + L+ +F + K+ E+Y M + ++ +M+ K
Sbjct: 97 ERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKL 156
Query: 332 GRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
++ A ++F+ ++ RN SF I S S G G L + M G G P+ +
Sbjct: 157 NVVNGALEIFEGIRFRNF-FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERF 215
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEK 451
++ + G + A ++ M +G + +++++V +SG+ A+ +FN M +
Sbjct: 216 GQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQ 275
Query: 452 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDV 511
G P TY+ L++ G VD A + + + + GL P + ++ +
Sbjct: 276 IGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEE 335
Query: 512 AAKILLEMKAMGFSVD-VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTN-NFIIRQLF 569
A K+ ++ D + + +L G DL R + GI T+ + + L
Sbjct: 336 ARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI-----THGIGTDFDLVTGNLL 390
Query: 570 ESCMKNGLYES-AKPLLETYVNSAAKVDLVLYTSILAHLVR 609
+C Y S A +L +D YT L+ L R
Sbjct: 391 SNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 133/319 (41%), Gaps = 37/319 (11%)
Query: 244 GIS-SFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKS 302
GIS S + ++ ++ ++ + + A F K+ G + TY +LI F++ G+ ++
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 303 FEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDS 362
F + +++ + D LMI + + GR + A K+F +++R + P F+S++ S
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 363 MGKAGRLDTAMKI----------------------------------YMEMRGFGLRPSA 388
+ +G+ D +I M + F L
Sbjct: 362 LCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL--DC 419
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
Y + + + G A++++ + K + ++ I++S + GK +TA+ +F
Sbjct: 420 YTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKR 479
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKL 508
+ +Y+ ++ + +++ A L M G+ P TY I++ L +K
Sbjct: 480 CILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKE 539
Query: 509 VDVAAKILLEMKAMGFSVD 527
+ KIL E G +D
Sbjct: 540 TEKVRKILRECIQEGVELD 558
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 76/186 (40%)
Query: 275 QGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRL 334
G G D T N L F G + ++ M +LD TY + + +L + G
Sbjct: 376 HGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP 435
Query: 335 DVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASL 394
A K+++ + + S+++DS+ + G+ +TA+ ++ Y
Sbjct: 436 RAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVA 495
Query: 395 IESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGF 454
I+ +A +++ A L +MK+ G PN Y I+ K + + I + + G
Sbjct: 496 IKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Query: 455 LPTPST 460
P+T
Sbjct: 556 ELDPNT 561
>AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19763152-19765136 FORWARD
Length = 495
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/338 (17%), Positives = 143/338 (42%), Gaps = 16/338 (4%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
++++ +++ + Q WY PN Y+ L L + + + LF EM+ + + + +
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGC---VVNHEV 187
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGG-KVDTQTYNALITLFLNKGLPYKSFEIYESM 309
Y ++ +++ + + AF ++++ S + D TY+ LI FL K ++ M
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM 247
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
++ T+ +++ L Q + E + +P +S + + G G++
Sbjct: 248 RRQGIRPNTITF------------VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 295
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+ Y + + G+ P+ + L++SY K+G + + M+K + Y ++
Sbjct: 296 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVV 355
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+++ ++G L +F M+ P+ T L+ + + + D + + N+ +
Sbjct: 356 IDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDI 415
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD 527
R + + ++ + +L M+ GF D
Sbjct: 416 RLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPD 453
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 130/312 (41%), Gaps = 17/312 (5%)
Query: 178 THILQALKIVNDIDASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMV 237
T ++ A DA+ +L + K P+ Y +L + Q FD +Q L +M
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 238 QDSSKDGISSF-DAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNK 296
+ + +F + + +IQ L + + C K D+ T N+ + F
Sbjct: 249 RQGIRPNTITFVEMESTLIQMLGEDD-------C---------KPDSWTMNSTLRAFGGN 292
Query: 297 GLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIF 356
G YE +++ + T+ +++ S KSG + + M++ + + +
Sbjct: 293 GQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTY 352
Query: 357 SSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKK 416
+ ++D+ G+AG L ++ M+ + PS SL+ +Y +A K D + ++
Sbjct: 353 NVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIEN 412
Query: 417 AGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDS 476
+ R + + +V++ + K + MEK GF P TY +++ + SG
Sbjct: 413 SDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTH 472
Query: 477 AMKLYNSMTNAG 488
+L+ + + G
Sbjct: 473 VKELHGVVESVG 484
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 131/298 (43%), Gaps = 26/298 (8%)
Query: 333 RLDVAFKLFQEMKERN-IRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMY 391
R + A ++F+ ++E+ +P+ GI+ L+ +GK + + A +++ EM G + +Y
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 392 ASLIESYTKAGKLDTALRLWDEMKKA-GFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME 450
+L+ +Y+++G+ D A L + MK + +P+ Y+++++S + D + +DM
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 451 KAGFLPTPSTY----SCLLEM-------------------HAASGQVDSAMKLYNSMTNA 487
+ G P T+ S L++M +GQ++ Y ++
Sbjct: 249 RQGIRPNTITFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSS 308
Query: 488 GLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLA 546
G+ P + T+ +L + ++ M+ +S + +V++ + + G +
Sbjct: 309 GIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQM 368
Query: 547 LRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSIL 604
R M S I + + L + + + +L NS ++DLV + ++
Sbjct: 369 EYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLV 426
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 13/264 (4%)
Query: 366 AGRLDTAMKIYMEMR-GFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYG 424
A R ++A++++ +R +P+ +Y LI K + + A L+ EM G N+
Sbjct: 127 ALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHE 186
Query: 425 LYTLIVESNAKSGKLDTAMSIFNDMEKA-GFLPTPSTYSCLLEMHAASGQVDSAMKLYNS 483
+YT +V + ++SG+ D A ++ M+ + P TYS L++ D L +
Sbjct: 187 VYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSD 246
Query: 484 MTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSV 543
M G+RP T+ + + L ++L E S ++++ L + +G +
Sbjct: 247 MRRQGIRPNTITFVEMESTLI---------QMLGEDDCKPDSWTMNST--LRAFGGNGQI 295
Query: 544 DLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSI 603
++ SSGI N L +S K+G Y+ ++E +V Y +
Sbjct: 296 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVV 355
Query: 604 LAHLVRCQEEQNERHLMLILGATR 627
+ R + + +L ++ + R
Sbjct: 356 IDAFGRAGDLKQMEYLFRLMQSER 379
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 126/271 (46%), Gaps = 11/271 (4%)
Query: 254 VIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQ 313
+I AK ++++L CF+ G+ K T ++A+I + L + +++ M
Sbjct: 360 LISMYAKCKRVDL---CFRVFSGAS-KYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED 415
Query: 314 CSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAM 373
+ +T ++P+ A L A + + + S + LV K G L++A
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 374 KIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESN 433
KI+ ++ ++ +LI Y G AL+++ EM ++G PN +T + +
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Query: 434 AKSGKLDTAMSIFNDM-EKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPG 492
+ SG ++ +++F M E L + Y+C++++ +G++D A YN +T P
Sbjct: 536 SHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEA---YNLITTIPFEPT 592
Query: 493 MSTYTAILTLLASK---KLVDVAAKILLEMK 520
+ + A+L + +L ++AA L E++
Sbjct: 593 STVWGALLAACVTHENVQLGEMAANKLFELE 623
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 162/395 (41%), Gaps = 28/395 (7%)
Query: 232 LFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGS--GGKVDTQTYNAL 289
+FD MV +S ++ + V +L + LE+ K V+ G K++ + NAL
Sbjct: 205 MFDWMVNESVDLDHATIVSMLPVCGHL---KDLEMGRNVHKLVEEKRLGDKIEVK--NAL 259
Query: 290 ITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNI 349
+ ++L G ++ +++ ME D T+ MI + G ++ A +L + M+ +
Sbjct: 260 VNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 350 RPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA----TMYASLIESYTKAGKLD 405
RP+ +SLV G A +++ ++ G+ +R + SLI Y K ++D
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLH----GWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
R++ K P ++ I+ ++ + A+ +F M + P +T + LL
Sbjct: 372 LCFRVFSGASKYHTGP----WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
+AA + AM ++ +T G + T ++ + + ++ A KI ++ S
Sbjct: 428 PAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 526 VDVSASDVLMV-YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
DV L+ Y G AL+ M SG+ N +C +GL E L
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Query: 585 ----LETYVNSAAKVDLVLYTSILAHLVRCQEEQN 615
LE Y A +L R E N
Sbjct: 548 FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 127/293 (43%), Gaps = 16/293 (5%)
Query: 227 DAIQSLFDEMVQDSSK---DGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDT 283
DAI S+F MV + K DG + Y V + + + ++L ++ S D
Sbjct: 98 DAI-SVFIRMVSEGVKCVPDGYT----YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK 152
Query: 284 QTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQE 343
NAL+ +++N G + ++++ M+ + D ++ MI ++G ++ A +F
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMK----NRDVISWNTMISGYYRNGYMNDALMMFDW 208
Query: 344 MKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGK 403
M ++ S++ G L+ ++ + L + +L+ Y K G+
Sbjct: 209 MVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR 268
Query: 404 LDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSC 463
+D A ++D M+ R + +T ++ + G ++ A+ + M+ G P T +
Sbjct: 269 MDEARFVFDRME----RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIAS 324
Query: 464 LLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKIL 516
L+ + + +V+ L+ + + T+++++ A K VD+ ++
Sbjct: 325 LVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVF 377
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 112/244 (45%), Gaps = 11/244 (4%)
Query: 286 YNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMK 345
+NA+I+ + G ++ +++ M D+ + I + A+ G L+ A +++ +
Sbjct: 291 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350
Query: 346 ERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLD 405
+ R I S+L+D K G ++ A ++ L +++++I Y G+
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT----LDRDVVVWSAMIVGYGLHGRAR 406
Query: 406 TALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLL 465
A+ L+ M++ G PN + ++ + SG + FN M P Y+C++
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVI 466
Query: 466 EMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFS 525
++ +G +D A ++ M ++PG++ + A+L+ + V++ ++ FS
Sbjct: 467 DLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALLSACKKHRHVELGEYAAQQL----FS 519
Query: 526 VDVS 529
+D S
Sbjct: 520 IDPS 523
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 134/300 (44%), Gaps = 9/300 (3%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G D N LI L+ + ++E + + ++ S T ++ + A++G A
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT--AIVSAYAQNGEPMEA 206
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
++F +M++ +++P + S++++ L I+ + GL + SL
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
Y K G++ TA L+D+MK PN L+ ++ AK+G A+ +F++M P
Sbjct: 267 YAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
+ + + A G ++ A +Y + + R + +A++ + A V+ A+++
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVE-GARLVF 381
Query: 518 EMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGL 577
+ + + V V S +++ Y G A+ R M+ G+ N+ L +C +G+
Sbjct: 382 D-RTLDRDV-VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 108/244 (44%), Gaps = 9/244 (3%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
SG +D NALI ++ G S +I+ SM D+ T+ +I + + G
Sbjct: 437 SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG----DTVTWNTVISACVRFGDFAT 492
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
++ +M++ + P F + +I+ + FG + +LIE
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
Y+K G L+ + R+++ M R + +T ++ + G+ + A+ F DMEK+G +P
Sbjct: 553 MYSKCGCLENSSRVFERMS----RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 457 TPSTYSCLLEMHAASGQVDSAMKLYNSM-TNAGLRPGMSTYTAILTLLASKKLVDVAAKI 515
+ ++ + SG VD + + M T+ + P + Y ++ LL+ + + A +
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 516 LLEM 519
+ M
Sbjct: 669 IQAM 672
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/387 (17%), Positives = 161/387 (41%), Gaps = 21/387 (5%)
Query: 235 EMVQDSSKDGISSFDAY-------NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYN 287
EMV++S + + + D + + V++ L LA + + +G +++ N
Sbjct: 287 EMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 346
Query: 288 ALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER 347
LI ++ G + +++ SME D+ ++ +I +SG L A KLF+ M
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECK----DTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA 407
+ + L+ + L ++ G+ ++ +LI+ Y K G++ +
Sbjct: 403 EEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEM 467
L+++ M + + ++ + + G T + + M K+ +P +T+ L M
Sbjct: 463 LKIFSSMGTG----DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 468 HAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVD 527
A+ +++ + G + A++ + + ++ ++++ M
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV--- 575
Query: 528 VSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLET 587
V+ + ++ Y G + AL M+ SGI ++ + + +C +GL + E
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK 635
Query: 588 YVNSAAKVDLVL--YTSILAHLVRCQE 612
+ + K+D ++ Y ++ L R Q+
Sbjct: 636 -MKTHYKIDPMIEHYACVVDLLSRSQK 661
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 161/411 (39%), Gaps = 11/411 (2%)
Query: 250 AYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESM 309
A++ V+ K E LE+ V G DT NAL++L+ + G + I+ +M
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 310 EAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRL 369
D+ TY +I L++ G + A +LF+ M + P +SLV + G L
Sbjct: 350 SQR----DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 370 DTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
+++ G + + +L+ Y K ++TAL + E + N L+ ++
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV----ENVVLWNVM 461
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + L + IF M+ +P TY +L+ G ++ ++++ +
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRW 549
+ + ++ + A +D A IL+ VS + ++ Y + D AL
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV---VSWTTMIAGYTQYNFDDKALTT 578
Query: 550 LRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVR 609
R M GIR++ + +C + + + S DL +++ R
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSR 638
Query: 610 CQEEQNERHLMLILGATRHKAHKFMCGLFTGPEQRKQPVLSFVREFFQGID 660
C + + A + A + F ++ + FVR +GID
Sbjct: 639 CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 132/298 (44%), Gaps = 15/298 (5%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N ++ ++ K+E ++ F++ + D +NAL++ F G ++ ++ M
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAG----DNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
++ T+ + + +++ + ++ + + + ++L+ K G +
Sbjct: 686 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 745
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
A K ++E+ + + ++I +Y+K G AL +D+M + RPN+ ++
Sbjct: 746 AEKQFLEVS----TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
Query: 432 SNAKSGKLDTAMSIFNDME-KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR 490
+ + G +D ++ F M + G P P Y C+++M +G + A + M ++
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP---IK 858
Query: 491 PGMSTYTAILTLLASKKLVDV---AAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDL 545
P + +L+ K +++ AA LLE++ + V S++ V K + DL
Sbjct: 859 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 916
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 143/316 (45%), Gaps = 16/316 (5%)
Query: 230 QSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNAL 289
+ +F M Q +D ++ YN +I L++ E A FK++ G + D+ T +L
Sbjct: 343 EHIFSNMSQ---RDAVT----YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 290 ITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNI 349
+ G ++ +++ + ++ ++ AK ++ A F E + N+
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 350 RPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALR 409
+++ ++ + G L + +I+ +M+ + P+ Y S++++ + G L+ +
Sbjct: 456 V----LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 410 LWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHA 469
+ ++ K F+ N + +++++ AK GKLDTA I + AG +++ ++ +
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL--IRFAG--KDVVSWTTMIAGYT 567
Query: 470 ASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDVS 529
D A+ + M + G+R T ++ A + + +I + GFS D+
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 530 ASDVLM-VYIKDGSVD 544
+ L+ +Y + G ++
Sbjct: 628 FQNALVTLYSRCGKIE 643
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 122/302 (40%), Gaps = 11/302 (3%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G + T N LI L+ G + +++ + D S++ MI L+K+ A
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK----DHSSWVAMISGLSKNECEAEA 272
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
+LF +M I P+ FSS++ + K L+ +++ + G + +L+
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
Y G L +A ++ M + + Y ++ ++ G + AM +F M G P
Sbjct: 333 YFHLGNLISAEHIFSNMSQ----RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
+T + L+ +A G + +L+ T G A+L L A ++ A L
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 518 EMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGL 577
E + V + +L+ Y + + R R M I N + + ++C++ G
Sbjct: 449 ETEVENV---VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 578 YE 579
E
Sbjct: 506 LE 507
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 137/291 (47%), Gaps = 17/291 (5%)
Query: 288 ALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER 347
A+I ++ +G K+ +++ ME +S T+ MI +SG++D A K+F +M ER
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDK----NSVTWNTMIDGYMRSGQVDNAAKMFDKMPER 169
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA 407
++ ++++++ K G + A+ + EM+ G++P + + + T G L
Sbjct: 170 DLIS----WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFG 225
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEM 467
L + + F+ N + +++ + G ++ A +F +MEK T +++ ++
Sbjct: 226 LWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK----RTVVSWNSVIVG 281
Query: 468 HAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKA-MGFSV 526
AA+G ++ + M G +P T+T LT + LV+ + MK S
Sbjct: 282 FAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISP 341
Query: 527 DVSASDVLM-VYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNG 576
+ L+ +Y + G ++ AL+ ++ M ++ N +I L +C +G
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMP---MKPNEVVIGSLLAACSNHG 389
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 102/223 (45%), Gaps = 18/223 (8%)
Query: 280 KVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFK 339
K + + N+LI L+ G + +++ +ME ++ +I A +G +
Sbjct: 238 KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV----SWNSVIVGFAANGNAHESLV 293
Query: 340 LFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMR-GFGLRPSATMYASLIESY 398
F++M+E+ +P F+ + + G ++ ++ + M+ + + P Y L++ Y
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLY 353
Query: 399 TKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGK----LDTAMSIFNDMEKAGF 454
++AG+L+ AL+L M +PN + ++ + + G + M D+
Sbjct: 354 SRAGRLEDALKLVQSMP---MKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLN---- 406
Query: 455 LPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR--PGMST 495
+ + S Y L M+AA G+ + A K+ M GL+ PG S+
Sbjct: 407 VKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSS 449
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 141/335 (42%), Gaps = 60/335 (17%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
++ T+N +I ++ G + ++++ M D ++ MI K G + A F
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMP----ERDLISWTAMINGFVKKGYQEEALLWF 194
Query: 342 QEMKERNIRP------------------SFGIF-----------------SSLVDSMGKA 366
+EM+ ++P SFG++ +SL+D +
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 367 GRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLY 426
G ++ A +++ M + + + S+I + G +L + +M++ GF+P+ +
Sbjct: 255 GCVEFARQVFYNME----KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTF 310
Query: 427 TLIVESNAKSGKLDTAMSIFNDMEKAGFLPTP--STYSCLLEMHAASGQVDSAMKLYNSM 484
T + + + G ++ + F M K + +P Y CL+++++ +G+++ A+KL SM
Sbjct: 311 TGALTACSHVGLVEEGLRYFQIM-KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Query: 485 TNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSVDV---SASDVLMV---YI 538
P I +LLA+ + I+L + M D+ S S+ +++ Y
Sbjct: 370 ------PMKPNEVVIGSLLAA--CSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYA 421
Query: 539 KDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCM 573
DG + A + R M G++ + CM
Sbjct: 422 ADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
>AT5G36300.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G42310.1). |
chr5:14320668-14322398 FORWARD
Length = 284
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 279 GKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAF 338
G + YNAL++ +L K + S+ + M+ + L+S Y +I +G A
Sbjct: 49 GSYSVRLYNALVSRYLRKEV---SWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKAL 105
Query: 339 KLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMK---------IYMEMRGFGLRPSAT 389
+ +E++E + I++S++D+ GK G LD ++ + +++ G+ PSA
Sbjct: 106 GIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSAN 165
Query: 390 MYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDM 449
++ +L +Y + G +++ M+ G PN + +++ + +GK A+SI++ +
Sbjct: 166 LFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHI 225
Query: 450 EKAGFL-PTPSTYSCLLE 466
++ ++ P TYS L++
Sbjct: 226 KETVWIHPDVVTYSTLMK 243
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 10/185 (5%)
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
R +V++++ EMK+R R + ++ ++ G A+ I E+R GL +Y
Sbjct: 65 RKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYN 124
Query: 393 SLIESYTKAGKLDTALR---------LWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
S+I+++ K G+LD L+ L ++K G P+ L+ + + A+ G +
Sbjct: 125 SVIDTFGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTV 184
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM-TNAGLRPGMSTYTAILTL 502
+ ME G P + L+ +G+ A+ +Y+ + + P + TY+ ++
Sbjct: 185 KVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKA 244
Query: 503 LASKK 507
K
Sbjct: 245 FTRAK 249
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 40/285 (14%)
Query: 329 AKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSA 388
AK G L+ A K+F++M +R+ F +++L+ + R A+ + +M FG P+
Sbjct: 106 AKCGSLEEARKVFEKMPQRD----FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNE 161
Query: 389 TMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFND 448
+S+I++ + +L K GF N + + +++ + G +D A +F+
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 449 MEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS--- 505
+E +++ L+ HA + A++L+ M G RP +Y ++ +S
Sbjct: 222 LESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 506 ---------------KKLVDVAAKILLEMKAMGFSVD--------------VSASDVLMV 536
+KLV A LL+M A S+ VS + +L
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 537 YIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESA 581
Y + G A+ W M GIR N + +C +GL +
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 120/266 (45%), Gaps = 22/266 (8%)
Query: 277 SGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDV 336
SG K+ N L+ ++ G + + +I++ + D ++ ++ + A+ G
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL----AKRDVVSWNSLLTAYAQHGFGKE 346
Query: 337 AFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIE 396
A F+EM+ IRP+ F S++ + +G LD Y M+ G+ P A Y ++++
Sbjct: 347 AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVD 406
Query: 397 SYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLP 456
+AG L+ ALR +EM P ++ ++ NA +T + + P
Sbjct: 407 LLGRAGDLNRALRFIEEMP---IEPTAAIWKALL--NACRMHKNTELGAYAAEHVFELDP 461
Query: 457 -TPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLR--PGMS---TYTAILTLLASK---- 506
P + L ++A+ G+ + A ++ M +G++ P S AI +A+
Sbjct: 462 DDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHP 521
Query: 507 KLVDVAAK---ILLEMKAMGFSVDVS 529
+ ++A K +L ++K +G+ D S
Sbjct: 522 QREEIARKWEEVLAKIKELGYVPDTS 547
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 7/212 (3%)
Query: 384 LRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM 443
R M +L+ Y K G L+ A +++++M + F +T ++ ++ + A+
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVT----WTTLISGYSQHDRPCDAL 146
Query: 444 SIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLL 503
FN M + G+ P T S +++ AA + +L+ G + +A+L L
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 504 ASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNF 563
L+D A L A+ DVS + ++ + + + AL + M G R ++F
Sbjct: 207 TRYGLMDDAQ---LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHF 263
Query: 564 IIRQLFESCMKNGLYESAKPLLETYVNSAAKV 595
LF +C G E K + + S K+
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 128/310 (41%), Gaps = 17/310 (5%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N ++ AK LE A F+K+ + D T+ LI+ + P + + M
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMP----QRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
S + T +I + A R +L + + + S+L+D + G +D
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 372 AMKIY--MEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 429
A ++ +E R + + +LI + + + AL L+ M + GFRP++ Y +
Sbjct: 215 AQLVFDALESR------NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 489
+ + +G L+ + M K+G + LL+M+A SG + A K+++ +
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA---- 324
Query: 490 RPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGFSV-DVSASDVLMVYIKDGSVDLALR 548
+ + ++ ++LT A A EM+ +G ++S VL G +D
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 549 WLRFMDSSGI 558
+ M GI
Sbjct: 385 YYELMKKDGI 394
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 125/270 (46%), Gaps = 14/270 (5%)
Query: 191 DASLSLYKWAKRQSWYVPNEECYLLLFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDA 250
+ +L L++ R + P+ Y LF A + + + + + M++ K + +F A
Sbjct: 244 EKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK--LVAF-A 299
Query: 251 YNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESME 310
N ++ AK+ + A F ++ K D ++N+L+T + G ++ +E M
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRL----AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 311 AAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLD 370
+ ++ ++ + + SG LD + ++ MK+ I P + ++VD +G+AG L+
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 371 TAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNY-GLYTLI 429
A++ EM + P+A ++ +L+ + + K +T L + P+ G + ++
Sbjct: 416 RALRFIEEM---PIEPTAAIWKALLNA-CRMHK-NTELGAYAAEHVFELDPDDPGPHVIL 470
Query: 430 VESNAKSGKLDTAMSIFNDMEKAGFLPTPS 459
A G+ + A + M+++G P+
Sbjct: 471 YNIYASGGRWNDAARVRKKMKESGVKKEPA 500
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G K+D +LI L++ G K+F+++ ++ D+ +Y MI +G A
Sbjct: 630 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAMIMGCGINGMATEA 685
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
LF M E+ I P+ F+ L+ + +G + K + M+ L PSA Y +++
Sbjct: 686 NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDM 745
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI-----VESNAKSGKLDTAMSIFNDMEKA 452
+AG+L+ A L +K +PN G++ + + +N + G++ + + + +
Sbjct: 746 LGRAGRLEEAYEL---IKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPT 802
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
G+L S L ++++ G+ D A + +S+ L G + LA K++D +
Sbjct: 803 GYL------SHLAMIYSSVGRWDDARTVRDSIKEKKLSVG--------SFLAGSKIIDRS 848
Query: 513 AKI 515
++I
Sbjct: 849 SRI 851
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERN--IRPSFGIFSSLVDSMGKAGRLDTAMK 374
D Y+ MI ++G+ A KLF +M ERN I+P SS+V + + G
Sbjct: 562 DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW 621
Query: 375 IYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNA 434
+ + G++ + SLI+ Y K G A +++ + K + Y+ ++
Sbjct: 622 VESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAMIMGCG 677
Query: 435 KSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMS 494
+G A S+F M + P T++ LL ++ SG V K +NSM + L P
Sbjct: 678 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSAD 737
Query: 495 TYTAILTLLASKKLVDVAAKILLEM 519
Y ++ +L ++ A +++ M
Sbjct: 738 HYGIMVDMLGRAGRLEEAYELIKSM 762
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 134/303 (44%), Gaps = 29/303 (9%)
Query: 222 QSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKV 281
+S + D + +FD++ + KD +S +N +I AK + A F +
Sbjct: 451 ESGELDEARRVFDKIPE---KDAVS----WNLIISSYAKKGDMGNACSLFSAMPLK---- 499
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLF 341
++N LI ++N + ++ + A + ++ MI K G + A +LF
Sbjct: 500 SPASWNILIGGYVN----CREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF 555
Query: 342 QEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEM--RGFGLRPSATMYASLIESYT 399
+ M +++ ++ +++ + G+ A+K++ +M R ++P +S++ + +
Sbjct: 556 RLMSKKDKL----VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS 611
Query: 400 KAGKLDTALRLWDE--MKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
+ G +T+ W E + + G + + L T +++ K G A +F+++ K +
Sbjct: 612 QLG--NTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTV-- 667
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
+YS ++ +G A L+ +M + P + T+T +L+ + LV K
Sbjct: 668 --SYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFN 725
Query: 518 EMK 520
MK
Sbjct: 726 SMK 728
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 143/349 (40%), Gaps = 52/349 (14%)
Query: 287 NALITLFLNKGLPYKSFEIYESMEAAQCSLDSS--TYELMIPSLAKSGRLDVAFKLFQEM 344
N+LI L+ G ++ ++ C D++ T+ MI S + + A LF M
Sbjct: 423 NSLIDLYGKMGDLTVAWRMF-------CEADTNVITWNAMIASYVHCEQSEKAIALFDRM 475
Query: 345 KERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKL 404
N +PS +L+ + G L+ I+ + + ++ A+LI+ Y K G L
Sbjct: 476 VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHL 535
Query: 405 DTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCL 464
+ + L+D AG + + + +++ G +++A+++F+ ME++ PT T+ L
Sbjct: 536 EKSRELFD----AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLAL 591
Query: 465 LEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILLEMKAMGF 524
L +G V+ KL+ M ++P + Y+ ++ LL+ ++ A ++ M F
Sbjct: 592 LSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP---F 648
Query: 525 SVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFIIRQLFESCMKNGLYESAKPL 584
S D I L SCM +G +E +
Sbjct: 649 SPD----------------------------------GVIWGTLLSSCMTHGEFEMGIRM 674
Query: 585 LETYVNSAAKVD--LVLYTSILAHLVRCQEEQNERHLMLILGATRHKAH 631
E V S + D ++ ++ + + +E + R +M G + H
Sbjct: 675 AERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGH 723
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 288 ALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER 347
ALI ++ G KS E+++ A D+ + +MI G ++ A LF +M+E
Sbjct: 524 ALIDMYAKCGHLEKSRELFD----AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES 579
Query: 348 NIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTA 407
+++P+ F +L+ + AG ++ K++++M + ++P+ Y+ L++ +++G L+ A
Sbjct: 580 DVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEA 639
Query: 408 LRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAM-----SIFNDMEKAGFLPTPSTYS 462
M F P+ ++ ++ S G+ + + ++ +D + G+ Y
Sbjct: 640 ESTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY------YI 690
Query: 463 CLLEMHAASGQVDSAMKLYNSMTNAGL--RPGMST 495
L M++A+G+ + A + M +G+ R G S
Sbjct: 691 MLANMYSAAGKWEEAERAREMMRESGVGKRAGHSV 725
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 106/233 (45%), Gaps = 9/233 (3%)
Query: 252 NRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEA 311
N +I K L +A+ F + + T+NA+I +++ K+ +++ M +
Sbjct: 423 NSLIDLYGKMGDLTVAWRMFCEAD-----TNVITWNAMIASYVHCEQSEKAIALFDRMVS 477
Query: 312 AQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDT 371
S T ++ + +G L+ + + + E + + ++L+D K G L+
Sbjct: 478 ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEK 537
Query: 372 AMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVE 431
+ +++ G + A + +I Y G +++A+ L+D+M+++ +P + ++
Sbjct: 538 SRELF----DAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 593
Query: 432 SNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM 484
+ +G ++ +F M + P YSCL+++ + SG ++ A SM
Sbjct: 594 ACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSM 646
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 12/243 (4%)
Query: 278 GGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVA 337
G + D N+L+ ++ N G + I+ M D ++ M+ K G ++ A
Sbjct: 147 GFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR----DVVSWTSMVAGYCKCGMVENA 202
Query: 338 FKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIES 397
++F EM RN+ +S +++ K + A+ ++ M+ G+ + T+ S+I S
Sbjct: 203 REMFDEMPHRNLFT----WSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISS 258
Query: 398 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPT 457
G L+ R ++ + K+ N L T +V+ + G ++ A+ +F + + L
Sbjct: 259 CAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL-- 316
Query: 458 PSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVAAKILL 517
++S +++ A G AM ++ M + G P T+TA+L+ + LV+ +I
Sbjct: 317 --SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 518 EMK 520
MK
Sbjct: 375 NMK 377
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 273 KVQGSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSG 332
++ G G D ++ +++ + G+ + E+++ M + T+ +MI AK+
Sbjct: 173 RIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNN 228
Query: 333 RLDVAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYA 392
+ A LF+ MK + + + S++ S G L+ + Y + + + +
Sbjct: 229 CFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGT 288
Query: 393 SLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKA 452
+L++ + + G ++ A+ +++ + + ++ I++ A G AM F+ M
Sbjct: 289 ALVDMFWRCGDIEKAIHVFEGLPETDSLS----WSSIIKGLAVHGHAHKAMHYFSQMISL 344
Query: 453 GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSM-TNAGLRPGMSTYTAILTLLASKKLVDV 511
GF+P T++ +L + G V+ +++Y +M + G+ P + Y I+ +L +
Sbjct: 345 GFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAE 404
Query: 512 AAKILLEM 519
A +L+M
Sbjct: 405 AENFILKM 412
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 103/234 (44%), Gaps = 7/234 (2%)
Query: 386 PSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSI 445
P+ ++ LI ++ + A + +M K+ P+ + +++++++ +
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 446 FNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLAS 505
+ + + GF + L+ M+A G + +A +++ M G R +S +T+++
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM---GFRDVVS-WTSMVAGYCK 195
Query: 506 KKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMDSSGIRTNNFII 565
+V+ A ++ EM + S ++ Y K+ + A+ FM G+ N ++
Sbjct: 196 CGMVENAREMFDEMPHRNL---FTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 566 RQLFESCMKNGLYESAKPLLETYVNSAAKVDLVLYTSILAHLVRCQEEQNERHL 619
+ SC G E + E V S V+L+L T+++ RC + + H+
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 119/279 (42%), Gaps = 9/279 (3%)
Query: 237 VQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQGSGGKVDTQTYNALITLFLNK 296
V D S +SS A ++ LAK + + + + Y+ LI +
Sbjct: 56 VSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQA 115
Query: 297 GLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLDVAFKLFQEMKER--NIRP--- 351
+ + +E M+ + ++ ++ + S D +LF E+ +R I P
Sbjct: 116 SMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKI 175
Query: 352 SFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLW 411
S+GI L+ S +G + A++I +M+G G+ + + +++ S K G+L+ A LW
Sbjct: 176 SYGI---LIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLW 232
Query: 412 DEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAAS 471
+EM K G + Y + + S K + + +M G P +Y+ L+ +
Sbjct: 233 NEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCER 291
Query: 472 GQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVD 510
G +D A K+Y + P +T+ ++ L +L +
Sbjct: 292 GMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYE 330
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 37/215 (17%)
Query: 216 LFDALNQSRDFDAIQSLFDEMVQDSSKDGISSFDAYNRVIQYLAKAEKLELAFCCFKKVQ 275
L +A S++FD + LFDE+ Q YN++I
Sbjct: 143 LLNACLHSKNFDKVPQLFDEIPQ-----------RYNKIIP------------------- 172
Query: 276 GSGGKVDTQTYNALITLFLNKGLPYKSFEIYESMEAAQCSLDSSTYELMIPSLAKSGRLD 335
D +Y LI + + G P K+ EI M+ + + + ++ SL K G L+
Sbjct: 173 ------DKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELE 226
Query: 336 VAFKLFQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLI 395
VA L+ EM ++ ++ + S K + ++ EM GL+P Y L+
Sbjct: 227 VADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLM 285
Query: 396 ESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIV 430
+Y + G LD A ++++ ++ PN + ++
Sbjct: 286 TAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 112/233 (48%), Gaps = 9/233 (3%)
Query: 282 DTQTYNALITLFLNKGLPYKSFEIYESMEAAQC-SLDSSTYELMIPSLAKSGRLDVAFKL 340
D +YN++++++ G+ ++FE++ + + + ++ T ++ +++ SG L + +
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 341 FQEMKERNIRPSFGIFSSLVDSMGKAGRLDTAMKIYMEMRGFGLRPSATMYASLIESYTK 400
++ + + +S++D K GR++TA K + M+ +R + ++I Y
Sbjct: 310 HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS----WTAMIAGYGM 365
Query: 401 AGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAKSGKLDTAMSIFNDME-KAGFLPTPS 459
G AL L+ M +G RPNY + ++ + + +G FN M+ + G P
Sbjct: 366 HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
Query: 460 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLRPGMSTYTAILTLLASKKLVDVA 512
Y C++++ +G + A L M ++P ++++L K V++A
Sbjct: 426 HYGCMVDLLGRAGFLQKAYDLIQRMK---MKPDSIIWSSLLAACRIHKNVELA 475
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 95/206 (46%), Gaps = 6/206 (2%)
Query: 317 DSSTYELMIPSLAKSGRLDVAFKLFQEMKERNIRPSFGI-FSSLVDSMGKAGRLDTAMKI 375
D +Y ++ A+SG + AF++F+ + + + I S+++ ++ +G L I
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 376 YMEMRGFGLRPSATMYASLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIVESNAK 435
+ ++ GL + S+I+ Y K G+++TA + +D MK R +T ++
Sbjct: 310 HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS----WTAMIAGYGM 365
Query: 436 SGKLDTAMSIFNDMEKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA-GLRPGMS 494
G A+ +F M +G P T+ +L + +G + +N+M G+ PG+
Sbjct: 366 HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
Query: 495 TYTAILTLLASKKLVDVAAKILLEMK 520
Y ++ LL + A ++ MK
Sbjct: 426 HYGCMVDLLGRAGFLQKAYDLIQRMK 451