Jatropha Genome Database

JcCA0150341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0150341.10 + phase: 0 /partial
         (112 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51450.1 | Symbols:  | strictosidine synthase family protein ...   116   3e-27
AT3G51440.1 | Symbols:  | strictosidine synthase family protein ...   115   8e-27
AT3G51430.1 | Symbols: YLS2 | YLS2; strictosidine synthase | chr...   114   1e-26
AT3G51420.1 | Symbols: SSL4, ATSSL4 | SSL4 (STRICTOSIDINE SYNTHA...   107   1e-24

>AT3G51450.1 | Symbols:  | strictosidine synthase family protein |
           chr3:19091013-19092393 FORWARD
          Length = 371

 Score =  116 bits (291), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 56/107 (52%), Positives = 76/107 (71%), Gaps = 1/107 (0%)

Query: 2   PDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGIVSKHIRNIGDTGKNGGVFVVD 61
           PDNI YDG GH+WIALP  +TT W    KYPF+RKL  +V+K+  ++    +N GV  VD
Sbjct: 261 PDNIRYDGDGHYWIALPSGVTTLWNISLKYPFLRKLTAMVAKYGVDLM-FMENAGVLQVD 319

Query: 62  LEGKLISHYYDPELKLISSGVKIGNHLYCGSIIDPYILRLNLAKYPA 108
           L+G  I++Y+DP+L  I++  KIG +LYCGS+   +ILRL+L KYPA
Sbjct: 320 LDGNPIAYYHDPKLSHIATCDKIGKYLYCGSLSQSHILRLDLLKYPA 366


>AT3G51440.1 | Symbols:  | strictosidine synthase family protein |
           chr3:19089114-19090537 FORWARD
          Length = 371

 Score =  115 bits (287), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 56/107 (52%), Positives = 75/107 (70%), Gaps = 1/107 (0%)

Query: 2   PDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGIVSKHIRNIGDTGKNGGVFVVD 61
           PDNI YDG GH+WIA+P  +TT WK   KYPF+RK+  + +K+        +N GV  VD
Sbjct: 261 PDNIRYDGDGHYWIAMPSGVTTLWKLSMKYPFLRKITAMAAKYGYEPMFM-ENAGVLQVD 319

Query: 62  LEGKLISHYYDPELKLISSGVKIGNHLYCGSIIDPYILRLNLAKYPA 108
           L+G  I++Y+D  L  I++GVKIGN+LYCGS+   +ILRL+L KYPA
Sbjct: 320 LDGNPIAYYHDQALSHITTGVKIGNYLYCGSLWHSHILRLDLLKYPA 366


>AT3G51430.1 | Symbols: YLS2 | YLS2; strictosidine synthase |
           chr3:19086548-19087909 FORWARD
          Length = 371

 Score =  114 bits (285), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/107 (50%), Positives = 75/107 (70%), Gaps = 1/107 (0%)

Query: 2   PDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGIVSKHIRNIGDTGKNGGVFVVD 61
           PDNI YDG GH+WIA+    +T W+   KYPF+RK+  I +K+   +    KN GV  VD
Sbjct: 261 PDNIRYDGDGHYWIAMVSGASTLWRLSMKYPFLRKITAIAAKYGVELMFM-KNAGVLQVD 319

Query: 62  LEGKLISHYYDPELKLISSGVKIGNHLYCGSIIDPYILRLNLAKYPA 108
           L+G  I++Y+D  L  I++G+KIGN+LYCG+I+  YI+RL+L KYPA
Sbjct: 320 LDGNPIAYYHDQRLSHITTGIKIGNYLYCGNILHSYIIRLDLLKYPA 366


>AT3G51420.1 | Symbols: SSL4, ATSSL4 | SSL4 (STRICTOSIDINE
           SYNTHASE-LIKE 4); strictosidine synthase |
           chr3:19084082-19085451 FORWARD
          Length = 370

 Score =  107 bits (268), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 1/107 (0%)

Query: 2   PDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGIVSKHIRNIGDTGKNGGVFVVD 61
           PDNI YDG GH+WIAL  E+TT WK   KY F+RKL  + +K+   +    KN  V  VD
Sbjct: 261 PDNIRYDGDGHYWIALISEVTTSWKLSMKYLFLRKLIYMAAKYGVELLSI-KNAAVLQVD 319

Query: 62  LEGKLISHYYDPELKLISSGVKIGNHLYCGSIIDPYILRLNLAKYPA 108
           L+G  I+ Y+D     I+SGVKIGNHLY GS++  YI RL+L KYPA
Sbjct: 320 LDGNPIAMYHDHPFSHITSGVKIGNHLYFGSLLHSYITRLDLLKYPA 366