Jatropha Genome Database

JcCA0149941.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149941.20 + phase: 0 /partial
         (359 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G62130.1 | Symbols:  | epimerase-related | chr3:23004994-2300...   556   e-159
AT5G26600.1 | Symbols:  | catalytic/ pyridoxal phosphate binding...   449   e-126
AT5G26600.2 | Symbols:  | catalytic/ pyridoxal phosphate binding...   449   e-126
AT1G08490.1 | Symbols: ATSUFS, SUFS, ATCPNIFS, ATNFS2, CPNIFS | ...    54   1e-07

>AT3G62130.1 | Symbols:  | epimerase-related |
           chr3:23004994-23006358 FORWARD
          Length = 454

 Score =  556 bits (1434), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 254/360 (70%), Positives = 306/360 (85%), Gaps = 1/360 (0%)

Query: 1   MENEDPRNGESVHHQH-VTKKPRLACVITESEIQEEFSHHQSGIARINNGSFGSCPQSVL 59
           ME  + RNG+S+ H H   KKPRLA ++TES+I  EF+HHQ+G+ARINNGSFG CP SVL
Sbjct: 1   MEAGERRNGDSMSHNHRAPKKPRLAGLLTESDIDSEFAHHQTGVARINNGSFGCCPGSVL 60

Query: 60  AAQREWQLKWLQQPDDFYFNTLRKGILHSRAVVKDLINADDVDEISLVDNATTAAAIVLQ 119
            AQREWQL++L+QPD+FYFN LR+G+L SR V+ DLINADDVDE+SLVDNATTAAAIVLQ
Sbjct: 61  EAQREWQLRYLRQPDEFYFNGLRRGLLASRTVISDLINADDVDEVSLVDNATTAAAIVLQ 120

Query: 120 QIGRSFSEGKFCKNDAVLVFHCTFEAVKKSIQAYVTRAGGSVIEVQLPFPVNSDEKIIAA 179
           ++GR FSEGK+ K D V++FHC F++VKKSIQAYV+R GGS +EV+LPFPVNS+E+II+ 
Sbjct: 121 KVGRCFSEGKYKKEDTVVMFHCAFQSVKKSIQAYVSRVGGSTVEVRLPFPVNSNEEIISK 180

Query: 180 FRKELKNGKSNGKRVRLAIIDHITSMPCVVTPIRELVNICREEGVDQVFVDAAHAVGSVK 239
           FR+ L+ G++NG+ VRLAIIDHITSMPCV+ P+RELV ICREEGV+QVFVDAAHA+GSVK
Sbjct: 181 FREGLEKGRANGRTVRLAIIDHITSMPCVLMPVRELVKICREEGVEQVFVDAAHAIGSVK 240

Query: 240 VDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKRXXXXXXXXXXXXXEYGNGLPIESSWIG 299
           VDVKEIGAD+YVSNLHKWFFCPPS+AF YC+KR             E+GNGLPIES+WIG
Sbjct: 241 VDVKEIGADYYVSNLHKWFFCPPSIAFFYCKKRGSESDVHHPVVSHEFGNGLPIESAWIG 300

Query: 300 TRDYSSQLAVPAALEFVNRFEGGIYGIIKRNHGKVVEMGKMLAEAWGTNLGAPPEMCAGM 359
           TRDYSSQL VP+ +EFVNRFEGG+ GI+ +NH + V MG MLA+AWGTNLG+PPEMC GM
Sbjct: 301 TRDYSSQLVVPSVMEFVNRFEGGMEGIMMKNHDEAVRMGLMLADAWGTNLGSPPEMCVGM 360


>AT5G26600.1 | Symbols:  | catalytic/ pyridoxal phosphate binding |
           chr5:9377455-9378882 FORWARD
          Length = 475

 Score =  449 bits (1155), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 215/324 (66%), Positives = 254/324 (78%), Gaps = 2/324 (0%)

Query: 38  HHQSGIARINNGSFGSCPQSVLAAQREWQLKWLQQPDDFYFNTLRKGILHSRAVVKDLIN 97
           HH    ARINNGSFG CP S+LA QR+WQL++L+QPD FYF+ L+  I  SR+V+K LIN
Sbjct: 66  HHDPDFARINNGSFGCCPSSILALQRDWQLRFLRQPDRFYFDELKPKISDSRSVIKRLIN 125

Query: 98  ADDVDEISLVDNATTAAAIVLQQIGRSFSEGKFCKNDAVLVFHCTFEAVKKSIQAYVTRA 157
           A+  DE+S+VDNATTAAAIVLQQ   +F EG+F K DAV++ H  + +VKKS++AYVTR+
Sbjct: 126 AEHDDEVSIVDNATTAAAIVLQQTAWAFREGRFDKGDAVVMLHYAYGSVKKSVEAYVTRS 185

Query: 158 GGSVIEVQLPFPVNSDEKIIAAFRKELKNGKSNGKRVRLAIIDHITSMPCVVTPIRELVN 217
           GG V EVQLPFPV S ++II  FR  L++GK+NG+RVRLA+IDH+TSMP VV PI+ELV 
Sbjct: 186 GGHVTEVQLPFPVISADEIIDRFRIGLESGKANGRRVRLALIDHVTSMPSVVIPIKELVK 245

Query: 218 ICREEGVDQVFVDAAHAVGSVKVDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKRXX--X 275
           ICR EGVDQVFVDAAH +G V VD+KEIGADFY SNLHKWFF PPSVAFLYCRK      
Sbjct: 246 ICRREGVDQVFVDAAHGIGCVDVDMKEIGADFYTSNLHKWFFAPPSVAFLYCRKSSNGGV 305

Query: 276 XXXXXXXXXXEYGNGLPIESSWIGTRDYSSQLAVPAALEFVNRFEGGIYGIIKRNHGKVV 335
                     EYGNGL +ESSW+GTRDYS+QL VP+ LEFVNRFEGGI GI KRNH  VV
Sbjct: 306 ADLHHPVVSNEYGNGLAVESSWVGTRDYSAQLVVPSILEFVNRFEGGIDGIKKRNHESVV 365

Query: 336 EMGKMLAEAWGTNLGAPPEMCAGM 359
           EMG+ML ++WGT LG PPEMCA M
Sbjct: 366 EMGQMLVKSWGTQLGCPPEMCASM 389


>AT5G26600.2 | Symbols:  | catalytic/ pyridoxal phosphate binding |
           chr5:9377455-9378882 FORWARD
          Length = 475

 Score =  449 bits (1155), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 215/324 (66%), Positives = 254/324 (78%), Gaps = 2/324 (0%)

Query: 38  HHQSGIARINNGSFGSCPQSVLAAQREWQLKWLQQPDDFYFNTLRKGILHSRAVVKDLIN 97
           HH    ARINNGSFG CP S+LA QR+WQL++L+QPD FYF+ L+  I  SR+V+K LIN
Sbjct: 66  HHDPDFARINNGSFGCCPSSILALQRDWQLRFLRQPDRFYFDELKPKISDSRSVIKRLIN 125

Query: 98  ADDVDEISLVDNATTAAAIVLQQIGRSFSEGKFCKNDAVLVFHCTFEAVKKSIQAYVTRA 157
           A+  DE+S+VDNATTAAAIVLQQ   +F EG+F K DAV++ H  + +VKKS++AYVTR+
Sbjct: 126 AEHDDEVSIVDNATTAAAIVLQQTAWAFREGRFDKGDAVVMLHYAYGSVKKSVEAYVTRS 185

Query: 158 GGSVIEVQLPFPVNSDEKIIAAFRKELKNGKSNGKRVRLAIIDHITSMPCVVTPIRELVN 217
           GG V EVQLPFPV S ++II  FR  L++GK+NG+RVRLA+IDH+TSMP VV PI+ELV 
Sbjct: 186 GGHVTEVQLPFPVISADEIIDRFRIGLESGKANGRRVRLALIDHVTSMPSVVIPIKELVK 245

Query: 218 ICREEGVDQVFVDAAHAVGSVKVDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKRXX--X 275
           ICR EGVDQVFVDAAH +G V VD+KEIGADFY SNLHKWFF PPSVAFLYCRK      
Sbjct: 246 ICRREGVDQVFVDAAHGIGCVDVDMKEIGADFYTSNLHKWFFAPPSVAFLYCRKSSNGGV 305

Query: 276 XXXXXXXXXXEYGNGLPIESSWIGTRDYSSQLAVPAALEFVNRFEGGIYGIIKRNHGKVV 335
                     EYGNGL +ESSW+GTRDYS+QL VP+ LEFVNRFEGGI GI KRNH  VV
Sbjct: 306 ADLHHPVVSNEYGNGLAVESSWVGTRDYSAQLVVPSILEFVNRFEGGIDGIKKRNHESVV 365

Query: 336 EMGKMLAEAWGTNLGAPPEMCAGM 359
           EMG+ML ++WGT LG PPEMCA M
Sbjct: 366 EMGQMLVKSWGTQLGCPPEMCASM 389


>AT1G08490.1 | Symbols: ATSUFS, SUFS, ATCPNIFS, ATNFS2, CPNIFS |
           CPNIFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE);
           cysteine desulfurase/ selenocysteine lyase/ transaminase
           | chr1:2685980-2688547 REVERSE
          Length = 463

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 28/216 (12%)

Query: 67  LKWLQQPDDFYFNTLRKGILH-----------SRAVVKDLINADDVDEISLVDNATTAAA 115
           L  LQ   +FY + + +GI +           +R  V   INA D  EI    NAT A  
Sbjct: 89  LDALQNYYEFYNSNVHRGIHYLSAKATDEFELARKKVARFINASDSREIVFTRNATEAIN 148

Query: 116 IVLQQIGRSFSEGKFCKNDAVLVFHCTFEAVKKSIQAYVTRAGGSVIEVQLPFPVNSDEK 175
           +V    G S         D V++      +     Q    + G  +  V L    N DE 
Sbjct: 149 LVAYSWGLS----NLKPGDEVILTVAEHHSCIVPWQIVSQKTGAVLKFVTL----NEDEV 200

Query: 176 IIAAFRKELKNGKSNGKRVRLAIIDHITSMPCVVTPIRELVNICREEGVDQVFVDAAHAV 235
                 +EL + K+     +L  + H++++     PI E+V    + G  +V VDA  +V
Sbjct: 201 PDINKLRELISPKT-----KLVAVHHVSNVLASSLPIEEIVVWAHDVGA-KVLVDACQSV 254

Query: 236 GSVKVDVKEIGADFYVSNLHKWFFCPPS-VAFLYCR 270
             + VDV+++ ADF V++ HK   C P+ + FLY +
Sbjct: 255 PHMVVDVQKLNADFLVASSHK--MCGPTGIGFLYGK 288