Jatropha Genome Database

JcCA0149451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149451.20 + phase: 0 /partial
         (430 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G26600.1 | Symbols:  | catalytic/ pyridoxal phosphate binding...   641   0.0  
AT5G26600.2 | Symbols:  | catalytic/ pyridoxal phosphate binding...   641   0.0  
AT3G62130.1 | Symbols:  | epimerase-related | chr3:23004994-2300...   548   e-156

>AT5G26600.1 | Symbols:  | catalytic/ pyridoxal phosphate binding |
           chr5:9377455-9378882 FORWARD
          Length = 475

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/419 (75%), Positives = 354/419 (84%)

Query: 12  NGDRCNSTTIVTKKPKLSSPIHITDSEIQSEFSHHDPDVARINNGSFGSCPQSVISAQRS 71
           NG   +S +   K+PK+S P +I+ SEI+SEFSHHDPD ARINNGSFG CP S+++ QR 
Sbjct: 33  NGTVESSVSDFVKRPKISHPNYISSSEIESEFSHHDPDFARINNGSFGCCPSSILALQRD 92

Query: 72  LQLLFLRQPDEFYFNHLKPGILRSRSIVKSLINADHVDEVSLVDNATTAAAIVLQKIARD 131
            QL FLRQPD FYF+ LKP I  SRS++K LINA+H DEVS+VDNATTAAAIVLQ+ A  
Sbjct: 93  WQLRFLRQPDRFYFDELKPKISDSRSVIKRLINAEHDDEVSIVDNATTAAAIVLQQTAWA 152

Query: 132 FSEGRFNKGDGVVMLHYAYGSVKKSVEAYVKRAGGHVIEVQLPFPVKSREEIVTEFRKAL 191
           F EGRF+KGD VVMLHYAYGSVKKSVEAYV R+GGHV EVQLPFPV S +EI+  FR  L
Sbjct: 153 FREGRFDKGDAVVMLHYAYGSVKKSVEAYVTRSGGHVTEVQLPFPVISADEIIDRFRIGL 212

Query: 192 ERGKENGRKVRLAVIDHVTSMPSVVIPVKDLVKICREEFVDQVFVDAAHGIGCVDVDMKE 251
           E GK NGR+VRLA+IDHVTSMPSVVIP+K+LVKICR E VDQVFVDAAHGIGCVDVDMKE
Sbjct: 213 ESGKANGRRVRLALIDHVTSMPSVVIPIKELVKICRREGVDQVFVDAAHGIGCVDVDMKE 272

Query: 252 IGADFYTSNLHKWFFCPASVAFLYCRKWSNKGDDDLHHPVVSYEYGNGLAMESAWIGNRD 311
           IGADFYTSNLHKWFF P SVAFLYCRK SN G  DLHHPVVS EYGNGLA+ES+W+G RD
Sbjct: 273 IGADFYTSNLHKWFFAPPSVAFLYCRKSSNGGVADLHHPVVSNEYGNGLAVESSWVGTRD 332

Query: 312 YSAQLVVPSVLEFINRFPGGIEEIKKRNHERVVDMGEMLVKAWGTHLGCPPEMCGSMIMV 371
           YSAQLVVPS+LEF+NRF GGI+ IKKRNHE VV+MG+MLVK+WGT LGCPPEMC SMIMV
Sbjct: 333 YSAQLVVPSILEFVNRFEGGIDGIKKRNHESVVEMGQMLVKSWGTQLGCPPEMCASMIMV 392

Query: 372 GLPACLGILSESDALNLRTHLRDKFGIEVPIYFRDPKDGEVSPITGYARISYQVYNKVE 430
           GLP CLG+ SESD L LRT LR+KF IE+PIYFR P DGE+ PITGY RIS+QVYNK E
Sbjct: 393 GLPVCLGVSSESDVLKLRTFLREKFRIEIPIYFRPPGDGEIDPITGYVRISFQVYNKPE 451


>AT5G26600.2 | Symbols:  | catalytic/ pyridoxal phosphate binding |
           chr5:9377455-9378882 FORWARD
          Length = 475

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/419 (75%), Positives = 354/419 (84%)

Query: 12  NGDRCNSTTIVTKKPKLSSPIHITDSEIQSEFSHHDPDVARINNGSFGSCPQSVISAQRS 71
           NG   +S +   K+PK+S P +I+ SEI+SEFSHHDPD ARINNGSFG CP S+++ QR 
Sbjct: 33  NGTVESSVSDFVKRPKISHPNYISSSEIESEFSHHDPDFARINNGSFGCCPSSILALQRD 92

Query: 72  LQLLFLRQPDEFYFNHLKPGILRSRSIVKSLINADHVDEVSLVDNATTAAAIVLQKIARD 131
            QL FLRQPD FYF+ LKP I  SRS++K LINA+H DEVS+VDNATTAAAIVLQ+ A  
Sbjct: 93  WQLRFLRQPDRFYFDELKPKISDSRSVIKRLINAEHDDEVSIVDNATTAAAIVLQQTAWA 152

Query: 132 FSEGRFNKGDGVVMLHYAYGSVKKSVEAYVKRAGGHVIEVQLPFPVKSREEIVTEFRKAL 191
           F EGRF+KGD VVMLHYAYGSVKKSVEAYV R+GGHV EVQLPFPV S +EI+  FR  L
Sbjct: 153 FREGRFDKGDAVVMLHYAYGSVKKSVEAYVTRSGGHVTEVQLPFPVISADEIIDRFRIGL 212

Query: 192 ERGKENGRKVRLAVIDHVTSMPSVVIPVKDLVKICREEFVDQVFVDAAHGIGCVDVDMKE 251
           E GK NGR+VRLA+IDHVTSMPSVVIP+K+LVKICR E VDQVFVDAAHGIGCVDVDMKE
Sbjct: 213 ESGKANGRRVRLALIDHVTSMPSVVIPIKELVKICRREGVDQVFVDAAHGIGCVDVDMKE 272

Query: 252 IGADFYTSNLHKWFFCPASVAFLYCRKWSNKGDDDLHHPVVSYEYGNGLAMESAWIGNRD 311
           IGADFYTSNLHKWFF P SVAFLYCRK SN G  DLHHPVVS EYGNGLA+ES+W+G RD
Sbjct: 273 IGADFYTSNLHKWFFAPPSVAFLYCRKSSNGGVADLHHPVVSNEYGNGLAVESSWVGTRD 332

Query: 312 YSAQLVVPSVLEFINRFPGGIEEIKKRNHERVVDMGEMLVKAWGTHLGCPPEMCGSMIMV 371
           YSAQLVVPS+LEF+NRF GGI+ IKKRNHE VV+MG+MLVK+WGT LGCPPEMC SMIMV
Sbjct: 333 YSAQLVVPSILEFVNRFEGGIDGIKKRNHESVVEMGQMLVKSWGTQLGCPPEMCASMIMV 392

Query: 372 GLPACLGILSESDALNLRTHLRDKFGIEVPIYFRDPKDGEVSPITGYARISYQVYNKVE 430
           GLP CLG+ SESD L LRT LR+KF IE+PIYFR P DGE+ PITGY RIS+QVYNK E
Sbjct: 393 GLPVCLGVSSESDVLKLRTFLREKFRIEIPIYFRPPGDGEIDPITGYVRISFQVYNKPE 451


>AT3G62130.1 | Symbols:  | epimerase-related |
           chr3:23004994-23006358 FORWARD
          Length = 454

 Score =  548 bits (1413), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 262/426 (61%), Positives = 329/426 (77%), Gaps = 11/426 (2%)

Query: 12  NGDRCNSTTIVTKKPKLSSPIHITDSEIQSEFSHHDPDVARINNGSFGSCPQSVISAQRS 71
           NGD  +      KKP+L+  +  T+S+I SEF+HH   VARINNGSFG CP SV+ AQR 
Sbjct: 8   NGDSMSHNHRAPKKPRLAGLL--TESDIDSEFAHHQTGVARINNGSFGCCPGSVLEAQRE 65

Query: 72  LQLLFLRQPDEFYFNHLKPGILRSRSIVKSLINADHVDEVSLVDNATTAAAIVLQKIARD 131
            QL +LRQPDEFYFN L+ G+L SR+++  LINAD VDEVSLVDNATTAAAIVLQK+ R 
Sbjct: 66  WQLRYLRQPDEFYFNGLRRGLLASRTVISDLINADDVDEVSLVDNATTAAAIVLQKVGRC 125

Query: 132 FSEGRFNKGDGVVMLHYAYGSVKKSVEAYVKRAGGHVIEVQLPFPVKSREEIVTEFRKAL 191
           FSEG++ K D VVM H A+ SVKKS++AYV R GG  +EV+LPFPV S EEI+++FR+ L
Sbjct: 126 FSEGKYKKEDTVVMFHCAFQSVKKSIQAYVSRVGGSTVEVRLPFPVNSNEEIISKFREGL 185

Query: 192 ERGKENGRKVRLAVIDHVTSMPSVVIPVKDLVKICREEFVDQVFVDAAHGIGCVDVDMKE 251
           E+G+ NGR VRLA+IDH+TSMP V++PV++LVKICREE V+QVFVDAAH IG V VD+KE
Sbjct: 186 EKGRANGRTVRLAIIDHITSMPCVLMPVRELVKICREEGVEQVFVDAAHAIGSVKVDVKE 245

Query: 252 IGADFYTSNLHKWFFCPASVAFLYCRKWSNKGDDDLHHPVVSYEYGNGLAMESAWIGNRD 311
           IGAD+Y SNLHKWFFCP S+AF YC+K  +  + D+HHPVVS+E+GNGL +ESAWIG RD
Sbjct: 246 IGADYYVSNLHKWFFCPPSIAFFYCKKRGS--ESDVHHPVVSHEFGNGLPIESAWIGTRD 303

Query: 312 YSAQLVVPSVLEFINRFPGGIEEIKKRNHERVVDMGEMLVKAWGTHLGCPPEMCGSMIMV 371
           YS+QLVVPSV+EF+NRF GG+E I  +NH+  V MG ML  AWGT+LG PPEMC  M+M+
Sbjct: 304 YSSQLVVPSVMEFVNRFEGGMEGIMMKNHDEAVRMGLMLADAWGTNLGSPPEMCVGMVMI 363

Query: 372 GLPACLGILSESDALNLRTHLRDKFGIEVPIYFRDPKDGE-------VSPITGYARISYQ 424
           GLP+ L + S+ DA+ LR++LR  + +EVP+++   +DGE          IT Y RIS+Q
Sbjct: 364 GLPSKLCVGSDEDAIKLRSYLRVHYSVEVPVFYLGLRDGEEGVKDKDSGLITAYVRISHQ 423

Query: 425 VYNKVE 430
           VYNK E
Sbjct: 424 VYNKTE 429