Jatropha Genome Database

JcCA0149451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149451.10 - phase: 0 /TE/pseudo/partial
         (207 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G11910.1 | Symbols:  | aspartyl protease family protein | chr...   215   2e-56
AT1G62290.2 | Symbols:  | aspartyl protease family protein | chr...   213   9e-56
AT1G62290.1 | Symbols:  | aspartyl protease family protein | chr...   213   9e-56
AT4G04460.1 | Symbols:  | aspartyl protease family protein | chr...   202   8e-53
AT4G22050.1 | Symbols:  | aspartyl protease family protein | chr...   108   3e-24
AT1G69100.1 | Symbols:  | aspartic-type endopeptidase | chr1:259...    91   5e-19

>AT1G11910.1 | Symbols:  | aspartyl protease family protein |
           chr1:4017119-4019874 REVERSE
          Length = 506

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/202 (56%), Positives = 141/202 (69%), Gaps = 6/202 (2%)

Query: 6   LSVAFCLWASAWLLLPAGSDGLMRISLKKRRLDVDSIKAARIAREEGKSRIGANNMLRSS 65
           L V+F L  SA+      +DG  R+ LKK +LD  +  AAR+  ++ K  + A  +  S 
Sbjct: 12  LIVSFLLCFSAFA---ERNDGTFRVGLKKLKLDSKNRLAARVESKQEKP-LRAYRLGDSG 67

Query: 66  DIHIVPLKNYLDAQYYGEIGIGSPPQNFTVIFDTGSSNLWIPSSKCYFSLACYFHSRYKS 125
           D  +V LKNYLDAQYYGEI IG+PPQ FTV+FDTGSSNLW+PSSKCYFSLAC  H +YKS
Sbjct: 68  DADVVVLKNYLDAQYYGEIAIGTPPQKFTVVFDTGSSNLWVPSSKCYFSLACLLHPKYKS 127

Query: 126 SRSKTYVQNGTSCEIQYGSGSIAGFFSQDNVLVGDLIVKDQVFIEATREGSLSFILD*NL 185
           SRS TY +NG +  I YG+G+IAGFFS D V VGDL+VKDQ FIEAT+E  ++F++    
Sbjct: 128 SRSSTYEKNGKAAAIHYGTGAIAGFFSNDAVTVGDLVVKDQEFIEATKEPGITFVVA-KF 186

Query: 186 TGILGLGFQEYRRLGMLFLVWY 207
            GILGLGFQE   +G    VWY
Sbjct: 187 DGILGLGFQEI-SVGKAAPVWY 207


>AT1G62290.2 | Symbols:  | aspartyl protease family protein |
           chr1:23010107-23012681 REVERSE
          Length = 513

 Score =  213 bits (541), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 116/210 (55%), Positives = 143/210 (68%), Gaps = 11/210 (5%)

Query: 7   SVAFCLWASAWLLLPAGS---DGLMRISLKKRRLDVDSIKAARIAREEGKSRIGA----N 59
           +VAF ++ S  L   A S   DG  R+ LKK +LD ++  A R   ++ ++   +    N
Sbjct: 7   AVAFSVFVSFLLFFTAYSKRNDGTFRVGLKKLKLDPNNRLATRFGSKQEEALRSSLRSYN 66

Query: 60  NML--RSSDIHIVPLKNYLDAQYYGEIGIGSPPQNFTVIFDTGSSNLWIPSSKCYFSLAC 117
           N L   S D  IVPLKNYLDAQYYGEI IG+PPQ FTVIFDTGSSNLW+PS KC+FSL+C
Sbjct: 67  NNLGGDSGDADIVPLKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWVPSGKCFFSLSC 126

Query: 118 YFHSRYKSSRSKTYVQNGTSCEIQYGSGSIAGFFSQDNVLVGDLIVKDQVFIEATREGSL 177
           YFH++YKSSRS TY ++G    I YGSGSI+GFFS D V VGDL+VKDQ FIE T E  L
Sbjct: 127 YFHAKYKSSRSSTYKKSGKRAAIHYGSGSISGFFSYDAVTVGDLVVKDQEFIETTSEPGL 186

Query: 178 SFILD*NLTGILGLGFQEYRRLGMLFLVWY 207
           +F++     G+LGLGFQE   +G    VWY
Sbjct: 187 TFLVA-KFDGLLGLGFQEI-AVGNATPVWY 214


>AT1G62290.1 | Symbols:  | aspartyl protease family protein |
           chr1:23010107-23012681 REVERSE
          Length = 513

 Score =  213 bits (541), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 116/210 (55%), Positives = 143/210 (68%), Gaps = 11/210 (5%)

Query: 7   SVAFCLWASAWLLLPAGS---DGLMRISLKKRRLDVDSIKAARIAREEGKSRIGA----N 59
           +VAF ++ S  L   A S   DG  R+ LKK +LD ++  A R   ++ ++   +    N
Sbjct: 7   AVAFSVFVSFLLFFTAYSKRNDGTFRVGLKKLKLDPNNRLATRFGSKQEEALRSSLRSYN 66

Query: 60  NML--RSSDIHIVPLKNYLDAQYYGEIGIGSPPQNFTVIFDTGSSNLWIPSSKCYFSLAC 117
           N L   S D  IVPLKNYLDAQYYGEI IG+PPQ FTVIFDTGSSNLW+PS KC+FSL+C
Sbjct: 67  NNLGGDSGDADIVPLKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWVPSGKCFFSLSC 126

Query: 118 YFHSRYKSSRSKTYVQNGTSCEIQYGSGSIAGFFSQDNVLVGDLIVKDQVFIEATREGSL 177
           YFH++YKSSRS TY ++G    I YGSGSI+GFFS D V VGDL+VKDQ FIE T E  L
Sbjct: 127 YFHAKYKSSRSSTYKKSGKRAAIHYGSGSISGFFSYDAVTVGDLVVKDQEFIETTSEPGL 186

Query: 178 SFILD*NLTGILGLGFQEYRRLGMLFLVWY 207
           +F++     G+LGLGFQE   +G    VWY
Sbjct: 187 TFLVA-KFDGLLGLGFQEI-AVGNATPVWY 214


>AT4G04460.1 | Symbols:  | aspartyl protease family protein |
           chr4:2225232-2227746 FORWARD
          Length = 508

 Score =  202 bits (515), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 108/214 (50%), Positives = 143/214 (66%), Gaps = 9/214 (4%)

Query: 1   MRNRILSVAFCLWASAWLLLPAGS-----DGLMRISLKKRRLDVDSIKAARIAREEGKSR 55
           M  R  S       S  +L+   S     DG +RI LKKR+LD  +  A+++  +   S 
Sbjct: 1   MGTRFQSFLLVFLLSCLILISTASCERNGDGTIRIGLKKRKLDRSNRLASQLFLKNRGSH 60

Query: 56  IGANNMLRSSD--IHIVPLKNYLDAQYYGEIGIGSPPQNFTVIFDTGSSNLWIPSSKCYF 113
               +  R +D    +VPLKNYLDAQYYG+I IG+PPQ FTVIFDTGSSNLWIPS+KCY 
Sbjct: 61  WSPKHYFRLNDENADMVPLKNYLDAQYYGDITIGTPPQKFTVIFDTGSSNLWIPSTKCYL 120

Query: 114 SLACYFHSRYKSSRSKTYVQNGTSCEIQYGSGSIAGFFSQDNVLVGDLIVKDQVFIEATR 173
           S+ACYFHS+YK+S+S +Y +NG    I+YG+G+I+G+FS D+V VGD++VK+Q FIEAT 
Sbjct: 121 SVACYFHSKYKASQSSSYRKNGKPASIRYGTGAISGYFSNDDVKVGDIVVKEQEFIEATS 180

Query: 174 EGSLSFILD*NLTGILGLGFQEYRRLGMLFLVWY 207
           E  ++F+L     GILGLGF+E   +G    VWY
Sbjct: 181 EPGITFLLA-KFDGILGLGFKEI-SVGNSTPVWY 212


>AT4G22050.1 | Symbols:  | aspartyl protease family protein |
           chr4:11683865-11685506 FORWARD
          Length = 354

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 80/138 (57%), Gaps = 3/138 (2%)

Query: 70  VPLKNYLDAQYYGEIGIGSPPQNFTVIFDTGSSNLWIPSSKCYFSLACYFHSRYKSSRSK 129
           V LKN  D  YYG+I IG+P Q FTV+FDTGSS+LW+PS   + +      +RY SS S+
Sbjct: 36  VQLKNVKDFLYYGKIQIGNPGQTFTVLFDTGSSSLWVPSEN-WLAKTENPRNRYISSASR 94

Query: 130 TYVQNGTSCEIQYGSGSIAGFFSQDNVLVGDLIVKDQVFIEATREGSLSFILD*NLTGIL 189
           T+ +NGT  E++YG GS+ GF S D V VG + +  Q FIE  +     F       GIL
Sbjct: 95  TFKENGTKAELKYGKGSLTGFLSVDTVTVGGISITSQTFIEGVKTPYKEFFKKMPFDGIL 154

Query: 190 GLGFQEYRRLGMLFLVWY 207
           GL F +    G    VW+
Sbjct: 155 GLRFTDPLNFGT--SVWH 170


>AT1G69100.1 | Symbols:  | aspartic-type endopeptidase |
           chr1:25979999-25981436 FORWARD
          Length = 367

 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 5/136 (3%)

Query: 72  LKNYLDAQYYGEIGIGSPPQNFTVIFDTGSSNLWIPSSKCYFSLACYFHSRYKSSRSKT- 130
           LKN+    +YGEI +GSPPQ F V+FDTGS++LW+P SK +     + H ++    SKT 
Sbjct: 39  LKNFDGVVFYGEISVGSPPQKFNVVFDTGSTDLWVP-SKEWPEETDHKHPKFDKDASKTC 97

Query: 131 YVQNGTSCEIQYGSGSIAGFFSQDNVLVGDLIVKDQVFIEATREGSLSFILD*NLTGILG 190
            +  G    I Y +GS+ G  +QDNV VG +++K Q    A      ++       G++G
Sbjct: 98  RLMKGGEVNIAYETGSVVGILAQDNVNVGGVVIKSQDLFLARNPD--TYFRSVKFDGVIG 155

Query: 191 LGFQEYRRLGMLFLVW 206
           LG +  R  G +  VW
Sbjct: 156 LGIKSSRAQGSV-TVW 170