Jatropha Genome Database

JcCA0147671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147671.10 + phase: 2 /partial
         (75 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G34130.1 | Symbols: STT3B | STT3B (staurosporin and temperatu...    79   5e-16
AT5G19690.1 | Symbols: STT3A | STT3A (STAUROSPORIN AND TEMPERATU...    53   4e-08

>AT1G34130.1 | Symbols: STT3B | STT3B (staurosporin and temperature
           sensitive 3-like b); oligosaccharyl transferase |
           chr1:12430000-12432985 FORWARD
          Length = 735

 Score = 79.0 bits (193), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/37 (91%), Positives = 37/37 (100%)

Query: 1   YDRARGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKP 37
           YDRARGVEIGNKDIKLE+LEEA+TTSNWIVRIY+VKP
Sbjct: 694 YDRARGVEIGNKDIKLEHLEEAYTTSNWIVRIYRVKP 730


>AT5G19690.1 | Symbols: STT3A | STT3A (STAUROSPORIN AND TEMPERATURE
           SENSITIVE 3-LIKE A); oligosaccharyl transferase |
           chr5:6652649-6658214 FORWARD
          Length = 779

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 1   YDRARGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKP 37
           YDR R  EIG K  KL + EE FT+ +W+VR+YK+KP
Sbjct: 712 YDRVRRTEIGKKHFKLTHFEEVFTSHHWMVRLYKLKP 748