Jatropha Genome Database

JcCA0147251.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147251.20 + phase: 0 
         (178 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17668.1 | Symbols: ENA | ENA (ENHANCER OF ATNSI ACTIVITY); h...   142   1e-34

>AT3G17668.1 | Symbols: ENA | ENA (ENHANCER OF ATNSI ACTIVITY); heat
           shock protein binding / unfolded protein binding |
           chr3:6039640-6040324 FORWARD
          Length = 135

 Score =  142 bits (358), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 63/99 (63%), Positives = 76/99 (76%)

Query: 50  LSLAKPSWVVKTESNVRKEIRKKPNPPCVVCKGSGRVDCHYCSGKGRTNLVHLPMLPKGE 109
           L L KPSW+V+T+S  +  ++ K    CV+C GSGRVDC  C GKGRTN V + MLP+GE
Sbjct: 33  LYLTKPSWIVRTQSGAKTCMKSKAKGRCVICHGSGRVDCFNCCGKGRTNCVDVEMLPRGE 92

Query: 110 WPKWCRTCGGSGLSYCSRCLGTGEYRYIMGFHFMKMDSD 148
           WPKWC++CGGSGLS CSRCLGTGEYRYIMGF F+  + D
Sbjct: 93  WPKWCKSCGGSGLSDCSRCLGTGEYRYIMGFRFLNQNDD 131