Jatropha Genome Database

JcCA0147051.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147051.20 + phase: 0 /pseudo
         (273 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19940.2 | Symbols:  | N-acetyl-gamma-glutamyl-phosphate redu...   234   4e-62
AT2G19940.1 | Symbols:  | N-acetyl-gamma-glutamyl-phosphate redu...   234   4e-62

>AT2G19940.2 | Symbols:  | N-acetyl-gamma-glutamyl-phosphate
           reductase/ NAD or NADH binding / binding / catalytic/
           oxidoreductase, acting on the aldehyde or oxo group of
           donors, NAD or NADP as acceptor / protein dimerization |
           chr2:8613168-8615649 FORWARD
          Length = 401

 Score =  234 bits (597), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/280 (49%), Positives = 175/280 (62%), Gaps = 26/280 (9%)

Query: 1   MST-SVFNSVYLDGGCLCKGQVKFSTLRKRNEHRQCVVRSAALSTRSLQIRNS---KQEK 56
           MST S F+S+    GC  KG+ K     KR +        A+ S+ S ++  S   K EK
Sbjct: 1   MSTASAFSSIQ---GCWFKGERKIRVADKRAKRLTLGSHVASPSSMSFRVSASSSVKPEK 57

Query: 57  EARVALLGASGYTGAEIIRLLANHPFFEISVMTADKNAGKSIESVFPHFISKKDLPVLVS 116
           + R+ LLGASGYTGAEI+RLLANHP F++++MTAD+ AG+S+ESVFPH  ++K LP LVS
Sbjct: 58  DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK-LPTLVS 116

Query: 117 TNDASFSDVDAVFCCLPHGTTQEIIKGLPRKLKIVDLSAVWFETTIKTDFRLRDISEYEE 176
             DA FS VDAVFCCLPHGTTQEIIK LP  LKIVDLSA         DFRLR+I+EYEE
Sbjct: 117 VKDADFSTVDAVFCCLPHGTTQEIIKELPTALKIVDLSA---------DFRLRNIAEYEE 167

Query: 177 WYGQSHRAPDLQEEAIYGLTEIF----QKGNKICTASC*SWLLSNINSTP--SCSFTKG* 230
           WYGQ H+A +LQ+E +YGLTEI     +K   +    C    +  +   P    +  K  
Sbjct: 168 WYGQPHKAVELQKEVVYGLTEILREDIKKARLVANPGCYPTTI-QLPLVPLLKANLIKHE 226

Query: 231 SHCI*KYHH*RKVWR--EWSSLYTELTEGIMSYGVTRHRH 268
           +  I          R  + ++LY+E+ EGI SYGVTRHRH
Sbjct: 227 NIIIDAKSGVSGAGRGAKEANLYSEIAEGISSYGVTRHRH 266


>AT2G19940.1 | Symbols:  | N-acetyl-gamma-glutamyl-phosphate
           reductase/ NAD or NADH binding / binding / catalytic/
           oxidoreductase, acting on the aldehyde or oxo group of
           donors, NAD or NADP as acceptor / protein dimerization |
           chr2:8613168-8615649 FORWARD
          Length = 401

 Score =  234 bits (597), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/280 (49%), Positives = 175/280 (62%), Gaps = 26/280 (9%)

Query: 1   MST-SVFNSVYLDGGCLCKGQVKFSTLRKRNEHRQCVVRSAALSTRSLQIRNS---KQEK 56
           MST S F+S+    GC  KG+ K     KR +        A+ S+ S ++  S   K EK
Sbjct: 1   MSTASAFSSIQ---GCWFKGERKIRVADKRAKRLTLGSHVASPSSMSFRVSASSSVKPEK 57

Query: 57  EARVALLGASGYTGAEIIRLLANHPFFEISVMTADKNAGKSIESVFPHFISKKDLPVLVS 116
           + R+ LLGASGYTGAEI+RLLANHP F++++MTAD+ AG+S+ESVFPH  ++K LP LVS
Sbjct: 58  DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK-LPTLVS 116

Query: 117 TNDASFSDVDAVFCCLPHGTTQEIIKGLPRKLKIVDLSAVWFETTIKTDFRLRDISEYEE 176
             DA FS VDAVFCCLPHGTTQEIIK LP  LKIVDLSA         DFRLR+I+EYEE
Sbjct: 117 VKDADFSTVDAVFCCLPHGTTQEIIKELPTALKIVDLSA---------DFRLRNIAEYEE 167

Query: 177 WYGQSHRAPDLQEEAIYGLTEIF----QKGNKICTASC*SWLLSNINSTP--SCSFTKG* 230
           WYGQ H+A +LQ+E +YGLTEI     +K   +    C    +  +   P    +  K  
Sbjct: 168 WYGQPHKAVELQKEVVYGLTEILREDIKKARLVANPGCYPTTI-QLPLVPLLKANLIKHE 226

Query: 231 SHCI*KYHH*RKVWR--EWSSLYTELTEGIMSYGVTRHRH 268
           +  I          R  + ++LY+E+ EGI SYGVTRHRH
Sbjct: 227 NIIIDAKSGVSGAGRGAKEANLYSEIAEGISSYGVTRHRH 266