Jatropha Genome Database

JcCA0146871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0146871.10 + phase: 0 
         (156 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79500.4 | Symbols: AtkdsA1 | 2-dehydro-3-deoxyphosphooctonat...   213   3e-56
AT1G79500.3 | Symbols: AtkdsA1 | 2-dehydro-3-deoxyphosphooctonat...   213   3e-56
AT1G79500.2 | Symbols: AtkdsA1 | 2-dehydro-3-deoxyphosphooctonat...   213   3e-56
AT1G79500.1 | Symbols: AtkdsA1 | 2-dehydro-3-deoxyphosphooctonat...   213   3e-56
AT1G16340.3 | Symbols: ATKDSA2, ATKSDA | ATKDSA2; 3-deoxy-8-phos...   211   2e-55
AT1G16340.2 | Symbols: ATKDSA2, ATKSDA | ATKDSA2; 3-deoxy-8-phos...   211   2e-55
AT1G16340.1 | Symbols: ATKDSA2, ATKSDA | ATKDSA2; 3-deoxy-8-phos...   211   2e-55
AT1G79500.5 | Symbols:  | 2-dehydro-3-deoxyphosphooctonate aldol...   185   1e-47

>AT1G79500.4 | Symbols: AtkdsA1 | 2-dehydro-3-deoxyphosphooctonate
           aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase /
           3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase
           (KDSA) | chr1:29903604-29905989 FORWARD
          Length = 290

 Score =  213 bits (543), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/122 (86%), Positives = 116/122 (95%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRN EWMREA+CPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 169 MFGYNDLIVDPRNFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 228

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL+APVDGPTQWPLRHLE LLEEL+AIAR +KGK+R+ IDLTP+
Sbjct: 229 AVAVGVDGIFMEVHDDPLSAPVDGPTQWPLRHLEELLEELIAIARVTKGKQRLQIDLTPY 288

Query: 155 RD 156
           RD
Sbjct: 289 RD 290


>AT1G79500.3 | Symbols: AtkdsA1 | 2-dehydro-3-deoxyphosphooctonate
           aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase /
           3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase
           (KDSA) | chr1:29903604-29905989 FORWARD
          Length = 290

 Score =  213 bits (543), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/122 (86%), Positives = 116/122 (95%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRN EWMREA+CPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 169 MFGYNDLIVDPRNFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 228

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL+APVDGPTQWPLRHLE LLEEL+AIAR +KGK+R+ IDLTP+
Sbjct: 229 AVAVGVDGIFMEVHDDPLSAPVDGPTQWPLRHLEELLEELIAIARVTKGKQRLQIDLTPY 288

Query: 155 RD 156
           RD
Sbjct: 289 RD 290


>AT1G79500.2 | Symbols: AtkdsA1 | 2-dehydro-3-deoxyphosphooctonate
           aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase /
           3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase
           (KDSA) | chr1:29903604-29905989 FORWARD
          Length = 290

 Score =  213 bits (543), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/122 (86%), Positives = 116/122 (95%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRN EWMREA+CPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 169 MFGYNDLIVDPRNFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 228

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL+APVDGPTQWPLRHLE LLEEL+AIAR +KGK+R+ IDLTP+
Sbjct: 229 AVAVGVDGIFMEVHDDPLSAPVDGPTQWPLRHLEELLEELIAIARVTKGKQRLQIDLTPY 288

Query: 155 RD 156
           RD
Sbjct: 289 RD 290


>AT1G79500.1 | Symbols: AtkdsA1 | 2-dehydro-3-deoxyphosphooctonate
           aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase /
           3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase
           (KDSA) | chr1:29903604-29905989 FORWARD
          Length = 290

 Score =  213 bits (543), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/122 (86%), Positives = 116/122 (95%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRN EWMREA+CPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 169 MFGYNDLIVDPRNFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 228

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL+APVDGPTQWPLRHLE LLEEL+AIAR +KGK+R+ IDLTP+
Sbjct: 229 AVAVGVDGIFMEVHDDPLSAPVDGPTQWPLRHLEELLEELIAIARVTKGKQRLQIDLTPY 288

Query: 155 RD 156
           RD
Sbjct: 289 RD 290


>AT1G16340.3 | Symbols: ATKDSA2, ATKSDA | ATKDSA2;
           3-deoxy-8-phosphooctulonate synthase |
           chr1:5588123-5590469 REVERSE
          Length = 291

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/122 (86%), Positives = 114/122 (93%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRNLEWMREADCPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 170 MFGYNDLIVDPRNLEWMREADCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 229

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL APVDGPTQWPLRHLE LLEEL+AIA  +KGK++  IDLTP+
Sbjct: 230 AVAVGVDGIFMEVHDDPLNAPVDGPTQWPLRHLEELLEELIAIASVTKGKQQFQIDLTPY 289

Query: 155 RD 156
           RD
Sbjct: 290 RD 291


>AT1G16340.2 | Symbols: ATKDSA2, ATKSDA | ATKDSA2;
           3-deoxy-8-phosphooctulonate synthase |
           chr1:5588123-5590469 REVERSE
          Length = 291

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/122 (86%), Positives = 114/122 (93%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRNLEWMREADCPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 170 MFGYNDLIVDPRNLEWMREADCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 229

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL APVDGPTQWPLRHLE LLEEL+AIA  +KGK++  IDLTP+
Sbjct: 230 AVAVGVDGIFMEVHDDPLNAPVDGPTQWPLRHLEELLEELIAIASVTKGKQQFQIDLTPY 289

Query: 155 RD 156
           RD
Sbjct: 290 RD 291


>AT1G16340.1 | Symbols: ATKDSA2, ATKSDA | ATKDSA2;
           3-deoxy-8-phosphooctulonate synthase |
           chr1:5588123-5590469 REVERSE
          Length = 291

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/122 (86%), Positives = 114/122 (93%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRNLEWMREADCPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 170 MFGYNDLIVDPRNLEWMREADCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 229

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL APVDGPTQWPLRHLE LLEEL+AIA  +KGK++  IDLTP+
Sbjct: 230 AVAVGVDGIFMEVHDDPLNAPVDGPTQWPLRHLEELLEELIAIASVTKGKQQFQIDLTPY 289

Query: 155 RD 156
           RD
Sbjct: 290 RD 291


>AT1G79500.5 | Symbols:  | 2-dehydro-3-deoxyphosphooctonate aldolase
           / phospho-2-dehydro-3-deoxyoctonate aldolase /
           3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase
           (KDSA) | chr1:29903797-29907730 FORWARD
          Length = 336

 Score =  185 bits (469), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 83/92 (90%), Positives = 89/92 (96%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRN EWMREA+CPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 135 MFGYNDLIVDPRNFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 194

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRH 126
           AVAVGVDGIFMEVHDDPL+APVDGPTQWPLRH
Sbjct: 195 AVAVGVDGIFMEVHDDPLSAPVDGPTQWPLRH 226