Jatropha Genome Database

JcCA0146681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0146681.10 + phase: 0 
         (248 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11880.1 | Symbols:  | diaminopimelate decarboxylase, putativ...   321   3e-88
AT3G14390.1 | Symbols:  | diaminopimelate decarboxylase, putativ...   309   1e-84

>AT5G11880.1 | Symbols:  | diaminopimelate decarboxylase, putative /
           DAP carboxylase, putative | chr5:3827806-3829942 REVERSE
          Length = 489

 Score =  321 bits (823), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 163/229 (71%), Positives = 183/229 (79%), Gaps = 4/229 (1%)

Query: 1   MAATTTSTHLYRPPSLSKT-RTYPLNQNPFLKIPILPLKFTRTSSKPFSLKAVLSQNQAN 59
           MAA T    L +P S+  T   Y LNQ    +IP L LK T    K  S+KA +SQN   
Sbjct: 1   MAAVTQ--FLSQPSSIRGTLNQYQLNQTSLSRIPFLSLKSTLKPLKRLSVKAAVSQNSTK 58

Query: 60  TFTQKT-TPFKHCFTKPSDGFLYCENLKVQDIMENVEKRPFYLYSKPQITRNVEAYRDAL 118
           T T+++ + F HCF K SDGFLYCE  KVQDIME VEKRPFYLYSKPQITRN+EAY++AL
Sbjct: 59  TLTKESASSFDHCFKKSSDGFLYCEGTKVQDIMETVEKRPFYLYSKPQITRNLEAYKEAL 118

Query: 119 EGLNSIIGYAIKANNNLKVLEHLRQLGCGAVLVSGNELRLALRAGFDPKRCIFNGNGKLL 178
           EG+ S+IGYAIKANNNLK+LEHLR LGCGAVLVSGNELRLAL AGFDP +CIFNGNGK L
Sbjct: 119 EGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSL 178

Query: 179 EDLVLAAQEGVFVNVDSEFDLENIVAAARIAGEKVNVLLRINPDVDPQV 227
           EDLVLAAQEGVFVNVDSEFDL NIV A+RI+G++VNVLLRINPDVDPQV
Sbjct: 179 EDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQV 227


>AT3G14390.1 | Symbols:  | diaminopimelate decarboxylase, putative /
           DAP carboxylase, putative | chr3:4806771-4808954 FORWARD
          Length = 484

 Score =  309 bits (792), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 159/228 (69%), Positives = 182/228 (79%), Gaps = 7/228 (3%)

Query: 1   MAATTTSTHLYRPPSLSKTRTYPLNQNPFLKIPILPLKFTRTSSKPFSLKA-VLSQNQAN 59
           MAA T    L +P SL+  +           IP+L LK T    K  S+KA V+SQN + 
Sbjct: 1   MAAATQ--FLSQPSSLNPHQLKNQTSQRSRSIPVLSLKSTLKPLKRLSVKAAVVSQNSSK 58

Query: 60  TFTQKTTPFKHCFTKPSDGFLYCENLKVQDIMENVEKRPFYLYSKPQITRNVEAYRDALE 119
           T T+    F HCF K SDGFLYCE  KV+DIME+VE+RPFYLYSKPQITRN+EAY++ALE
Sbjct: 59  TVTK----FDHCFKKSSDGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEALE 114

Query: 120 GLNSIIGYAIKANNNLKVLEHLRQLGCGAVLVSGNELRLALRAGFDPKRCIFNGNGKLLE 179
           G++S+IGYAIKANNNLK+LEHLR LGCGAVLVSGNELRLALRAGFDP +CIFNGNGK LE
Sbjct: 115 GVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLE 174

Query: 180 DLVLAAQEGVFVNVDSEFDLENIVAAARIAGEKVNVLLRINPDVDPQV 227
           DLVLAAQEGVFVNVDSEFDL NIV A+RI+G++VNVLLRINPDVDPQV
Sbjct: 175 DLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQV 222