Jatropha Genome Database
- JcCA0145721.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0145721.20 + phase: 0 /partial
(304 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17380.1 | Symbols: | meprin and TRAF homology domain-contai... 226 1e-59
AT3G20370.1 | Symbols: | meprin and TRAF homology domain-contai... 130 8e-31
AT3G22080.1 | Symbols: | meprin and TRAF homology domain-contai... 115 4e-26
AT1G69650.1 | Symbols: | meprin and TRAF homology domain-contai... 112 4e-25
AT3G20360.1 | Symbols: | meprin and TRAF homology domain-contai... 110 2e-24
AT1G69660.1 | Symbols: | meprin and TRAF homology domain-contai... 104 6e-23
AT3G28220.1 | Symbols: | meprin and TRAF homology domain-contai... 103 1e-22
AT4G00780.1 | Symbols: | meprin and TRAF homology domain-contai... 103 1e-22
AT3G20380.1 | Symbols: | meprin and TRAF homology domain-contai... 103 1e-22
AT4G01390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 103 2e-22
AT5G26260.1 | Symbols: | meprin and TRAF homology domain-contai... 102 4e-22
AT2G15710.1 | Symbols: | meprin and TRAF homology domain-contai... 101 5e-22
AT4G09770.1 | Symbols: | meprin and TRAF homology domain-contai... 96 2e-20
AT5G26280.1 | Symbols: | meprin and TRAF homology domain-contai... 90 2e-18
AT2G04170.4 | Symbols: | meprin and TRAF homology domain-contai... 87 1e-17
AT2G04170.3 | Symbols: | meprin and TRAF homology domain-contai... 87 1e-17
AT2G04170.2 | Symbols: | meprin and TRAF homology domain-contai... 87 1e-17
AT2G04170.1 | Symbols: | meprin and TRAF homology domain-contai... 87 1e-17
AT4G09780.1 | Symbols: | meprin and TRAF homology domain-contai... 85 5e-17
AT2G32870.1 | Symbols: | meprin and TRAF homology domain-contai... 84 1e-16
AT1G58270.1 | Symbols: ZW9 | ZW9 | chr1:21612394-21614089 REVERSE 82 4e-16
AT2G32880.1 | Symbols: | meprin and TRAF homology domain-contai... 81 9e-16
AT5G26320.1 | Symbols: | meprin and TRAF homology domain-contai... 80 1e-15
AT2G04190.1 | Symbols: | meprin and TRAF homology domain-contai... 80 2e-15
AT5G26290.1 | Symbols: | meprin and TRAF homology domain-contai... 79 4e-15
AT1G65150.2 | Symbols: | meprin and TRAF homology domain-contai... 78 6e-15
AT1G65150.1 | Symbols: | meprin and TRAF homology domain-contai... 78 6e-15
AT2G04170.5 | Symbols: | meprin and TRAF homology domain-contai... 78 8e-15
AT5G26300.1 | Symbols: | meprin and TRAF homology domain-contai... 74 1e-13
AT1G65370.1 | Symbols: | meprin and TRAF homology domain-contai... 71 7e-13
AT3G11910.1 | Symbols: UBP13 | UBP13 (UBIQUITIN-SPECIFIC PROTEAS... 65 5e-11
AT2G25320.1 | Symbols: | LOCATED IN: chloroplast; CONTAINS Inte... 65 6e-11
AT5G26280.2 | Symbols: | meprin and TRAF homology domain-contai... 64 9e-11
AT5G06600.3 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEAS... 64 1e-10
AT5G06600.1 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEAS... 64 1e-10
AT5G06600.2 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEAS... 64 1e-10
AT3G46190.1 | Symbols: | meprin and TRAF homology domain-contai... 62 5e-10
AT2G42460.1 | Symbols: | meprin and TRAF homology domain-contai... 54 1e-07
AT5G52330.1 | Symbols: | meprin and TRAF homology domain-contai... 52 6e-07
AT2G01790.1 | Symbols: | meprin and TRAF homology domain-contai... 51 8e-07
AT3G58210.1 | Symbols: | meprin and TRAF homology domain-contai... 50 3e-06
AT3G58200.1 | Symbols: | meprin and TRAF homology domain-contai... 49 3e-06
AT1G04300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 3e-06
AT3G58360.1 | Symbols: | meprin and TRAF homology domain-contai... 49 4e-06
AT1G65050.1 | Symbols: | meprin and TRAF homology domain-contai... 48 8e-06
>AT3G17380.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:5950240-5952124 FORWARD
Length = 309
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 180/302 (59%), Gaps = 12/302 (3%)
Query: 8 QISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKSK---DHISL 64
IS+ P +Y V+I+ FS + + +YE+E FEA YKWKLV++ G+KSK DH+S+
Sbjct: 13 SISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKDHVSV 72
Query: 65 YLALADTLE--PHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFI 122
YL+LAD+ P VYAVFRLYLLD+ N+LI Q G + FH K EWGFDKFI
Sbjct: 73 YLSLADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQ-----GNERRFHSVKREWGFDKFI 127
Query: 123 NVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKL 182
F D SNGYL+ D C+ G +V K +G+ E LS+ K +KH+WKIE FSKL
Sbjct: 128 PTGTFSDASNGYLMEDTCMFGADVF-VSKERRSGRGECLSMIKDATSSKHVWKIENFSKL 186
Query: 183 S-ETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRV 241
E+ S F G ++WKIE +P GT G +LS+Y+ L D I +KI+ T+R+
Sbjct: 187 DKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYLTLVDPETISDGTKIFVEFTIRI 246
Query: 242 LDQLKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVT 301
DQL+ +HI + WF + S HGW +++ + Y + L +DV V+A+V V +T
Sbjct: 247 FDQLQGRHIAGKVTKWFSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVEADVCVHGIT 306
Query: 302 NV 303
+
Sbjct: 307 SA 308
>AT3G20370.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:7105481-7107079 FORWARD
Length = 379
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 147/309 (47%), Gaps = 16/309 (5%)
Query: 2 ASNMTMQISEKIPPYYAVEIQKFSAP-KDYQVTKYESEVFEAQEYKWKLVVHLKGSK--- 57
ASN + ++ P Y+++++ F+ K KY S F Y W LVV G+K
Sbjct: 73 ASNAVKGLRDRPPSSYSLKMESFNTLLKSTYTEKYVSRPFSVGGYNWTLVVFPNGNKKDS 132
Query: 58 SKDHISLYLALADTLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWG 117
++SLY+A+ ++ +YA R Y+ ++ + Q D++ K F K WG
Sbjct: 133 GSGYLSLYVAIDNSTLGQQEIYADLRFYIFNKNERKYFTIQ--DTDVWK--FSVFKTMWG 188
Query: 118 FDKFINVAAFRDPSNGYLV-GDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKI 176
F + + + F+DP+ GYL GD C GV+V ++ K E S+ + + W I
Sbjct: 189 FSQVLPIDTFKDPTKGYLYDGDHCEFGVDVT---MPSLYEKSELFSVTENFLNPRFTWTI 245
Query: 177 EKFSKL-SETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYT 235
FS L + SE+F+ G + W I+++P G G+ + LS+Y+ L + P KIY
Sbjct: 246 RGFSTLLKNSYLSEVFSIGGRSWNIQINPSGLGTGEGKALSMYLGLNVNEIFRPYEKIYV 305
Query: 236 HVTLRVLDQLKDKHIIAEENFWFDSTRSRH---GWSRFLPLDYLHRFKKSLQFEDVLFVD 292
LR L+QL +I E + W++ G+ F+ YL K DVL V
Sbjct: 306 RAKLRALNQLNLSNIERELDIWYNGPGYGEYSWGFPEFIYFPYLTDSSKGFVKNDVLMVQ 365
Query: 293 AEVKVLAVT 301
E++ ++ T
Sbjct: 366 VEMEAISST 374
>AT3G22080.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:7777818-7781718 REVERSE
Length = 595
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 155/313 (49%), Gaps = 27/313 (8%)
Query: 1 VASNMTMQISEKIPPYYAVEIQKFSAPKD---YQVTKYESEVFEAQEYKWKLVVHLKGSK 57
V+S E+ P Y++++Q S + + KY+S +F + Y W+++++ KG++
Sbjct: 287 VSSTTLRSWRERTPNSYSLKLQNISQVEKSTLFSDGKYQSRLFSSGGYNWRMIIYPKGNR 346
Query: 58 SKD---HISLYLALADTLEPHIL---VYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHK 111
D IS+Y+ + T V+A R ++ ++K + + Q +S+ F+
Sbjct: 347 KDDGSGFISMYVEIDSTSLLTTPTTEVFADLRFFVFNKKENKYYTIQHVESK----LFNA 402
Query: 112 RKLEWGFDKFINVAAFRDPSNGYLV-GDACVVGVEVISADKAT---ITGKEESLSINKQG 167
+ WG + + V F DP NGY+ GD C GV+VI A T I E+LS
Sbjct: 403 FRTIWGLAQVLPVDTFTDPKNGYIFEGDQCEFGVDVIVAAPPTNWEIHTLHEALS----- 457
Query: 168 HVAKHLWKIEKFSKLSET-RTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNA 226
K W ++ FS+L+ TS F+ ++W ++L+P+G G ++LSLY+ L
Sbjct: 458 -QPKFFWTVKNFSELNNNVYTSGNFSMRERKWVLKLYPKGDVKGDRKWLSLYLYLDQSET 516
Query: 227 IDPSSKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFE 286
+ S KI+ LRVLD H+ + + W+ S+ + G+ +F+ L K+ +
Sbjct: 517 LKESEKIFVQAQLRVLDPRGSNHVTHKISSWYTSSNTAWGYRKFVS---LAEIPKAYLDK 573
Query: 287 DVLFVDAEVKVLA 299
D L V +V+V++
Sbjct: 574 DTLKVQIDVEVVS 586
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 57/302 (18%)
Query: 9 ISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGS---KSKDHISLY 65
+ E P Y+++ + + D KYES +F A Y W+LV++ KG+ + IS+Y
Sbjct: 13 LREHPPSSYSIKFENIAELDD---GKYESSLFAAGGYNWRLVIYPKGNAKDEGSGFISMY 69
Query: 66 LALADT---LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFI 122
+ + T P V+A ++ ++K DK+
Sbjct: 70 VEIDSTNLLSSPLTGVFAYLVFFVYNKKT---------------------------DKY- 101
Query: 123 NVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKL 182
+ + D C GV+V+ A T K E +S N++ K W ++KF +L
Sbjct: 102 -----------FTIKDQCEFGVDVLVAPSLT---KWEVVSFNQKILDPKFSWSLKKFKEL 147
Query: 183 -SETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRV 241
E S+ F G ++W +++HP+G + LS+YV L + ++ KIYT V LRV
Sbjct: 148 KEELYNSDKFLVGGRQWFLKVHPKGVK-ARDNSLSIYVYLSESETLNAEEKIYTRVHLRV 206
Query: 242 LDQLKDKHIIAEENFWFDSTRSR--HGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLA 299
LD H + NFW +T +GW F LD + +K L E L ++ E V++
Sbjct: 207 LDPFGSIHQAGQCNFWRTNTNKNQGYGWPTFASLDKVR--EKYLDNEGSLNIEIEFAVVS 264
Query: 300 VT 301
T
Sbjct: 265 ST 266
>AT1G69650.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr1:26197498-26198821 REVERSE
Length = 294
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 151/314 (48%), Gaps = 47/314 (14%)
Query: 1 VASNMTMQISEKIPPYYAVEIQKFSA---PKDYQVTKYESEVFEAQEYKWKLVVHLKGSK 57
V+S + + P Y+++I FS + KY+S +F + + + ++K +
Sbjct: 9 VSSTIKKNWRDHPPSSYSLKIHNFSQLEKTTSFSGHKYQSRLFSSGD----ITGNVKDNG 64
Query: 58 SKDHISLYLALADTL----EPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRK 113
S IS+Y+ L + +P V+A R ++ ++K + + + D E K+ F K
Sbjct: 65 S-GFISMYVELDSSSLMESKPPTEVFAELRFFVYNKKQNKYFTK---DVEIKR--FDALK 118
Query: 114 LEWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISADKAT----ITGKEESLSINKQGHV 169
+ WG K G+ C GV+VI A T ++ +E LS
Sbjct: 119 MVWGLPK----------------GNECEFGVDVIVAPPLTNWEILSFHDEKLS------Y 156
Query: 170 AKHLWKIEKFSKLSETRTSEI--FTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAI 227
K W ++ FS+ E S+ F+ G +EW ++L P+G K +YLS+++ L D+ +
Sbjct: 157 PKVTWSVKNFSQWKENECSKPNRFSIGGREWVLKLFPKGNSRAKGKYLSVFLYLADNETL 216
Query: 228 DPSSKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFED 287
P KI+T V +R+L+ L H+ + N+W + +GW +FL LD + K L ED
Sbjct: 217 KPDEKIFTQVVVRILNPLGSNHVASRLNYWHKGSNFGYGWCKFLSLDKIR--KTYLDKED 274
Query: 288 VLFVDAEVKVLAVT 301
L ++AE +V++ T
Sbjct: 275 TLMIEAEFEVVSAT 288
>AT3G20360.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:7099952-7101589 REVERSE
Length = 363
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 19/312 (6%)
Query: 3 SNMTMQISEKIPPYYAVEIQKFSA-PKDYQVTKYESEVFEAQEYKWKLVVHLKGSKSKD- 60
S+ + E+ P Y+++++ F+ K +YES F Y W LVV+ KG+K+ +
Sbjct: 55 SSTVKGLRERPPSSYSLKMESFNTLMKSVYTERYESRPFRVGRYNWTLVVYPKGNKNDNG 114
Query: 61 --HISLYLALAD-TLEPHIL-VYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEW 116
HISLY+ L + TL V+ R Y+ ++K + Q D++ + KR W
Sbjct: 115 TGHISLYVVLDNSTLTSQSEEVHVDLRFYVFNKKETKYFTIQ--DTDVWRFSAIKRM--W 170
Query: 117 GFDKFINVAAFRDPSNGYLVG-DACVVGVEVISADKATITGKEESLSINKQGHVAKHLWK 175
GF K + + F + NGYL D C GV+VI K E S+ K + W
Sbjct: 171 GFSKVLPLITFNNLKNGYLYDVDHCEFGVDVI---IPPFYEKSEVFSVTKSFPSPRFTWY 227
Query: 176 IEKFSKLSETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAI--DPSSKI 233
I+ +S L SE F G + W + + G + + LSLY+ LG + P K+
Sbjct: 228 IQGYSTLPTDYLSEEFIIGGKSWNLRIFKNGFGAFEGKNLSLYLNLGPQELLKAKPYDKV 287
Query: 234 YTHVTLRVLDQLKDKHIIAEE---NFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLF 290
Y LRV +Q + + E + WF G++ F+PL L K D+L
Sbjct: 288 YVRAKLRVPNQFGSQSNLVLERPLDNWFSPQTIGWGYADFMPLSDLRNSSKGFLVNDMLV 347
Query: 291 VDAEVKVLAVTN 302
V ++ ++ TN
Sbjct: 348 VQVAMEEISSTN 359
>AT1G69660.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr1:26199623-26200603 REVERSE
Length = 231
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 114/230 (49%), Gaps = 11/230 (4%)
Query: 74 PHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNG 133
P +A R Y+ ++K + + Q D E K+ F+ ++ WG K ++ F +P NG
Sbjct: 5 PPTEAFAELRFYVYNKKENKYFTIQ--DVEVKR--FNALRMVWGLLKVLSYDTFTNPENG 60
Query: 134 YLV-GDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLSE-TRTSEIF 191
++ G C GV+V+ A T E LS +++ K W ++ FS+L E TS +
Sbjct: 61 FIFEGGECEFGVDVLVAPPLT---NWEILSFDEKLSPPKFSWNLKNFSELKEDVYTSNKY 117
Query: 192 TDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHII 251
G +EW ++L+P+G +YLSLYV L D + K + +RVL+ L H+
Sbjct: 118 PMGGKEWVLKLYPKGNSRADGKYLSLYVHLADSETLKSDEKNFKQGHVRVLNPLGSNHVE 177
Query: 252 AEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVT 301
+ + W+ + GW FL + L K L ED L V+ E KV++ T
Sbjct: 178 VQSSCWYKESSRGWGWDHFLSIANLR--KTYLDKEDALNVEIEFKVVSAT 225
>AT3G28220.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:10524420-10526497 FORWARD
Length = 370
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 144/307 (46%), Gaps = 27/307 (8%)
Query: 8 QISEKIPP-YYAVEIQKF----SAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKSK--- 59
+I IPP Y ++I+ F ++P KYES FE+ Y W L+V+ KG+ +
Sbjct: 73 EIWRVIPPSTYCLKIESFIKFATSP---NAEKYESRPFESGGYNWTLIVYPKGNIKEGAP 129
Query: 60 -DHISLYLALADT--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEW 116
+++S+Y+ + ++ L VYA + ++ +RK +L Q D++ F K W
Sbjct: 130 LNYVSMYVQIDNSTLLNSPKEVYAEVKFFIYNRKEDKYLTYQETDAKR----FFLFKPYW 185
Query: 117 GFDKFINVAAFRDPSNGYLV-GDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWK 175
G+ +P+ G+L GD + GV+V + + K E S K H + W
Sbjct: 186 GYGNVRPYTDVANPNAGWLFDGDNVLFGVDVFVTE---VFNKWEVFSFTKSLHDRLYKWT 242
Query: 176 IEKFSKLS-ETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIY 234
+ FS L + S+ F G + W ++++P G G+ LSLYV D + P KIY
Sbjct: 243 LPNFSSLEKQYYVSDKFVIGGRSWALKVYPSGDGEGQGNSLSLYVVAVD---VKPYDKIY 299
Query: 235 THVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAE 294
LR+++Q KH+ + W D S G+ +F+P L K L D L ++ E
Sbjct: 300 LKAKLRIINQRDSKHMEKKVESWSDQANS-WGFQKFVPFADLKDTSKGLLVNDTLKMEIE 358
Query: 295 VKVLAVT 301
+ + T
Sbjct: 359 FEDFSNT 365
>AT4G00780.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr4:334779-336120 FORWARD
Length = 299
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 30/292 (10%)
Query: 20 EIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKSK--DHISLYLALADTLEPHIL 77
+I FS K + + K ES VF+ +KWKL V+ G K+ H+S++L + +
Sbjct: 25 KIDNFSLLKKHGIEKVESSVFDLAGHKWKLSVYPNGHKNAKGTHVSMFLVNQVPVN-DMP 83
Query: 78 VYAVFRLYLLDRKNHNHL-----IRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSN 132
Y + + L+RK H H I P SE GF +FI++A
Sbjct: 84 TYELLVVSQLERKWHTHGRDEFDINPEPASE-------------GFLRFISLADLE--RK 128
Query: 133 GYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLSETRT--SEI 190
G+L+GD C+ GV+ + A G E S+ ++ K W + KFS + + S
Sbjct: 129 GFLIGDCCMFGVKFHGIEPAN-PGTAECFSLIEKPLNHKVTWMMSKFSSFNPGKAHQSNE 187
Query: 191 FTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHI 250
F G ++W++E+HP G K + S+Y+ P +K Y LRVLDQ+ H+
Sbjct: 188 FVVGTRKWRLEVHPRGYMDEKDKSFSVYLSAEGFVNNAPMTKTYAKFKLRVLDQVSWNHV 247
Query: 251 IAEENFWFDSTRS-RHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVT 301
WFD+ S + G++ F+PL L+ + +D L+V E +V++ T
Sbjct: 248 EESGLSWFDAEPSDQSGFADFMPLGKLN---EPYLVKDKLYVGVEFEVVSTT 296
>AT3G20380.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:7108183-7109770 FORWARD
Length = 375
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 15/306 (4%)
Query: 2 ASNMTMQISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKG---SKS 58
ASN+ ++E P Y+ +I+ +++ +ES F A Y W L VH G +
Sbjct: 74 ASNIVKGLTEVPPSSYSFKIESYNSFLKIPYLGFESRPFAAGGYNWVLKVHPNGLTWDGT 133
Query: 59 KDHISLYLALADT--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEW 116
++SLY+ L ++ + +VYA R Y+ + + Q D+ K KR L
Sbjct: 134 SGYVSLYVLLHESTPITADQVVYADLRFYIFNNNEKKYFTVQ--DTNVWKFTAPKRLL-- 189
Query: 117 GFDKFINVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKI 176
GF K ++ F D NGY+ + C GV+V A K ESL + ++ + +
Sbjct: 190 GFPKVMSADQFEDLRNGYIYDNHCEFGVDVTVASHYQ---KSESLFVTEKFDNPIFTYAL 246
Query: 177 EKFSKL-SETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYT 235
+FS L E+ S++F+ G + +++ P G +L K + +SLY+ + D P IY
Sbjct: 247 LRFSTLLKESYQSDVFSIGGRSMYLQVFPNGRNLSKGKAMSLYLNIND--KFKPFEMIYV 304
Query: 236 HVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEV 295
LRVL+Q K ++ + + W+ S G + +PL L K D+L V+ ++
Sbjct: 305 RAKLRVLNQRKLNNVEIQVSNWYTSWFYYSGDFQIIPLADLRDSSKGFVVNDMLKVEVQL 364
Query: 296 KVLAVT 301
+ ++ T
Sbjct: 365 EGISST 370
>AT4G01390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN:
stem, cotyledon, hypocotyl, root, leaf; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible; CONTAINS InterPro DOMAIN/s: TRAF-like
(InterPro:IPR008974), MATH (InterPro:IPR002083); BEST
Arabidopsis thaliana protein match is: meprin and TRAF
homology domain-containing protein / MATH
domain-containing protein (TAIR:AT4G00780.1); Has 248
Blast hits to 240 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 237;
Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
| chr4:570242-571595 REVERSE
Length = 300
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 35/299 (11%)
Query: 17 YAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKG---SKSKDHISLYL----ALA 69
+ +I FS + + + K ES VF+ +KWKL VH G +K ++SLYL +
Sbjct: 22 HMFKIDHFSLLRKHGIEKVESSVFDLAGHKWKLSVHPNGHTNAKGTHYVSLYLMNQAPVY 81
Query: 70 DTLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSE--GKKICFHKRKLEWGFDKFINVAAF 127
DT L Y + + L+ K H H + +E G + GF +FI++
Sbjct: 82 DT-----LTYELLAVSQLEPKWHTHGRDEYETNEELGSE----------GFREFISLVDL 126
Query: 128 RDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLS--ET 185
+ NG+L+GD C+ GV+ + A G ES S+ ++ + W + FS +
Sbjct: 127 K--KNGFLIGDCCMFGVKFHGIEPAK-PGTAESFSLIEKPLNHRVTWMMTMFSSFNPGNV 183
Query: 186 RTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYV-CLGDDNAIDPSSKIYTHVTLRVLDQ 244
S F G ++W+I++HP G+ K + S+Y+ LG N P +K Y LRVLDQ
Sbjct: 184 HQSNEFVVGTRKWRIKVHPRGSMGEKDKSFSVYLSALGFVNNA-PKTKTYARFKLRVLDQ 242
Query: 245 LKDKHIIAEENFWFDS-TRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVTN 302
+ H+ + W + RHG++ F+PL L +D L+V + V++V+N
Sbjct: 243 VSRNHVEKTISGWLGAEPDDRHGFADFMPLGEL---DDPYLVKDKLYVGVDFDVISVSN 298
>AT5G26260.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr5:9200492-9202153 FORWARD
Length = 351
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 17/306 (5%)
Query: 6 TMQISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKS---KDHI 62
T ++ ++ P V I FS KD + YES +FEA YKW+LV+++KG+ +HI
Sbjct: 52 TRELRDERPSSKIVTITSFSVIKD-RGEPYESSIFEAAGYKWRLVLYVKGNPKGGINNHI 110
Query: 63 SLYLAL--ADTLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDK 120
SLY + +TL V +L++ +RK L + L ++G ++ K EWGF +
Sbjct: 111 SLYARIEETETLPRGWEVNVDLKLFVHNRK----LKKYLSVTDGTVKRYNDAKKEWGFTQ 166
Query: 121 FINVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFS 180
I++ F + + GYLV D G E+ + T K+E ++ WKI +FS
Sbjct: 167 LISLPTFYNANEGYLVQDTASFGAEIFIVNP---TEKQEKVTFISNPPDNVFTWKILRFS 223
Query: 181 KLSET-RTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTL 239
L + S+ F G + W++ +P+G+ G+ L +++ A + + V L
Sbjct: 224 TLEDKFYYSDDFLVGDRYWRLGFNPKGSGGGRPHALPIFLYAQGHKANAVVTNTWGAVNL 283
Query: 240 RVLDQLKDKHIIAEENFWFDSTRSRH--GWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKV 297
R+ +Q H W+ RS + G + + + L K D + +AE+
Sbjct: 284 RLKNQRSSNHKQLYSAAWY-PIRSDYGVGVNNIILMSELKDASKGYMVNDAIIFEAEMVK 342
Query: 298 LAVTNV 303
++VTN+
Sbjct: 343 VSVTNI 348
>AT2G15710.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:6842648-6845103 FORWARD
Length = 365
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 141/300 (47%), Gaps = 37/300 (12%)
Query: 3 SNMTMQISEKIPPYYAVEIQKFSAPKDYQVT--KYESEVFEAQEYKWKLVVHLKGS---K 57
S + + E P Y+++I K S Q+T KYES F + Y W+LV++ KG+ K
Sbjct: 87 STIVNNLREHPPSSYSLKINKLS-----QLTFDKYESHRFLSGGYNWRLVIYPKGNEKDK 141
Query: 58 SKDHISLYLALADT----LEP-HILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKR 112
IS+Y+ +T P + Y +F +Y ++K + + Q D E K+ F+
Sbjct: 142 GSGFISMYVEFDNTKVSSTSPMEVFAYIIFFVY--NKKENKYFTIQ--DVEVKR--FNAL 195
Query: 113 KLEWGFDKFINVAAFRDPSNGYLV-GDACVVGVEVISADKATITGKEESLSINKQGHVAK 171
+ WG + +++ F D NGY G+ C GV+V+ A T K E +S +++ + K
Sbjct: 196 RTVWGLSQVLSLETFNDLENGYTFEGEQCEFGVDVMVASPIT---KWEVVSFDEKLDILK 252
Query: 172 HLWKIEKFSKLSET-RTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPS 230
W ++ FS L E SE F+ G + W ++++P+G ++LS+++ L +
Sbjct: 253 FSWSVKDFSVLKEEFYVSERFSMGGRLWDLQMYPKGDPRRDKKWLSIFLRLSGSETLTVD 312
Query: 231 SKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLF 290
KIY LRVLD L + WF G+ FL L K L ED F
Sbjct: 313 EKIYVIAHLRVLDPLGN---------WFRDRNKGWGYLEFLSFSKLR--KSYLDLEDTFF 361
>AT4G09770.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr4:6154534-6155859 REVERSE
Length = 297
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 124/249 (49%), Gaps = 20/249 (8%)
Query: 9 ISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKG---SKSKDHISLY 65
I E+ P Y +++ FS K + YES F+ +KW+L+ + G KDH+S+Y
Sbjct: 4 IREEAPSSYLMKLVGFSEVK-FSHQPYESADFDVGGHKWRLIFYPAGKLEEGGKDHVSIY 62
Query: 66 LALADTLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVA 125
A + + + + A + ++ + N + + Q +G ++K K E GF + + +
Sbjct: 63 -ARIENVGASMQIDAELKFFIYNHNNKQYSVFQ----DGTMKHYNKEKKECGFAQMLLFS 117
Query: 126 AFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLSET 185
F DP NGY+ G+AC+VGVE+ K E + + K WKI FS + +
Sbjct: 118 KFNDPKNGYIDGNACIVGVEIFVIKPIE---KVERVVFTQNPPENKFTWKISHFSYIGDK 174
Query: 186 R--TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGD--DNAIDPSSKIYTHVTLRV 241
R S+ F G ++W++++ P+G K+ LS+YV NA+ +S Y + LR+
Sbjct: 175 RYYYSDEFVVGDRKWRLKISPKGDK--KVRALSVYVQAMAYLPNAV--ASSTYAKLRLRL 230
Query: 242 LDQLKDKHI 250
L+Q HI
Sbjct: 231 LNQKNSNHI 239
>AT5G26280.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr5:9208724-9210403 FORWARD
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 140/306 (45%), Gaps = 15/306 (4%)
Query: 5 MTMQISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKS---KDH 61
+T ++ E+ P V I FS K + YES VFEA YKW+LV+++ G+K+ DH
Sbjct: 50 VTRELREERPSSKIVTITSFSVIKG-RGEPYESSVFEAAGYKWRLVLYVNGNKNDGGNDH 108
Query: 62 ISLYLALADT--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFD 119
ISLY + +T L V +L++ + K H +L ++G ++ K EWGF
Sbjct: 109 ISLYARIEETNSLPLGWEVNVDLKLFVHNGKLHKYLTV----TDGLVKRYNNAKKEWGFG 164
Query: 120 KFINVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKF 179
+ I + F + + GYL D G E+ A ++E ++ WKI +F
Sbjct: 165 QLIPRSTFYNANEGYLDQDTGSFGAEIFIVKPAQ---QQEKVTFISNPPNNVFTWKILRF 221
Query: 180 SKLSET-RTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVT 238
S L + S+ F + W++ +P+G G+ L +++ A ++ + V
Sbjct: 222 STLEDKFYYSDDFLVEDRYWRLGFNPKGDGGGRPHALPIFLFAQGHKANAVATNTWGAVN 281
Query: 239 LRVLDQLKDKHIIAEENFWFD-STRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKV 297
LR+ +Q H W+ + G + + L L+ K D + +AE+
Sbjct: 282 LRLKNQRSTNHRQIYSAAWYPIGSGYGVGVNNIILLADLNDASKGYLVNDAIIFEAEMVK 341
Query: 298 LAVTNV 303
+++TN+
Sbjct: 342 VSITNI 347
>AT2G04170.4 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:1417404-1418711 REVERSE
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 16/277 (5%)
Query: 35 YESEVFEAQEYKWKLVVHLKGSKSKD---HISLYLALADT--LEPHILVYAVFRLYLLDR 89
YES VFEA YKW+LV+++ G+++ HISLY+ + +T L V +L++ +
Sbjct: 27 YESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNG 86
Query: 90 KNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISA 149
K +LI + +G ++ K EWG+ K I + F D + GYL D G E+ S
Sbjct: 87 KQRKYLIVK----DGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSG 142
Query: 150 DKATITGKEESLSINKQGHVAKHLWKIEKFSKLSET-RTSEIFTDGIQEWKIELHPEGTD 208
+ K +S N +V WKI FS L + S+ F + W++ +P+GT
Sbjct: 143 TAVQVQEKVTFIS-NPPNNV--FTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNPKGTG 199
Query: 209 LGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRH--G 266
G+ + + +++ ++ + V LR+ +Q H W+ TRS + G
Sbjct: 200 DGRSQAIPIFLYAQGHKPNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWY-PTRSDYGVG 258
Query: 267 WSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVTNV 303
+ + L + K D + +AE+ ++VTN+
Sbjct: 259 VNTIISLAEFNDASKGYSVNDSIIFEAEMVKVSVTNI 295
>AT2G04170.3 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:1417404-1418711 REVERSE
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 16/277 (5%)
Query: 35 YESEVFEAQEYKWKLVVHLKGSKSKD---HISLYLALADT--LEPHILVYAVFRLYLLDR 89
YES VFEA YKW+LV+++ G+++ HISLY+ + +T L V +L++ +
Sbjct: 27 YESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNG 86
Query: 90 KNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISA 149
K +LI + +G ++ K EWG+ K I + F D + GYL D G E+ S
Sbjct: 87 KQRKYLIVK----DGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSG 142
Query: 150 DKATITGKEESLSINKQGHVAKHLWKIEKFSKLSET-RTSEIFTDGIQEWKIELHPEGTD 208
+ K +S N +V WKI FS L + S+ F + W++ +P+GT
Sbjct: 143 TAVQVQEKVTFIS-NPPNNV--FTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNPKGTG 199
Query: 209 LGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRH--G 266
G+ + + +++ ++ + V LR+ +Q H W+ TRS + G
Sbjct: 200 DGRSQAIPIFLYAQGHKPNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWY-PTRSDYGVG 258
Query: 267 WSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVTNV 303
+ + L + K D + +AE+ ++VTN+
Sbjct: 259 VNTIISLAEFNDASKGYSVNDSIIFEAEMVKVSVTNI 295
>AT2G04170.2 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:1417404-1419156 REVERSE
Length = 420
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 16/277 (5%)
Query: 35 YESEVFEAQEYKWKLVVHLKGSKSKD---HISLYLALADT--LEPHILVYAVFRLYLLDR 89
YES VFEA YKW+LV+++ G+++ HISLY+ + +T L V +L++ +
Sbjct: 149 YESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNG 208
Query: 90 KNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISA 149
K +LI + +G ++ K EWG+ K I + F D + GYL D G E+ S
Sbjct: 209 KQRKYLIVK----DGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSG 264
Query: 150 DKATITGKEESLSINKQGHVAKHLWKIEKFSKLSET-RTSEIFTDGIQEWKIELHPEGTD 208
+ K +S N +V WKI FS L + S+ F + W++ +P+GT
Sbjct: 265 TAVQVQEKVTFIS-NPPNNV--FTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNPKGTG 321
Query: 209 LGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRH--G 266
G+ + + +++ ++ + V LR+ +Q H W+ TRS + G
Sbjct: 322 DGRSQAIPIFLYAQGHKPNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWY-PTRSDYGVG 380
Query: 267 WSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVTNV 303
+ + L + K D + +AE+ ++VTN+
Sbjct: 381 VNTIISLAEFNDASKGYSVNDSIIFEAEMVKVSVTNI 417
>AT2G04170.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:1417404-1419156 REVERSE
Length = 420
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 16/277 (5%)
Query: 35 YESEVFEAQEYKWKLVVHLKGSKSKD---HISLYLALADT--LEPHILVYAVFRLYLLDR 89
YES VFEA YKW+LV+++ G+++ HISLY+ + +T L V +L++ +
Sbjct: 149 YESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNG 208
Query: 90 KNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISA 149
K +LI + +G ++ K EWG+ K I + F D + GYL D G E+ S
Sbjct: 209 KQRKYLIVK----DGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSG 264
Query: 150 DKATITGKEESLSINKQGHVAKHLWKIEKFSKLSET-RTSEIFTDGIQEWKIELHPEGTD 208
+ K +S N +V WKI FS L + S+ F + W++ +P+GT
Sbjct: 265 TAVQVQEKVTFIS-NPPNNV--FTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNPKGTG 321
Query: 209 LGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRH--G 266
G+ + + +++ ++ + V LR+ +Q H W+ TRS + G
Sbjct: 322 DGRSQAIPIFLYAQGHKPNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWY-PTRSDYGVG 380
Query: 267 WSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVTNV 303
+ + L + K D + +AE+ ++VTN+
Sbjct: 381 VNTIISLAEFNDASKGYSVNDSIIFEAEMVKVSVTNI 417
>AT4G09780.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr4:6159538-6161378 REVERSE
Length = 443
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 35/265 (13%)
Query: 9 ISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKW----------------KLVVH 52
+ E+ P Y +++ FS K + YES F+A +KW +L+ +
Sbjct: 57 LREEAPSSYLMKLVGFSEVK-FSHQPYESADFDAAGHKWYCQPNLRSHIYLITLMRLIFY 115
Query: 53 LKGS---KSKDHISLYLALADTLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICF 109
G KDHIS+Y + + + + + +L + + + Q +G +
Sbjct: 116 PAGKVEEGGKDHISIYARVENVGASEMQIDVELKFFLYNHNAKKYSVFQ----DGTVKHY 171
Query: 110 HKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHV 169
K K E GF + + + F DP NGY GDAC+VGVE+ K E + +
Sbjct: 172 SKEKKECGFAQMLLRSKFNDPKNGYTDGDACIVGVEIFVIKPIE---KVERVVFTQNPPT 228
Query: 170 AKHLWKIEKFSKLSETR--TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGD--DN 225
K WKI FSKL + + S+ F G ++W+I++ P+G K+ LS+YV + N
Sbjct: 229 NKFTWKISDFSKLGDKKYHYSDEFVVGERKWRIKISPKGDK--KVRALSVYVQAMEYLPN 286
Query: 226 AIDPSSKIYTHVTLRVLDQLKDKHI 250
A+ +S Y + L++++Q HI
Sbjct: 287 AV--ASTTYAKLKLQLMNQKNTNHI 309
>AT2G32870.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:13944968-13946776 REVERSE
Length = 416
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 120/291 (41%), Gaps = 35/291 (12%)
Query: 31 QVTKYESEVFEAQEYKWKLVVHLKGSKSKDHISLYLALADTLEPHILVYAVFRLYLLDRK 90
+V +S F+ KW+LV+ L + KDH+S L + D F
Sbjct: 138 KVKNCQSLDFQVSGVKWRLVIRLSRGR-KDHLSFVLEITDEKCTGSTWDVKF-------- 188
Query: 91 NHNHLIRQLPDSEGKKICF------HKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGV 144
N I +P + G CF +++K G FI+ ++ +LV D
Sbjct: 189 --NFKIGIVPQT-GPDYCFVLVGHQNEKKRSQGLANFISHTDLKE---RFLVNDKAGFYA 242
Query: 145 EV--------ISADKATITGKEESLSINKQGHVAKHLWKIEKFSKL-SETRTSEIFTDGI 195
E+ ++ T+ E I ++ WKI +FS E +S FT G
Sbjct: 243 EISDVQPNFPVTRIPRTMGTAERFKLIEFSPKNSRFTWKITQFSSFDGEEHSSYEFTVGP 302
Query: 196 QEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHIIAEEN 255
+ WK+ ++P+G GK LSLY+ D P LRVLDQL H E
Sbjct: 303 RRWKLVMYPKGNGDGKGNSLSLYLFASDYVTNGPKGGTLAIYKLRVLDQLNRNHCETECR 362
Query: 256 FWF-----DSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVT 301
+WF + S G +FLPL+ LH+ + D +++ E+ +++ T
Sbjct: 363 YWFPYNPVNQMDSLWGRPKFLPLEELHKSSRGFLVNDQIYIGVEISIVSTT 413
>AT1G58270.1 | Symbols: ZW9 | ZW9 | chr1:21612394-21614089 REVERSE
Length = 396
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 32/311 (10%)
Query: 5 MTMQISEKIPPYYAVEIQKFSAPKDYQV----TKYESEVFEAQEYKWKLVVH---LKGSK 57
+T + P Y V+ Q F QV KYES F Y W L+++ +
Sbjct: 85 VTTDTRTRPPNSYCVKFQSFVTMAK-QVKENGGKYESRPFSVGGYNWTLLIYPVIYIPTD 143
Query: 58 SKDHISLYLALADT--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLE 115
S ++S+Y+ + ++ + VYA + I Q ++E ++ FH K +
Sbjct: 144 SGGYVSIYVRVDNSSLITNPKDVYAEITFLAYKSSTDKYQISQ--ETEAQR--FHLFKQQ 199
Query: 116 WGFDKFINVAAFRDPSNGYLV-GDACVVGVEVISADKATITGKEESLSI-NKQGHVAKHL 173
WG +F+ + F +P+ GY G++ V GV++ I E+ + + + ++ +
Sbjct: 200 WGLLQFLPIYYFENPAYGYFFEGESVVFGVDI------NIVKPFENWEVFSNEQNIRDPI 253
Query: 174 --WKIEKFS-KLSETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPS 230
W++ KFS + ++ TS+ F+ G + W ++++P G LSLY+ N
Sbjct: 254 FEWRLTKFSTRFLDSYTSDSFSSGGRNWALKVYPNGVGNATGNSLSLYLLSDQSN----- 308
Query: 231 SKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLF 290
K Y LRV+DQ++ + + W ++T + G+ RFL + K D L
Sbjct: 309 DKGYVEAKLRVIDQIQSNNFEKKVAAWPNATENGWGFDRFLSFADIKNTSKGFLVNDTL- 367
Query: 291 VDAEVKVLAVT 301
EV++L+ +
Sbjct: 368 -KLEVQILSFS 377
>AT2G32880.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:13948953-13950505 REVERSE
Length = 318
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 33/291 (11%)
Query: 31 QVTKYESEVFEAQEYKWKLVVHLKGSKSKDHISLYLALAD--TLEPHILVYAVFRLYLLD 88
+V ++S F+ KW+L++ KD++S+ + + D P+ V F++ LL
Sbjct: 38 KVNNFQSLDFQVSGLKWRLLIQ-PAVGVKDYLSVAVWIIDEKCTGPNWEVKFNFKIGLLP 96
Query: 89 RKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEV-- 146
+ + + C ++++ G KFI ++ +LV D V E+
Sbjct: 97 QTGPEYFYVSVG-------CHNEKQPAQGVVKFITHTQLKER---FLVNDKAVFYAEISE 146
Query: 147 -------ISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLS-ETRTSEIFTDGIQEW 198
++ T+ E I + ++ WKI KFS + E +S FT G + W
Sbjct: 147 EVIPNFLVTGIPRTMGTAERFKLIEVARNNSRFTWKITKFSSFNGEEHSSYEFTVGPRRW 206
Query: 199 KIELHPEGTDLGKMEYLSLYVCLGDDNAI---DPSSKIYTHVTLRVLDQLKDKH--IIAE 253
K+ ++P GT GK LSLY L N + P + + LRVLDQL H I +
Sbjct: 207 KLVMYPRGTGDGKGNSLSLY--LNASNYVTNNGPKGRTFAVYKLRVLDQLHRNHFEIDCQ 264
Query: 254 ENFWFDSTRSR---HGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVT 301
+ F +D R G ++FLPL+ LH+ + D +++ E +++ T
Sbjct: 265 DWFLYDPVHPRLCSWGRTKFLPLEELHKASRGFLVNDQIYIGVEFLIVSTT 315
>AT5G26320.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr5:9238310-9241236 FORWARD
Length = 352
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 19/309 (6%)
Query: 5 MTMQISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKSK----- 59
+T + E+ P V I FS K + +ES FEA YKW+ ++ + G+++
Sbjct: 50 LTRVLREERPSSKIVTITSFSVIKG-RSEAFESSTFEAAGYKWRFMLFVNGNQNDPDGGH 108
Query: 60 DHISLYLALADT--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWG 117
++++LY+ + +T V +L++ + K H +L S+G + K WG
Sbjct: 109 ENMALYVGIKETESFPRGWEVNVDLKLFVHNEKLHKYLTV----SDGTVKRYEAAKTYWG 164
Query: 118 FDKFINVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIE 177
F I DP+ GY++ D G E+ + A K+E ++ WKI
Sbjct: 165 FGNLIPRTTLLDPNEGYILHDTLSFGAEISIVNPAE---KQEKITFISNPPDNVFTWKIL 221
Query: 178 KFSKL-SETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTH 236
+FS L ++ S+ F G + W++ +P+G + LS+++ A + +
Sbjct: 222 RFSTLENKFYYSDEFLVGDRYWRLGFNPKGYQGERPRALSIFLYAQGYKANAVITNTWGS 281
Query: 237 VTLRVLDQLKDKHIIAEENFWFDSTRSRHG--WSRFLPLDYLHRFKKSLQFEDVLFVDAE 294
V L++ +Q HI W + RS +G + + L+ L K D + +AE
Sbjct: 282 VNLQLKNQRSSNHIQLYSEAWC-AIRSGYGIEGNSIILLEDLQNSSKGYLVNDAIIFEAE 340
Query: 295 VKVLAVTNV 303
+ ++VTN+
Sbjct: 341 LVKVSVTNI 349
>AT2G04190.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:1427594-1430230 REVERSE
Length = 411
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 16/307 (5%)
Query: 5 MTMQISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQ-EYKWKLVVHLKGSKS---KD 60
+T + ++ P + + I FS + YES VFEA E+KW+L++++ G+++ +
Sbjct: 110 VTRTLRDEPPSHRILTITNFSEIIGRE-EPYESSVFEAYFEHKWRLILYVNGNQNDGGSN 168
Query: 61 HISLYLALADT--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGF 118
HISLYL +T L + V +L++ + K +L ++G + ++ + EWG+
Sbjct: 169 HISLYLRSEETDHLTYDGSINFVLKLFVYNGKQDKYLTV----TDGIQKRYNYKNKEWGY 224
Query: 119 DKFINVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEK 178
K I ++ F D S GYL D G E+ + K +S N +V WKI
Sbjct: 225 GKLIPLSTFLDTSQGYLEQDTASFGAEIFLCPPIQVQEKVTFIS-NPPNNV--FTWKILH 281
Query: 179 FSKLSE-TRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHV 237
FS L + S+ F + W++ ++P+GT G+ + + +++ S + V
Sbjct: 282 FSTLEDIVYYSDDFLVEDRYWRLGVNPKGTGDGRSQAIKIFLYAQGHKPNAVVSSTWGAV 341
Query: 238 TLRVLDQLKDKHI-IAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVK 296
LRV +Q H I + G + L L L+ K D + +AE+
Sbjct: 342 NLRVKNQRSSNHSQIYSAALYPIRNDYGVGVNTVLSLAELNDAVKEYLVNDSIIFEAEMV 401
Query: 297 VLAVTNV 303
++VTN+
Sbjct: 402 KVSVTNI 408
>AT5G26290.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr5:9226079-9227873 FORWARD
Length = 333
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 22/275 (8%)
Query: 35 YESEVFEAQEYKWKLVVHLKGSK---SKDHISLYLALADT--LEPHILVYAVFRLYLLDR 89
YES VFEA YKW+LV+++ G++ KDH+SLY + +T L V +L++ +
Sbjct: 72 YESSVFEAVGYKWRLVLYVNGNEKDGGKDHVSLYAKIVETESLPVGWEVNVDLKLFVYNG 131
Query: 90 KNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISA 149
K + +LI + ++ E G+ + I + F D ++GY D G E+
Sbjct: 132 KLNKYLIVTVKR-------YNNATKELGYGQLIPQSTFYDGNDGYREQDTGTFGAEIYIV 184
Query: 150 DKATITGKEESLSINKQGHVAKHLWKIEKFSKLSE-TRTSEIFTDGIQEWKIELHPEGTD 208
A K +S N +V WKI FS L + S F G + WK+ L+P+
Sbjct: 185 KPAQQKEKVTFIS-NPPDNV--FTWKILHFSTLEDKVYQSNEFLVGDRYWKLGLNPK--- 238
Query: 209 LGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWS 268
G + + LY NA+ ++ Y LR+ +Q H+ +W+
Sbjct: 239 -GGLVPIFLYAQGFKANAVVTTT--YAATNLRLKNQRSSNHVTTYTAYWYLIPSGLGLGV 295
Query: 269 RFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVTNV 303
+PL + K D + ++ E+ ++VTN+
Sbjct: 296 NTIPLSDVKDASKGYVVNDSIIIEVEMLTVSVTNI 330
>AT1G65150.2 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr1:24204167-24205558 REVERSE
Length = 296
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)
Query: 34 KYESEVFEAQEYKWKLVVHLKGSKSKDH---ISLYLALADTLEPHILVYAVFRLYLLDRK 90
KYES F + + W+LVVH KG+++ + +S+Y+ + P I V+A ++ +
Sbjct: 33 KYESPPFSSGAHNWRLVVHPKGNEADNGSGFVSMYVECLSSTTPPIDVFAYLTFFVFSEE 92
Query: 91 NHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGY-LVGDACVVGVEVISA 149
+L Q D E K+ F+ K WG K + V +D + G+ L G+ G V
Sbjct: 93 EKKYLSFQ--DVEVKR--FNSSKTVWGLSKALPVETLKDRAKGFILYGEEHEFGAHVKIV 148
Query: 150 DKATITGKEESLSINKQGHVAKHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTD 208
+ G E L +K W I F+ L + S+ F G ++W ++L+P+G D
Sbjct: 149 SRPASFG--EDLPFHKFS------WTIRDFALLEQNDYVSKTFHMGEKDWTLKLYPKG-D 199
Query: 209 LGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWS 268
+ L ++ L D + I+ V L+VLD H+ N W ++ G
Sbjct: 200 SEADDKLIQHLHLADGETLAKGELIFVRVNLKVLDPRGSNHLTGSLNCWLMNSNKAWGLP 259
Query: 269 RFLPLD 274
+ + D
Sbjct: 260 QSMSFD 265
>AT1G65150.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr1:24204167-24205558 REVERSE
Length = 296
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)
Query: 34 KYESEVFEAQEYKWKLVVHLKGSKSKDH---ISLYLALADTLEPHILVYAVFRLYLLDRK 90
KYES F + + W+LVVH KG+++ + +S+Y+ + P I V+A ++ +
Sbjct: 33 KYESPPFSSGAHNWRLVVHPKGNEADNGSGFVSMYVECLSSTTPPIDVFAYLTFFVFSEE 92
Query: 91 NHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGY-LVGDACVVGVEVISA 149
+L Q D E K+ F+ K WG K + V +D + G+ L G+ G V
Sbjct: 93 EKKYLSFQ--DVEVKR--FNSSKTVWGLSKALPVETLKDRAKGFILYGEEHEFGAHVKIV 148
Query: 150 DKATITGKEESLSINKQGHVAKHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTD 208
+ G E L +K W I F+ L + S+ F G ++W ++L+P+G D
Sbjct: 149 SRPASFG--EDLPFHKFS------WTIRDFALLEQNDYVSKTFHMGEKDWTLKLYPKG-D 199
Query: 209 LGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWS 268
+ L ++ L D + I+ V L+VLD H+ N W ++ G
Sbjct: 200 SEADDKLIQHLHLADGETLAKGELIFVRVNLKVLDPRGSNHLTGSLNCWLMNSNKAWGLP 259
Query: 269 RFLPLD 274
+ + D
Sbjct: 260 QSMSFD 265
>AT2G04170.5 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:1417660-1419156 REVERSE
Length = 369
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 13/221 (5%)
Query: 35 YESEVFEAQEYKWKLVVHLKGSKSKD---HISLYLALADT--LEPHILVYAVFRLYLLDR 89
YES VFEA YKW+LV+++ G+++ HISLY+ + +T L V +L++ +
Sbjct: 149 YESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNG 208
Query: 90 KNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISA 149
K +LI + +G ++ K EWG+ K I + F D + GYL D G E+ S
Sbjct: 209 KQRKYLIVK----DGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSG 264
Query: 150 DKATITGKEESLSINKQGHVAKHLWKIEKFSKLSET-RTSEIFTDGIQEWKIELHPEGTD 208
+ K +S N +V WKI FS L + S+ F + W++ +P+GT
Sbjct: 265 TAVQVQEKVTFIS-NPPNNV--FTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNPKGTG 321
Query: 209 LGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKH 249
G+ + + +++ ++ + V LR+ +Q H
Sbjct: 322 DGRSQAIPIFLYAQGHKPNAVATNTWGAVNLRLKNQRSSNH 362
>AT5G26300.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr5:9229326-9231033 FORWARD
Length = 349
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 16/305 (5%)
Query: 6 TMQISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGS---KSKDHI 62
T + ++ P + I FS K +V YES VFEA YKW+LV+++ G+ DHI
Sbjct: 51 TRVLRDERPSSKILTITNFSVIKG-RVEPYESSVFEAAGYKWRLVLYVNGNPNDSGNDHI 109
Query: 63 SLYLALADT--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDK 120
SLY+ + +T L V +L++ + K L + L S+G ++ K EWGF +
Sbjct: 110 SLYVRIEETEYLPRGWEVNVDLKLFIHNGK----LNKYLAISDGTLKLYNDAKREWGFGQ 165
Query: 121 FINVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFS 180
I F + + GY+ D G E+ A ++E ++ WKI FS
Sbjct: 166 LIPHVTFYN-TYGYIEQDIGSFGAEIFIVKPAQ---QQEKVTFISNPPTNVFTWKILHFS 221
Query: 181 KLSET-RTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTL 239
L + S+ F + W++ +P+G G+ L +++ A ++ + L
Sbjct: 222 ILEDKFYYSDDFLVEDRYWRLGFNPKGDGGGRPYALPIFLFAQGHKANAVATNTWGAANL 281
Query: 240 RVLDQLKDKHIIAEENFWFD-STRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVL 298
R+ +Q H W+ + G + + L L+ + + + +A + +
Sbjct: 282 RLKNQRSTNHRQIYTAAWYPIGSGYGVGVNNIILLADLNDASQGYLVNNAIIFEAAMVKV 341
Query: 299 AVTNV 303
+VTN+
Sbjct: 342 SVTNI 346
>AT1G65370.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr1:24284707-24285699 REVERSE
Length = 227
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 64 LYLALADTLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFIN 123
+Y+ + P I V+ ++ ++K++ +L Q D E K+ F K WG K ++
Sbjct: 1 MYVECLSSTTPPIDVFDYLSFFVFNKKDNKYLSIQ--DVEVKR--FSSSKTVWGLPKAMS 56
Query: 124 VAAFRDPSNGYLV-GDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKL 182
+ F DP+ G++V G+ C G V A + +++ K W I FS L
Sbjct: 57 LETFTDPAKGFIVEGEPCEFGAHVKIASSP--------VPVDENLPFHKFSWSIRDFSVL 108
Query: 183 SETRT-SEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRV 241
+ S+ F G + W + ++P+G E+ Y+ L D + P I LR
Sbjct: 109 KQNDCISKTFAMGGKNWTLTVYPKGDSEADNEFCK-YLHLADGEVLSPGEMISVRAQLRA 167
Query: 242 LDQLKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVL 298
LD KH W + G + L L L +++ ED L V+ E +V+
Sbjct: 168 LDPRGSKHKTVWLQQWIMAATKARGIPQSLSLADL---QEAYLDEDTLNVEIECEVV 221
>AT3G11910.1 | Symbols: UBP13 | UBP13 (UBIQUITIN-SPECIFIC PROTEASE
13); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr3:3761758-3770290 REVERSE
Length = 1115
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 20/160 (12%)
Query: 1 VASNMTMQISEKIPPYYAVEIQKFSAPKDYQVT------------KYESEVFEAQEYKWK 48
V M++++ P AVE P + T K+ S+VF YKW+
Sbjct: 25 VEGPQPMEVAQTDPAATAVENPPPEDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWR 84
Query: 49 LVVHLKGSKSKDHISLYLALAD--TLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKK 106
+++ KG+ + DH+S+YL +AD L Y+ F L ++++ N+ + IR+ +
Sbjct: 85 ILIFPKGN-NVDHLSMYLDVADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQ--- 140
Query: 107 ICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEV 146
F+ R+ +WGF F+ ++ +P+ GYLV D ++ EV
Sbjct: 141 --FNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEV 178
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 171 KHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDP 229
K W I F++L+ + S++F G +W+I + P+G ++ ++LS+Y+ + D +
Sbjct: 55 KFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVADAANLPY 111
Query: 230 SSKIYTHVTLRVLDQLKDKHIIAEE-NFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDV 288
Y+ +L V++Q+ +++ I +E F++ S G++ F+PL L+ + D
Sbjct: 112 GWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDT 171
Query: 289 LFVDAEVKVLAV 300
+ ++AEV V V
Sbjct: 172 VLIEAEVAVRKV 183
>AT2G25320.1 | Symbols: | LOCATED IN: chloroplast; CONTAINS
InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH
(InterPro:IPR002083); BEST Arabidopsis thaliana protein
match is: meprin and TRAF homology domain-containing
protein / MATH domain-containing protein
(TAIR:AT2G25330.1); Has 59993 Blast hits to 32072
proteins in 1426 species: Archae - 584; Bacteria - 5166;
Metazoa - 31897; Fungi - 4070; Plants - 2329; Viruses -
207; Other Eukaryotes - 15740 (source: NCBI BLink). |
chr2:10781951-10788065 REVERSE
Length = 1673
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 29/309 (9%)
Query: 20 EIQKFSAPKDY-QVTKYESEVFEAQEYKWKLVVHLKGSKSKDHISLYLALADT---LEPH 75
++ FS KD + K S VF A E ++ V+ S+++IS+ L +T L
Sbjct: 241 KVNNFSLFKDMIKTQKIMSPVFPAGECNLRISVYQSVVNSQEYISMCLESKETEKTLVSD 300
Query: 76 ILVYAVFRLYLLDRK-NHNHLIRQLPDSEGKKICFHKR--KLEWGFDKFINVAAFRDPSN 132
+ +FR+ L++K H+ R DS G+ +K G++ ++ ++ F +P
Sbjct: 301 RSCWCLFRMSALNQKPGCTHMHR---DSYGRFAADNKSGDNTSLGWNDYMKMSEFVNPEA 357
Query: 133 GYLVGDACVVGVEV--------ISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLSE 184
G+L+ D V + + I G+ + + GH+ K W+IE F++L +
Sbjct: 358 GFLLDDMAVFSTSFHVIKEFSSFTKNGGLIGGRNGAGARKSDGHMGKFTWRIENFTRLKD 417
Query: 185 ----------TRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIY 234
S+ F G ++ ++ ++P G +LS+++ + D + S
Sbjct: 418 LLKKRKITGLCIKSKRFQIGNRDCRLIVYPRGQSQPPC-HLSVFLEVTDSRSSSDWSCFV 476
Query: 235 THVTLRVLDQLKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAE 294
+H V +L++K + E + GW F+ L L +D + AE
Sbjct: 477 SHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAE 536
Query: 295 VKVLAVTNV 303
V +L T+
Sbjct: 537 VLILKETSA 545
>AT5G26280.2 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr5:9208724-9210403 FORWARD
Length = 327
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 28/301 (9%)
Query: 5 MTMQISEKIPPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKSKDHISL 64
+T ++ E+ P V I FS K + YES VFEA YKW
Sbjct: 50 VTRELREERPSSKIVTITSFSVIKG-RGEPYESSVFEAAGYKW----------------- 91
Query: 65 YLALADTLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINV 124
+ ++L V +L++ + K H +L ++G ++ K EWGF + I
Sbjct: 92 -IEETNSLPLGWEVNVDLKLFVHNGKLHKYLTV----TDGLVKRYNNAKKEWGFGQLIPR 146
Query: 125 AAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLSE 184
+ F + + GYL D G E+ A ++E ++ WKI +FS L +
Sbjct: 147 STFYNANEGYLDQDTGSFGAEIFIVKPAQ---QQEKVTFISNPPNNVFTWKILRFSTLED 203
Query: 185 T-RTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLD 243
S+ F + W++ +P+G G+ L +++ A ++ + V LR+ +
Sbjct: 204 KFYYSDDFLVEDRYWRLGFNPKGDGGGRPHALPIFLFAQGHKANAVATNTWGAVNLRLKN 263
Query: 244 QLKDKHIIAEENFWFD-STRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVTN 302
Q H W+ + G + + L L+ K D + +AE+ +++TN
Sbjct: 264 QRSTNHRQIYSAAWYPIGSGYGVGVNNIILLADLNDASKGYLVNDAIIFEAEMVKVSITN 323
Query: 303 V 303
+
Sbjct: 324 I 324
>AT5G06600.3 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEASE
12); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:2020682-2027834 REVERSE
Length = 985
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 34 KYESEVFEAQEYKWKLVVHLKGSKSKDHISLYLALAD--TLEPHILVYAVFRLYLLDRKN 91
K+ S+VF YKW++++ KG+ + DH+S+YL ++D +L YA F L ++++ +
Sbjct: 71 KHYSDVFVVGGYKWRILIFPKGN-NVDHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIH 129
Query: 92 HNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEV 146
+ +R+ + F+ R+ +WGF F+ ++ DPS GYLV D +V EV
Sbjct: 130 TRYTVRKETQHQ-----FNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEV 179
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 171 KHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDP 229
K W I FS+ + + S++F G +W+I + P+G ++ ++LS+Y+ + D ++
Sbjct: 56 KFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSDAASLPY 112
Query: 230 SSKIYTHVTLRVLDQLKDKHIIAEE-NFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDV 288
Y +L V++Q+ ++ + +E F++ S G++ F+PL L+ + D
Sbjct: 113 GWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDT 172
Query: 289 LFVDAEVKVLAV 300
+ V+AEV V V
Sbjct: 173 VLVEAEVAVRKV 184
>AT5G06600.1 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEASE
12); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:2019545-2027834 REVERSE
Length = 1116
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 34 KYESEVFEAQEYKWKLVVHLKGSKSKDHISLYLALAD--TLEPHILVYAVFRLYLLDRKN 91
K+ S+VF YKW++++ KG+ + DH+S+YL ++D +L YA F L ++++ +
Sbjct: 71 KHYSDVFVVGGYKWRILIFPKGN-NVDHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIH 129
Query: 92 HNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEV 146
+ +R+ + F+ R+ +WGF F+ ++ DPS GYLV D +V EV
Sbjct: 130 TRYTVRKETQHQ-----FNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEV 179
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 171 KHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDP 229
K W I FS+ + + S++F G +W+I + P+G ++ ++LS+Y+ + D ++
Sbjct: 56 KFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSDAASLPY 112
Query: 230 SSKIYTHVTLRVLDQLKDKHIIAEE-NFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDV 288
Y +L V++Q+ ++ + +E F++ S G++ F+PL L+ + D
Sbjct: 113 GWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDT 172
Query: 289 LFVDAEVKVLAV 300
+ V+AEV V V
Sbjct: 173 VLVEAEVAVRKV 184
>AT5G06600.2 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEASE
12); double-stranded DNA binding / ubiquitin
thiolesterase/ ubiquitin-specific protease |
chr5:2019545-2027834 REVERSE
Length = 1115
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 34 KYESEVFEAQEYKWKLVVHLKGSKSKDHISLYLALAD--TLEPHILVYAVFRLYLLDRKN 91
K+ S+VF YKW++++ KG+ + DH+S+YL ++D +L YA F L ++++ +
Sbjct: 70 KHYSDVFVVGGYKWRILIFPKGN-NVDHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIH 128
Query: 92 HNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEV 146
+ +R+ + F+ R+ +WGF F+ ++ DPS GYLV D +V EV
Sbjct: 129 TRYTVRKETQHQ-----FNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEV 178
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 171 KHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDP 229
K W I FS+ + + S++F G +W+I + P+G ++ ++LS+Y+ + D ++
Sbjct: 55 KFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSDAASLPY 111
Query: 230 SSKIYTHVTLRVLDQLKDKHIIAEE-NFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDV 288
Y +L V++Q+ ++ + +E F++ S G++ F+PL L+ + D
Sbjct: 112 GWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDT 171
Query: 289 LFVDAEVKVLAV 300
+ V+AEV V V
Sbjct: 172 VLVEAEVAVRKV 183
>AT3G46190.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:16965889-16967345 FORWARD
Length = 291
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 46/297 (15%)
Query: 11 EKIPPYYAVEIQKFSAPKDY-QVTKYESEVFEAQEYKWKLVVHLKGSK--SKDHISLYLA 67
E+ P Y+V + F + YES F W ++ G+ ++ I LY+
Sbjct: 29 ERPPTTYSVTFESFGKMMELVNNGYYESLPFTVDGINWTFKIYPNGNSDTTRGLIYLYVK 88
Query: 68 LADT--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVA 125
+ D+ +P + VYA + ++ + + Q E + + F + EWG ++I+V
Sbjct: 89 IDDSSITDPPLDVYAEIKFFVYNYGISEYYTYQ----EVEPVKFDSVQQEWG--RWIDVF 142
Query: 126 AFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLS-E 184
V +K+ + +E++S W + FS L+ +
Sbjct: 143 --------------------VAQRNKSEVFSYDENIS------NPVFTWSLPNFSTLTLD 176
Query: 185 TRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQ 244
+ TS+ F+ G + W ++++P G +GK LSLY+ + K Y TLRVL+Q
Sbjct: 177 SYTSDPFSSGDRNWVLKVYPNGDGVGKDNSLSLYLLSESN------EKNYVRATLRVLNQ 230
Query: 245 LKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVT 301
+ ++ W ++ + G+ F+PL L K +D+L + EV+++A++
Sbjct: 231 IGSDNVEKPVEGWPNAAENGWGYQEFIPLADLQDATKGFVVDDLL--EVEVEIMAIS 285
>AT2G42460.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:17676399-17679244 REVERSE
Length = 441
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 174 WKIEKFSKLSETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKI 233
WKIE FS TS +F+ G E + + P+G G +YLSLY+C+G+ ++ P K
Sbjct: 11 WKIENFSGRKFPITSTVFSSGGCECYVLIRPKGD--GFEDYLSLYLCVGNPKSLQPGWKR 68
Query: 234 YTHVTLRVLDQL-KDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVD 292
+ VL+Q K+ H +E F G+ LPL L + L + LF++
Sbjct: 69 RASLHFIVLNQSGKEVHRTSERYGLFGPEIPGWGFRTALPLTKLQ--DRELLENNTLFIE 126
Query: 293 AEVKVLAV 300
+KV V
Sbjct: 127 VYIKVTEV 134
>AT5G52330.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr5:21247596-21249732 REVERSE
Length = 397
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 170 AKHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAID 228
K+ WKI+KFS++S+ S +F G W I ++PEG D+ +LSL++C+ + + +
Sbjct: 19 GKNTWKIKKFSQISKREFASSVFEIGGYSWHILMYPEGCDVS--NHLSLFLCVANHDELL 76
Query: 229 PSSKIYTHVTLRVL--DQLKDKHIIAEENFWFDSTRSRH--GWSRFLPLDYLH 277
P T+ V+ D K K FW + H GW +F+ L L
Sbjct: 77 PGWSQLAQFTISVMHKDPKKSKFSDTLHRFW----KKEHDWGWKKFMELPKLR 125
>AT2G01790.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr2:341322-342480 REVERSE
Length = 269
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 168 HVAKHLWKIEKFSKLSETRT-SEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNA 226
K LW I FS L R S+IF G +W + PEG + +Y SLY+C+ D
Sbjct: 5 QAVKKLWVINNFSFLDSDRVYSDIFVVGGCKWCLLALPEGNNNYIYDYFSLYLCVPDSEY 64
Query: 227 IDPSSKIYTHVTLRVLDQLKDKHIIAEEN-FWFDSTRSRHGW-SRFLPLDYLHRFKKSLQ 284
+ + V+ +++Q+ + +E +WFD + G+ S F L + +K L
Sbjct: 65 LPSGWRRRAKVSFTMVNQVTGELSQQQEGVYWFDEKNTTQGFGSMFRLLVFQSSYKGFL- 123
Query: 285 FEDVLFVDAEVKVLAVTNV 303
V+ EV ++A +V
Sbjct: 124 ------VNGEVDIVAEVDV 136
>AT3G58210.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:21562645-21564067 REVERSE
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 171 KHLWKIEKFSKLSETRT--SEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAID 228
K W I+ FS S++R S F G +W++ ++PEG + ++LSL++ + D ++
Sbjct: 8 KFTWVIQNFSS-SQSRVVPSNQFVIGGCKWRLLVYPEGFNKSG-DHLSLFLEVADPRSLP 65
Query: 229 PSSKIYTHVTLRVLDQLKDKHIIAEEN---FWFDSTRSRHGWSRFLPLDYLHRFKKSLQF 285
P + L +++Q DK I++ N WF+ G S +PL LH
Sbjct: 66 PGWSRHARYLLTIVNQHSDK--ISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLV 123
Query: 286 EDVLFVDAEVKVLAV 300
D L + AEV VL V
Sbjct: 124 NDELKIVAEVNVLEV 138
>AT3G58200.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:21560086-21561358 REVERSE
Length = 319
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 171 KHLWKIEKFSKLSETRT-SEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDP 229
K W I+ FS L R S+IF G +W++ +P+G + SL++ + D +
Sbjct: 8 KFRWVIKNFSSLGSERVFSDIFVVGSCKWRLMAYPKGVRDNRC--FSLFLVVTDFKTLPC 65
Query: 230 SSKIYTHVTLRVLDQLKDK-HIIAEENFWFDSTRSRHGWSRFLPLDYL 276
K +T + L V++QL ++ I+ E WFD G+ LPL L
Sbjct: 66 DWKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTEL 113
>AT1G04300.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: TRAF-like
(InterPro:IPR008974), MATH (InterPro:IPR002083),
TRAF-type (InterPro:IPR013322); BEST Arabidopsis
thaliana protein match is: meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein (TAIR:AT5G43560.2); Has 15585 Blast hits to 9972
proteins in 679 species: Archae - 16; Bacteria - 1260;
Metazoa - 5683; Fungi - 2012; Plants - 671; Viruses -
109; Other Eukaryotes - 5834 (source: NCBI BLink). |
chr1:1148818-1153895 REVERSE
Length = 1074
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 28/135 (20%)
Query: 17 YAVEIQKFSAPKDYQVTKYE--SEVFEAQEYKWKLVVHLKGSKSKDHISLYLALA--DTL 72
Y +I KFS ++TK E S VFEA YKW ++++ +G +H+SL+L +A D L
Sbjct: 70 YTWKIPKFS-----EITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKL 124
Query: 73 EPHILVYAVFRLYLLDR-----KNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAF 127
P +A F + +L + K + L R F K++ +WG+ KF+ +
Sbjct: 125 LPGWSQFAQFTISVLSQDLKKSKFSDTLHR-----------FWKKEHDWGWKKFMELPKL 173
Query: 128 RDPSNGYLVGDACVV 142
+D G++ C+
Sbjct: 174 KD---GFIDESGCLT 185
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 170 AKHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAID 228
++ WKI KFS++++ S +F G +W I ++P+G D+ +LSL++C+ + + +
Sbjct: 68 GQYTWKIPKFSEITKREHRSNVFEAGGYKWYILIYPQGCDV--CNHLSLFLCVANYDKLL 125
Query: 229 PSSKIYTHVTLRVLDQ--LKDKHIIAEENFWFDSTRSRH--GWSRFLPLDYLHRFKKSLQ 284
P + T+ VL Q K K FW + H GW +F+ L L +
Sbjct: 126 PGWSQFAQFTISVLSQDLKKSKFSDTLHRFW----KKEHDWGWKKFMELPKLK--DGFID 179
Query: 285 FEDVLFVDAEVKVL 298
L ++A+V+V+
Sbjct: 180 ESGCLTIEAKVQVI 193
>AT3G58360.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr3:21593505-21594866 REVERSE
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 168 HVAKHL-WKIEKFSKL-SETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDN 225
+AK + W IE FS L S+ S+ F G +W+ ++P+G ++ +YL LY+ + D
Sbjct: 4 QLAKKITWAIENFSSLHSKKIYSDPFIVGGCKWRFLVYPKGNNV---DYLFLYLEVADYE 60
Query: 226 AIDPSSKIYTHVTLRVLDQLKDKHIIA-EENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQ 284
++ P + + L V++Q K EE WFD R G PL+ ++
Sbjct: 61 SLSPEWRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFL 120
Query: 285 FEDVLFVDAEVKVLAV 300
L + AE++VL V
Sbjct: 121 VNGELKIVAEIEVLEV 136
>AT1G65050.1 | Symbols: | meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein | chr1:24164286-24165679 REVERSE
Length = 228
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 34 KYESEVFEAQEYKWKLVVHLKGSKS---KDHISLYLALADTLEPHILVYAVFRLYLLDRK 90
KYES F + + W+LVV+ KG+++ + +S+Y+ + P I V+ ++ +
Sbjct: 33 KYESPPFSSGGHNWRLVVYPKGNEADNGRGFVSMYVECLSSTTPPIDVFVYLTFFVFSEE 92
Query: 91 NHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLV 136
+L Q D E K+ F+ K WG + + V +D + G+++
Sbjct: 93 EKRYLSIQ--DVEVKR--FNSSKTVWGLSQVLPVETLKDRAKGFIL 134