Jatropha Genome Database

JcCA0144381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0144381.10 - phase: 0 /partial
         (211 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59890.1 | Symbols:  | dihydrodipicolinate reductase family p...   367   e-102
AT3G59890.2 | Symbols:  | dihydrodipicolinate reductase family p...   367   e-102
AT2G44040.1 | Symbols:  | dihydrodipicolinate reductase family p...   363   e-101

>AT3G59890.1 | Symbols:  | dihydrodipicolinate reductase family
           protein | chr3:22124497-22126491 REVERSE
          Length = 349

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 170/211 (80%), Positives = 197/211 (93%)

Query: 1   MGKAVIKAADTAGLQILSVSFGSAEESGQTVQVCGKDIKIHGPSEREDVLASLYDEYPNL 60
           MGKAVIKAAD+AG+ I+  SFGS EE+GQTV+VCGK+I +HGP+ERE VL+S++++YP L
Sbjct: 86  MGKAVIKAADSAGVNIVPTSFGSVEEAGQTVEVCGKEILVHGPTEREKVLSSVFEKYPEL 145

Query: 61  IVVDYTVPSAVNDNANLYCKVGVPFVMGTTGGDRDLLYKTVEDSKVYAVISPQMGKQVVA 120
           IVVDYT+PSAVNDNA LY KVGVPFVMGTTGGDR  LYKTVE+SK+YAVISPQMGKQVVA
Sbjct: 146 IVVDYTIPSAVNDNAELYGKVGVPFVMGTTGGDRTRLYKTVEESKIYAVISPQMGKQVVA 205

Query: 121 FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMNQIQMI 180
           FLAAMEIM+EQFPGAF+GYSL+V+ESHQA KLD SGTAKAVISCFQKLGVS+DM+QIQ+I
Sbjct: 206 FLAAMEIMSEQFPGAFAGYSLEVMESHQASKLDASGTAKAVISCFQKLGVSYDMDQIQLI 265

Query: 181 RDPKLQIEMVGVPEDHLSGHAFHMYHLTSPD 211
           RDPK QIE+VGVPE+H+SGHAFH+YHLTSPD
Sbjct: 266 RDPKQQIEVVGVPEEHVSGHAFHLYHLTSPD 296


>AT3G59890.2 | Symbols:  | dihydrodipicolinate reductase family
           protein | chr3:22124497-22126369 REVERSE
          Length = 343

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 170/211 (80%), Positives = 197/211 (93%)

Query: 1   MGKAVIKAADTAGLQILSVSFGSAEESGQTVQVCGKDIKIHGPSEREDVLASLYDEYPNL 60
           MGKAVIKAAD+AG+ I+  SFGS EE+GQTV+VCGK+I +HGP+ERE VL+S++++YP L
Sbjct: 80  MGKAVIKAADSAGVNIVPTSFGSVEEAGQTVEVCGKEILVHGPTEREKVLSSVFEKYPEL 139

Query: 61  IVVDYTVPSAVNDNANLYCKVGVPFVMGTTGGDRDLLYKTVEDSKVYAVISPQMGKQVVA 120
           IVVDYT+PSAVNDNA LY KVGVPFVMGTTGGDR  LYKTVE+SK+YAVISPQMGKQVVA
Sbjct: 140 IVVDYTIPSAVNDNAELYGKVGVPFVMGTTGGDRTRLYKTVEESKIYAVISPQMGKQVVA 199

Query: 121 FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMNQIQMI 180
           FLAAMEIM+EQFPGAF+GYSL+V+ESHQA KLD SGTAKAVISCFQKLGVS+DM+QIQ+I
Sbjct: 200 FLAAMEIMSEQFPGAFAGYSLEVMESHQASKLDASGTAKAVISCFQKLGVSYDMDQIQLI 259

Query: 181 RDPKLQIEMVGVPEDHLSGHAFHMYHLTSPD 211
           RDPK QIE+VGVPE+H+SGHAFH+YHLTSPD
Sbjct: 260 RDPKQQIEVVGVPEEHVSGHAFHLYHLTSPD 290


>AT2G44040.1 | Symbols:  | dihydrodipicolinate reductase family
           protein | chr2:18221985-18223998 REVERSE
          Length = 347

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 167/211 (79%), Positives = 196/211 (92%)

Query: 1   MGKAVIKAADTAGLQILSVSFGSAEESGQTVQVCGKDIKIHGPSEREDVLASLYDEYPNL 60
           MGKAVIKAAD+AG+ I+ +SFGSA E GQ V+VCGK+I +HGP+ERE VL+S+++++P L
Sbjct: 84  MGKAVIKAADSAGVNIVPISFGSAGEDGQRVEVCGKEITVHGPTEREKVLSSVFEKHPEL 143

Query: 61  IVVDYTVPSAVNDNANLYCKVGVPFVMGTTGGDRDLLYKTVEDSKVYAVISPQMGKQVVA 120
           IVVDYT+PSAVNDNA LY KVGVPFVMGTTGGDR+ LY+TVE++K+YAVISPQMGKQVVA
Sbjct: 144 IVVDYTIPSAVNDNAELYSKVGVPFVMGTTGGDRNKLYETVEEAKIYAVISPQMGKQVVA 203

Query: 121 FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMNQIQMI 180
           FLAAMEIMAEQFPGAFSGYSL V+ESHQA KLD SGTAKAVISCFQ+LGVS+DM+QIQ+I
Sbjct: 204 FLAAMEIMAEQFPGAFSGYSLDVMESHQASKLDASGTAKAVISCFQELGVSYDMDQIQLI 263

Query: 181 RDPKLQIEMVGVPEDHLSGHAFHMYHLTSPD 211
           RDPK Q+EMVGVPE+H+SGHAFH+YHLTSPD
Sbjct: 264 RDPKQQVEMVGVPEEHISGHAFHLYHLTSPD 294