Jatropha Genome Database
- JcCA0143421.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0143421.10 - phase: 0
(607 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G49430.1 | Symbols: | transducin family protein / WD-40 repe... 753 0.0
AT2G47410.1 | Symbols: | nucleotide binding | chr2:19449133-194... 702 0.0
AT3G49660.1 | Symbols: | transducin family protein / WD-40 repe... 64 3e-10
AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE); nucle... 61 2e-09
AT1G62020.1 | Symbols: | coatomer protein complex, subunit alph... 61 3e-09
AT2G21390.1 | Symbols: | coatomer protein complex, subunit alph... 59 7e-09
AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide bindin... 59 1e-08
AT4G02730.1 | Symbols: | transducin family protein / WD-40 repe... 57 3e-08
AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic regu... 54 3e-07
AT2G43770.1 | Symbols: | transducin family protein / WD-40 repe... 53 4e-07
AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS... 53 6e-07
AT5G13480.1 | Symbols: FY | FY; protein binding | chr5:4326638-4... 52 8e-07
AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739... 50 6e-06
AT1G73720.1 | Symbols: | transducin family protein / WD-40 repe... 50 6e-06
AT5G64730.1 | Symbols: | transducin family protein / WD-40 repe... 49 7e-06
>AT5G49430.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:20037338-20045454 REVERSE
Length = 1677
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/606 (62%), Positives = 434/606 (71%), Gaps = 47/606 (7%)
Query: 1 MALRKYIPSADAPSVGMKPLNFFSKVHENAQHADPE--TTVEPDVDVDLREVYFLIMHFL 58
MALRK P D+ S+ MKPLNF K+ N Q DP+ +V P++D+DLREVYFL++H L
Sbjct: 1 MALRKNTPKGDSVSLPMKPLNFSRKLPGNVQIPDPDIVQSVAPNIDLDLREVYFLMLHLL 60
Query: 59 SAGPCHRTYGQFWNELLEHQLLPRRYHAWYSRNG----DENDDGLSFPLSYTKLVERYPH 114
S+GPC +TY +ELLEH+LLPRRYHAWYSR+G DENDDG SFPL+YT+L +RY H
Sbjct: 61 SSGPCQKTYALLRHELLEHELLPRRYHAWYSRSGLPSGDENDDGNSFPLNYTELAKRYSH 120
Query: 115 IEKDHXXXXXXXXX--XNAASKSQGLIGVNALNAAVVPTLMGTGSFSLLSNDRDAEKAQV 172
++KDH N + S+G+ N + A VPTL+GTGSFSLLS+D++ + +
Sbjct: 121 VKKDHLVELLKQLVFVSNRPNPSRGIGDGNKMIGAGVPTLLGTGSFSLLSSDKEIVGSDL 180
Query: 173 NHPPLHMRWPHMRADQVRGLGLREIGGGFSRHHRAPSVRAACYTIAKPSTMVQKMQNIKR 232
PP+ MRWPHM ADQVRG+ LREIGGGF+RHHRAPS+RAACY IAKPS+MVQKMQNIKR
Sbjct: 181 KPPPIGMRWPHMHADQVRGISLREIGGGFARHHRAPSIRAACYVIAKPSSMVQKMQNIKR 240
Query: 233 LRGHRNAVYCGMNFKIKLFNIHHLHSLKNIGPVSDTSLDVNPAAIFDRSGRYVITGSDDR 292
LRGHRNAVYC AI DRSGRYVITGSDDR
Sbjct: 241 LRGHRNAVYC---------------------------------AILDRSGRYVITGSDDR 267
Query: 293 LVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISILRG 352
LVK+WSM+TA+CLASCRGHEGDITD DC+IRVWRLPDGLP+S+LRG
Sbjct: 268 LVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRG 327
Query: 353 HTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRIYIPRPSDXXXXXXXXXX 412
HTGAVTAIAFSPRPGS YQLLSSSDDGTCRIWDAR + F+PRIY+PRP
Sbjct: 328 HTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRIYVPRPP-SPDGKNSGPS 386
Query: 413 XXXXXXXHQIFCCAFNANGTVFVTGSSDNLAR---VWNACKPNSDDSDQPNHEIDVLSGH 469
HQIFCCAFNA+G+VFVTGSSD LAR VW+A K N+DD +QPNHE+DVL+GH
Sbjct: 387 SSNAQQSHQIFCCAFNASGSVFVTGSSDTLARVYSVWSANKTNTDDPEQPNHEMDVLAGH 446
Query: 470 ENDVNYVQFSGCAVAPRFSLTDSSKEENAPKFRNSWFSHDNIVTCSRDGSAIIWIPRPRR 529
ENDVNYVQFSGCA +FS+TD SK+EN PKF+NSWF HDNIVTCSRDGSAIIWIPR RR
Sbjct: 447 ENDVNYVQFSGCAAGSKFSVTDYSKDENVPKFKNSWFCHDNIVTCSRDGSAIIWIPRLRR 506
Query: 530 SHGKVGRWTRHYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAAIMGN 589
SHGK RWTR YHLKV ILPTPRGVNMI WSLDNRFVLAAIM
Sbjct: 507 SHGKSCRWTRAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIAWSLDNRFVLAAIMD- 565
Query: 590 VCTVCM 595
C +C+
Sbjct: 566 -CRICV 570
>AT2G47410.1 | Symbols: | nucleotide binding |
chr2:19449133-19456991 FORWARD
Length = 1520
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/593 (59%), Positives = 407/593 (68%), Gaps = 47/593 (7%)
Query: 17 MKPLNFFSKVHENA--QHADPETTVEPDVDVDLREVYFLIMHFLSAGPCHRTYGQFWNEL 74
M+P N V N Q D +++ D+D+DLREVYFLI+HFLS GPC RT+G +E+
Sbjct: 11 MEPSNLAKLVQGNVPLQPHDSHSSLT-DLDMDLREVYFLILHFLSIGPCERTFGHLRDEI 69
Query: 75 LEHQLLPRRYHAWYSRNG----DENDDGLSFPLSYTKLVERYPHIEKDHXXXXXXXXXXN 130
LE LLPRRYH+W+SR+G +DDG+S PLSY L+ERYPHIEKDH N
Sbjct: 70 LEKGLLPRRYHSWWSRSGIYSGRADDDGISLPLSYDNLIERYPHIEKDHLVKLLKQLILN 129
Query: 131 AASKSQGLIGVNALNAAVVPTLMGTGSFSLLSNDRDAEKAQVNHPPLHMRWPHMRADQVR 190
+ S + NA NAA VPTL+G+G+FSL+ + E + H ++RWPHM ADQVR
Sbjct: 130 PSFPSHMRVEGNAPNAADVPTLLGSGTFSLVDRSNNIESQKARHVASYLRWPHMHADQVR 189
Query: 191 GLGLREIGGGFSRHHRAPSVRAACYTIAKPSTMVQKMQNIKRLRGHRNAVYCGMNFKIKL 250
GL LREIGGGF +HHRAPS+ +AC+ IAKPSTMVQKMQNIK+LRGHRNAVYC
Sbjct: 190 GLSLREIGGGFRKHHRAPSILSACHAIAKPSTMVQKMQNIKKLRGHRNAVYC-------- 241
Query: 251 FNIHHLHSLKNIGPVSDTSLDVNPAAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRG 310
AIFDRSGRYVITGSDDRLVKIWSMETA CLASCRG
Sbjct: 242 -------------------------AIFDRSGRYVITGSDDRLVKIWSMETALCLASCRG 276
Query: 311 HEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVY 370
HEGDITD D +IRVWRLPDG+PIS+LRGHTGAVTAIAFSPR SVY
Sbjct: 277 HEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVY 336
Query: 371 QLLSSSDDGTCRIWDARYSNFSPRIYIPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNAN 430
QLLSSSDDGTCRIWDARYS + PRIY+P PSD HQI CCA+NAN
Sbjct: 337 QLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTSNASQS-----HQILCCAYNAN 391
Query: 431 GTVFVTGSSDNLARVWNACKPNSDDSDQPNHEIDVLSGHENDVNYVQFSGCAVAPRFSLT 490
GT+FVTGSSD+ ARVW+A KPN DD++QP HE+DVL GHENDVNYVQFSGCAVAP+ S
Sbjct: 392 GTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRGHENDVNYVQFSGCAVAPKSSTA 451
Query: 491 DSSKEENAPKFRNSWFSHDNIVTCSRDGSAIIWIPRPRRSHGKVGRWTRHYHLKVXXXXX 550
D+ KE++ PKF+NSWF HDNIVTCSRDGSAIIW PR R+ HGK GRW + YHLKV
Sbjct: 452 DALKEDSYPKFKNSWFCHDNIVTCSRDGSAIIWTPRSRKFHGKSGRWMKGYHLKVPPPPL 511
Query: 551 XXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAAIMGNVCTVCMPTCLNTSI 603
LPTPRGVNMI+WSLDNRFVLAAIM C +C+ + S+
Sbjct: 512 PPQPPRGGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMD--CRICVWNAADGSL 562
>AT3G49660.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:18413690-18415223 FORWARD
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 24/171 (14%)
Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
F R++++ SDD+ +K+W +ET + + GH D +R
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSN-FSPRIY 396
+W + G + +L H+ VTA+ F+ R GS+ ++SSS DG CRIWD+ + I
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFN-RDGSL--IVSSSYDGLCRIWDSGTGHCVKTLID 195
Query: 397 IPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWN 447
P + F+ NG + G+ DN R+WN
Sbjct: 196 DENP--------------------PVSFVRFSPNGKFILVGTLDNTLRLWN 226
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 82/208 (39%), Gaps = 38/208 (18%)
Query: 278 FDRSGRYVITGSDDRLVKIWSMET-----AFCLASCRGHEGDITDXXXXXXXXXXXXXXX 332
F GR + + S D+ ++ +++ T A + GHE I+D
Sbjct: 32 FSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASD 91
Query: 333 DCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFS 392
D +++W + G I L GHT + F+P+ ++S S D T RIWD
Sbjct: 92 DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN---MIVSGSFDETVRIWDVTTGKCL 148
Query: 393 PRIYIPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACKPN 452
+P SD + FN +G++ V+ S D L R+W++
Sbjct: 149 K--VLPAHSD------------------PVTAVDFNRDGSLIVSSSYDGLCRIWDS---- 184
Query: 453 SDDSDQPNHEIDVLSGHEN-DVNYVQFS 479
H + L EN V++V+FS
Sbjct: 185 -----GTGHCVKTLIDDENPPVSFVRFS 207
>AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE);
nucleotide binding | chr5:5504541-5509266 REVERSE
Length = 876
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 283 RYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 342
+ + + R +++W +ET C+ S +GHEG + D + VW +
Sbjct: 73 KLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVD 132
Query: 343 DGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPR 394
G RGH G V++I F P L+S SDD T R+WD N +
Sbjct: 133 GGFCTHYFRGHKGVVSSILFHPDSNKNI-LISGSDDATVRVWDLNAKNTEKK 183
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 74/212 (34%), Gaps = 24/212 (11%)
Query: 259 LKNIGPVSDTSLDVNPAAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDX 318
LK V+ D+N A+ R+ V TGS+DR IW + + + +GH+ I
Sbjct: 489 LKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 319 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDD 378
D +++W + DG + GHT +V +F Q +S D
Sbjct: 548 EFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDG---TQFVSCGAD 604
Query: 379 GTCRIWDARYSNFSPRIYIPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 438
G ++W+ S +++ A + TG
Sbjct: 605 GLLKLWNVNTSE--------------------CIATYDQHEDKVWALAVGKKTEMIATGG 644
Query: 439 SDNLARVWNACKPNSDDSDQPNHEIDVLSGHE 470
D + +W+ + + D E +L G E
Sbjct: 645 GDAVINLWHDSTASDKEDDFRKEEEAILRGQE 676
>AT1G62020.1 | Symbols: | coatomer protein complex, subunit alpha,
putative | chr1:22919814-22923728 FORWARD
Length = 1216
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 80/208 (38%), Gaps = 17/208 (8%)
Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
F S ++G DD +K+W+ + CL + GH I D IR
Sbjct: 59 FHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA---RYSNFSPR 394
+W +S+L GH V +F P+ V +S+S D T R+WD R SP
Sbjct: 119 IWNWQSRTCVSVLTGHNHYVMCASFHPKEDLV---VSASLDQTVRVWDIGALRKKTVSPA 175
Query: 395 IYIPR----PSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACK 450
I R SD + AF+ + V+G+ D ++W
Sbjct: 176 DDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM-- 233
Query: 451 PNSDDSDQPNHEIDVLSGHENDVNYVQF 478
++ E+D L GH N+V+ V F
Sbjct: 234 -----NETKAWEVDTLRGHMNNVSSVMF 256
>AT2G21390.1 | Symbols: | coatomer protein complex, subunit alpha,
putative | chr2:9152428-9156577 FORWARD
Length = 1218
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 82/208 (39%), Gaps = 17/208 (8%)
Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
F S ++G DD +K+W+ +T CL + GH I D IR
Sbjct: 59 FHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIR 118
Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA---RYSNFSPR 394
+W IS+L GH V +F P+ V +S+S D T R+WD + + SP
Sbjct: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLV---VSASLDQTVRVWDIGALKKKSASPA 175
Query: 395 IYIPR----PSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACK 450
+ R SD + +F+ + V+G+ D ++W
Sbjct: 176 DDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRM-- 233
Query: 451 PNSDDSDQPNHEIDVLSGHENDVNYVQF 478
++ E+D L GH N+V+ V F
Sbjct: 234 -----NETKAWEVDTLRGHMNNVSSVMF 256
>AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide binding |
chr2:17304319-17306855 REVERSE
Length = 554
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 270 LDVNPAAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXX 329
LD F SG+Y+ T S D+ ++W + T L GH +
Sbjct: 339 LDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAAS 398
Query: 330 XXXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 387
D + RVW L G I + +GH V ++ FSP + Y L S +D CRIWD R
Sbjct: 399 CGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSP---NGYHLASGGEDNQCRIWDLR 453
>AT4G02730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:1207759-1209066 FORWARD
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 30/191 (15%)
Query: 284 YVITGSDDRLVKIWSMETAF-CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 342
Y + SDD ++IW + + CL RGH + D IR+W +
Sbjct: 99 YTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK 158
Query: 343 DGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR--------------- 387
G + +++ H+ ++++ F+ R GS+ ++S+S DG+C+IWDA+
Sbjct: 159 TGKCVRMIKAHSMPISSVHFN-RDGSL--IVSASHDGSCKIWDAKEGTCLKTLIDDKSPA 215
Query: 388 --YSNFSPR----IYIPRPSDXXXXXXXXXXXXXXXXXH--QIFC--CAFN-ANGTVFVT 436
++ FSP + S H ++FC AF+ NG V+
Sbjct: 216 VSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVS 275
Query: 437 GSSDNLARVWN 447
GS DN +W+
Sbjct: 276 GSEDNCVYLWD 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 30/186 (16%)
Query: 269 SLDVNPAAI----FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXX 324
+L+ + AAI F G + + S D+ + +WS + GH I+D
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 325 XXXXXXXXDCIIRVW--RLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCR 382
DC +R+W R P + +LRGHT V + F+P P ++ ++S S D T R
Sbjct: 98 HYTCSASDDCTLRIWDARSPYEC-LKVLRGHTNFVFCVNFNP-PSNL--IVSGSFDETIR 153
Query: 383 IWDARYSNFSPRIYIPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNL 442
IW+ + I I FN +G++ V+ S D
Sbjct: 154 IWEVKTGKCVRMI--------------------KAHSMPISSVHFNRDGSLIVSASHDGS 193
Query: 443 ARVWNA 448
++W+A
Sbjct: 194 CKIWDA 199
>AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) | chr3:5671133-5675106 FORWARD
Length = 479
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
FD S + TGS DR +KIW + T + GH G + D ++
Sbjct: 178 FDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVK 237
Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 387
W L I GH V +A P ++ +L+ D CR+WD R
Sbjct: 238 CWDLEQNKVIRSYHGHLHGVYCLALHP---TLDVVLTGGRDSVCRVWDIR 284
>AT2G43770.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:18134272-18135303 REVERSE
Length = 343
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 95/261 (36%), Gaps = 35/261 (13%)
Query: 228 QNIKRLRGHRNAV----YCGMNFKI------KLFNIHHLHSLKNIGPVSDTSLDVNPAAI 277
+N L+GH+NA+ + +I K + + K I +++ S VN
Sbjct: 87 KNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCP 146
Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
R +I+GSDD K+W M + + + IT D ++
Sbjct: 147 TRRGPPLIISGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDAADKIFTGGVDNDVK 205
Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRIYI 397
VW L G L GH +T ++ SP GS Y L + D+ C +WD R Y
Sbjct: 206 VWDLRKGEATMTLEGHQDTITGMSLSPD-GS-YLLTNGMDNKLC-VWDMRP-------YA 255
Query: 398 PRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACKPNSDDSD 457
P+ + C+++ +GT GSSD + +W+
Sbjct: 256 PQ-----NRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTS------- 303
Query: 458 QPNHEIDVLSGHENDVNYVQF 478
I L GH VN F
Sbjct: 304 --RRTIYKLPGHTGSVNECVF 322
>AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS
1); basal transcription repressor/ nucleotide binding /
protein binding | chr4:9023775-9027443 FORWARD
Length = 486
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
FD S + TGS DR +KIW + T + GH + D ++
Sbjct: 184 FDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVK 243
Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 387
W L I GH V +A P ++ LL+ D CR+WD R
Sbjct: 244 CWDLEQNKVIRSYHGHLSGVYCLALHP---TLDVLLTGGRDSVCRVWDIR 290
>AT5G13480.1 | Symbols: FY | FY; protein binding |
chr5:4326638-4331557 REVERSE
Length = 647
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 285 VITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDG 344
+++G D+LVK+W + L S GH+ + D II+++ +
Sbjct: 264 LVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTM 323
Query: 345 LPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRIYIPRPSDXX 404
+ RGHT VT++A+ P + +S S DG+ W + N P+I IP D
Sbjct: 324 KELQSFRGHTKDVTSLAWHPCHEEYF--VSGSSDGSICHWIVGHEN--PQIEIPNAHD-- 377
Query: 405 XXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACKPNSDDSD 457
+ ++ A++ G + +GS+D+ + W +P + D
Sbjct: 378 ---------------NSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPADNPRD 415
>AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739363
FORWARD
Length = 1021
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 64/179 (35%), Gaps = 23/179 (12%)
Query: 269 SLDVNPAAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXX 328
S +VN +I ++ R ++TG DD V +WS+ S GH +
Sbjct: 15 SGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVL 74
Query: 329 XXXXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARY 388
+I++W L + + GH +A+ F P G L S S D R+WD R
Sbjct: 75 AGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF-GEF--LASGSSDTNLRVWDTRK 131
Query: 389 SNFSPRIYIPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWN 447
I F+ +G V+G DN+ +VW+
Sbjct: 132 KGC--------------------IQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWD 170
>AT1G73720.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:27725059-27729722 FORWARD
Length = 511
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
F R + +GS D +KIW + T C+ H +T D R
Sbjct: 271 FSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSN 390
+ L G + RGHT V F+ GS +++++S D T ++WD++ ++
Sbjct: 331 IHGLKSGKLLKEFRGHTSYVNHAIFTS-DGS--RIITASSDCTVKVWDSKTTD 380
>AT5G64730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:25873146-25875021 FORWARD
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 275 AAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDC 334
AA F+ G Y +T DR +++W+ + + + H ++ D D
Sbjct: 23 AARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDR 82
Query: 335 IIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSP 393
+ W + G I RGH G V A+ F+ V +S+ D + R+WD R + P
Sbjct: 83 QVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVV---VSAGFDRSLRVWDCRSHSVEP 138