Jatropha Genome Database
- JcCA0142031.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0142031.30 - phase: 1 /pseudo/partial
(380 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61350.1 | Symbols: SKIP4 | SKIP4 (SKP1 INTERACTING PARTNER 4... 324 7e-89
AT1G55270.1 | Symbols: | kelch repeat-containing F-box family p... 104 9e-23
AT1G30090.1 | Symbols: | kelch repeat-containing F-box family p... 91 2e-18
AT2G24540.1 | Symbols: AFR | AFR (ATTENUATED FAR-RED RESPONSE) |... 81 1e-15
AT1G22040.1 | Symbols: | kelch repeat-containing F-box family p... 72 8e-13
AT1G16250.1 | Symbols: | kelch repeat-containing F-box family p... 71 1e-12
AT4G39590.1 | Symbols: | kelch repeat-containing F-box family p... 64 2e-10
AT2G29830.1 | Symbols: | kelch repeat-containing F-box family p... 60 2e-09
AT1G67480.2 | Symbols: | kelch repeat-containing F-box family p... 59 5e-09
AT1G67480.1 | Symbols: | kelch repeat-containing F-box family p... 59 5e-09
AT2G29780.1 | Symbols: | kelch repeat-containing F-box family p... 58 9e-09
AT2G29770.1 | Symbols: | kelch repeat-containing F-box family p... 54 2e-07
AT2G21950.1 | Symbols: SKIP6 | SKIP6 (SKP1 interacting partner 6... 52 9e-07
AT3G63220.2 | Symbols: | kelch repeat-containing F-box family p... 51 1e-06
AT3G63220.1 | Symbols: | kelch repeat-containing F-box family p... 51 1e-06
AT3G27910.1 | Symbols: | kelch repeat-containing protein | chr3... 50 3e-06
>AT3G61350.1 | Symbols: SKIP4 | SKIP4 (SKP1 INTERACTING PARTNER 4) |
chr3:22703203-22704374 FORWARD
Length = 358
Score = 324 bits (830), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 178/373 (47%), Positives = 237/373 (63%), Gaps = 28/373 (7%)
Query: 13 ERISQLEESQGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKH 72
+R Q E+Q LI G+PDDI+ CLARVPR+YH +KCV RRWRD VC+ E YR +
Sbjct: 9 QRAGQSNETQIALISGVPDDISKSCLARVPREYHMAMKCVSRRWRDFVCSDEMCDYRNEF 68
Query: 73 NLSETWIYALCRDKFERICCYVLDPDSSRRSWKLIQGLPPRCLKRKGIGFEALGKKLLSV 132
NL+E+WIYALCRD + ++L+P SSRRSWK I P + R+G+GF LGK+L
Sbjct: 69 NLAESWIYALCRDISGGVFLHMLNPFSSRRSWKRINDYPYIPM-REGMGFAVLGKRLF-- 125
Query: 133 RWLWLVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNN--FGIVKLPTPLFRCYFACEVL 190
++G C ++ + +YC N F +V P RCYFACE L
Sbjct: 126 ----VLGGC-----------GWLEDATDEIYCYDAAMNTWFDVVP-PLSTKRCYFACETL 169
Query: 191 DGRIYAIGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVEDSIVLDGKIYIRCGASS 250
DG+I AIGGLG + +WD +DP + +S SD N++P++EDS V+DG+IYIR G
Sbjct: 170 DGKIIAIGGLGLNPNAKRTWDIYDPLTRTCKSCSDVNIVPEMEDSFVMDGRIYIRGGVGG 229
Query: 251 VSSHVYAVLYEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWQKDKRVW 310
S+ VY+ S+G W+ D DM SGWRGPAVVV G LYVLDQ+ G +L MW KD R+W
Sbjct: 230 SSTAVYSA----SSGIWERMDDDMASGWRGPAVVVAGDLYVLDQTFGAKLTMWCKDTRMW 285
Query: 311 VAVGRLSALLTRPPCRLVATGKRIFIIGKGLSTVVFDID--KTGNMEGVLVSSSIPRINS 368
+ +G+LS L+ + PCRLV+ G IF+IGK STVV D++ + M GV+V SSIP+
Sbjct: 286 IHIGKLSQLVMKQPCRLVSIGNSIFVIGKDCSTVVIDVENVRKNKMNGVMVCSSIPKTWD 345
Query: 369 ED-DIISCKCVAL 380
+D D+ISCK VA+
Sbjct: 346 DDIDVISCKSVAI 358
>AT1G55270.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:20618333-20619925 REVERSE
Length = 434
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 147/335 (43%), Gaps = 31/335 (9%)
Query: 22 QGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWIYA 81
Q PL+ G+PDD+A+ CL RVPR H L+ VC+RW L +++ R +SE W+Y
Sbjct: 75 QPPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYV 134
Query: 82 LCRDKFERICCYVLDPDSSRRSWKLIQGLPPRCLKRKGIGFEALGKKLLSVRWLWLVGRC 141
RD+ +I DP S +L Q LPP + R+ G +LS L+L G
Sbjct: 135 FKRDRDGKISWNTFDPIS-----QLWQPLPP--VPREYSEAVGFGCAVLSGCHLYLFGGK 187
Query: 142 Y**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLF-RCYFACEVLDGRIYAIGGL 200
L +++ N + + P L R +F C V++ +Y GG
Sbjct: 188 D----------PLRGSMRRVIFYNARTNKWH--RAPDMLRKRHFFGCCVINNCLYVAGGE 235
Query: 201 GSKLSDP-HSWDTFDPHKNSWESHSDGNVIPDVEDSIVLDGKIYIRCGASSVSSH--VYA 257
+ S + +DP+KN W +D + +V D K +++ + SH V +
Sbjct: 236 CEGIQRTLRSAEVYDPNKNRWSFIADMSTAMVPLIGVVYDKKWFLK----GLGSHQLVMS 291
Query: 258 VLYEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWQKDKRVWVAVGRLS 317
Y+P +W MV+GWR P ++G LY LD G +L ++ + W
Sbjct: 292 EAYDPEVNSWSPVSDGMVAGWRNPCTSLNGRLYGLDCRDGCKLRVFDESTDSWNKFMDSK 351
Query: 318 ALL----TRPPCRLVATGKRIFIIGKGLSTVVFDI 348
A L + LV ++ II +S + D+
Sbjct: 352 AHLGNSKSLEAAALVPLHNKLCIIRNNMSMSLVDV 386
>AT1G30090.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:10559746-10560942 REVERSE
Length = 398
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 154/370 (41%), Gaps = 59/370 (15%)
Query: 13 ERISQLEES--QGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAE-WHAYR 69
+R S+LE S PLI G+PDD+AL CL RVP + H K VC+RW L E + A R
Sbjct: 39 DRSSELELSLRGEPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKR 98
Query: 70 GKHNLSETWIYALCRDK-FERICCYVLDPDSSRRSWKLIQGLPPR-----------CLKR 117
+ + W++ + + +I VLD +W I +P R + R
Sbjct: 99 KEFGFKDPWLFVVGFSRCTGKIQWKVLD--LRNLTWHEIPAMPCRDKVCPHGFRSVSMPR 156
Query: 118 KGIGFEALGKKLLSVRWLWLVGRCY**SLLL*YF*QLMD*SCFLVYCKK---LKNNFGIV 174
+G F G + D C L K +KN++ +
Sbjct: 157 EGTMFVCGG--------------------------MVSDSDCPLDLVLKYDMVKNHWTVT 190
Query: 175 -KLPTPLFRCYFACEVLDGRIYAIGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVE 233
K+ T R +FA V+DG IYA GG + L + + +P +W S+
Sbjct: 191 NKMITA--RSFFASGVIDGMIYAAGGNAADLYELDCAEVLNPLDGNWRPVSNMVAHMASY 248
Query: 234 DSIVLDGKIYIRCG---ASSVSSHVYAVLYEPSNGTWQHADADMVSGWRGPAVVVDGTLY 290
D+ VL+GK+ + G VS +Y+P W+ + GW G +VV+ L+
Sbjct: 249 DTAVLNGKLLVTEGWLWPFFVSPR--GQVYDPRTDQWETMSMGLREGWTGTSVVIYDRLF 306
Query: 291 VLDQSSGTRLMMWQKDKRVWVAVGRLSALLTRPPCRLVAT---GKRIFIIGKGLSTVVFD 347
++ + ++ ++ W + L CR A G R++++G+ L V +
Sbjct: 307 IVSELERMKMKVYDPVTDSWETIN--GPELPEQICRPFAVNCYGNRVYVVGRNLHLAVGN 364
Query: 348 IDKTGNMEGV 357
I ++ N V
Sbjct: 365 IWQSENKFAV 374
>AT2G24540.1 | Symbols: AFR | AFR (ATTENUATED FAR-RED RESPONSE) |
chr2:10426414-10427532 FORWARD
Length = 372
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 130/324 (40%), Gaps = 23/324 (7%)
Query: 24 PLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWIYALC 83
PLI G+P+DIA CL R+P YH + + V W + N + + ++S +++
Sbjct: 27 PLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRFLFSKQSLSISSPYLFVFA 86
Query: 84 RDK-FERICCYVLDPDSSRRSWKLIQGLPPRCLKRKGIGFEALGKKLLSVRWLWLVGRCY 142
+K RI LD S R W ++ +P K + + L G
Sbjct: 87 FNKSTARIQWQSLDLASGR--WFVLPPMPNSFTKISSPHALSCASMPRQGKLFVLGGG-- 142
Query: 143 **SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYFACEVLDGRIYAIGG-LG 201
D + V L N + + P R YF ++G+I A+GG +G
Sbjct: 143 -------------DVNRSAVVYTALTNRWSCIS-PMMSPRTYFVSGNVNGKIMAVGGSVG 188
Query: 202 SKLSDPHSWDTFDPHKNSWESHSDGNVIPDVEDSIVLDGKIYIRCG-ASSVSSHVYAVLY 260
+++DP ++W ++ DS V+ ++ + G A +Y
Sbjct: 189 GNGEATTEVESYDPDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGWAWPFMFPPMGQVY 248
Query: 261 EPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWQKDKRVW--VAVGRLSA 318
+ GTW+ M GW G +VV+ L+V+ + + ++ D W V+ +L
Sbjct: 249 DSDEGTWREMSGGMKEGWTGVSVVIRDRLFVISEHGDFPMKVYCSDDDTWRYVSGEKLQG 308
Query: 319 LLTRPPCRLVATGKRIFIIGKGLS 342
R P + R+F++ G++
Sbjct: 309 EKMRRPFAVTGADDRVFVVASGIN 332
>AT1G22040.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:7768370-7769797 FORWARD
Length = 475
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 34/249 (13%)
Query: 25 LICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWIYALCR 84
LI +PD++++ LAR+PR ++ ++ V RRWR V +E ++ R + +E W+Y L +
Sbjct: 43 LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102
Query: 85 DKFERICCYVLDPDSSRRSWKLIQGLPPRCLKRKGIGFEALGKKLLSVRWLWLVGRCY** 144
+++ Y LDP S++ W Q LPP + + +E +K LS W ++ +
Sbjct: 103 GHEDKLLWYALDPVSTK--W---QRLPPMPV----VVYEEESRKSLSGLWN-MITPSFNV 152
Query: 145 SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYFACEVLDGRIYAIGGLGSKL 204
++ F D S + +C C A +DG +Y IGGL
Sbjct: 153 GAIVRSFLGRRDSSEQMPFCG-----------------C--AIGAVDGGLYVIGGLSRSK 193
Query: 205 SDPHSWDTFDPHKNSWESHSDGNVIPDVEDSIVLDGKIY----IRCGASSVSSHVYAVLY 260
+ W FDP NSW S + VL+ K+Y + G +S A +Y
Sbjct: 194 TVSCVW-RFDPILNSWSEVSSMLASRAYSKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVY 252
Query: 261 EPSNGTWQH 269
+PS W
Sbjct: 253 DPSTDAWSE 261
>AT1G16250.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:5557214-5558697 FORWARD
Length = 383
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 18 LEESQGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSET 77
+E + +I G+PDD+AL C+A++ YH VL+CV R WRDLV A++ Y+ ++ S +
Sbjct: 1 MESIEQSIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGS 60
Query: 78 WIYALCRDKFERICCYVLDPDSSRRSWKLIQGLPPRCLKRKGIGFEALGKKLLSV-RWLW 136
W++ L + Y DP++ R W + PR + G+ G + V L
Sbjct: 61 WLFVLTERSKNQWVAY--DPEADR--WHPL----PRTRAVQD-GWHHSGFACVCVSNCLL 111
Query: 137 LVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYFACEVLDGRIYA 196
++G CY S+ + + + + K + + TP R +FAC + G++Y
Sbjct: 112 VIGGCYAPSVSSFPHQKPVVTKDVMRFDPFKKQWKMVASMRTP--RTHFACTSVSGKVYV 169
Query: 197 IGGLGSKLSDP-HSWDTFDPHKNSWE 221
GG S S + +DP + WE
Sbjct: 170 AGGRNLTHSRGIPSAEVYDPVADRWE 195
>AT4G39590.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18387515-18388723 REVERSE
Length = 402
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 132/339 (38%), Gaps = 57/339 (16%)
Query: 26 ICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWIYALCRD 85
I +P+D+ L C ARV R Y+ L V +R+R +V + E + R N +E +Y R
Sbjct: 38 IDSLPNDLLLNCFARVSRMYYPALSRVSKRFRSIVTSPEIYNTRSLLNRTEKCLYLCLRF 97
Query: 86 KFERICCYVL---DPDSSRRSWKLIQGLPPRCLKRKGIGFEALGKKLLSVRWLWLVGRCY 142
F+ + +P+ + +Q P+ A+G + +
Sbjct: 98 PFDNNTHWFTLYQNPNRTVSDKVFLQIPSPQYPLTLSSNLVAVGSNIYRIGG-------- 149
Query: 143 **SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTP---------LFRCYFACEVLDGR 193
+ D SC L + ++ + I+ + L R V+DG+
Sbjct: 150 ----------TVGDDSCPLGFDREPSSKVSILDCRSHTWRDGPRMRLNRRSSTTSVVDGK 199
Query: 194 IYAIGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVED--------SIVLDGKIYIR 245
IY GG + H + FDP SW + ++ +++ E+ SI DGK+Y+
Sbjct: 200 IYVTGGTEDTDNPSHWIEVFDPKTQSWGTVTNPHIVKVWEEVCYRRAVKSIGHDGKLYL- 258
Query: 246 CGASSVSSHVYAVLYEPSNGTWQHADADMVSGWR--GPAVVVDGTLYVLDQSSGTRLMMW 303
S Y V+Y+P G W + + G+ VVD L+ DQ + W
Sbjct: 259 ------SGDKY-VVYDPDEGKWNSVEEHWLIGYAIGSSNCVVDNILFYWDQG----VFKW 307
Query: 304 QKDK-RVWVAVGRLSAL----LTRPPCRLVATGKRIFII 337
K W + L L R C+LV G ++ ++
Sbjct: 308 YDSKVSSWKQLKGLEGLPDDFSQREYCKLVDLGGKMAVL 346
>AT2G29830.1 | Symbols: | kelch repeat-containing F-box family
protein | chr2:12730411-12731562 REVERSE
Length = 383
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 142/358 (39%), Gaps = 65/358 (18%)
Query: 9 EGGSERISQLEESQGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAY 68
E Q E P++ +P+++ +A +PR ++ L V R +R L+ + E +
Sbjct: 13 EDNQNENPQEEVENLPILLQLPEELIASIVALIPRCHYPSLSLVSRAFRHLITSQELYVA 72
Query: 69 RGKHNLSETWIYALC-RDKFERICCYVLDPDSSRRSWKLIQGLPPRCLKRKGIGFEALGK 127
R +E +YAL + R + L + I+ LPP G
Sbjct: 73 RSNLGFTEPVLYALIGFQAYTRPSWFFLRRSNFPLQLHRIRSLPPMLS----------GA 122
Query: 128 KLLSVRW-LWLVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVK--------LP- 177
++++ + ++++G C + Y +N ++ LP
Sbjct: 123 AVVTIDYKMYVMGGC-------------------IGYNHPASSNVIVIDCRFHTWKYLPD 163
Query: 178 TPLFRCYFACEVLDGRIYAIGGLGSKLSDPHSW-DTFDPHKNSWES-----HSDGNVIPD 231
RC A ++DGRIY IGG + +D W + FD SWE+ +D N +
Sbjct: 164 MKRARCRAATGIIDGRIYVIGGCKKQDAD---WVEVFDVTTQSWETVPSECPNDANENGE 220
Query: 232 VEDSIVLDGKIYIRCGASSVSSHVYAVLYEPSNGTWQHAD--ADMVSGWR-GPAVVVDGT 288
+V+ G+++I S YEP G W+ D ++++ W + VV
Sbjct: 221 FITYVVMQGRLFILDLECCFS-------YEPVQGLWESWDDGSELMRFWHSSSSCVVGDL 273
Query: 289 LYVLDQSSGTR--LMMWQKDKRVWVAVGRLSA----LLTRPPCRLVATGKRIFIIGKG 340
LY LD + ++++ ++ VW V + +LT L ++ I+G G
Sbjct: 274 LYALDLTCALEHPIVVYYPNELVWRPVMGVDTAHLPILTEYTSTLANFDGKLVILGGG 331
>AT1G67480.2 | Symbols: | kelch repeat-containing F-box family
protein | chr1:25277294-25278529 FORWARD
Length = 376
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 118/305 (38%), Gaps = 47/305 (15%)
Query: 24 PLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWIYALC 83
PLI G+PDD+A CLA VPR + VC++WR +V + E+ R + E W+Y L
Sbjct: 38 PLIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVL- 96
Query: 84 RDKFERICCYVLDPDSSRRSWKL-------IQGLPPRCLKRKGIGFEALGKKLLSVRWLW 136
++ W++ + LPP K GF+ + ++ + L
Sbjct: 97 ----------TMNAGGKDNRWEVMDCLGQKLSSLPPMPGPAK-TGFKVV---VVDGKLLV 142
Query: 137 LVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYFACEVLDGRIYA 196
+ G C L+ + VY N + R FAC ++G +Y
Sbjct: 143 IAGCCMINGSLV---------ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYV 193
Query: 197 IGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVED------SIVLDGKIYIRCGASS 250
+GG G S + +DP +W I + + +GK+Y+ G S+
Sbjct: 194 VGGHGVDGESLSSAEVYDPETCTW------TFIESLRRPRWGCFASAFNGKLYVMGGRSN 247
Query: 251 VSSHVYAVL--YEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWQKDKR 308
+ +L Y G+W + + V V L+ +D + ++ ++ +
Sbjct: 248 FTIGNSKLLDVYNTQCGSWHGSKNGLT--MVTAHVEVGKKLFCIDWKNHRKMSVFNAEDE 305
Query: 309 VWVAV 313
W V
Sbjct: 306 TWEVV 310
>AT1G67480.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:25277294-25278529 FORWARD
Length = 376
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 118/305 (38%), Gaps = 47/305 (15%)
Query: 24 PLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWIYALC 83
PLI G+PDD+A CLA VPR + VC++WR +V + E+ R + E W+Y L
Sbjct: 38 PLIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVL- 96
Query: 84 RDKFERICCYVLDPDSSRRSWKL-------IQGLPPRCLKRKGIGFEALGKKLLSVRWLW 136
++ W++ + LPP K GF+ + ++ + L
Sbjct: 97 ----------TMNAGGKDNRWEVMDCLGQKLSSLPPMPGPAK-TGFKVV---VVDGKLLV 142
Query: 137 LVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYFACEVLDGRIYA 196
+ G C L+ + VY N + R FAC ++G +Y
Sbjct: 143 IAGCCMINGSLV---------ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYV 193
Query: 197 IGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVED------SIVLDGKIYIRCGASS 250
+GG G S + +DP +W I + + +GK+Y+ G S+
Sbjct: 194 VGGHGVDGESLSSAEVYDPETCTW------TFIESLRRPRWGCFASAFNGKLYVMGGRSN 247
Query: 251 VSSHVYAVL--YEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWQKDKR 308
+ +L Y G+W + + V V L+ +D + ++ ++ +
Sbjct: 248 FTIGNSKLLDVYNTQCGSWHGSKNGLT--MVTAHVEVGKKLFCIDWKNHRKMSVFNAEDE 305
Query: 309 VWVAV 313
W V
Sbjct: 306 TWEVV 310
>AT2G29780.1 | Symbols: | kelch repeat-containing F-box family
protein | chr2:12718132-12719328 REVERSE
Length = 398
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 139/352 (39%), Gaps = 59/352 (16%)
Query: 20 ESQGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWI 79
E+ P+ IP + +A + R ++ L + + +R ++ + E H R NL+E +
Sbjct: 39 ENHPPIPRQIPQALIRRTVALIKRCHYPSLSLLSKAFRIVISSPELHQTRSSLNLTEPVL 98
Query: 80 YALCRDKFERICCYVLDPDSSRRSWKL----IQGLPPRCLKRKGIGFEALGKKLLSVRWL 135
YAL + + + R+ L I LPP G +G K+ + L
Sbjct: 99 YALIGFPPHSFPNWFILNHNITRNIPLRLSAIGSLPPM---NPGSAVVTIGYKMYVIGGL 155
Query: 136 WLVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYF--ACEVLDGR 193
+ F++ C+ N+ LPT + R + EV++G+
Sbjct: 156 IGPNNPVK--------------TVFVIDCRVHTCNY----LPT-MHRARYRAVAEVINGK 196
Query: 194 IYAIGGLGSKLSDPHSW-DTFDPHKNSWESHSD----GNVIP--DVEDSIVLDGKIYI-- 244
IY IGG + D W + FD W + D + +P S+V+ KIYI
Sbjct: 197 IYVIGGCEKRYDD---WIEVFDVVTGIWSTVPDRSHFMSSLPGGGFVTSVVMQNKIYILD 253
Query: 245 -RCGASSVSSHVYAVLYEPSNGTWQHAD--ADMVSGWRGPAVVVDGTLYVLDQS--SGTR 299
CG ++Y+P +GTW+ + + S W P V++ LY D G+
Sbjct: 254 ATCG----------LVYDPIDGTWESGELGTTLKSYWYKPCCVIEDLLYSFDPYCLQGSP 303
Query: 300 LMMWQKDKRVWVAVG----RLSALLTRPPCRLVATGKRIFIIGKGLSTVVFD 347
+ ++ + VW + R L C++ G ++ + G + V D
Sbjct: 304 INVYDPNVMVWTPMMGTGIRAFPDLDYFECKMANFGGKLMVFGATYNNPVTD 355
>AT2G29770.1 | Symbols: | kelch repeat-containing F-box family
protein | chr2:12715710-12716873 REVERSE
Length = 387
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 182 RCYFACEVLDGRIYAIGGLGSKLSDPHSWDTFDPHKNSWES-----HSDGNVI--PDVED 234
R Y A V+DGRIY IGG + + H + FD W S + +G+ +
Sbjct: 173 RVYAAAGVIDGRIYVIGGCVKR--NDHWIEVFDIENRIWSSVPHHRYCNGSSLRGEGFVT 230
Query: 235 SIVLDGKIYIRCGASSVSSHVYAVLYEPSNGTWQHA--DADMVSGWRGPAVVVDGTLYVL 292
S+V+ KIYI ++ YEP +GT Q + + WR P V++G LY +
Sbjct: 231 SVVMQNKIYIL-------DSLFGFAYEPRHGTLQSLGFETQFMFLWRDPCCVIEGLLYCI 283
Query: 293 DQSS--GTRLMMWQKDKRVWVAVGRLSAL--LTRPPCRLVATGKRIFIIG 338
D G ++++ ++ +W V L C++ G ++ I+G
Sbjct: 284 DPMCVLGHAIVVYDPNELIWRRVKGAYILPKFCYYQCKMANFGGKLAILG 333
>AT2G21950.1 | Symbols: SKIP6 | SKIP6 (SKP1 interacting partner 6);
ubiquitin-protein ligase | chr2:9353526-9354644 REVERSE
Length = 372
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 182 RCYFACEVLDGRIYAIGG-LGSKLSDPHSW-DTFDPHKNSWES-HSDGNVIPD--VEDSI 236
R + A V+DG+IY IGG + + +W + FD +WE S G + + + S
Sbjct: 163 REFAAAGVIDGKIYVIGGCVVDNWARSINWAEMFDIKTQTWEPVASPGMEVREKWMHASA 222
Query: 237 VLDGKIYIRCGASSVSSHVYAVLYEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSS 296
V++GK+Y + V+YEP W+ + + GWRG A V++ LY D
Sbjct: 223 VMEGKVYAMADRN-------GVVYEPKEKKWEMPEKRLDLGWRGRACVIENILYCYDYLG 275
Query: 297 GTRLMMWQKDKRVW 310
R + +R+W
Sbjct: 276 KIR--GYDPKERIW 287
>AT3G63220.2 | Symbols: | kelch repeat-containing F-box family
protein | chr3:23357540-23358598 REVERSE
Length = 352
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 32/210 (15%)
Query: 182 RCYFACEVLDGRIYAIGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVEDS------ 235
R FAC VL G+I GG + + +DP + W S IPD+ +
Sbjct: 157 RAMFACCVLQGKIVVAGGFTTCRKSISGAEMYDPENDVWTS------IPDLHQTHNSACS 210
Query: 236 -IVLDGKIYI-RCGASSVSSHVYAVLYEPSNGTWQHADADMVSGW-RGPAVVVDGTLYVL 292
+V++GK+++ G S+V + E W D GW +GP VVV+ LYV+
Sbjct: 211 GLVVNGKVHVLHKGLSTVQ------VLESVKLGWDVKD----YGWPQGPMVVVEDVLYVM 260
Query: 293 DQSSGTRLMMWQKDKRVWVAVGRLSALLTRPPCRLVATGKRIFIIGK--GLSTVVFDIDK 350
++++++ W V S R + + + I+G G + +DI
Sbjct: 261 SHG-----LVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPDRLNWDIKP 315
Query: 351 TGNMEGVLVSSSIPRINSEDDIISCKCVAL 380
+++ + V + P S + C+ L
Sbjct: 316 LSDVDALTVGNDRPAWRSVAPMTRCRGTIL 345
>AT3G63220.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:23357540-23358577 REVERSE
Length = 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 32/210 (15%)
Query: 182 RCYFACEVLDGRIYAIGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVEDS------ 235
R FAC VL G+I GG + + +DP + W S IPD+ +
Sbjct: 150 RAMFACCVLQGKIVVAGGFTTCRKSISGAEMYDPENDVWTS------IPDLHQTHNSACS 203
Query: 236 -IVLDGKIYI-RCGASSVSSHVYAVLYEPSNGTWQHADADMVSGW-RGPAVVVDGTLYVL 292
+V++GK+++ G S+V + E W D GW +GP VVV+ LYV+
Sbjct: 204 GLVVNGKVHVLHKGLSTVQ------VLESVKLGWDVKD----YGWPQGPMVVVEDVLYVM 253
Query: 293 DQSSGTRLMMWQKDKRVWVAVGRLSALLTRPPCRLVATGKRIFIIGK--GLSTVVFDIDK 350
++++++ W V S R + + + I+G G + +DI
Sbjct: 254 SHG-----LVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPDRLNWDIKP 308
Query: 351 TGNMEGVLVSSSIPRINSEDDIISCKCVAL 380
+++ + V + P S + C+ L
Sbjct: 309 LSDVDALTVGNDRPAWRSVAPMTRCRGTIL 338
>AT3G27910.1 | Symbols: | kelch repeat-containing protein |
chr3:10357232-10358116 REVERSE
Length = 294
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 186 ACEVLDGRIYAIGGLGSKLSDPHSWDTFDPHKNSWESHS---DGNVIPDVEDSIVLDGKI 242
A ++DG+IY IGG S + + FD K +WES S + + S+V++ KI
Sbjct: 88 AFGIVDGKIYVIGGYNKADSLDNWVEVFDLEKQTWESFSGLCNEELSKITLKSVVMNKKI 147
Query: 243 YIRCGASSVSSHVYAVLYEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLM- 301
YI + ++++P G W+ D + W + V+D LY S R+
Sbjct: 148 YIMDRGN-------GIVFDPKKGVWER-DFLLDRDWVVGSCVIDNMLYTFGFDSVKRIYR 199
Query: 302 --MWQKDKRVWVAVGRLSALLTRPPCRLVATGKRIFIIGKGLSTVVFDIDKTGNMEGVLV 359
++ RVW V + + P G R+ G G ++ ++DK G E +
Sbjct: 200 VRVYDPSVRVWSFVKGIEDI----PKMDGTLGSRMANHG-GKLVILLNLDKNGGTELWCI 254
Query: 360 SSSIPRINSEDDI 372
++ R + +I
Sbjct: 255 KIALERRGQQGEI 267