Jatropha Genome Database
- JcCA0140861.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0140861.10 - phase: 0 /pseudo/partial
(140 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G14255.1 | Symbols: | zinc ion binding | chr2:6036974-604089... 179 4e-46
AT5G20350.1 | Symbols: TIP1 | TIP1 (TIP GROWTH DEFECTIVE 1); S-a... 162 8e-41
AT4G24630.1 | Symbols: | receptor/ zinc ion binding | chr4:1271... 84 2e-17
AT3G26935.1 | Symbols: | zinc finger (DHHC type) family protein... 83 5e-17
AT5G41060.2 | Symbols: | zinc finger (DHHC type) family protein... 79 7e-16
AT5G41060.1 | Symbols: | zinc finger (DHHC type) family protein... 79 8e-16
AT3G04970.2 | Symbols: | zinc finger (DHHC type) family protein... 79 8e-16
AT3G04970.1 | Symbols: | zinc finger (DHHC type) family protein... 79 1e-15
AT3G56930.1 | Symbols: | zinc finger (DHHC type) family protein... 77 3e-15
AT3G56920.1 | Symbols: | zinc finger (DHHC type) family protein... 75 1e-14
AT3G48760.1 | Symbols: | zinc finger (DHHC type) family protein... 74 2e-14
AT5G05070.1 | Symbols: | zinc ion binding | chr5:1496896-149844... 71 2e-13
AT5G50020.1 | Symbols: | zinc finger (DHHC type) family protein... 70 6e-13
AT2G40990.1 | Symbols: | zinc ion binding | chr2:17105097-17106... 69 7e-13
AT5G04270.1 | Symbols: | zinc ion binding | chr5:1182896-118471... 63 5e-11
AT3G51390.1 | Symbols: | zinc finger (DHHC type) family protein... 63 7e-11
AT1G69420.1 | Symbols: | zinc finger (DHHC type) family protein... 62 9e-11
AT1G69420.2 | Symbols: | zinc finger (DHHC type) family protein... 62 9e-11
AT3G09320.1 | Symbols: | zinc finger (DHHC type) family protein... 61 2e-10
AT4G00840.1 | Symbols: | zinc ion binding | chr4:355483-357105 ... 61 2e-10
AT4G01730.1 | Symbols: | zinc ion binding | chr4:749574-752034 ... 60 3e-10
AT4G15080.1 | Symbols: | zinc finger (DHHC type) family protein... 59 7e-10
AT4G22750.2 | Symbols: | zinc finger (DHHC type) family protein... 57 3e-09
AT4G22750.1 | Symbols: | zinc finger (DHHC type) family protein... 57 3e-09
AT3G60800.1 | Symbols: | zinc finger (DHHC type) family protein... 56 9e-09
AT3G18620.1 | Symbols: | zinc finger (DHHC type) family protein... 55 2e-08
AT2G33640.1 | Symbols: | zinc finger (DHHC type) family protein... 55 2e-08
AT3G22180.1 | Symbols: | zinc finger (DHHC type) family protein... 52 8e-08
>AT2G14255.1 | Symbols: | zinc ion binding | chr2:6036974-6040892
FORWARD
Length = 536
Score = 179 bits (454), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
Query: 10 TVFLAPNLPKVTAVVGLWGFTALSLAVVSLIMFYRCSSRDPGFIKRLEDLGKDADIEDPL 69
++ A NLPK+TA+VGLW LS V +LI FYR S +DPG++KR + DPL
Sbjct: 288 SIVSASNLPKITAMVGLWACFGLSCGVYALITFYRVSRKDPGYVKRTGEANSQHTANDPL 347
Query: 70 LNIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKR 129
++I+ S W GNWSQLCPTCKIIRPVRSKHC TCKRCVEQFDHHCPWISNCVGK+NKR
Sbjct: 348 IDINFKNPS-WKGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKKNKR 406
Query: 130 DFFIFLCLGTL 140
F +F+ +G L
Sbjct: 407 YFLVFVIMGAL 417
>AT5G20350.1 | Symbols: TIP1 | TIP1 (TIP GROWTH DEFECTIVE 1);
S-acyltransferase/ acyl binding | chr5:6876772-6881102
FORWARD
Length = 620
Score = 162 bits (409), Expect = 8e-41, Method: Composition-based stats.
Identities = 70/123 (56%), Positives = 90/123 (73%), Gaps = 2/123 (1%)
Query: 7 YSFTVFLAPNLPKVTAVVGLWGFTALSLAVVSLIMFYRCSSRDPGFIK-RLEDLGKDADI 65
Y+ +V LA NLPK+T +G + LA L +FYRCS +DPG+I+ + D D
Sbjct: 292 YTNSVVLASNLPKLTTGIGALAWLGFILATAGLFLFYRCSRKDPGYIRMNIHDPQTMKD- 350
Query: 66 EDPLLNIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGK 125
++PLL I+LN ++ GNW+QLC TCKIIRP+R+KHCSTC RCVEQFDHHCPW+SNCVGK
Sbjct: 351 DEPLLKIELNNPALLAGNWTQLCATCKIIRPLRAKHCSTCDRCVEQFDHHCPWVSNCVGK 410
Query: 126 RNK 128
+NK
Sbjct: 411 KNK 413
>AT4G24630.1 | Symbols: | receptor/ zinc ion binding |
chr4:12714919-12717111 FORWARD
Length = 407
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 31 ALSLAVVSLIMFYRCSSRDPGFIKR-----LEDLGKDADI-----EDPLLNIDLNYSSIW 80
A+ + LI+ + S+RDPG + R EDL + + + P + I I
Sbjct: 69 AILFTIYVLILLFFTSARDPGIVPRNSHPPEEDLRYETTVSADGRQTPSVQIPRTKEVIV 128
Query: 81 MGNWSQL--CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLG 138
G ++ C TC + RP R HCS C CVE+FDHHCPW+ C+G RN R FF+F+
Sbjct: 129 NGVSVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSS 188
Query: 139 TL 140
TL
Sbjct: 189 TL 190
>AT3G26935.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:9933001-9935218 REVERSE
Length = 443
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 23/133 (17%)
Query: 27 WGFTALSLAVV----SLIMFYRCSSRDPGFIKR------LEDLGKDADI---EDPLL--- 70
WG + +++AVV LI+ S RDPG I R E L + D + P L
Sbjct: 75 WGVSIVAVAVVFTIYDLILLLLTSGRDPGIIPRNAHPPEPETLDGNMDAGAGQTPQLRLP 134
Query: 71 ---NIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRN 127
+ LN + + + C TC + RP R HCS C CVE+FDHHCPW+ C+G RN
Sbjct: 135 RIKEVQLNGITFKV----KYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGMRN 190
Query: 128 KRDFFIFLCLGTL 140
R FF+F+ TL
Sbjct: 191 YRFFFMFVFSTTL 203
>AT5G41060.2 | Symbols: | zinc finger (DHHC type) family protein |
chr5:16435949-16437540 FORWARD
Length = 395
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 21/131 (16%)
Query: 27 WGFTALSLAVV----SLIMFYRCSSRDPGFIKR---------LEDLGKDADIEDPLL--- 70
WG + + +AVV LI+ S RDPG I R ++ + P L
Sbjct: 60 WGVSIILVAVVFTIYDLILLMLTSGRDPGIIPRNSHPPEPEVVDGNTGSGTSQTPRLPRV 119
Query: 71 -NIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKR 129
+++N + + C TC + RP R HCS C CVE+FDHHCPW+ C+ +RN R
Sbjct: 120 KEVEVNGKVFKV----KYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIAQRNYR 175
Query: 130 DFFIFLCLGTL 140
FF+F+ TL
Sbjct: 176 FFFMFVFSTTL 186
>AT5G41060.1 | Symbols: | zinc finger (DHHC type) family protein |
chr5:16435602-16437540 FORWARD
Length = 410
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 21/131 (16%)
Query: 27 WGFTALSLAVV----SLIMFYRCSSRDPGFIKR---------LEDLGKDADIEDPLL--- 70
WG + + +AVV LI+ S RDPG I R ++ + P L
Sbjct: 75 WGVSIILVAVVFTIYDLILLMLTSGRDPGIIPRNSHPPEPEVVDGNTGSGTSQTPRLPRV 134
Query: 71 -NIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKR 129
+++N + + C TC + RP R HCS C CVE+FDHHCPW+ C+ +RN R
Sbjct: 135 KEVEVNGKVFKV----KYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIAQRNYR 190
Query: 130 DFFIFLCLGTL 140
FF+F+ TL
Sbjct: 191 FFFMFVFSTTL 201
>AT3G04970.2 | Symbols: | zinc finger (DHHC type) family protein |
chr3:1376240-1378010 FORWARD
Length = 316
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 15/109 (13%)
Query: 29 FTALSLAVVSLIMFYRCSSRDPGFIKRLEDLGK--DADIEDPLLNIDLNYSSIWMGNWSQ 86
+T+ +V +I+F DPG + E++ + A D D+ YS +
Sbjct: 114 YTSFLAVIVGVILFLLTCFSDPGTVNA-ENVSRYISAYPYD-----DIIYSK-------K 160
Query: 87 LCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFL 135
C TCKI +P RSKHCS C RCV +FDHHC W++NC+G+RN + F FL
Sbjct: 161 ECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTKYFMAFL 209
>AT3G04970.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:1376240-1378339 FORWARD
Length = 397
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 15/109 (13%)
Query: 29 FTALSLAVVSLIMFYRCSSRDPGFIKRLEDLGK--DADIEDPLLNIDLNYSSIWMGNWSQ 86
+T+ +V +I+F DPG + E++ + A D D+ YS +
Sbjct: 114 YTSFLAVIVGVILFLLTCFSDPGTVNA-ENVSRYISAYPYD-----DIIYSK-------K 160
Query: 87 LCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFL 135
C TCKI +P RSKHCS C RCV +FDHHC W++NC+G+RN + F FL
Sbjct: 161 ECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTKYFMAFL 209
>AT3G56930.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:21073805-21075873 FORWARD
Length = 477
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 23/125 (18%)
Query: 34 LAVVSLIMFYRCSSRDPGFIKR------LEDL------------GKDADIEDPLL-NIDL 74
L ++ + SSRDPG + R +D G+ +I P + ++ +
Sbjct: 79 LTILDIFFLLMTSSRDPGIVPRSFRPPETDDAPDSTTPSMEWVSGRTPNIRIPRVKDVTV 138
Query: 75 NYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIF 134
N ++ + + C TC + RP R+ HCS C CV++FDHHCPW+ C+G RN R FF+F
Sbjct: 139 NGHTVKV----KFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIGVRNYRFFFMF 194
Query: 135 LCLGT 139
+ T
Sbjct: 195 ISTST 199
>AT3G56920.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:21070834-21072441 FORWARD
Length = 338
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 31 ALSLAVVSLIMFYRCSSRDPGFIKRLEDLGKDADIED-----------PLLNIDLNYSSI 79
A+ L ++ + SSRDPG I R + + +A+I D L ++ L +
Sbjct: 73 AILLTFMAFTFLFLTSSRDPGIIPRNKQVS-EAEIPDVTTQSTEWVTSKLGSVKLPRTKD 131
Query: 80 WMGNW----SQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFL 135
M N + C TC++ RP R+ HCS C CV++FDHHCPW+ C+ RN F FL
Sbjct: 132 VMVNGFTVKVKFCDTCQLYRPPRAFHCSICNNCVQRFDHHCPWVGQCIALRNYPFFVCFL 191
Query: 136 CLGTL 140
TL
Sbjct: 192 SCSTL 196
>AT3G48760.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:18075902-18078084 FORWARD
Length = 476
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 46 SSRDPGFIKRL---------EDLGKDADIEDPLLNIDLNYSSIWMGNWSQL--CPTCKII 94
S+RDPG I R E G+ P + I G ++ C TC +
Sbjct: 107 SARDPGIIPRNLYPPEPESNEGNGEPRLAHTPQSRLPRTKDMIVNGITVKIKYCDTCMLY 166
Query: 95 RPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTL 140
RP R+ HCS C CVE+FDHHCPW+ C+G RN R +F+F+ TL
Sbjct: 167 RPPRASHCSICNNCVEKFDHHCPWLGQCIGLRNYRFYFMFVLCSTL 212
>AT5G05070.1 | Symbols: | zinc ion binding | chr5:1496896-1498441
FORWARD
Length = 413
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 24/127 (18%)
Query: 34 LAVVSLIMFYRCSSRDPGFIKRLEDLGKDADIEDPLLNIDLNYSSIWMGNWS-------- 85
L ++ S+RDPG I R K + I + + L S W+ N +
Sbjct: 103 LTLLDFTFLMLTSARDPGIIPR----NKTSMILEDDSDSSLTQSMEWVNNKTPNLKIPRT 158
Query: 86 ------------QLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFI 133
+ C TC + RP R+ HCS C CV++FDHHCPW+ C+ +RN F
Sbjct: 159 KDVFVNGYTIKVKFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIARRNYPFFIC 218
Query: 134 FLCLGTL 140
F+ TL
Sbjct: 219 FISSSTL 225
>AT5G50020.1 | Symbols: | zinc finger (DHHC type) family protein |
chr5:20351591-20354124 FORWARD
Length = 407
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 70/149 (46%), Gaps = 26/149 (17%)
Query: 9 FTVFLAPNL-----PKVTAVVGLWGFTALSLAVVSLIMFYRCSSRDPGFIKR-----LED 58
F+VF+A +L P V L + V LI+ + S+RDPG + R E+
Sbjct: 44 FSVFVATHLRRELLPNNAGHVFL--VAGVLFTVFVLILLFLTSARDPGIVPRNSHPPEEE 101
Query: 59 LGKDADI-----EDPLLNIDLNYSSIWMGNWSQL--CPTCKIIRPVRSKHCSTCKRCVEQ 111
L D + + P + I + G ++ C TC + RP R HCS C CVE+
Sbjct: 102 LCYDTTVSSDGRQTPTVQIPRTKEVMVYGVSVRVKYCDTCMLYRPPRCSHCSICNNCVER 161
Query: 112 FDHHCPWISNCVGKRNKRDFFIFLCLGTL 140
FDHHCPW RN R FF+F+ T+
Sbjct: 162 FDHHCPW-------RNYRYFFMFVSSATI 183
>AT2G40990.1 | Symbols: | zinc ion binding | chr2:17105097-17106773
REVERSE
Length = 411
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 53/115 (46%), Gaps = 26/115 (22%)
Query: 46 SSRDPGFIKRLEDLGKDADIEDPLLNIDLNYSSIWMGNW--------------------S 85
SSRDPG I R K+A + L I SS W+ N
Sbjct: 106 SSRDPGIIPR----NKEAPEAEGLDMI--TQSSEWVNNKLGNTKIPRTKDILVNGYTVKV 159
Query: 86 QLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTL 140
+ C TC + RP R+ HCS C CV++FDHHCPW+ C+ RN F F+ TL
Sbjct: 160 KFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIALRNYPYFICFISTSTL 214
>AT5G04270.1 | Symbols: | zinc ion binding | chr5:1182896-1184718
REVERSE
Length = 254
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 85 SQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTL 140
++ C C +P+R+ HC C+RCV + DHHC WI+NCVG N + FFI + T+
Sbjct: 74 TRKCDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGYANYKAFFILVFYATV 129
>AT3G51390.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:19075718-19077966 FORWARD
Length = 340
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 88 CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGT 139
C C + +P R+KHC C RCV QFDHHC W+ C+G++N F+ ++C T
Sbjct: 164 CGYCHVEQPPRTKHCHDCDRCVLQFDHHCVWLGTCIGQKNHSKFWWYICEET 215
>AT1G69420.1 | Symbols: | zinc finger (DHHC type) family protein |
chr1:26093690-26096736 FORWARD
Length = 596
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 88 CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFL 135
C C++ SKHC C +CV++FDHHC W++NC+GKRN R FF +
Sbjct: 165 CSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFSLM 212
>AT1G69420.2 | Symbols: | zinc finger (DHHC type) family protein |
chr1:26093690-26096736 FORWARD
Length = 596
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 88 CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFL 135
C C++ SKHC C +CV++FDHHC W++NC+GKRN R FF +
Sbjct: 165 CSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFSLM 212
>AT3G09320.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:2862142-2864113 REVERSE
Length = 286
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 48 RDPGFIKRLEDLGKDADIEDPLLNIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKR 107
RDPG + L D+EDP + + G + C C +P R+ HC CKR
Sbjct: 66 RDPGRVP----LNYMPDVEDPESPV---HEIKRKGGDLRYCQKCSHFKPPRAHHCRVCKR 118
Query: 108 CVEQFDHHCPWISNCVGKRNKR 129
CV + DHHC WI+NCVG N +
Sbjct: 119 CVLRMDHHCIWINNCVGHTNYK 140
>AT4G00840.1 | Symbols: | zinc ion binding | chr4:355483-357105
REVERSE
Length = 291
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 88 CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKR 129
C C+ ++P R HCS C+RCV + DHHC WI NCVG RN +
Sbjct: 113 CTKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYK 154
>AT4G01730.1 | Symbols: | zinc ion binding | chr4:749574-752034
FORWARD
Length = 508
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 62 DADIEDPLLNIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISN 121
D+ DP D++Y C C + SKHC TC RCVE FDHHC W++N
Sbjct: 145 DSVTPDPKEEDDISY-----------CSLCDLEVKRSSKHCRTCNRCVEGFDHHCRWLNN 193
Query: 122 CVGKRNKRDF 131
CVGK+N F
Sbjct: 194 CVGKKNYTTF 203
>AT4G15080.1 | Symbols: | zinc finger (DHHC type) family protein |
chr4:8609085-8612229 REVERSE
Length = 718
Score = 59.3 bits (142), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 87 LCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTL 140
C C SKHC +C +CV+ FDHHC W++NCVG++N F + + L
Sbjct: 175 FCTLCNAEVRKFSKHCRSCDKCVDCFDHHCRWLNNCVGRKNYMTFISLMAVSLL 228
>AT4G22750.2 | Symbols: | zinc finger (DHHC type) family protein |
chr4:11949366-11951335 REVERSE
Length = 324
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 86 QLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRD 130
+ C C +P RS HCS C RC+ + DHHC W+ NCVG N +
Sbjct: 138 RYCRKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKS 182
>AT4G22750.1 | Symbols: | zinc finger (DHHC type) family protein |
chr4:11949366-11951335 REVERSE
Length = 302
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 86 QLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKR 129
+ C C +P RS HCS C RC+ + DHHC W+ NCVG N +
Sbjct: 116 RYCRKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYK 159
>AT3G60800.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:22467486-22469273 REVERSE
Length = 307
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 67 DPLLNID---LNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCV 123
DPL ++D L S + C C ++P R HCS C RCV + DHHC W+ NCV
Sbjct: 105 DPLNSLDFVGLQSDSSSSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCV 164
Query: 124 GKRNKR 129
G N +
Sbjct: 165 GALNYK 170
>AT3G18620.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:6408849-6410716 FORWARD
Length = 345
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 22/126 (17%)
Query: 15 PNLPKVTAVVGLW-GFTALSLAVVSLIMF----YRCSSRDPGFIKRLEDLGKDADIEDPL 69
P L ++ G++ T +LA+ +L F ++C+ + + G + +
Sbjct: 89 PVLFSISLACGIFHSVTTATLAISTLSTFILVAFKCAGKPTNIL-----YGTHPGVGNGA 143
Query: 70 LNIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKR 129
LN NY+ C C + R+ HC TC CV DHHCP+I NCVG N +
Sbjct: 144 LN---NYT---------FCNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHK 191
Query: 130 DFFIFL 135
F FL
Sbjct: 192 YFIAFL 197
>AT2G33640.1 | Symbols: | zinc finger (DHHC type) family protein |
chr2:14239500-14242240 FORWARD
Length = 565
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 87 LCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCL 137
C C + SKHC +C +CV+ FDHHC W++NCVG++N + F+CL
Sbjct: 145 FCSLCNAEVRMFSKHCRSCGKCVDGFDHHCRWLNNCVGQKN---YISFVCL 192
>AT3G22180.1 | Symbols: | zinc finger (DHHC type) family protein |
chr3:7827190-7830508 FORWARD
Length = 706
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 99 SKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTL 140
SKHC +C +CV+ FDHHC W++NCVG++N F + L
Sbjct: 185 SKHCRSCDKCVDCFDHHCKWLNNCVGRKNYVTFVSLMSASLL 226