Jatropha Genome Database

JcCA0140751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0140751.20 - phase: 2 /TE/partial
         (212 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   122   2e-28
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...    88   3e-18
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    55   2e-08

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 86/161 (53%)

Query: 1   DIFYAVGVMSRYMQNPKKHHLEVVRRILRYVKSTIDYGLLYKKGKDCKLVGYCDADYAGD 60
           DI +AV  +S++ + P+  H + V +IL Y+K T+  GL Y    + +L  + DA +   
Sbjct: 394 DISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSC 453

Query: 61  HDTRRSTTRYLFKLGSGTISWCSKRQPTVSLSTTXXXXXXXXXXXXXSTWLIQLMNDLHQ 120
            DTRRST  Y   LG+  ISW SK+Q  VS S+                WL Q   +L  
Sbjct: 454 KDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL 513

Query: 121 PVDYAVPLYCDNQSAIRLAENPVFHARTKHVEVHYHFVREK 161
           P+     L+CDN +AI +A N VFH RTKH+E   H VRE+
Sbjct: 514 PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 61/110 (55%)

Query: 1   DIFYAVGVMSRYMQNPKKHHLEVVRRILRYVKSTIDYGLLYKKGKDCKLVGYCDADYAGD 60
           DI YAV ++ + M  P     ++++R+LRYVK TI +GL   K     +  +CD+D+AG 
Sbjct: 116 DISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGC 175

Query: 61  HDTRRSTTRYLFKLGSGTISWCSKRQPTVSLSTTXXXXXXXXXXXXXSTW 110
             TRRSTT +   LG   ISW +KRQPTVS S+T              TW
Sbjct: 176 TSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
          chrM:68918-69253 REVERSE
          Length = 111

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 40/70 (57%)

Query: 1  DIFYAVGVMSRYMQNPKKHHLEVVRRILRYVKSTIDYGLLYKKGKDCKLVGYCDADYAGD 60
          D+ +AV  +S++    +   ++ V ++L YVK T+  GL Y    D +L  + D+D+A  
Sbjct: 9  DLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASC 68

Query: 61 HDTRRSTTRY 70
           DTRRS T +
Sbjct: 69 PDTRRSVTGF 78