Jatropha Genome Database
- JcCA0140011.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0140011.20 - phase: 0
(345 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10955.1 | Symbols: | lipase class 3 family protein | chr4:6... 489 e-138
AT2G05260.1 | Symbols: | lipase class 3 family protein | chr2:1... 432 e-121
AT5G24230.1 | Symbols: | LOCATED IN: cellular_component unknown... 363 e-100
AT2G05260.2 | Symbols: | lipase class 3 family protein | chr2:1... 357 5e-99
AT5G24220.1 | Symbols: | lipase class 3-related | chr5:8225861-... 298 5e-81
AT5G24180.1 | Symbols: | lipase class 3-related | chr5:8195600-... 297 5e-81
AT5G24200.1 | Symbols: | triacylglycerol lipase | chr5:8203348-... 254 5e-68
AT5G24210.1 | Symbols: | lipase class 3 family protein | chr5:8... 213 2e-55
AT5G24190.1 | Symbols: | LOCATED IN: cellular_component unknown... 161 7e-40
AT5G50890.1 | Symbols: | LOCATED IN: cellular_component unknown... 157 7e-39
>AT4G10955.1 | Symbols: | lipase class 3 family protein |
chr4:6713778-6715372 REVERSE
Length = 350
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/353 (65%), Positives = 291/353 (82%), Gaps = 12/353 (3%)
Query: 1 MASEREDFSLSGPLHLTVVDWTDAHHRRSVAASLVQGVYILERDRQLKRQGPE-ALANPW 59
M SER+DFSL+GPLHLT +DW + HHRRSVA SLVQG+Y+ ERDRQL+R+GPE AL+ W
Sbjct: 2 MISERDDFSLTGPLHLTSIDWANEHHRRSVAGSLVQGIYVAERDRQLQREGPELALSPIW 61
Query: 60 WEFFHFRLLRKLVDDVDSSIFGAIYEFKPP--ISCSNHSLDKSPRYVIAFRGTVTKPDSF 117
EFFHFRL+RK VDD D+SIFG IYE+K P +S + S++ SPR+VIAFRGTVTK DS
Sbjct: 62 SEFFHFRLIRKFVDDADNSIFGGIYEYKLPQQLSQTVKSMEFSPRFVIAFRGTVTKVDSI 121
Query: 118 SRDLELDIHIIRNGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKTMA 177
SRD+E DIH+IRNGLH T+RFEI IQA+RN+VA+VG S+VWLAGHSLGA+MA+L GKT+A
Sbjct: 122 SRDIEHDIHVIRNGLHTTTRFEIAIQAVRNIVASVGGSSVWLAGHSLGASMALLTGKTIA 181
Query: 178 KTGVLIQAFLFNSPFLSAPIERIKDKRVKHGLRIAGSVITAGLAFAATVKKN-NQNSRSV 236
+TG + F FN PFLSAPIE+IKDKR+KHG+RIAGSVITAGLA A ++ +QN R++
Sbjct: 182 RTGFFPECFAFNPPFLSAPIEKIKDKRIKHGIRIAGSVITAGLALAKKATQHYSQNDRAL 241
Query: 237 ----DPFSALSAWIPSIFVNPGDHICSEYIGYFEHRKKMDDIGIGAIERLATQNSIGGLI 292
DPF ALS W P ++VNPGDH+CSEY+GYFEHR KM++IGIG +ER+ATQ+S+GG++
Sbjct: 242 PAPPDPFEALSDWFPRLYVNPGDHLCSEYVGYFEHRNKMEEIGIGFVERVATQHSLGGML 301
Query: 293 MGAIGKESEPLHLIPSAILTTNLTPSRDFKEAHGIHQWWRPDLDVQSKLYRYQ 345
+G EP+HLIPS++LT NL+ SRDFK+AHGIHQWWR D ++K+Y+Y+
Sbjct: 302 LGG----QEPVHLIPSSVLTVNLSSSRDFKQAHGIHQWWREDNKFETKVYQYK 350
>AT2G05260.1 | Symbols: | lipase class 3 family protein |
chr2:1918730-1919893 FORWARD
Length = 358
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/361 (59%), Positives = 274/361 (75%), Gaps = 19/361 (5%)
Query: 1 MASEREDFSLSGPLHLTVVDWTDAHHRRSVAASLVQGVYILERDRQLKRQGPEALANPWW 60
MAS+RE+F+L GP HLT VDW + H+R VAA LVQG+YI+E+DRQLKR+G EALA+PWW
Sbjct: 1 MASDREEFNLCGPTHLTTVDWGNEDHQRCVAACLVQGIYIVEQDRQLKREGTEALASPWW 60
Query: 61 EFFHFRLLRKLVDDVDSSIFGAIYEFKPPISCSNHSLDKS-PRYVIAFRGTVTKPDSFSR 119
E F+F+L+R L DD D SIFG I+E+K S +D PRYVIAFRGT+TK DS +R
Sbjct: 61 ESFNFKLIRHLKDDADFSIFGGIFEYK---SLQPDVVDSGVPRYVIAFRGTLTKADSITR 117
Query: 120 DLELDIHIIRNGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKTMAKT 179
D+ELDIHIIRNGLH TSRFEI +QA+R++ +VG S+ WL GHSLGAAMA+LAGKTM K+
Sbjct: 118 DIELDIHIIRNGLHRTSRFEIAMQAVRSMADSVGASSFWLTGHSLGAAMALLAGKTMGKS 177
Query: 180 GVLIQAFLFNSPFLSAPIERIKDKRVKHGLRIAGSVITAGLAFAATVKKNNQNSRSV--- 236
GV I++ LFN P++S PIERI ++RV+HG+R AGS+ITAGLA + T+K+ Q +
Sbjct: 178 GVYIKSLLFNPPYVSPPIERIANERVRHGIRFAGSLITAGLALSRTLKQTQQPQQQQLQL 237
Query: 237 -----DPFSALSAWIPSIFVNPGDHICSEYIGYFEHRKKMDDIGIGA--IERLATQNSIG 289
DP ALS+W+P+I VNPGDH+CSEYIG+FEHR M+ IG GA +ER+A Q+S+G
Sbjct: 238 QNLTEDPLEALSSWLPNIHVNPGDHLCSEYIGFFEHRGNMEQIGYGAGIVERMAMQHSLG 297
Query: 290 GLIMGAIG-----KESEPLHLIPSAILTTNLTPSRDFKEAHGIHQWWRPDLDVQSKLYRY 344
GL+M A+G + EP+H+IPSA L N T S D+K+AHGIHQWWR D D+ S +Y Y
Sbjct: 298 GLLMDAMGVSNAVEVEEPVHVIPSANLIVNKTISEDYKDAHGIHQWWRDDQDLVSHIYMY 357
Query: 345 Q 345
+
Sbjct: 358 K 358
>AT5G24230.1 | Symbols: | LOCATED IN: cellular_component unknown;
EXPRESSED IN: root; BEST Arabidopsis thaliana protein
match is: triacylglycerol lipase (TAIR:AT5G24200.1); Has
125 Blast hits to 125 proteins in 14 species: Archae -
0; Bacteria - 0; Metazoa - 3; Fungi - 7; Plants - 115;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:8229182-8230841 FORWARD
Length = 369
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/355 (51%), Positives = 250/355 (70%), Gaps = 11/355 (3%)
Query: 1 MASEREDFSLSGPLHLTVVDWTDAHHRRSVAASLVQGVYILERDRQLKRQGPEALANPWW 60
MAS+RE FS+SGP+HLT +DW +++HR SVA+ LVQ VY LERDRQ R G ++ AN WW
Sbjct: 15 MASQREIFSISGPIHLTSIDWNNSYHRTSVASCLVQAVYTLERDRQQNRIGLKSQANHWW 74
Query: 61 EFFHFRLLRKLVDDVDSSIFGAIYEFKPPISCSNHSLDKS---PRYVIAFRGTVTKPDSF 117
EFF+F L L+DD D SI+GA++E+K S + H S PR+VIAFRGT+ KP S
Sbjct: 75 EFFNFTLAETLIDDSDGSIYGAVFEYKHFFSYNYHHTPHSKPPPRHVIAFRGTILKPHSR 134
Query: 118 SRDLELDIHIIRNGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKTMA 177
SRDL+LD+ IR+ LH+++RF IQ I++ VA G + VWLAGHSLGAA+A+LAGK M
Sbjct: 135 SRDLKLDLRCIRDSLHDSTRFVHAIQVIQSAVAKTGNAAVWLAGHSLGAAVALLAGKIMT 194
Query: 178 KTGVLIQAFLFNSPFLSAPIER-IKDKRVKHGLRIAGSVITAGLAFAATVKKNNQNSRSV 236
++G ++++LFN PF S PIE+ +K +++KHG+R AGS++ AG+A A + +N+
Sbjct: 195 RSGFPLESYLFNPPFSSIPIEKLVKSEKLKHGVRFAGSLVKAGVAIAVKGRHHNKGQED- 253
Query: 237 DPFSALSAWIPSIFVNPGDHICSEYIGYFEHRKKMDDIGIGAIERLATQN------SIGG 290
D F L++WIP +++NP D ICSEYIGYF+HR KM +IG G IER+AT+N S GG
Sbjct: 254 DSFMKLASWIPYLYLNPLDTICSEYIGYFKHRNKMFEIGAGKIERIATRNSLRSLLSGGG 313
Query: 291 LIMGAIGKESEPLHLIPSAILTTNLTPSRDFKEAHGIHQWWRPDLDVQSKLYRYQ 345
+ SEPLHL+PSA +T N + S +FK AHGIHQWW P + + L+++
Sbjct: 314 GGGSSSDSSSEPLHLLPSAYMTINASKSPNFKRAHGIHQWWDPMFNGEYVLHQFN 368
>AT2G05260.2 | Symbols: | lipase class 3 family protein |
chr2:1918730-1919792 FORWARD
Length = 294
Score = 357 bits (917), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 175/287 (60%), Positives = 222/287 (77%), Gaps = 12/287 (4%)
Query: 1 MASEREDFSLSGPLHLTVVDWTDAHHRRSVAASLVQGVYILERDRQLKRQGPEALANPWW 60
MAS+RE+F+L GP HLT VDW + H+R VAA LVQG+YI+E+DRQLKR+G EALA+PWW
Sbjct: 1 MASDREEFNLCGPTHLTTVDWGNEDHQRCVAACLVQGIYIVEQDRQLKREGTEALASPWW 60
Query: 61 EFFHFRLLRKLVDDVDSSIFGAIYEFKPPISCSNHSLDKS-PRYVIAFRGTVTKPDSFSR 119
E F+F+L+R L DD D SIFG I+E+K S +D PRYVIAFRGT+TK DS +R
Sbjct: 61 ESFNFKLIRHLKDDADFSIFGGIFEYK---SLQPDVVDSGVPRYVIAFRGTLTKADSITR 117
Query: 120 DLELDIHIIRNGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKTMAKT 179
D+ELDIHIIRNGLH TSRFEI +QA+R++ +VG S+ WL GHSLGAAMA+LAGKTM K+
Sbjct: 118 DIELDIHIIRNGLHRTSRFEIAMQAVRSMADSVGASSFWLTGHSLGAAMALLAGKTMGKS 177
Query: 180 GVLIQAFLFNSPFLSAPIERIKDKRVKHGLRIAGSVITAGLAFAATVKKNNQNSRSV--- 236
GV I++ LFN P++S PIERI ++RV+HG+R AGS+ITAGLA + T+K+ Q +
Sbjct: 178 GVYIKSLLFNPPYVSPPIERIANERVRHGIRFAGSLITAGLALSRTLKQTQQPQQQQLQL 237
Query: 237 -----DPFSALSAWIPSIFVNPGDHICSEYIGYFEHRKKMDDIGIGA 278
DP ALS+W+P+I VNPGDH+CSEYIG+FEHR M+ IG G+
Sbjct: 238 QNLTEDPLEALSSWLPNIHVNPGDHLCSEYIGFFEHRGNMEQIGYGS 284
>AT5G24220.1 | Symbols: | lipase class 3-related |
chr5:8225861-8227551 FORWARD
Length = 376
Score = 298 bits (762), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 216/337 (64%), Gaps = 11/337 (3%)
Query: 3 SEREDFSLSGPLHLTVVDWTDAHHRRSVAASLVQGVYILERDRQLKRQGPEALANPWWEF 62
S+R+ FS+ GP HLT +DWT+++HR SVA+SLV GVY +ERD+Q KR G E+ A PWW+F
Sbjct: 20 SDRDVFSIFGPFHLTSIDWTNSYHRTSVASSLVNGVYTMERDKQEKRVGSESRAMPWWDF 79
Query: 63 FHFRLLRKLVDDVDSSIFGAIYEFKPPISCSNHSLDKS-PRYVIAFRGTVTKPDSFSRDL 121
F+F L+ L+DD DSSI+GA++E+K C N S K+ PRYVIAFRGT+ + D++ D+
Sbjct: 80 FNFSLVETLIDDYDSSIYGAVFEYKLSNLCQNTSHAKAPPRYVIAFRGTILESDTWMTDV 139
Query: 122 ELDIHIIRNGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKTMAKTGV 181
+ ++ N LHE R I+AIR++V E+ +WLAGHSLGAA+ +LAGKTM G
Sbjct: 140 KHNLKFSFNTLHEGGRSLQAIRAIRSMVDKHSEAAIWLAGHSLGAALVLLAGKTMTSFGF 199
Query: 182 LIQAFLFNSPFLSAPIERIK-DKRVKHGLRIAGSVITAGLAFAATVKKNNQNSRSVDPFS 240
L+++++FN P P+E++ K++K + +V+ A +A T + ++ DP +
Sbjct: 200 LLESYIFNPPISCIPLEQLPGGKKIKGVFQFTKTVVKATVAMVLTDLQVQED----DPKT 255
Query: 241 ALSAWIPSIFVNPGDHICSEYIGYFEHRKKMDDIGIGAIERLATQNSIGGLIMGAIGK-- 298
A +WIP ++VNP D IC+ YI YF H+ M +IG IER+ S+ L+MG
Sbjct: 256 A--SWIPYLYVNPADPICAGYIDYFRHKTFMSEIGASHIERIGAGKSVRSLLMGKSSSSD 313
Query: 299 -ESEPLHLIPSAILTTNLTPSRDFKEAHGIHQWWRPD 334
+EPLHL+PSA + N AHG+HQWW D
Sbjct: 314 LSTEPLHLLPSADMIVNKNKPTKVMTAHGLHQWWERD 350
>AT5G24180.1 | Symbols: | lipase class 3-related |
chr5:8195600-8197119 FORWARD
Length = 375
Score = 297 bits (761), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 214/340 (62%), Gaps = 14/340 (4%)
Query: 2 ASEREDFSLSGPLHLTVVDWTDAHHRRSVAASLVQGVYILERDRQLKRQGPEALANPWWE 61
+ + + F++ GP HLT +DW + +HR SVA+SLV GVY LE DR +R+G EALA PWWE
Sbjct: 17 SKDTDTFNIFGPFHLTSIDWNNQYHRTSVASSLVNGVYTLEGDRLEEREGSEALAKPWWE 76
Query: 62 FFHFRLLRKLVDDVDSSIFGAIYEFKPPISCSNHSLDKSPRYVIAFRGTVTKPDSFSRDL 121
FFHF LL L+DD DSSI+GAI+E++ N K PRYVIAFRGTV K ++ DL
Sbjct: 77 FFHFTLLETLIDD-DSSIYGAIFEYELYHLYQNTPHVKVPRYVIAFRGTVLKGKTWKFDL 135
Query: 122 ELDIHIIRNGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKTMAKTGV 181
+LD+ I N LH+ R I IR +V S +WLAGHSLGAA+ +LAGKTM +G
Sbjct: 136 KLDLKCIFNTLHQGGRSMYAINVIRRMVDKHNHSAIWLAGHSLGAALVLLAGKTMKISGF 195
Query: 182 LIQAFLFNSPFLSAPIERIKDKRVKHGL-RIAGSVITAGLAFAATVKKNNQNSRSVDPFS 240
L+++++FN P S P+E++ + GL +I SV+ A +A A T + ++ DP +
Sbjct: 196 LLESYIFNPPISSIPLEQLPGGDIIKGLFQITKSVVKATVAMALTDLQVPKD----DPKT 251
Query: 241 ALSAWIPSIFVNPGDHICSEYIGYFEHRKKMDDIGIGAIERLATQNSIGGLIMGAIGK-- 298
A +WIP ++VNP D IC+ YI YF H+ M +IG IER+ + S+ L++G GK
Sbjct: 252 A--SWIPYLYVNPADPICAGYIDYFRHKTFMSEIGASHIERIGARKSVRSLLVGRRGKLS 309
Query: 299 ----ESEPLHLIPSAILTTNLTPSRDFKEAHGIHQWWRPD 334
SEPLHL+PSA +T N AHG+HQWW D
Sbjct: 310 PSDLSSEPLHLLPSADMTVNKNKPTKSTTAHGLHQWWERD 349
>AT5G24200.1 | Symbols: | triacylglycerol lipase |
chr5:8203348-8205626 FORWARD
Length = 344
Score = 254 bits (650), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 210/341 (61%), Gaps = 12/341 (3%)
Query: 1 MASEREDFSLSGPLHLTVVDWTDAHHRRSVAASLVQGVYILERDRQLKRQGPEALANPWW 60
MAS RE FS SGP + DW + +HR S+ + LVQGVY +ERDRQ R G ++ A PWW
Sbjct: 1 MASRREIFSFSGPPPIPSFDWNNLYHRASLVSCLVQGVYTMERDRQQNRCGSDSKARPWW 60
Query: 61 EFFHFRLLRKLVDDVDSSIFGAIYEFKPPISCSNHSLDKSPRYVIAFRGTVTKPDSFSRD 120
F+ F L ++L D +D SI+GA+++ + +S+ PRY+IA RGT+ P + + D
Sbjct: 61 AFYRFTLYQQLRDALDGSIYGAVFQNDINYQNTPNSI-VPPRYIIALRGTILSPQTMACD 119
Query: 121 LELDIHIIRNGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKTMAKTG 180
++L+I I L+ RF IQA++ VAT G + +W+AGHSLGA +A+LAGK MA G
Sbjct: 120 VQLNIRIAFENLYRGGRFVQAIQAMQYFVATYGNTAIWIAGHSLGAGLALLAGKIMAMYG 179
Query: 181 VLIQAFLFNSPFLSAPIER-IKDKRVKHGLRIAGSVITAGLAFAATVKKNNQNSRSVDPF 239
++A++FN P P+E+ ++ + +K +R+A ++ AG+A + + +++ F
Sbjct: 180 CPVEAYIFNPPISLIPLEQLVESEDLKCAVRLARDILKAGIARVLDLNEGHESHL----F 235
Query: 240 SALSAWIPSIFVNPGDHICSEYIGYFEHRKKMDDIGIGAIERLATQNSIGGLIMGAIGKE 299
L++W P +FVN D ICSEYIGYF HR M+++ +G IERLA + SI ++ G
Sbjct: 236 MNLASWRPHLFVNQSDPICSEYIGYFNHRGDMNELQLGRIERLA-RYSIRRILFGGGESS 294
Query: 300 SEP-----LHLIPSAILTTNLTPSRDFKEAHGIHQWWRPDL 335
S LH +PSAI+ N S DF+ HGIHQWW P L
Sbjct: 295 SSYSSEEHLHFLPSAIVMVNTIISPDFQTDHGIHQWWNPML 335
>AT5G24210.1 | Symbols: | lipase class 3 family protein |
chr5:8217877-8219466 FORWARD
Length = 350
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 194/351 (55%), Gaps = 15/351 (4%)
Query: 2 ASEREDFSLSGPLHLTVVDWTDAHHRRSVAASLVQGVYILERDRQLKRQGPEALANPWWE 61
++ ++ S SGP + DW + +HR +VA+ LVQGVY ERDR+ R G E+LA PWW+
Sbjct: 7 STRSDELSRSGPPQIPNPDWNNLYHRTTVASCLVQGVYAKERDRENNRNGSESLATPWWK 66
Query: 62 FFHFRLLRK--LVDDVDSSIFGAIYEFKPPISCSNHSLDKSPRYVIAFRGTVTKPDSFSR 119
F+F L L D D SI+GA+++ + +S+ PRYVIA RGTV P S
Sbjct: 67 SFNFTLDESEILYDAFDGSIYGAVFQNMINYENTPNSIVVPPRYVIALRGTV--PSDVS- 123
Query: 120 DLELDIHIIRNGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKTMAKT 179
D + I+ LH + I+ I ++VA G + VW+AGHSLGA +A+LAGK MA +
Sbjct: 124 DWIHNSRIVLEKLHGGGKHMHVIRKIYSLVAKHGNTAVWIAGHSLGAGLALLAGKDMAMS 183
Query: 180 GVLIQAFLFNSPFLSAPIERI-KDKRVKHGLRIAGSVITAGLAFAATVKKNNQNSRSVDP 238
G+ ++A++FN P P+E+ + + R+ + AG+A + + + R
Sbjct: 184 GLPVEAYIFNPPISLIPLEQCGYNHELNFVYRLTRDLFKAGIAKVVDLDEGQEGPR---- 239
Query: 239 FSALSAWIPSIFVNPGDHICSEYIGYFEHRKKMDDIGIGAIERLATQNSIGGLIMG---- 294
+ L++W P +FVN D ICSEYIGYF H M + G+G I RLA+ S+ ++ G
Sbjct: 240 YKNLASWRPHLFVNQSDVICSEYIGYFNHVVTMTEAGLGEISRLASGYSVRRMLFGDGEN 299
Query: 295 -AIGKESEPLHLIPSAILTTNLTPSRDFKEAHGIHQWWRPDLDVQSKLYRY 344
+ + LH +PSA + N T + +F HGIHQWW L + Y
Sbjct: 300 WSSSSTPDHLHFLPSAFMIVNKTEASEFYNKHGIHQWWNHMLKQSTTFSSY 350
>AT5G24190.1 | Symbols: | LOCATED IN: cellular_component unknown;
BEST Arabidopsis thaliana protein match is: lipase class
3-related (TAIR:AT5G24180.1); Has 105 Blast hits to 105
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 105; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr5:8199757-8200773 FORWARD
Length = 245
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 131/227 (57%), Gaps = 16/227 (7%)
Query: 120 DLELDIHIIRNGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKTMAKT 179
D++LDI I + LH+ R IQAIR ++ ES +WLAGHSLGAA+ +LAGKTM +
Sbjct: 3 DVKLDIRCILDNLHQGPRTIHAIQAIRAMIDKHSESAIWLAGHSLGAALVLLAGKTMKIS 62
Query: 180 GVLIQAFLFNSPFLSAPIERIKDKRVKHGL-RIAGSVITAGLAFAATVKKNNQNSRSVDP 238
G L+++++FN P +S P+E++ + G+ RI S++ A AATV + R V
Sbjct: 63 GFLLESYIFNPPIISIPLEQLPGGVLLKGVFRITESLVKAT---AATVTMALTDQR-VQE 118
Query: 239 FSALSAWIPSIFVNPGDHICSEYIGYFEHRKKMDDIGIGAIERLATQNSIGGLIMGAIGK 298
S + WIP ++VNP D IC+ YI YF+H+ M IG IER+ +++S IG
Sbjct: 119 DSKTALWIPYLYVNPADPICAGYIDYFKHKIFMSKIGASHIERIGSRSSFRNPWTRRIGT 178
Query: 299 ES-----------EPLHLIPSAILTTNLTPSRDFKEAHGIHQWWRPD 334
S EPLHL+PSA +T N S AHG+HQWW D
Sbjct: 179 SSSSSSPLSDLSMEPLHLLPSADMTVNKNKSASSMAAHGLHQWWEQD 225
>AT5G50890.1 | Symbols: | LOCATED IN: cellular_component unknown;
EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: lipase class 3 family protein (TAIR:AT2G05260.1);
Has 115 Blast hits to 115 proteins in 7 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:20702684-20704235 FORWARD
Length = 408
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 178/374 (47%), Gaps = 66/374 (17%)
Query: 8 FSLSGPLH--------LTVVDWTDAHHRRSVAASLVQGVYILERDRQLKRQGPEALANPW 59
F +SGP + L W D +++R+V A +Q Y+LE DRQ R ALA W
Sbjct: 46 FHVSGPRNVASPNWRDLINSSWKDPNYKRTVMACFIQAAYLLELDRQENRNEQNALAPKW 105
Query: 60 WEFFHFRLLRKLVDDVDSSIFGAIYEFKPPISCSNHSLDK---SPRYVIAFRGTVTKPDS 116
W F ++L + L+D+ D SIFGA+ E+ + ++ + + +P+ V+A RGT+ K +
Sbjct: 106 WIPFKYKLSQTLIDERDGSIFGAVLEWDRAAAMADLVVIRPSGAPKAVLALRGTILKSLT 165
Query: 117 FSRDLELDIHIIR-NGLHETSRFEIGIQAIRNVVATVGESNVWLAGHSLGAAMAMLAGKT 175
RD+E D+ + L + RF + ++A+++V G SNV + GHSLGA A+ GK+
Sbjct: 166 MRRDIEDDLRFLAWESLKGSVRFNVALEALQSVATRYGSSNVCVVGHSLGAGFALQVGKS 225
Query: 176 MAKTGVLIQAFLFNSPFLSAPIERIKDKRVKHGL-----------------------RIA 212
+AK G+ + A LFN P +S + +++ K G+ +++
Sbjct: 226 LAKEGLFVDAHLFNPPSISVAMS-LRNISEKAGVAWKRLMSMLPPKHEPLIQNSNEGQVS 284
Query: 213 GSVITAGL-AFAATVKKNNQNSRSVDPFSALSAWIPSIFVNPGDHICSEYI---GYFEHR 268
S +++G + + +NQ P L W+P ++VN D+IC Y G E R
Sbjct: 285 PSNVSSGFRNWVPSFYGSNQK-----PTVDLRKWVPHLYVNDSDYICCHYTDQDGVAEKR 339
Query: 269 KKMDDIGIGAIERLATQNSIGGLIMGAIGKESEPLHLIPSAILTTNLTPSRDFKEAHGIH 328
+ + + Q + +M GK+ F EAHG+
Sbjct: 340 EMNNKENNSPVVNTNFQAAAKLFVMSK-GKQK--------------------FHEAHGLE 378
Query: 329 QWWRPDLDVQSKLY 342
QWW +L++QS ++
Sbjct: 379 QWWSDNLELQSAIH 392