Jatropha Genome Database

JcCA0139011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0139011.10 - phase: 0 /pseudo/partial
         (244 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27860.1 | Symbols: AXS1 | AXS1 (UDP-D-apiose/UDP-D-xylose sy...   323   6e-89
AT1G08200.1 | Symbols: AXS2 | AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SY...   323   9e-89
AT3G53520.1 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID ...    64   1e-10
AT2G28760.3 | Symbols: UXS6 | NAD-dependent epimerase/dehydratas...    62   4e-10
AT2G28760.1 | Symbols: UXS6 | NAD-dependent epimerase/dehydratas...    62   4e-10
AT2G28760.2 | Symbols: UXS6 | NAD-dependent epimerase/dehydratas...    62   4e-10
AT5G59290.1 | Symbols: UXS3, ATUXS3 | UXS3 (UDP-GLUCURONIC ACID ...    60   9e-10
AT3G46440.2 | Symbols: UXS5 | UXS5; UDP-glucuronate decarboxylas...    60   9e-10
AT3G46440.1 | Symbols: UXS5 | UXS5; UDP-glucuronate decarboxylas...    60   9e-10
AT5G59290.2 | Symbols: UXS3, ATUXS3 | UXS3 (UDP-GLUCURONIC ACID ...    60   1e-09
AT2G47650.1 | Symbols: UXS4 | UXS4 (UDP-XYLOSE SYNTHASE 4); UDP-...    56   2e-08
AT3G62830.2 | Symbols: UXS2, ATUXS2 | AUD1; UDP-glucuronate deca...    56   2e-08
AT3G62830.1 | Symbols: UXS2, ATUXS2, AUD1 | AUD1; UDP-glucuronat...    56   2e-08
AT3G53520.2 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID ...    55   3e-08

>AT2G27860.1 | Symbols: AXS1 | AXS1 (UDP-D-apiose/UDP-D-xylose
           synthase 1); NAD or NADH binding / UDP-glucuronate
           decarboxylase | chr2:11864684-11866843 REVERSE
          Length = 389

 Score =  323 bits (828), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 155/193 (80%), Positives = 170/193 (88%), Gaps = 9/193 (4%)

Query: 1   DPAYYILKEDESPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 60
           DPA+Y+LKED SPCIFG IEKQRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPR
Sbjct: 160 DPAFYVLKEDISPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPR 219

Query: 61  MDFIPGIDGPSEGVPRVLACFSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 120
           MDFIPGIDGPSEGVPRVLACFSN LLRREPLKLVDGG+SQRTFVYI DAIEAVLLMIENP
Sbjct: 220 MDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENP 279

Query: 121 ARASGHIFNVGNPHNEVTVRQLAEMMTEVYSKVSGEAALDVPTVDISSKGIF-------- 172
            RA+GHIFNVGNP+NEVTVRQLAEMMTEVY+KVSGE A++ PTVD+SSK  +        
Sbjct: 280 ERANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSD 339

Query: 173 -MVRDMMIVTKEF 184
             + DM I+ ++ 
Sbjct: 340 KRIPDMTIINRQL 352


>AT1G08200.1 | Symbols: AXS2 | AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE
           SYNTHASE 2); UDP-glucuronate decarboxylase |
           chr1:2574259-2576609 REVERSE
          Length = 389

 Score =  323 bits (827), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 153/193 (79%), Positives = 170/193 (88%), Gaps = 9/193 (4%)

Query: 1   DPAYYILKEDESPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 60
           DP +Y+LKED SPCIFG IEKQRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPR
Sbjct: 160 DPEFYVLKEDISPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPR 219

Query: 61  MDFIPGIDGPSEGVPRVLACFSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 120
           MDFIPGIDGPSEGVPRVLACFSN LLRREPLKLVDGG+SQRTF+YIKDAIEAVLLMIENP
Sbjct: 220 MDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENP 279

Query: 121 ARASGHIFNVGNPHNEVTVRQLAEMMTEVYSKVSGEAALDVPTVDISSKGIF-------- 172
            RA+GHIFNVGNP+NEVTVRQLAEMMTEVY+KVSGE A++ PT+D+SSK  +        
Sbjct: 280 ERANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSD 339

Query: 173 -MVRDMMIVTKEF 184
             + DM I+ ++ 
Sbjct: 340 KRIPDMTIINRQL 352


>AT3G53520.1 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID
           DECARBOXYLASE 1); UDP-glucuronate decarboxylase/
           catalytic | chr3:19841635-19844057 FORWARD
          Length = 435

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 21/132 (15%)

Query: 22  QRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 79
           +R  Y   K+  E L   Y  GA  G+E  I R FN  GPRM    G         RV++
Sbjct: 258 ERSCYDEGKRTAETLAMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVS 306

Query: 80  CFSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHI--FNVGNPHNEV 137
            F    +R+ P+ +   G+  R+F Y+ D +E ++ ++EN      H+  FN+GNP  E 
Sbjct: 307 NFVAQTIRKHPMTVYGDGKQTRSFQYVSDLVEGLVALMEN-----DHVGPFNLGNP-GEF 360

Query: 138 TVRQLAEMMTEV 149
           T+ +LAE++ EV
Sbjct: 361 TMLELAEVVKEV 372


>AT2G28760.3 | Symbols: UXS6 | NAD-dependent epimerase/dehydratase
           family protein | chr2:12336469-12338642 REVERSE
          Length = 343

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  I R FN  GPRM+   G         RV++ F 
Sbjct: 171 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 221

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D +E ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 222 AQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLME--GDQTGPI-NIGNP-GEFTMVEL 277

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 278 AETVKEL 284


>AT2G28760.1 | Symbols: UXS6 | NAD-dependent epimerase/dehydratase
           family protein | chr2:12336469-12338642 REVERSE
          Length = 343

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  I R FN  GPRM+   G         RV++ F 
Sbjct: 171 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 221

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D +E ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 222 AQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLME--GDQTGPI-NIGNP-GEFTMVEL 277

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 278 AETVKEL 284


>AT2G28760.2 | Symbols: UXS6 | NAD-dependent epimerase/dehydratase
           family protein | chr2:12336469-12338642 REVERSE
          Length = 343

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  I R FN  GPRM+   G         RV++ F 
Sbjct: 171 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 221

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D +E ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 222 AQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLME--GDQTGPI-NIGNP-GEFTMVEL 277

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 278 AETVKEL 284


>AT5G59290.1 | Symbols: UXS3, ATUXS3 | UXS3 (UDP-GLUCURONIC ACID
           DECARBOXYLASE 3); UDP-glucuronate decarboxylase/
           catalytic | chr5:23915814-23917953 REVERSE
          Length = 342

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  I R FN  GPRM+   G         RV++ F 
Sbjct: 170 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 220

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D ++ ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 221 AQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLME--GNDTGPI-NIGNP-GEFTMVEL 276

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 277 AETVKEL 283


>AT3G46440.2 | Symbols: UXS5 | UXS5; UDP-glucuronate decarboxylase/
           catalytic | chr3:17089268-17091611 REVERSE
          Length = 341

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  I R FN  GPRM+   G         RV++ F 
Sbjct: 169 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 219

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D ++ ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 220 AQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLME--GDDTGPI-NIGNP-GEFTMVEL 275

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 276 AETVKEL 282


>AT3G46440.1 | Symbols: UXS5 | UXS5; UDP-glucuronate decarboxylase/
           catalytic | chr3:17089268-17091611 REVERSE
          Length = 341

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  I R FN  GPRM+   G         RV++ F 
Sbjct: 169 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 219

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D ++ ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 220 AQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLME--GDDTGPI-NIGNP-GEFTMVEL 275

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 276 AETVKEL 282


>AT5G59290.2 | Symbols: UXS3, ATUXS3 | UXS3 (UDP-GLUCURONIC ACID
           DECARBOXYLASE 3); UDP-glucuronate decarboxylase/
           catalytic | chr5:23915814-23917998 REVERSE
          Length = 357

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  I R FN  GPRM+   G         RV++ F 
Sbjct: 185 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 235

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D ++ ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 236 AQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLME--GNDTGPI-NIGNP-GEFTMVEL 291

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 292 AETVKEL 298


>AT2G47650.1 | Symbols: UXS4 | UXS4 (UDP-XYLOSE SYNTHASE 4);
           UDP-glucuronate decarboxylase/ catalytic |
           chr2:19538751-19541364 REVERSE
          Length = 443

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 21/131 (16%)

Query: 23  RWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 80
           R  Y   K+  E L   Y  GA   +E  I R FN  GPRM    G         RV++ 
Sbjct: 260 RSCYDEGKRTAETLTMDYHRGAN--VEVRIARIFNTYGPRMCIDDG---------RVVSN 308

Query: 81  FSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHI--FNVGNPHNEVT 138
           F    LR+EPL +   G+  R+F ++ D +E ++ ++E       H+  FN+GNP  E T
Sbjct: 309 FVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFT 362

Query: 139 VRQLAEMMTEV 149
           + +LA+++ E 
Sbjct: 363 MLELAKVVQET 373


>AT3G62830.2 | Symbols: UXS2, ATUXS2 | AUD1; UDP-glucuronate
           decarboxylase/ catalytic/ dTDP-glucose 4,6-dehydratase |
           chr3:23232539-23235353 FORWARD
          Length = 445

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 21/131 (16%)

Query: 23  RWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 80
           R  Y   K+  E L   Y  GA   +E  I R FN  GPRM    G         RV++ 
Sbjct: 258 RSCYDEGKRTAETLTMDYHRGAN--VEVRIARIFNTYGPRMCIDDG---------RVVSN 306

Query: 81  FSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHI--FNVGNPHNEVT 138
           F    LR+EPL +   G+  R+F ++ D +E ++ ++E       H+  FN+GNP  E T
Sbjct: 307 FVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFT 360

Query: 139 VRQLAEMMTEV 149
           + +LA+++ E 
Sbjct: 361 MLELAKVVQET 371


>AT3G62830.1 | Symbols: UXS2, ATUXS2, AUD1 | AUD1; UDP-glucuronate
           decarboxylase/ catalytic/ dTDP-glucose 4,6-dehydratase |
           chr3:23232539-23235353 FORWARD
          Length = 445

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 21/131 (16%)

Query: 23  RWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 80
           R  Y   K+  E L   Y  GA   +E  I R FN  GPRM    G         RV++ 
Sbjct: 258 RSCYDEGKRTAETLTMDYHRGAN--VEVRIARIFNTYGPRMCIDDG---------RVVSN 306

Query: 81  FSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHI--FNVGNPHNEVT 138
           F    LR+EPL +   G+  R+F ++ D +E ++ ++E       H+  FN+GNP  E T
Sbjct: 307 FVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFT 360

Query: 139 VRQLAEMMTEV 149
           + +LA+++ E 
Sbjct: 361 MLELAKVVQET 371


>AT3G53520.2 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID
           DECARBOXYLASE 1); UDP-glucuronate decarboxylase/
           catalytic | chr3:19841635-19844057 FORWARD
          Length = 433

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 23/132 (17%)

Query: 22  QRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 79
           +R  Y   K+  E L   Y  GA  G+E  I R FN  GPRM    G         RV++
Sbjct: 258 ERSCYDEGKRTAETLAMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVS 306

Query: 80  CFSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHI--FNVGNPHNEV 137
            F    +R+ P+ +   G+  R+F Y+ D    ++ ++EN      H+  FN+GNP  E 
Sbjct: 307 NFVAQTIRKHPMTVYGDGKQTRSFQYVSDL--GLVALMEN-----DHVGPFNLGNP-GEF 358

Query: 138 TVRQLAEMMTEV 149
           T+ +LAE++ EV
Sbjct: 359 TMLELAEVVKEV 370