Jatropha Genome Database
- JcCA0138491.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0138491.10 + phase: 0 /partial
(407 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33070.1 | Symbols: | pyruvate decarboxylase, putative | chr... 617 e-177
AT5G01320.1 | Symbols: | pyruvate decarboxylase, putative | chr... 607 e-174
AT5G54960.1 | Symbols: PDC2 | PDC2 (pyruvate decarboxylase-2); c... 604 e-173
AT5G01330.1 | Symbols: PDC3 | PDC3 (pyruvate decarboxylase-3); c... 588 e-168
>AT4G33070.1 | Symbols: | pyruvate decarboxylase, putative |
chr4:15952519-15954676 REVERSE
Length = 607
Score = 617 bits (1590), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/389 (75%), Positives = 328/389 (84%), Gaps = 1/389 (0%)
Query: 15 SSVPAS-VAGKTCSGTLGRHLARRLVEIGVSDVFSVPGDFNLTLLDHLIAEPGLNLVGCC 73
+SVP+S + C TLGRHLARRLV+ GV+DVFSVPGDFNLTLLDHL+AEP LNL+GCC
Sbjct: 31 NSVPSSAITINYCDATLGRHLARRLVQAGVTDVFSVPGDFNLTLLDHLMAEPDLNLIGCC 90
Query: 74 NELNXXXXXXXXXXXXXXXXCVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGT 133
NELN CVVTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGT
Sbjct: 91 NELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGT 150
Query: 134 NRILHHTIGLPDFSQELRCFQTVTCFQAVVNNLDDAHEQIDTAISTALKESKPAYISISC 193
NRILHHTIGLPDFSQELRCFQTVTC+QAVVNNLDDAHEQID AISTALKESKP YIS+SC
Sbjct: 151 NRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLDDAHEQIDKAISTALKESKPVYISVSC 210
Query: 194 NLPGIPHPTFAREPVPFCLAPNVSNQLGLEAAVEATAAFLNKAVKPVIVAGPKLRVAKAQ 253
NL IPH TF+R+PVPF LAP +SN++GLEAAVEAT FLNKAVKPV+V GPKLRVAKA
Sbjct: 211 NLAAIPHHTFSRDPVPFSLAPRLSNKMGLEAAVEATLEFLNKAVKPVMVGGPKLRVAKAC 270
Query: 254 KAFVELADASGYPVAVMPSGKGLVPEHHPHFIGTYWGAVSTSFCGEIVESADAYIFIGPI 313
AFVELADASGY +A+MPS KG VPEHHPHFIGTYWGAVST FC EIVESADAYIF GPI
Sbjct: 271 DAFVELADASGYALAMMPSAKGFVPEHHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPI 330
Query: 314 FNDYSSVGYSLLINKEKAVIVQANRVAIGNGPSFGWVFMTEFLSALAKKLRKNSTAMENY 373
FNDYSSVGYSLL+ KEKA++VQ +R+ + NGP+FG + M++F L+K++++N TA ENY
Sbjct: 331 FNDYSSVGYSLLLKKEKAIVVQPDRITVANGPTFGCILMSDFFRELSKRVKRNETAYENY 390
Query: 374 RRIFVPPGLPLKSEKDEPLRVNVLFKHIQ 402
RIFVP G PLK E EPLRVN +F+HIQ
Sbjct: 391 HRIFVPEGKPLKCESREPLRVNTMFQHIQ 419
>AT5G01320.1 | Symbols: | pyruvate decarboxylase, putative |
chr5:129484-131625 REVERSE
Length = 603
Score = 607 bits (1566), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/378 (76%), Positives = 320/378 (84%)
Query: 25 TCSGTLGRHLARRLVEIGVSDVFSVPGDFNLTLLDHLIAEPGLNLVGCCNELNXXXXXXX 84
T TLGRHL+RRLV+ GV+DVFSVPGDFNLTLLDHLIAEP LN +GCCNELN
Sbjct: 38 TSESTLGRHLSRRLVQAGVTDVFSVPGDFNLTLLDHLIAEPELNNIGCCNELNAGYAADG 97
Query: 85 XXXXXXXXXCVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLP 144
CVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSND+GTNRILHHTIGLP
Sbjct: 98 YARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLP 157
Query: 145 DFSQELRCFQTVTCFQAVVNNLDDAHEQIDTAISTALKESKPAYISISCNLPGIPHPTFA 204
DFSQELRCFQTVTC+QAVVNNL+DAHEQID AI+TALKESKP YISISCNL PHPTFA
Sbjct: 158 DFSQELRCFQTVTCYQAVVNNLEDAHEQIDKAIATALKESKPVYISISCNLAATPHPTFA 217
Query: 205 REPVPFCLAPNVSNQLGLEAAVEATAAFLNKAVKPVIVAGPKLRVAKAQKAFVELADASG 264
R+PVPF L P +SN +GLEAAVEAT FLNKAVKPV+V GPKLRVAKA +AF+ELADASG
Sbjct: 218 RDPVPFDLTPRMSNTMGLEAAVEATLEFLNKAVKPVMVGGPKLRVAKASEAFLELADASG 277
Query: 265 YPVAVMPSGKGLVPEHHPHFIGTYWGAVSTSFCGEIVESADAYIFIGPIFNDYSSVGYSL 324
YP+AVMPS KGLVPE+HPHFIGTYWGAVST FC EIVESADAYIF GPIFNDYSSVGYSL
Sbjct: 278 YPLAVMPSTKGLVPENHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSL 337
Query: 325 LINKEKAVIVQANRVAIGNGPSFGWVFMTEFLSALAKKLRKNSTAMENYRRIFVPPGLPL 384
L+ KEKA+IV +RV + NGP+FG V M++F LAK++++N TA ENY RIFVP G PL
Sbjct: 338 LLKKEKAIIVHPDRVVVANGPTFGCVLMSDFFRELAKRVKRNETAYENYERIFVPEGKPL 397
Query: 385 KSEKDEPLRVNVLFKHIQ 402
K + EPLRVN +F+HIQ
Sbjct: 398 KCKPGEPLRVNAMFQHIQ 415
>AT5G54960.1 | Symbols: PDC2 | PDC2 (pyruvate decarboxylase-2);
carboxy-lyase/ catalytic/ magnesium ion binding /
pyruvate decarboxylase/ thiamin pyrophosphate binding |
chr5:22310858-22312681 REVERSE
Length = 607
Score = 604 bits (1557), Expect = e-173, Method: Compositional matrix adjust.
Identities = 294/393 (74%), Positives = 325/393 (82%)
Query: 10 SIAQPSSVPASVAGKTCSGTLGRHLARRLVEIGVSDVFSVPGDFNLTLLDHLIAEPGLNL 69
S Q +S S C TLGR+LARRLVEIGV+DVFSVPGDFNLTLLDHLIAEP L L
Sbjct: 27 STVQNTSPLHSTTVSPCDATLGRYLARRLVEIGVTDVFSVPGDFNLTLLDHLIAEPNLKL 86
Query: 70 VGCCNELNXXXXXXXXXXXXXXXXCVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSN 129
+GCCNELN CVVTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSN
Sbjct: 87 IGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSN 146
Query: 130 DYGTNRILHHTIGLPDFSQELRCFQTVTCFQAVVNNLDDAHEQIDTAISTALKESKPAYI 189
DYGTNRILHHTIGLPDF+QELRCFQ VTCFQAV+NNL++AHE IDTAISTALKESKP YI
Sbjct: 147 DYGTNRILHHTIGLPDFTQELRCFQAVTCFQAVINNLEEAHELIDTAISTALKESKPVYI 206
Query: 190 SISCNLPGIPHPTFAREPVPFCLAPNVSNQLGLEAAVEATAAFLNKAVKPVIVAGPKLRV 249
SISCNLP IP PTF+R PVPF L VSNQ+GL+AAVEA A FLNKAVKPV+V GPK+RV
Sbjct: 207 SISCNLPAIPLPTFSRHPVPFMLPMKVSNQIGLDAAVEAAAEFLNKAVKPVLVGGPKMRV 266
Query: 250 AKAQKAFVELADASGYPVAVMPSGKGLVPEHHPHFIGTYWGAVSTSFCGEIVESADAYIF 309
AKA AFVELADASGY +AVMPS KG VPEHH HFIGTYWGAVST+FC EIVESADAY+F
Sbjct: 267 AKAADAFVELADASGYGLAVMPSAKGQVPEHHKHFIGTYWGAVSTAFCAEIVESADAYLF 326
Query: 310 IGPIFNDYSSVGYSLLINKEKAVIVQANRVAIGNGPSFGWVFMTEFLSALAKKLRKNSTA 369
GPIFNDYSSVGYSLL+ KEKA+IVQ +RV IGNGP+FG V M +FLS LAK+++ N+T+
Sbjct: 327 AGPIFNDYSSVGYSLLLKKEKAIIVQPDRVTIGNGPAFGCVLMKDFLSELAKRIKHNNTS 386
Query: 370 MENYRRIFVPPGLPLKSEKDEPLRVNVLFKHIQ 402
ENY RI+VP G PL+ +E LRVNVLF+HIQ
Sbjct: 387 YENYHRIYVPEGKPLRDNPNESLRVNVLFQHIQ 419
>AT5G01330.1 | Symbols: PDC3 | PDC3 (pyruvate decarboxylase-3);
carboxy-lyase/ catalytic/ magnesium ion binding /
pyruvate decarboxylase/ thiamin pyrophosphate binding /
transferase | chr5:132538-134807 REVERSE
Length = 592
Score = 588 bits (1515), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/398 (71%), Positives = 324/398 (81%), Gaps = 1/398 (0%)
Query: 5 ANQLGSIAQPSSVPASVAGKTCSGTLGRHLARRLVEIGVSDVFSVPGDFNLTLLDHLIAE 64
+N + +I + A++ G + + TLGRHL+RRLV+ GV+D+F+VPGDFNL+LLD LIA
Sbjct: 8 SNGVATIQDSAPTAATILGSS-AATLGRHLSRRLVQAGVTDIFTVPGDFNLSLLDQLIAN 66
Query: 65 PGLNLVGCCNELNXXXXXXXXXXXXXXXXCVVTFTVGGLSVLNAIAGAYSENLPVICIVG 124
P LN +GCCNELN CVVTFTVGGLSVLNAIAGAYSENLPVICIVG
Sbjct: 67 PELNNIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVG 126
Query: 125 GPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCFQAVVNNLDDAHEQIDTAISTALKES 184
GPNSND+GTNRILHHTIGLPDFSQELRCFQTVTC+QAVVN+L+DAHEQID AI+TAL+ES
Sbjct: 127 GPNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNHLEDAHEQIDKAIATALRES 186
Query: 185 KPAYISISCNLPGIPHPTFAREPVPFCLAPNVSNQLGLEAAVEATAAFLNKAVKPVIVAG 244
KP YISISCNL IPHPTFA PVPF L P +SN+ LEAAVEAT FLNKAVKPV+V G
Sbjct: 187 KPVYISISCNLAAIPHPTFASYPVPFDLTPRLSNKDCLEAAVEATLEFLNKAVKPVMVGG 246
Query: 245 PKLRVAKAQKAFVELADASGYPVAVMPSGKGLVPEHHPHFIGTYWGAVSTSFCGEIVESA 304
PKLRVAKA+ AFVELADASGYPVAVMPS KG VPE+HPHFIGTYWGAVST FC EIVESA
Sbjct: 247 PKLRVAKARDAFVELADASGYPVAVMPSAKGFVPENHPHFIGTYWGAVSTLFCSEIVESA 306
Query: 305 DAYIFIGPIFNDYSSVGYSLLINKEKAVIVQANRVAIGNGPSFGWVFMTEFLSALAKKLR 364
DAYIF GPIFNDYSSVGYSLL+ KEKA+IV + V + NGP+FG V M+EF LAK+++
Sbjct: 307 DAYIFAGPIFNDYSSVGYSLLLKKEKAIIVHPDSVVVANGPTFGCVRMSEFFRELAKRVK 366
Query: 365 KNSTAMENYRRIFVPPGLPLKSEKDEPLRVNVLFKHIQ 402
N TA ENY RIFVP G PLK + EPLR+N +F+HIQ
Sbjct: 367 PNKTAYENYHRIFVPEGKPLKCKPREPLRINAMFQHIQ 404